View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21174_low_11 (Length: 259)

Name: NF21174_low_11
Description: NF21174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21174_low_11
NF21174_low_11
[»] chr6 (76 HSPs)
chr6 (1-113)||(25096552-25096664)
chr6 (170-253)||(12696331-12696414)
chr6 (192-253)||(9025485-9025546)
chr6 (203-259)||(7265595-7265651)
chr6 (170-250)||(9024145-9024225)
chr6 (203-259)||(20518346-20518402)
chr6 (197-252)||(29049893-29049946)
chr6 (205-252)||(7569172-7569219)
chr6 (209-259)||(19040353-19040403)
chr6 (210-259)||(1532241-1532290)
chr6 (172-253)||(3398626-3398706)
chr6 (192-253)||(7086802-7086863)
chr6 (201-250)||(13364705-13364754)
chr6 (196-253)||(20576628-20576685)
chr6 (203-259)||(7151413-7151469)
chr6 (211-259)||(13360382-13360430)
chr6 (203-259)||(14721242-14721298)
chr6 (196-252)||(15443703-15443759)
chr6 (203-259)||(32511668-32511724)
chr6 (195-258)||(7248360-7248423)
chr6 (192-259)||(9027179-9027246)
chr6 (198-253)||(9195751-9195806)
chr6 (209-252)||(34446573-34446616)
chr6 (185-259)||(10770658-10770732)
chr6 (209-259)||(10842533-10842583)
chr6 (209-259)||(13851737-13851787)
chr6 (175-253)||(24138433-24138511)
chr6 (203-253)||(26178683-26178733)
chr6 (195-253)||(26562696-26562754)
chr6 (209-259)||(30866152-30866202)
chr6 (195-253)||(34073341-34073399)
chr6 (203-252)||(9617442-9617491)
chr6 (202-259)||(9658880-9658937)
chr6 (170-259)||(17327624-17327713)
chr6 (203-252)||(33340947-33340996)
chr6 (203-252)||(35125102-35125151)
chr6 (203-259)||(7377980-7378036)
chr6 (203-251)||(9629392-9629440)
chr6 (203-259)||(19044465-19044521)
chr6 (224-259)||(322520-322555)
chr6 (218-253)||(7977847-7977882)
chr6 (196-259)||(10888969-10889032)
chr6 (209-248)||(11591878-11591917)
chr6 (209-252)||(12235527-12235570)
chr6 (198-252)||(28862129-28862184)
chr6 (209-252)||(34895042-34895085)
chr6 (203-253)||(7996380-7996430)
chr6 (203-253)||(8022371-8022421)
chr6 (192-253)||(8805565-8805624)
chr6 (195-253)||(8931596-8931654)
chr6 (195-253)||(9522898-9522956)
chr6 (195-253)||(16766704-16766762)
chr6 (214-252)||(19602194-19602232)
chr6 (203-253)||(21924937-21924987)
chr6 (218-252)||(25038088-25038122)
chr6 (218-252)||(31579242-31579276)
chr6 (203-257)||(33419176-33419230)
chr6 (213-259)||(33817950-33817996)
chr6 (207-252)||(5462694-5462739)
chr6 (203-252)||(5732512-5732561)
chr6 (207-252)||(6349743-6349788)
chr6 (174-246)||(7942269-7942342)
chr6 (218-259)||(11800889-11800929)
chr6 (196-253)||(17435206-17435263)
chr6 (193-250)||(19312746-19312803)
chr6 (218-259)||(25096424-25096465)
chr6 (218-259)||(34595135-34595176)
chr6 (203-247)||(4420181-4420225)
chr6 (196-248)||(8590807-8590859)
chr6 (203-259)||(8776975-8777031)
chr6 (209-249)||(10157995-10158035)
chr6 (209-253)||(12627585-12627629)
