View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21163_low_21 (Length: 490)
Name: NF21163_low_21
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21163_low_21 |
 | |
|
| [»] scaffold0219 (1 HSPs) |
| | |
|
| [»] scaffold0527 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 349; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 48 - 480
Target Start/End: Complemental strand, 45892880 - 45892449
Alignment:
| Q |
48 |
ggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctg |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45892880 |
ggaaatgaagatggatggtgactttgtttcggcaatgtgattt-gtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctg |
45892782 |
T |
|
| Q |
148 |
gcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtag |
247 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
45892781 |
gcgttgttctgttggatgcatatcttgattcaacatgtctggttttatcctgatgttgctcaaaagggctaggtgcctagatgctccgtgttgacggtag |
45892682 |
T |
|
| Q |
248 |
tactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttgatat |
347 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45892681 |
tagtcgttcatcatacctaaaatattgtatccgtcgtggttgcttcttgcatcgttggtggacaatggtagatttatgtcgtttgttcatcccttgatat |
45892582 |
T |
|
| Q |
348 |
ggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatactttg |
447 |
Q |
| |
|
|| || |||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
45892581 |
tgactgcaactgaagtttcaagaccattgcgactttgtggattcggttcataattggttgttttgactcgaaagggtgtttatggtattttgatactttg |
45892482 |
T |
|
| Q |
448 |
aagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
45892481 |
aagatagttgttggaacttgggttgtttctgtg |
45892449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 45 - 480
Target Start/End: Complemental strand, 12583437 - 12583001
Alignment:
| Q |
45 |
cgtggaaatgaagatgga-tggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagt |
143 |
Q |
| |
|
|||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12583437 |
cgtggagatgaagatggggtggttactttgtttcggctctgtgattttgtctgaaaatcatgaatctggttttctggattaaagatatgggttctttagt |
12583338 |
T |
|
| Q |
144 |
tctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacg |
243 |
Q |
| |
|
| || |||||| |||||||||||||||| |||| |||| || ||||||||| |||||| || ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
12583337 |
tatgttgttgttctgttggatgcatatctcgatttaacacaattggttttatcctaatgttgctcgaaagggctaggtgtgtagatgctccgtgttgacg |
12583238 |
T |
|
| Q |
244 |
gtagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttg |
343 |
Q |
| |
|
|||||| || |||||||||||||||| ||| ||||| |||||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||| ||| |
|
|
| T |
12583237 |
gtagtagtcattcatcatacctaaaagattttatccaccgtggttgcttcttgcattgttggtggacaatgatagatttatgtcgtttgttcatccattg |
12583138 |
T |
|
| Q |
344 |
atatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatac |
443 |
Q |
| |
|
|| |||| || ||||||||||||||||||||||||||||| |||||| |||| ||||||||||| | |||||||||||| | ||||||| | |||||| |
|
|
| T |
12583137 |
atttggactgcgactgaagtttcaagaccactgcgactttatggattcggtttgtaattggttgctctgactcgaaagggcatttatggcctgctgatac |
12583038 |
T |
|
| Q |
444 |
tttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
12583037 |
tttgaagatagctgttgcaacttgggttgtttctgtg |
12583001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 55 - 306
Target Start/End: Original strand, 48665780 - 48666031
Alignment:
| Q |
55 |
aagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctggcgttgt |
154 |
Q |
| |
|
||||||| ||||||||||||||| || ||| |||||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||| |||| |
|
|
| T |
48665780 |
aagatgggtggtgactttgtttccactctgtcattttgtctgaaaatcttgattcttgttttctggattgaaagtatgggttctttagttctggctttgt |
48665879 |
T |
|
| Q |
155 |
tttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgt |
254 |
Q |
| |
|
| ||||||||||||| || ||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
48665880 |
tctgttggatgcatagctcgattcaacatgactggttttatcctgatgttgctcaaaagagctaggtgcgtagatgctccgtgttgacggtagtagtcgt |
48665979 |
T |
|
| Q |
255 |
tcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggt |
306 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
