View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21169_low_2 (Length: 549)

Name: NF21169_low_2
Description: NF21169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21169_low_2
NF21169_low_2
[»] chr1 (2 HSPs)
chr1 (104-531)||(48492251-48492679)
chr1 (12-44)||(48492739-48492771)
[»] chr7 (11 HSPs)
chr7 (104-399)||(32635947-32636244)
chr7 (338-531)||(44370970-44371163)
chr7 (338-531)||(44379824-44380017)
chr7 (338-531)||(23559402-23559595)
chr7 (247-320)||(23559849-23559926)
chr7 (247-320)||(44370639-44370716)
chr7 (247-320)||(44379493-44379570)
chr7 (104-175)||(23559924-23559993)
chr7 (104-175)||(44370572-44370641)
chr7 (104-175)||(44379426-44379495)
chr7 (12-44)||(44554840-44554872)
[»] chr5 (6 HSPs)
chr5 (338-531)||(19907548-19907741)
chr5 (338-531)||(27692493-27692686)
chr5 (250-320)||(19907315-19907385)
chr5 (239-320)||(27692154-27692239)
chr5 (106-175)||(19907232-19907299)
chr5 (104-170)||(27692107-27692171)
[»] chr6 (3 HSPs)
chr6 (338-531)||(20714357-20714550)
chr6 (247-320)||(20714026-20714103)
chr6 (104-175)||(20713959-20714028)
[»] chr4 (4 HSPs)
chr4 (338-531)||(49227694-49227887)
chr4 (338-411)||(15857343-15857416)
chr4 (247-320)||(49227363-49227440)
chr4 (104-175)||(49227296-49227365)
[»] scaffold0148 (1 HSPs)
scaffold0148 (12-42)||(15924-15954)


Alignment Details
Target: chr1 (Bit Score: 350; Significance: 0; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 104 - 531
Target Start/End: Complemental strand, 48492679 - 48492251
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctcatgtttttcttgtattatcagatggatt 203  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48492679 gctaaagtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctcatgtttttcttgtattatcagatggatt 48492580  T
Q  204 ttttactaatatgagggttaattgatcaattttttactaacagctctaattcttagcttgattctaattattatggattgtttactagtctttgttttgt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48492579 ttttactaatatgagggttaattgatcaattttttactaacagctctaattcttagcttgattctaattattatggattgtttactactctttgttttgt 48492480  T
Q  304 gttcttagacaatgtgcnnnnnnnnaataacttgcttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatt 403  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48492479 gttcttagacaatgtgcttttttttaataacttgcttgtgatctttttagtcagatatacagggataattctagaaataggttgttagtttttggtgatt 48492380  T
Q  404 tcgatttgattttgggtcaagctg-nnnnnnnnntggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggctt 502  Q
    ||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48492379 tcgatttgattttgggtcaagctgaaaaaaaaaatggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggctt 48492280  T
Q  503 aattgatttgggctatattggggatattt 531  Q
    || || |||||||||||||||||||||||    
T  48492279 aactggtttgggctatattggggatattt 48492251  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 48492771 - 48492739
Alignment:
Q  12 atgaaaacaacaaataagttagaggaccaaagg 44  Q
    |||||||||||||||||||||||||||||||||    
T  48492771 atgaaaacaacaaataagttagaggaccaaagg 48492739  T

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Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 104 - 399
Target Start/End: Original strand, 32635947 - 32636244
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctcatgtttttcttgtattatcagatggatt 203  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  32635947 gctaatgtgagggttaatatgaggaatcagaatcttatgtgactcagtgactaacagctctaattctattcaatgtttttcttgtattatcagatggatt 32636046  T
Q  204 tttta--ctaatatgagggttaattgatcaattttttactaacagctctaattcttagcttgattctaattattatggattgtttactagtctttgtttt 301  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  32636047 ttttttgctaatatgagggttaattgatcaattttttactaacagctctaattcttggcttgattctaattattatggattgtttactactatttgtttt 32636146  T
Q  302 gtgttcttagacaatgtgcnnnnnnnnaataacttgcttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggt 399  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  32636147 gtgttcttagacaatgtgcttttttttaataacttgcttgtgatctttttagtcagctatacagtgataattctagaaataggttgttagtttttggt 32636244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 44370970 - 44371163
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  44370970 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 44371069  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||    
T  44371070 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgagctacattggggatattt 44371163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 44379824 - 44380017
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  44379824 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 44379923  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||    
T  44379924 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgagctacattggggatattt 44380017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 338 - 531
Target Start/End: Complemental strand, 23559595 - 23559402
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  23559595 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 23559496  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| | | ||||||| | ||||||| |||| |||||||||||||    
T  23559495 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcggcgtggctttaatgatttgagctacattggggatattt 23559402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 23559926 - 23559849
Alignment:
Q  247 ctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  23559926 ctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 23559849  T

