View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21163_high_91 (Length: 207)
Name: NF21163_high_91
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21163_high_91 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 38189425 - 38189603
Alignment:
| Q |
1 |
ttaataaacatgcacaaaccgtctaactaaggcataaggcgaattgaaaagtacataatcaaattaaaatttaaattacaaagaggcaaaagcaactcgc |
100 |
Q |
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| T |
38189425 |
ttaataaacatgcacaaaccgtctaactaaggcataaggcgaattgaaaagtacataatcaaatttaaatttaaattacaaagaggcaaaagcaactcgc |
38189524 |
T |
|
| Q |
101 |
taaacaattatacagagagttttaaatccatgaaaccctaaggggtaaaagcaacttcacattcaccggacactacaag |
179 |
Q |
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| T |
38189525 |
taaacaattatacagagagttttaaatccatgaaaccctaaggggcaaaagcaacttcacattcaccggacactacaag |
38189603 |
T |
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