View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21166_high_10 (Length: 259)
Name: NF21166_high_10
Description: NF21166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21166_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 40626747 - 40626979
Alignment:
| Q |
12 |
aatactttcgaacatatttttgaaagggtggacgaagcgttatatcaaaagtgagcgagggtgcgcttgatttgtagaaaatatggaattcaatggtaca |
111 |
Q |
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| T |
40626747 |
aatactttcgaacatatttttgaaagggtggacaaagcgttatatcaaaagtgagcgaggatgcgcttgatttgtagaaaatatggaattcaatggtaca |
40626846 |
T |
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| Q |
112 |
acttgatttaaaactattcatgatacaagacataatggagggtaagaaatcggacaaaaactaagatttttgttgctacaatgagacaacttttgtccca |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40626847 |
acttgatttaaaactattcatgatacaagacataatggagggtaagaaattggacaaaaactaagatttttgttgctacaatgagacaacttttgtccca |
40626946 |
T |
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| Q |
212 |
aatacaaatatgtaaactaccaaactaaatttt |
244 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
40626947 |
aatacaaatatgtaaactaccaaactaaatttt |
40626979 |
T |
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