View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21169_low_6 (Length: 441)
Name: NF21169_low_6
Description: NF21169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21169_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 47389257 - 47389675
Alignment:
| Q |
1 |
attgtggttttagatcatctaggcagtcattttctgctgattcctttatcagactgttctacttctacatggtttagttctttgcaacctgggatgtaat |
100 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47389257 |
attgtggttttcgatcatctaggcagtcattttctgctgattcctttatcagactgttctacttctacatggtttagttctttgcaacctgggatgtaat |
47389356 |
T |
|
| Q |
101 |
tttcatttgttgatatctggctgaagtctgatgtatatcatttctaagagcatctgttacgcagcaagagaataacagatgatagcaatccaaattcagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47389357 |
tttcatttgttgatatctggctgaagtcagatgtatatcatttctaagagcatctgttacgcagcaagagaataacagatgatagcaatccaaattcagt |
47389456 |
T |
|
| Q |
201 |
gtattaatctcctacattgcaacccccttcttctttcttacctgcacagttgttatttaaggtgccctgtaatttaacgagatctgccaacaattttcat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
47389457 |
gtattaatctcctacattgcaacccccttcttctttcttacctgcacagttgttatttaaggtgccctgtaa-ttaacgagatctgccaacaattttcat |
47389555 |
T |
|
| Q |
301 |
agtctgccacattttcacactaggttagaaaatgtttttccctattggcattagctccaaattcaaattgctagtactgcagtttgctgcatcttcattt |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47389556 |
agtctgccacattttcacactaggttagaaaatgtttttccctatcggcattagctccaaattcaaattgctagtactgcagtttgctgcatcttcattt |
47389655 |
T |
|
| Q |
401 |
gtaactgtctgccaagaatg |
420 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
47389656 |
gtaactgtctgccaagaatg |
47389675 |
T |
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