chr6 (203-259)||(20371112-20371168)
chr6 (200-252)||(29711270-29711322)
chr6 (218-254)||(31384926-31384962)
chr6 (203-259)||(32298609-32298665)
[»] chr1 (67 HSPs)
chr1 (170-253)||(1486678-1486761)
chr1 (192-259)||(20157341-20157408)
chr1 (197-259)||(6427351-6427413)
chr1 (198-259)||(10572586-10572647)
chr1 (195-259)||(25361887-25361951)
chr1 (201-252)||(1864880-1864931)
chr1 (195-250)||(44482240-44482295)
chr1 (209-255)||(7918219-7918265)
chr1 (197-259)||(9828045-9828107)
chr1 (209-259)||(10233254-10233304)
chr1 (209-259)||(17831539-17831589)
chr1 (195-253)||(21038090-21038148)
chr1 (197-259)||(36905998-36906060)
chr1 (195-256)||(12713321-12713382)
chr1 (195-256)||(12717412-12717473)
chr1 (203-252)||(28674808-28674857)
chr1 (218-259)||(34298437-34298478)
chr1 (192-253)||(34712374-34712435)
chr1 (211-259)||(14332652-14332700)
chr1 (195-259)||(17754312-17754376)
chr1 (203-259)||(36878462-36878518)
chr1 (181-259)||(38503321-38503403)
chr1 (195-259)||(40285648-40285712)
chr1 (204-252)||(42325568-42325616)
chr1 (225-259)||(609482-609516)
chr1 (203-253)||(13436465-13436515)
chr1 (209-259)||(25098563-25098613)
chr1 (209-259)||(26238121-26238170)
chr1 (203-253)||(27471568-27471618)
chr1 (203-253)||(38075972-38076022)
chr1 (211-253)||(40181878-40181920)
chr1 (194-252)||(44296488-44296545)
chr1 (203-248)||(23636051-23636096)
chr1 (198-259)||(34371715-34371775)
chr1 (218-259)||(41877487-41877528)
chr1 (207-252)||(42004953-42004998)
chr1 (196-252)||(6612166-6612222)
chr1 (203-259)||(9709821-9709877)
chr1 (210-250)||(19324572-19324612)
chr1 (170-253)||(19562589-19562673)
chr1 (209-253)||(30847728-30847772)
chr1 (201-252)||(373055-373106)
chr1 (220-259)||(2896140-2896179)
chr1 (196-259)||(5376495-5376558)
chr1 (218-253)||(12443477-12443512)
chr1 (218-253)||(18190125-18190160)
chr1 (202-253)||(23738685-23738736)
chr1 (218-253)||(31015050-31015085)
chr1 (218-253)||(37055873-37055908)
chr1 (209-259)||(398773-398823)
chr1 (209-259)||(2445871-2445921)
chr1 (195-253)||(8010281-8010339)
chr1 (203-253)||(16927187-16927237)
chr1 (170-252)||(19637776-19637853)
chr1 (197-259)||(24577182-24577244)
chr1 (196-253)||(113306-113363)
chr1 (222-259)||(2851022-2851059)
chr1 (215-252)||(3921675-3921712)
chr1 (195-256)||(12707867-12707928)
chr1 (203-252)||(41017406-41017455)
chr1 (203-259)||(5898268-5898324)
chr1 (209-249)||(12611977-12612017)
chr1 (215-259)||(16812544-16812588)
chr1 (201-253)||(21378585-21378637)
chr1 (225-253)||(22947746-22947774)
chr1 (203-259)||(43492496-43492552)
chr1 (209-253)||(49872844-49872888)
[»] chr3 (62 HSPs)
chr3 (170-259)||(8039798-8039893)
chr3 (170-257)||(29508447-29508535)
chr3 (195-252)||(16192744-16192801)
chr3 (203-252)||(20691327-20691376)
chr3 (192-253)||(25948878-25948939)
