View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21163_low_52 (Length: 299)
Name: NF21163_low_52
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21163_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 5 - 284
Target Start/End: Original strand, 48286786 - 48287061
Alignment:
| Q |
5 |
gagaagcaaaggaggaagttgaaaagtgcttttagtagtaaagctttggtgcctagtgttgaggtgaaaacaagaacgagtgttagggttcaaggttgga |
104 |
Q |
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| T |
48286786 |
gagaaacaaaggaggaagttgaaaagtgcttttagtagtaaagctttggtgcctagtgttgaggtgaaaacaagaacgagtgttagggttcaaggttgga |
48286885 |
T |
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| Q |
105 |
aatccatgatggttggtgttactgttgtttgtggtgatgttactttgagacagattcaaaatggtgacatgcctccttgttccttcactgtattcaaatg |
204 |
Q |
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| T |
48286886 |
aatccatgatgattggtgttactgttgtttgtggtgatgttactttgagacagattcaaaatggtgacatgcctccttgttccttcactgtattcaaatg |
48286985 |
T |
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| Q |
205 |
gtaatgcatggtaacgccataactattctatctatgttatatgatgaccctcttcatcgatcacttttttagttaataat |
284 |
Q |
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| T |
48286986 |
gtaatgcatggtaacgccataactattctatctatgttatatgatgaccctcttc----atcacttgtttagttaataat |
48287061 |
T |
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