View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21169_low_24 (Length: 228)
Name: NF21169_low_24
Description: NF21169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21169_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 43110027 - 43109813
Alignment:
| Q |
7 |
agctcttaaggaatcgaaattagttaccatgtcatacgtgatacataaatttataatgcaattaatcatttcacactgctctatttggactctttatttt |
106 |
Q |
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| T |
43110027 |
agctcttaaggaatcgaaattagttaccatgtcatacgtgatacataaatttataatgcaattaatcatttcacactgctctatttggactctttatttt |
43109928 |
T |
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| Q |
107 |
tgggttacaaagatattaacacagttttcgcaggtgcatgacaatgaccaacgagttccctcattcaaacaagagtttttccacaatattcaagagctta |
206 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43109927 |
tgggttacaaagatattaacacagttttcgccggtgcatgacaatgactaacgagttccctcattcaaacaagagtttttccacaatattcaagagctta |
43109828 |
T |
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| Q |
207 |
attccttaagaaaaa |
221 |
Q |
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||||||||| ||||| |
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| T |
43109827 |
attccttaaaaaaaa |
43109813 |
T |
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