chr3 (173-258)||(5441005-5441088)
chr3 (196-253)||(11313795-11313852)
chr3 (198-259)||(17005616-17005677)
chr3 (203-259)||(7928451-7928507)
chr3 (195-259)||(9800041-9800105)
chr3 (211-259)||(12704008-12704056)
chr3 (173-253)||(45451560-45451635)
chr3 (212-259)||(11493372-11493419)
chr3 (209-252)||(52369783-52369826)
chr3 (170-240)||(40993309-40993374)
chr3 (218-259)||(4990984-4991025)
chr3 (170-259)||(10954953-10955037)
chr3 (203-252)||(40150573-40150622)
chr3 (203-259)||(8383258-8383314)
chr3 (216-252)||(21149075-21149111)
chr3 (209-253)||(49505162-49505206)
chr3 (209-252)||(1830351-1830394)
chr3 (209-252)||(3730173-3730216)
chr3 (203-250)||(8789552-8789599)
chr3 (200-259)||(10690261-10690320)
chr3 (197-252)||(11093578-11093633)
chr3 (218-253)||(11251985-11252020)
chr3 (198-249)||(15314873-15314924)
chr3 (200-259)||(21478684-21478743)
chr3 (170-253)||(27505253-27505336)
chr3 (209-252)||(32804548-32804591)
chr3 (210-244)||(4704301-4704335)
chr3 (195-253)||(4987285-4987343)
chr3 (227-257)||(11143240-11143270)
chr3 (218-252)||(21211296-21211330)
chr3 (214-252)||(25074797-25074835)
chr3 (213-259)||(29112292-29112338)
chr3 (209-259)||(34307788-34307838)
chr3 (203-259)||(2620057-2620111)
chr3 (195-252)||(2731820-2731877)
chr3 (218-259)||(3618882-3618923)
chr3 (203-252)||(4201404-4201453)
chr3 (203-248)||(6780421-6780466)
chr3 (197-250)||(8039216-8039269)
chr3 (212-253)||(9624648-9624689)
chr3 (218-255)||(12083908-12083945)
chr3 (203-252)||(13799512-13799561)
chr3 (210-259)||(14618782-14618831)
chr3 (218-259)||(14840308-14840349)
chr3 (219-252)||(16789668-16789701)
chr3 (218-259)||(17568700-17568741)
chr3 (170-251)||(20503474-20503550)
chr3 (195-252)||(23184066-23184123)
chr3 (226-259)||(24633767-24633800)
chr3 (203-252)||(25093510-25093559)
chr3 (192-252)||(27513653-27513714)
chr3 (170-253)||(28918008-28918088)
chr3 (218-259)||(34910318-34910359)
chr3 (203-259)||(18426950-18427006)
chr3 (201-249)||(23271994-23272042)
chr3 (198-242)||(29386508-29386552)
chr3 (193-253)||(49651778-49651838)
[»] chr5 (55 HSPs)
chr5 (196-259)||(15410443-15410506)
chr5 (192-252)||(38749554-38749614)
chr5 (181-253)||(43001807-43001879)
chr5 (190-253)||(6471878-6471941)
chr5 (170-253)||(39205887-39205970)
chr5 (170-259)||(30502362-30502446)
chr5 (170-259)||(30542705-30542789)
chr5 (198-259)||(36838544-36838605)
chr5 (197-259)||(3966504-3966566)
chr5 (202-252)||(19737483-19737533)
chr5 (203-252)||(2548395-2548444)
chr5 (218-259)||(27932236-27932277)
chr5 (203-252)||(28296336-28296385)
chr5 (197-253)||(17593718-17593774)
chr5 (176-252)||(23015964-23016040)
chr5 (208-259)||(19293430-19293481)
chr5 (170-253)||(31084330-31084413)
chr5 (209-252)||(31264446-31264489)
chr5 (192-259)||(38806839-38806906)
chr5 (209-259)||(12264837-12264887)
