View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21164_low_15 (Length: 251)
Name: NF21164_low_15
Description: NF21164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21164_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 12358944 - 12359182
Alignment:
| Q |
1 |
tgaatgtttatgccagccgtcagatctgatgaaacctgcaaagttcctacaactatgctgccgtattgagaaggtagaaaacgaccactgaggtgatgac |
100 |
Q |
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| T |
12358944 |
tgaaggtttatgtcagccgtcagatctgatgaaacctgcaaagttcctacaactatgctgccgtattgagaaggtagaaaacgaccactgaggtgatgac |
12359043 |
T |
|
| Q |
101 |
tggtttgaaggccttgttttcatccataaaaattatcttattgttattatgcgtcgtcgttttaaatttttg-ttgnnnnnnnagtagctcgagacattg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |
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| T |
12359044 |
tggtttgaaggccttgttttcatccataaaaattatcttattgttattatgcgtcgtcgttttaaatttttgtttgtttttttagtagctcgagacattg |
12359143 |
T |
|
| Q |
200 |
tttgcatgaaaaagttgcagtgtggagggtccatgttag |
238 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
12359144 |
tttgcatgaaaaagttgcagtgtggagggtccatgttag |
12359182 |
T |
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