48665980 |
tcatcatacctaaaatattgtatccaccgtggttgcttcttgcatcgttggt |
48666031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 52 - 343
Target Start/End: Original strand, 21801287 - 21801578
Alignment:
| Q |
52 |
atgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctggcgt |
151 |
Q |
| |
|
|||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||| || |
|
|
| T |
21801287 |
atgaagatgggtgatgactttatttcggctctgtgattttgtctgaaaatcttgaatcttgttttctggattgaagacacaggttctttagttctggtgt |
21801386 |
T |
|
| Q |
152 |
tgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtact |
251 |
Q |
| |
|
|||| | |||||||||||||| |||| |||||| ||| |||||||||||||||| || || | ||||||||||||||| |||||||||||| || || | |
|
|
| T |
21801387 |
tgttctattggatgcatatctcgatttaacatgactggttttatcctgatgttgctcgaatgagctaggtgcgtagatgctccgtgttgacaatattagt |
21801486 |
T |
|
| Q |
252 |
cgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttg |
343 |
Q |
| |
|
||||||||||||||||| || ||||| |||||| ||||||||||||||||| | | || |||||||||||||||||||||| ||||| |
|
|
| T |
21801487 |
tgttcatcatacctaaaagatattatcctctatggttgcttcttgcatcgttggtggatattgatagatttatgtcgtttgttcattccttg |
21801578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 401 - 477
Target Start/End: Original strand, 48666027 - 48666103
Alignment:
| Q |
401 |
ttggttgttttgactcgaaaggacgtttatggtattttgatactttgaagatagttgttggaacttgggtcgtttct |
477 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48666027 |
ttggttgttttgattcgaaaggacgtttatggtcttctgatactttgaagatagatgttggaacttgggtcgtttct |
48666103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 53591898 - 53591846
Alignment:
| Q |
196 |
cctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagt |
248 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
53591898 |
cctgatgttgctcgaaagggctaggtgcgtagacgctccgtgttgacgatagt |
53591846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0219 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: scaffold0219
Description:
Target: scaffold0219; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 45 - 480
Target Start/End: Complemental strand, 6133 - 5698
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
6133 |
cgtggaaatgaagatgggtggtgactttgtttcggctctgtgattttgtctgaaaatcttgaatctggttttctggattgaaggtatgggttctttcatt |
6034 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacgg |
244 |
Q |
| |
|
|||| | |||| |||||||||||||||| ||||||||||| ||| || ||||||||||||| || |||||||||||||| ||||| ||| || || || |
|
|
| T |
6033 |
ctggtgctgttatgttggatgcatatctcgattcaacatgactggttgtatcctgatgttgctcgaaagggctaggtgcatagatgatccatgaagatgg |
5934 |
T |
|
| Q |
245 |
tagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttga |
344 |
Q |
| |
|
||| | |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5933 |
tagaagtcgttcatcatacctaaaatattgtatctgtcgtggttgcttcttgcatcattggtggacagtggtagatttatgtcgtttgttcatcccttga |
5834 |
T |
|
| Q |
345 |
tatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatact |
444 |
Q |
| |
|
|||||| | ||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||| |||| ||| | ||||||||| || | ||||| |
|
|
| T |
5833 |
tatggagtctgactgaagtttcaaaaccaccgcgactttatggatttggttcgtaattagttgttttcactcaaaatggtgtttatggtcttctaatact |
5734 |
T |
|
| Q |
445 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5733 |
ttgaagatagttgttggaacttgggttgtttctgtg |
5698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 45 - 480
Target Start/End: Original strand, 36658351 - 36658782
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||| || ||||||||||| |||||||||| | |||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
36658351 |
cgtggagatgaagatgggtggtgactttgtttcgactctgtgattttgtttgaaaatcttaagtctgattttctggattgaaggtatgggttctttagtt |
36658450 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgt-gttgacg |
243 |
Q |
| |
|
|| || |||||||||||||| || ||||||||||| ||| |||||||||||||||| || ||| ||||||||||||||| ||| || ||||| | |
|
|
| T |
36658451 |
ctagc-----attgttggatgcatagctcgattcaacatgactggttttatcctgatgttgctcgaaacagctaggtgcgtagatgctctgtggttgatg |
36658545 |
T |
|
| Q |
244 |
gtagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttg |
