View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21165_low_31 (Length: 367)
Name: NF21165_low_31
Description: NF21165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21165_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 10 - 349
Target Start/End: Original strand, 47128085 - 47128424
Alignment:
| Q |
10 |
gcagagattaggaagttgggtattgaaacacaactatgggatgaatctcgcaaagaattggaacaagaaactaacaattccaaagcgctgagtcgctctg |
109 |
Q |
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| T |
47128085 |
gcagagattaggaagttgggtattgaaacacaactatgggatgaatctcgcaaagaattggaacaagaaactaacaattccaaagcgctgagtcgttctg |
47128184 |
T |
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| Q |
110 |
acttttgatgatgatagacaactaaaataggnnnnnnnnnnnnnnnnnnnnatcctttcacatacaattctaaggtgaagttgtctatcacaaagtcttg |
209 |
Q |
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| T |
47128185 |
acttttgatgatgatagacaactaaaatagg-ttttttctttcaattttttatcctttcacatacaattctaaggtgaagttgtctatcacaaagtcttg |
47128283 |
T |
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| Q |
210 |
gatgaataggttacatcttttaagtgtattatattttgtagaaacaatgttctcaatttttatgatgttgt-nnnnnnnntacaatgttaataatagatt |
308 |
Q |
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| T |
47128284 |
gatgaataggttacatcttttaagtgtattatattttgtagaaacaatgttctcaatttttatgatgttgtaaaaaaaaatacaatgttaataatagatt |
47128383 |
T |
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| Q |
309 |
agaatcatattatatttttctttaagaattgcagtttatac |
349 |
Q |
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| T |
47128384 |
acaatcatattatatttttctttaagaattgcagtttatac |
47128424 |
T |
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