View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21167_low_19 (Length: 252)
Name: NF21167_low_19
Description: NF21167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21167_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 35835702 - 35835930
Alignment:
| Q |
18 |
aaatcattgtacaaaatttggcaaggtttaactgtaaatagaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgtta |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35835702 |
aaatcattgtacaaaatttggcaaggtttaactgtaaatagaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgtta |
35835801 |
T |
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| Q |
118 |
caaaggaaagcaaaaataaatgcagcagttggtacaaagataacatcagggtctctcat-tttctatgaatccttccttacaacccttccctcaacaaat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35835802 |
caaaggaaagcaaaaataaatgcagcagttggtacaaagataacatcagggtctctcatccttctatgaatccttccttacaacccttccctcaacaaat |
35835901 |
T |
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| Q |
217 |
acataaccaagctcagtatcttcttctca |
245 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
35835902 |
acataaccaagctcagtatcttcttctca |
35835930 |
T |
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