343 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| | |||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36658546 |
gtagtagtcgttcatcatacctaaaatattgtatccattgtggtttcttcttgcatcgttgatggacaatggtagatttatgtcgtttgttcttcccttg |
36658645 |
T |
|
| Q |
344 |
atatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatac |
443 |
Q |
| |
|
|| |||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
36658646 |
atctggactgcgactaaagtttcaagaccacagcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtcttctgatac |
36658745 |
T |
|
| Q |
444 |
tttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36658746 |
tttgaagatagttgttggaacttgggtcgtttctgtg |
36658782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 78 - 480
Target Start/End: Original strand, 31266786 - 31267189
Alignment:
| Q |
78 |
ggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatggg-ttctttagttctggcgttgttttgttggatgcatatcttgat |
176 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||||| |||||| ||| |||| |||||||||| ||| |||||| | |||||||||||||| || |
|
|
| T |
31266786 |
ggctttgtgatttggtctgaaaatcttgaagctggttttttggattgaagacctggggttctttagttttggggttgttctattggatgcatatctcgac |
31266885 |
T |
|
| Q |
177 |
tcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacctaaaatattgta |
276 |
Q |
| |
|
|||||||| || ||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||| ||| | |
|
|
| T |
31266886 |
tcaacatgattggttttatcttgatgttgttcgaaagggctaggtgcgtagatgctccgtgttgatagtagtagtcgttcatcgtacctaaaggattttt |
31266985 |
T |
|
| Q |
277 |
tccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttgatatggattgtgactgaagtttcaagaccactg |
376 |
Q |
| |
|
||| | |||||| ||||| | ||||||||| || ||||||| | ||||||| |||||| ||| |||| | |||||||||||||||| ||| |
|
|
| T |
31266986 |
tcctccatggttgcttcttccgtcgttggtgggatgtgatagatttctactgtttgtttatccctcgatctggacttcagctgaagtttcaagaccgctg |
31267085 |
T |
|
| Q |
377 |
cgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatactttgaagatagttgttggaacttgggtcgtttc |
476 |
Q |
| |
|
||| | |||||||| |||||||||||||||| |||| ||| ||||| ||||||||| | ||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
31267086 |
cgaatatgtggattaggttcgtaattggttgctttggctcaaaagggcgtttatggcttgctgatactttgaagggagatgttggaacggaggtcgtttc |
31267185 |
T |
|
| Q |
477 |
tgtg |
480 |
Q |
| |
|
|||| |
|
|
| T |
31267186 |
tgtg |
31267189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 268
Target Start/End: Original strand, 29463752 - 29463950
Alignment:
| Q |
69 |
ctttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctggcgttgttttgttggatgcat |
168 |
Q |
| |
|
|||||||||| || | |||||| ||| || ||||||||| |||||| ||||||| ||| | |||||||||||||| | || |||||||||||||||||| |
|
|
| T |
29463752 |
ctttgtttcgtctctctgatttgatctaaatatcttgaatttggttt-ctggattgaagatctgggttctttagttttagcattgttttgttggatgcat |
29463850 |
T |
|
| Q |
169 |
atcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacctaaa |
268 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| ||||| || ||| ||||||||||||||| | || ||||||| |||| | ||||||||| | |||||| |
|
|
| T |
29463851 |
atctcgattcaacatgactgattttatcctaatgttactcgaaatagctaggtgcgtagattccccatgttgacagtagcagtcgttcatcgttcctaaa |
29463950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 13135789 - 13135729
Alignment:
| Q |
199 |
gatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatc |
259 |
Q |
| |
|
|||||||||| |||| |||| ||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
13135789 |
gatgttgttcgaaagagctatgtgcgtagaagctccgtgttgacggtagtagtcgttcatc |
13135729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 42236738 - 42236670
Alignment:
| Q |
210 |
aaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacctaaaatattgtatc |
278 |
Q |
| |
|
|||| ||||||||||||||| |||| ||||||||||||| |||||| || ||||| || |||||||| |
|
|
| T |
42236738 |
aaagagctaggtgcgtagatgctccatgttgacggtagtcgtcgttcgtcgtaccttaagaattgtatc |
42236670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0527 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: scaffold0527
Description:
Target: scaffold0527; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 45 - 480
Target Start/End: Complemental strand, 3524 - 3107