chr5 (201-259)||(23220984-23221042)
chr5 (215-252)||(2419865-2419902)
chr5 (211-252)||(2577190-2577231)
chr5 (203-252)||(28588676-28588725)
chr5 (212-257)||(35017040-35017085)
chr5 (192-249)||(43208265-43208322)
chr5 (170-250)||(14873527-14873607)
chr5 (170-250)||(18421815-18421890)
chr5 (195-259)||(18592074-18592138)
chr5 (215-255)||(21194219-21194259)
chr5 (195-259)||(22423806-22423870)
chr5 (195-259)||(32766937-32767001)
chr5 (196-252)||(40211964-40212020)
chr5 (209-253)||(41091265-41091309)
chr5 (218-249)||(6326314-6326345)
chr5 (209-252)||(18607105-18607148)
chr5 (170-253)||(23012382-23012460)
chr5 (210-249)||(24273039-24273078)
chr5 (210-249)||(24389136-24389175)
chr5 (209-252)||(32630743-32630786)
chr5 (203-253)||(16203797-16203847)
chr5 (209-259)||(19168829-19168879)
chr5 (171-249)||(21194098-21194171)
chr5 (209-259)||(27144464-27144514)
chr5 (210-252)||(41600906-41600948)
chr5 (215-252)||(4344750-4344787)
chr5 (215-252)||(11596469-11596506)
chr5 (226-259)||(19746717-19746750)
chr5 (209-246)||(26205768-26205805)
chr5 (209-258)||(34879352-34879401)
chr5 (195-259)||(6035484-6035547)
chr5 (219-259)||(9449470-9449510)
chr5 (203-259)||(11685940-11685996)
chr5 (218-250)||(19438353-19438385)
chr5 (192-248)||(41558645-41558701)
[»] chr8 (48 HSPs)
chr8 (201-259)||(7658464-7658522)
chr8 (198-252)||(11803267-11803321)
chr8 (204-252)||(3508060-3508108)
chr8 (195-259)||(4611535-4611599)
chr8 (170-253)||(12559074-12559158)
chr8 (213-255)||(13203646-13203688)
chr8 (209-259)||(34897086-34897136)
chr8 (203-259)||(4786340-4786396)
chr8 (203-259)||(18646173-18646229)
chr8 (199-259)||(22493495-22493555)
chr8 (211-259)||(37225753-37225801)
chr8 (200-259)||(7442846-7442905)
chr8 (203-254)||(14134705-14134756)
chr8 (196-259)||(14634136-14634199)
chr8 (198-252)||(11927083-11927137)
chr8 (203-253)||(13844598-13844648)
chr8 (214-252)||(14513187-14513225)
chr8 (209-259)||(24362210-24362260)
chr8 (203-252)||(12985400-12985449)
chr8 (204-253)||(31236580-31236629)
chr8 (210-259)||(39954288-39954337)
chr8 (214-259)||(40063952-40063997)
chr8 (209-253)||(3025558-3025602)
chr8 (209-253)||(14731719-14731763)
chr8 (203-259)||(20679397-20679453)
chr8 (212-252)||(29198490-29198530)
chr8 (197-252)||(4122245-4122300)
chr8 (209-252)||(28883886-28883929)
chr8 (198-252)||(11944673-11944727)
chr8 (203-253)||(12606831-12606881)
chr8 (221-259)||(18067954-18067992)
chr8 (218-252)||(24669441-24669475)
chr8 (196-250)||(33389356-33389410)
chr8 (174-252)||(33405362-33405435)
chr8 (198-259)||(15816126-15816187)
chr8 (170-259)||(16641943-16642032)
chr8 (226-259)||(27067323-27067356)
chr8 (195-252)||(28819199-28819256)
chr8 (203-252)||(33382021-33382070)
chr8 (211-252)||(34201056-34201097)
chr8 (206-259)||(36934671-36934724)