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Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 44370639 - 44370716
Alignment:
Q  247 ctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  44370639 ctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 44370716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 44379493 - 44379570
Alignment:
Q  247 ctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  44379493 ctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 44379570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 23559993 - 23559924
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||| |||||||||| |||||||||||||||    
T  23559993 gctaatgtgagggttaatacgaggaatctgaatctt--gtgactcggtgactaacatctctaattctatctc 23559924  T

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Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 44370572 - 44370641
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||| |||||||||| |||||||||||||||    
T  44370572 gctaatgtgagggttaatacgaggaatctgaatctt--gtgactcggtgactaacatctctaattctatctc 44370641  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 44379426 - 44379495
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||||  |||||||| ||||||  |||||||| |||||||||| ||||||||| |||||    
T  44379426 gctaatgtgagggttaatacgaggaatctgaatct--tgtgactcggtgactaacatctctaattccatctc 44379495  T

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Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 44554840 - 44554872
Alignment:
Q  12 atgaaaacaacaaataagttagaggaccaaagg 44  Q
    |||||||||||||||||||||||||||||||||    
T  44554840 atgaaaacaacaaataagttagaggaccaaagg 44554872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 19907548 - 19907741
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||||||||||| ||||| ||||| |||||||||         |    
T  19907548 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttggtgatttcaatttggttttgtgtcaagctgggaaaaaaat 19907647  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | |||||||||||| |||||||||||||    
T  19907648 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgggctacattggggatattt 19907741  T

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Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 27692493 - 27692686
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  27692493 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 27692592  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||    
T  27692593 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgagctacattggggatattt 27692686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 19907315 - 19907385
Alignment:
Q  250 taattcttagcttgattctaattattatggattgtttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    ||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||||    
T  19907315 taattcttagcttgattctaattattatgcattgtttatttctctttgttttgtgttcttagacaatgtgc 19907385  T

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Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 27692154 - 27692239
Alignment:
Q  239 actaacagctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  27692154 actaacatctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 27692239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 19907232 - 19907299
Alignment:
Q  106 taatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||  ||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  19907232 taatgtgagggttaatacgaggaatcagaatctt--gtgactcagtgactaacatctctaattctatctc 19907299  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 27692107 - 27692171
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattct 170  Q
    ||||||||||||||||||  |||||||| ||||||  |||||||| |||||||||| ||||||||||    
T  27692107 gctaatgtgagggttaatacgaggaatctgaatct--tgtgactcggtgactaacatctctaattct 27692171  T

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Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 20714357 - 20714550
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  20714357 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 20714456  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||    
T  20714457 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgagctacattggggatattt 20714550  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 20714026 - 20714103
Alignment:
Q  247 ctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  20714026 ctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 20714103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 20713959 - 20714028
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||| |||||||||| |||||||||||||||    
T  20713959 gctaatgtgagggttaatacgaggaatctgaatctt--gtgactcggtgactaacatctctaattctatctc 20714028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 531
Target Start/End: Original strand, 49227694 - 49227887
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttgattttgggtcaagctgnnnnnnnnnt 437  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||| ||||||| ||||| ||||| |||||||||         |    
T  49227694 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttgttgatttcaatttggttttgtgtcaagctggaaaaaaaat 49227793  T
Q  438 ggaggtaatcttgctgacagtagtattacaaaccggttcaaagacactatccaacagtgtggcttaattgatttgggctatattggggatattt 531  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||| ||| ||||||| | ||||||| |||| |||||||||||||    
T  49227794 ggaggtaatcctattgatagtagtattactaaccagttcaaagacactatccagcagcgtggctttaatgatttgagctacattggggatattt 49227887  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 15857416 - 15857343
Alignment:
Q  338 cttgtgatctttttagtcagatatacagggataattctagaaataggttgtcagtttttggtgatttcgatttg 411  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| || |||||||||||||||| |||||    
T  15857416 cttgtaatctttttagtcagctgtacagcgataattctagaaataggtggttagtttttggtgatttcaatttg 15857343  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 49227363 - 49227440
Alignment:
Q  247 ctctaattcttagcttgattctaattattatggattg----tttactagtctttgttttgtgttcttagacaatgtgc 320  Q
    |||||||||||||||||||||||||||||||| ||||    |||| |  |||||||||||||||||||||||||||||    
T  49227363 ctctaattcttagcttgattctaattattatgcattgtttatttatttctctttgttttgtgttcttagacaatgtgc 49227440  T

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Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 49227296 - 49227365
Alignment:
Q  104 gctaatgtgagggttaatttgaggaatcagaatcttatgtgactcagtgactaacagctctaattctatctc 175  Q
    ||||||||||||||||||  |||||||| ||||||  |||||||| |||||||||| ||||||||| |||||    
T  49227296 gctaatgtgagggttaatacgaggaatctgaatct--tgtgactcggtgactaacatctctaattccatctc 49227365  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 42
Target Start/End: Original strand, 15924 - 15954
Alignment:
Q  12 atgaaaacaacaaataagttagaggaccaaa 42  Q
    |||||||||||||||||||||||||||||||    
T  15924 atgaaaacaacaaataagttagaggaccaaa 15954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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