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| || |
|
|
| T |
3524 |
cgtggaaatgaagatgggtggtgactttgtttcggctatgagattttgtctaaaaatcttgaatctggttttctggattgaaggtatgggttccttaatt |
3425 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacgg |
244 |
Q |
| |
|
|| | |||||| |||||||||||||||| |||||||||| ||| |||||||||||||||| || |||||||||||||| ||||| ||||||| |||| | |
|
|
| T |
3424 |
cttgtgttgttatgttggatgcatatctctattcaacatgactggttttatcctgatgttgctcgaaagggctaggtgcatagatgctccgtgatgactg |
3325 |
T |
|
| Q |
245 |
tagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttga |
344 |
Q |
| |
|
||||||| ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3324 |
tagtactagttcatcatacctaaaata------------------tatattgtatcgttggtggacaatggtagatttatgtcgtttgttcatcccttga |
3243 |
T |
|
| Q |
345 |
tatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatact |
444 |
Q |
| |
|
| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || ||||||| |
|
|
| T |
3242 |
tctggactgcgactgaagtttcaagaccactgcgactttgtggattcggttcgtaattggttgttttgactcgaaagtgcgtttatggtcttctgatact |
3143 |
T |
|
| Q |
445 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
3142 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
3107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0527; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 45 - 480
Target Start/End: Complemental strand, 11587 - 11170
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| || |
|
|
| T |
11587 |
cgtggaaatgaagatgggtggtgactttgtttcggctatgagattttgtctaaaaatcttgaatctggttttctggattgaaggtatgggttccttaatt |
11488 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacgg |
244 |
Q |
| |
|
|| | |||||| |||||||||||||||| |||||||||| ||| |||||||||||||||| || |||||||||||||| ||||| ||||||| |||| | |
|
|
| T |
11487 |
cttgtgttgttatgttggatgcatatctctattcaacatgactggttttatcctgatgttgctcgaaagggctaggtgcatagatgctccgtgatgactg |
11388 |
T |
|
| Q |
245 |
tagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttga |
344 |
Q |
| |
|
||||||| ||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11387 |
tagtactagttcatcatacctaaaata------------------tatattgtatcgttggtggacaatggtagatttatgtcgtttgttcatcccttga |
11306 |
T |
|
| Q |
345 |
tatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatact |
444 |
Q |
| |
|
| |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || ||||||| |
|
|
| T |
11305 |
tctggactgcgactgaagtttcaagaccactgcgactttgtggattcggttcgtaattggttgttttgactcgaaagtgcgtttatggtcttctgatact |
11206 |
T |
|
| Q |
445 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
11205 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
11170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 46 - 480
Target Start/End: Original strand, 23773364 - 23773798
Alignment:
| Q |
46 |
gtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggatta-aaggtatgggttcttt-agt |
143 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||| ||| |
|
|
| T |
23773364 |
gtggaaatgaagatgagtggtgaatttgtttcggctctgtgattttgtctaaaaatcttgaatctggttttctggatttgaagatatgggtttttttagt |
23773463 |
T |
|
| Q |
144 |
tctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacg |
243 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||| ||| ||||||| | ||||| || ||| ||||||||| |||||| ||| ||||||||| |
|
|
| T |
23773464 |
tctggcattgttttgttggatgcatatctcgattcaacatgactggttttatcataatgttctttgaaacggctaggtgtgtagatgctctgtgttgacg |
23773563 |
T |
|
| Q |
244 |
gtagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttg |
343 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||| ||||||||||||||| |||||||||| |||||| ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
23773564 |
gtagta-tcgttaatcattcctaaaatattttatccgtcgtggttgcttcttgcatcattggtggacagtggtagattaatgtcgtttgttcatcccttg |
23773662 |
T |
|
| Q |
344 |
atatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatac |
443 |
Q |
| |
|
|| |||| || | ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| | ||||||||| || |||||| |
|
|
| T |
23773663 |
atctggactgcgcctgaagtttcaagaccactgcgattttgtggattcggttcgtaattggttgctttgaatcgaaacggtgtttatggtcttctgatac |
23773762 |
T |
|
| Q |
444 |
tttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23773763 |