chr8 (218-251)||(40332200-40332233)
chr8 (218-254)||(4948658-4948694)
chr8 (219-259)||(14227223-14227263)
chr8 (197-253)||(25172694-25172750)
chr8 (209-249)||(26418350-26418390)
chr8 (219-259)||(29447128-29447168)
chr8 (218-258)||(37283827-37283867)
[»] chr4 (57 HSPs)
chr4 (170-259)||(36635325-36635415)
chr4 (192-252)||(18513232-18513292)
chr4 (206-251)||(46180941-46180986)
chr4 (193-253)||(15659752-15659812)
chr4 (195-252)||(7012074-7012131)
chr4 (207-252)||(20743284-20743329)
chr4 (203-252)||(40783965-40784014)
chr4 (203-259)||(5775360-5775416)
chr4 (173-253)||(21945510-21945585)
chr4 (174-253)||(3947739-3947818)
chr4 (203-250)||(18576039-18576086)
chr4 (209-252)||(24343515-24343558)
chr4 (170-253)||(29205451-29205529)
chr4 (209-252)||(31243556-31243599)
chr4 (213-252)||(43299983-43300022)
chr4 (213-252)||(43300624-43300663)
chr4 (203-253)||(15029772-15029822)
chr4 (210-252)||(22440609-22440651)
chr4 (203-253)||(33950143-33950193)
chr4 (209-259)||(40613451-40613501)
chr4 (209-259)||(55941011-55941061)
chr4 (211-252)||(903930-903971)
chr4 (218-259)||(8423735-8423776)
chr4 (203-259)||(7214524-7214580)
chr4 (215-259)||(17446072-17446116)
chr4 (203-251)||(30103359-30103406)
chr4 (213-253)||(37698719-37698759)
chr4 (203-259)||(54580025-54580081)
chr4 (209-252)||(5654599-5654642)
chr4 (209-252)||(14465302-14465345)
chr4 (204-259)||(16189710-16189765)
chr4 (195-258)||(30982872-30982935)
chr4 (170-246)||(37496718-37496800)
chr4 (203-253)||(4672087-4672137)
chr4 (209-259)||(6933276-6933326)
chr4 (214-252)||(10546156-10546194)
chr4 (209-251)||(11110212-11110254)
chr4 (203-252)||(15835640-15835690)
chr4 (209-259)||(22596988-22597038)
chr4 (218-252)||(32910559-32910593)
chr4 (203-257)||(36386213-36386267)
chr4 (195-253)||(51701265-51701323)
chr4 (209-259)||(56488518-56488568)
chr4 (206-259)||(30522920-30522973)
chr4 (218-259)||(38148742-38148783)
chr4 (174-259)||(40179614-40179694)
chr4 (195-244)||(46160912-46160961)
chr4 (225-253)||(847958-847986)
chr4 (192-244)||(7970535-7970587)
chr4 (192-252)||(9906782-9906842)
chr4 (211-251)||(9996849-9996889)
chr4 (197-253)||(11596348-11596404)
chr4 (195-259)||(19482669-19482733)
chr4 (227-259)||(21658840-21658872)
chr4 (219-259)||(24613719-24613759)
chr4 (195-259)||(40742592-40742656)
chr4 (203-251)||(49659525-49659573)
[»] chr7 (68 HSPs)
chr7 (170-253)||(5409805-5409888)
chr7 (209-259)||(4909152-4909202)
chr7 (195-249)||(17307904-17307958)
chr7 (197-259)||(27945042-27945104)
chr7 (198-259)||(23128658-23128719)
chr7 (192-252)||(5233637-5233697)
chr7 (203-259)||(5835248-5835304)
chr7 (195-259)||(8160417-8160481)
chr7 (195-259)||(15902823-15902887)
chr7 (200-252)||(36314626-36314678)
chr7 (192-259)||(7758323-7758390)
chr7 (174-253)||(21880159-21880233)
