View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21163_low_64 (Length: 254)
Name: NF21163_low_64
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21163_low_64 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 32195984 - 32195759
Alignment:
| Q |
18 |
agtcttaactgtaaatatacctgtagatttcagcatgcttaggctttggattaaatctgcgtcccacattttagagtccgcacgcaacaactctgctact |
117 |
Q |
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| T |
32195984 |
agtcttaactgtaaatatacctgtagatttcagcatgcttaggctttggattaaatctgcgtcccacattttagagtccgcacgcaacaactctgctact |
32195885 |
T |
|
| Q |
118 |
ttcaaattaacatttatgggatatgttaatgctttcagtttgttcccattcgacctattaatccagttctcagatcacacaaaaatattctctccttttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32195884 |
ttcaaattaacatttatgggatatgttaatgctttcagtttgttcccattcgacctattaatccagttctcagatcacacaaaaatattctctccttttc |
32195785 |
T |
|
| Q |
218 |
ctatattccattgtaaattttccttt |
243 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
32195784 |
ctatattccattgtaaattttccttt |
32195759 |
T |
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