-ttgaagatagttgttggaacttgggtcaattctgtg |
23773798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 26470191 - 26470492
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctga--aaatcttgaatctggttttctggattaaaggtatgggttctttag |
142 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
26470191 |
cgtggaaatgaagatgggtggtgactttgtttcgactatgtgattttttttttttaaatcttgaatctggttttctggattgaagatatgggttctttag |
26470290 |
T |
|
| Q |
143 |
ttctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgac |
242 |
Q |
| |
|
|| |||| || ||||||||||||||||||| ||||||||||| ||| ||||||||| ||||| || |||||||||||||||||||| |||| ||||||| |
|
|
| T |
26470291 |
ttttggcattcttttgttggatgcatatctcgattcaacatgactggttttatcctaatgttcctcgaaagggctaggtgcgtagatgctccatgttgac |
26470390 |
T |
|
| Q |
243 |
ggtagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatccctt |
342 |
Q |
| |
|
||| ||| ||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
26470391 |
ggttgta-tcgttcatcatacgtaaaatattttatccgacgtggttgcttcttgcatcgttggtggacagtggtagatttatgtcgtttgttcatccctt |
26470489 |
T |
|
| Q |
343 |
gat |
345 |
Q |
| |
|
||| |
|
|
| T |
26470490 |
gat |
26470492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 26546631 - 26546932
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctga--aaatcttgaatctggttttctggattaaaggtatgggttctttag |
142 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
26546631 |
cgtggaaatgaagatgggtggtgactttgtttcgactatgtgattttttttttttaaatcttgaatctggttttctggattgaagatatgggttctttag |
26546730 |
T |
|
| Q |
143 |
ttctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgac |
242 |
Q |
| |
|
|| |||| || ||||||||||||||||||| ||||||||||| ||| ||||||||| ||||| || |||||||||||||||||||| |||| ||||||| |
|
|
| T |
26546731 |
ttttggcattcttttgttggatgcatatctcgattcaacatgactggttttatcctaatgttcctcgaaagggctaggtgcgtagatgctccatgttgac |
26546830 |
T |
|
| Q |
243 |
ggtagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatccctt |
342 |
Q |
| |
|
||| ||| ||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
26546831 |
ggttgta-tcgttcatcatacgtaaaatattttatccgacgtggttgcttcttgcatcgttggtggacagtggtagatttatgtcgtttgttcatccctt |
26546929 |
T |
|
| Q |
343 |
gat |
345 |
Q |
| |
|
||| |
|
|
| T |
26546930 |
gat |
26546932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 45 - 480
Target Start/End: Original strand, 12119848 - 12120275
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
|||||| ||||| |||| ||||| ||||||| ||| | | |||||| ||| ||||||||||||||||||| |||||| | | |||||||||||||||| |
|
|
| T |
12119848 |
cgtggagatgaaaatgggtggtggctttgttccgg-tctttgatttggtcagaaaatcttgaatctggttcaatggattgacgatatgggttctttagtt |
12119946 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacgg |
244 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| |||||| | | |||||||||||||||| || ||||||||||||| |||||| || |||||||||| |
|
|
| T |
12119947 |
ttggcgttgttttgttgaatgcatatctcgattgaacatgacaggttttatcctgatgttgctcgaaagggctaggtgtgtagatgttctgtgttgacgg |
12120046 |
T |
|
| Q |
245 |
tagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttga |
344 |
Q |
| |
|
||||| || ||||||||||||||| ||| ||| |||||||||| ||||||| || |||||| || || |||||||| |||||||||||||| |
|
|
| T |
12120047 |
tagtagtcattcatcatacctaaaggattttatttgtcgtggttgcttcttgcgtctttggtggactgtgatagattta-------tgttcatcccttga |
12120139 |
T |
|
| Q |
345 |
tatggattgtgactgaagtttcaagaccactgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatact |
444 |
Q |
| |
|
| | ||||| || |||||||||||||| ||||||||| |||||||||||||| |||||||||| ||| || |||| | ||||||||| | ||||||| |
|
|
| T |
12120140 |
tcttgattgcgattgaagtttcaagactactgcgactctgtggatttggttcataattggttgagttggcttgaaaaggcgtttatggcttgctgatact |
12120239 |
T |
|
| Q |
445 |
ttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
|||||| || |||||||||||||||| ||| |||| |
|
|
| T |
12120240 |
ttgaagcgagatgttggaacttgggtcatttatgtg |
12120275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 158; Significance: 7e-84; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 46 - 271
Target Start/End: Original strand, 23661241 - 23661466
Alignment:
| Q |
46 |
gtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttc |
