View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21163_high_58 (Length: 262)
Name: NF21163_high_58
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21163_high_58 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 37688372 - 37688608
Alignment:
| Q |
10 |
taagaagtgcgtgcgtgcgtgcttggtacccagggtttttgtgttattccggcgcgagctcgagtgagaaaatgcaagctgcaatgaagcagaaactgaa |
109 |
Q |
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| T |
37688372 |
taagaagtgcgtgcgtgcgtacttggtacccagggtttttgtgttattccggcgcgagctcgagtgagaaaatgcaagctgcaatgaagcagaaactgaa |
37688471 |
T |
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| Q |
110 |
actcctctacaattccaacttcaaatctctctttacactctcatcattcaaatttcattcttattcctctccgctaaactcattaccacattcttccacc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37688472 |
actcctctacaattccaacttcaaatctctctttacactctcatcattcaaatttcattcttattcctctccgctaaactcattaccacattcttccacc |
37688571 |
T |
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| Q |
210 |
gccaccaactccttcaccactccatggtccatcattc |
246 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
37688572 |
gccaccaactccttcaccactccatggtccatcattc |
37688608 |
T |
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