145 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
23661241 |
gtggaaatgaagatgggtggtgaatttgtttcggctatgtgattttgtctgaaaatattgaatctggttttctggattgaatatatgggttctttagttc |
23661340 |
T |
|
| Q |
146 |
tggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggt |
245 |
Q |
| |
|
||| |||||| ||| |||| ||||||| ||||||||||| ||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
23661341 |
tggtgttgttctgtaggattcatatctcgattcaacatgactggttttatcctgatgttgctcgaaagggctaggtgcgtagatgctccgtgttgacggt |
23661440 |
T |
|
| Q |
246 |
agtactcgttcatcatacctaaaata |
271 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
23661441 |
agtagtcgttcatcatacctaaaata |
23661466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 477
Target Start/End: Complemental strand, 10578555 - 10578475
Alignment:
| Q |
397 |
gtaattggttgttttgactcgaaaggacgtttatggtattttgatactttgaagatagttgttggaacttgggtcgtttct |
477 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||| | ||| ||||||||| |||||||||||||| ||||||||| |
|
|
| T |
10578555 |
gtaattggttgttttggctcgaaagggcgtttatggtttagtgagactttgaagggagttgttggaactttagtcgtttct |
10578475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 20490093 - 20490040
Alignment:
| Q |
212 |
agggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacct |
265 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| |||||| || ||||| |
|
|
| T |
20490093 |
agggctaggtgcgtagatactccatgttgccggtagttatcgttcgtcgtacct |
20490040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 150; Significance: 4e-79; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 45 - 321
Target Start/End: Complemental strand, 6000114 - 5999841
Alignment:
| Q |
45 |
cgtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagtt |
144 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||| ||| |||||||||||||||| |
|
|
| T |
6000114 |
cgtggaaatgaagatgggtggtgactttgtttcggctctgtgattttgtctaaaaatctcgaatctggttttttggattgaagatatgggttctttagtt |
6000015 |
T |
|
| Q |
145 |
ctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacgg |
244 |
Q |
| |
|
||||| | |||| ||||||||||||| ||||||||||| ||| ||||||| | | ||| || |||||||||||||||||||| ||| |||||||||| |
|
|
| T |
6000014 |
ctggc--ttctttgatggatgcatatctcgattcaacatgactggttttatcttaaggttcctcgaaagggctaggtgcgtagatgctctgtgttgacgg |
5999917 |
T |
|
| Q |
245 |
tagtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatt |
321 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |||| |||| |
|
|
| T |
5999916 |
tagta-tcgttcatcatacctaaaatattttatccatcgtggttgcttcttgcatcgttggtggacagtggttgatt |
5999841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 23779962 - 23780014
Alignment:
| Q |
196 |
cctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagt |
248 |
Q |
| |
|
|||||||||| || |||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
23779962 |
cctgatgttgctcgaaagggttaggtgcgtagacgctccgtgttgacggtagt |
23780014 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 46 - 338
Target Start/End: Complemental strand, 16178892 - 16178600
Alignment:
| Q |
46 |
gtggaaatgaagatggatggtgactttgtttcggctatgtgattttgtctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttc |
145 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||||||||||||| || ||||||||||||||||| ||||||| ||||| | ||||||||||||| || |
|
|
| T |
16178892 |
gtggagatgaagatgggtggtggctttgtttcggctatgtgatttggtatgaaaatcttgaatctgattttctgaattaatgatatgggttctttattta |
16178793 |
T |
|
| Q |
146 |
tggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggt |
245 |
Q |
| |
|
|| |||||| |||||||||||||||| ||||||||||| ||| ||||||||| |||||| | |||||| ||| ||||||||| | ||||||||| ||| |
|
|
| T |
16178792 |
gggtgttgttctgttggatgcatatctcgattcaacatgactgcttttatcctaatgttgcttgaaagggttagttgcgtagatgccccgtgttgatggt |
16178693 |
T |
|
| Q |
246 |
agtactcgttcatcatacctaaaatattgtatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatc |
338 |
Q |
| |
|
|||| ||||||||| |||||||| |||| ||||| ||||||| || ||| ||| |||||| |||||| || |||||| | ||||||||||| |
|
|
| T |
16178692 |
agtagtcgttcatcgtacctaaagtattttatccaccgtggtttctttttgtatcattggtggacaatgatatatttatattgtttgttcatc |
16178600 |
T |
|
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Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 55 - 268
Target Start/End: Complemental strand, 32538232 - 32538018
Alignment:
| Q |
55 |
aagatggatggtgactttgtttcggctatgtgattttg-tctgaaaatcttgaatctggttttctggattaaaggtatgggttctttagttctggcgttg |
153 |
Q |
| |
|
||||||| ||||| |||||| ||||| |||||||||| |||||||||||||||| || |||| | ||| ||| || ||||||||||||| ||| |||| |
|
|
| T |
32538232 |
aagatgggtggtggatttgttccggctctgtgattttggtctgaaaatcttgaatttgatttttcgaattgaagatacgggttctttagttatggggttg |
32538133 |
T |
|
| Q |
154 |
ttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcg |
253 |
Q |
| |
|
|| |||||||||||||||| |||||||||| || ||||||| |||||||| || |||||||||||||| ||||| ||||||||||||||||| || |
|
|
| T |
32538132 |
ttctgttggatgcatatctagattcaacataattggttttatcttgatgttgctcgaaagggctaggtgcatagatgctccgtgttgacggtaggggtca |
32538033 |
T |
|
| Q |
254 |
ttcatcatacctaaa |
268 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
32538032 |
ttcatcgtacctaaa |
32538018 |
T |
|
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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 35247443 - 35247539
Alignment:
| Q |
169 |
atcttgattcaacatgtctgattttatcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacct |
265 |
Q |
| |
|
|||| |||||||| |||| || || |||||| |||| || |||| ||||||||||||||| |||||||||||||||||| |||||| || ||||| |
|
|
| T |
35247443 |
atctggattcaacgagtcttatgttctcctgaggttgctcgaaagagctaggtgcgtagatgctccgtgttgacggtagttgtcgttcgtcgtacct |
35247539 |
T |
|
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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 480
Target Start/End: Complemental strand, 32537901 - 32537808
Alignment:
| Q |
387 |
gatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatactttgaagatagttgttggaacttgggtcgtttctgtg |
480 |
Q |
| |
|
|||| ||||||||| |||||| |||| |||||||| ||||||||| | |||||||||||||| || ||||| ||||| |||||||| |||| |
|
|
| T |
32537901 |
gattaggttcgtaactggttgctttggatcgaaagggcgtttatggcttgttgatactttgaagggagatgttgaaacttcggtcgtttatgtg |
32537808 |
T |
|
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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 1954086 - 1954139
Alignment:
| Q |
195 |
tcctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagt |
248 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
1954086 |
tcctaatgttgctcgaaagggctaggtgcgtagacgctctgtgttgacggtagt |
1954139 |
T |
|
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Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 275 - 450
Target Start/End: Original strand, 923871 - 924046
Alignment:
| Q |
275 |
tatccgtcgtggttgtttcttgcatcgttggtgcacaatggtagatttatgtcgtttgttcatcccttgatatggattgtgactgaagtttcaagaccac |
374 |
Q |
| |
|
||||||||||||||| ||| ||| | ||||||| ||| || ||||||||||| |||||||||||||| ||| | || ||| ||| ||||||||||||||| |
|
|
| T |
923871 |
tatccgtcgtggttgcttcgtgcgttgttggtggacagtgatagatttatgttgtttgttcatccctcgatctcgaatgtaactaaagtttcaagaccac |
923970 |
T |
|
| Q |
375 |
tgcgactttgtggatttggttcgtaattggttgttttgactcgaaaggacgtttatggtattttgatactttgaag |
450 |
Q |
| |
|
|| | ||||||||||| | ||| |||||||||| |||| ||| ||||| |||||| | |||||||||||||||| |
|
|
| T |
923971 |
tgtgtctttgtggattcgattcataattggttgctttggctcaaaagggtgtttatagccttttgatactttgaag |
924046 |
T |
|
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Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 923773 - 923862
Alignment:
| Q |
129 |
tatgggttctttagttctggcgttgttttgttggatgcatatcttgattcaacatgtctgattttatcctgatgttgttcaaaagggcta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||| |||| || ||| ||||| |
|
|
| T |
923773 |
tatgggttctttagttctggcgttgttttgttggatgcatatttcgattcaacatgattggttttatcctgaagttgatcgaaatggcta |
923862 |
T |
|
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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 347082 - 347013
Alignment:
| Q |
196 |
cctgatgttgttcaaaagggctaggtgcgtagatactccgtgttgacggtagtactcgttcatcatacct |
265 |
Q |
| |
|
||||| |||| || |||| ||||||||||||||| ||| |||||||||||||| |||||| |||||||| |
|
|
| T |
347082 |
cctgaggttgctcgaaagagctaggtgcgtagatgctctgtgttgacggtagttgtcgttcgtcatacct |
347013 |
T |
|
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