chr7 (174-252)||(1433462-1433540)
chr7 (209-259)||(22868043-22868093)
chr7 (198-252)||(44172887-44172941)
chr7 (196-253)||(7328686-7328743)
chr7 (172-253)||(13770698-13770779)
chr7 (203-259)||(29787373-29787427)
chr7 (171-259)||(32093990-32094079)
chr7 (173-259)||(32308121-32308213)
chr7 (170-250)||(9778510-9778590)
chr7 (192-252)||(16341504-16341564)
chr7 (203-259)||(20549792-20549848)
chr7 (192-259)||(5548677-5548744)
chr7 (174-252)||(21138969-21139044)
chr7 (176-259)||(22484026-22484104)
chr7 (196-247)||(22602705-22602756)
chr7 (209-252)||(27732247-27732290)
chr7 (218-253)||(30813819-30813854)
chr7 (209-252)||(38134414-38134457)
chr7 (170-253)||(43027438-43027521)
chr7 (195-253)||(3142072-3142130)
chr7 (209-259)||(6630920-6630970)
chr7 (209-259)||(18013082-18013132)
chr7 (207-249)||(23930230-23930272)
chr7 (194-252)||(31808502-31808560)
chr7 (198-252)||(35297669-35297723)
chr7 (203-252)||(21247738-21247787)
chr7 (218-259)||(28155571-28155612)
chr7 (170-259)||(32287437-32287521)
chr7 (214-250)||(7133291-7133327)
chr7 (203-259)||(7546161-7546217)
chr7 (170-259)||(10042938-10043029)
chr7 (209-253)||(17851438-17851482)
chr7 (203-259)||(19206051-19206107)
chr7 (192-252)||(33384573-33384633)
chr7 (218-253)||(2424621-2424656)
chr7 (203-250)||(9482944-9482991)
chr7 (209-252)||(12278843-12278886)
chr7 (201-252)||(44020983-44021034)
chr7 (203-253)||(3721100-3721150)
chr7 (203-253)||(19992008-19992058)
chr7 (221-251)||(24289829-24289859)
chr7 (195-253)||(24339649-24339707)
chr7 (203-253)||(25481909-25481959)
chr7 (201-259)||(46644687-46644745)
chr7 (203-252)||(2525846-2525895)
chr7 (218-259)||(23191897-23191938)
chr7 (195-252)||(26329376-26329433)
chr7 (218-251)||(30731046-30731079)
chr7 (203-252)||(38143231-38143280)
chr7 (179-259)||(8046008-8046085)
chr7 (203-259)||(8090027-8090083)
chr7 (192-252)||(11890910-11890970)
chr7 (209-249)||(18233606-18233646)
chr7 (203-259)||(26733305-26733361)
chr7 (203-259)||(37742524-37742580)
chr7 (202-246)||(38629965-38630009)
[»] scaffold0036 (1 HSPs)
scaffold0036 (198-256)||(9744-9802)
[»] chr2 (54 HSPs)
chr2 (203-253)||(18889593-18889643)
chr2 (209-259)||(21616763-21616813)
chr2 (195-259)||(2665884-2665946)
chr2 (170-255)||(5367197-5367277)
chr2 (198-259)||(44860321-44860382)
chr2 (176-252)||(30527570-30527646)
chr2 (203-259)||(42832278-42832334)
chr2 (209-252)||(10535767-10535810)
chr2 (195-254)||(12668417-12668476)
chr2 (209-252)||(18570980-18571023)
chr2 (204-259)||(23718027-23718082)
chr2 (204-259)||(24105699-24105754)
chr2 (209-259)||(4229416-4229466)
chr2 (218-252)||(23921261-23921295)
chr2 (209-259)||(29970557-29970607)
chr2 (209-259)||(37411252-37411302)
chr2 (203-252)||(2415325-2415374)
chr2 (207-252)||(12748692-12748737)
chr2 (197-254)||(18622612-18622669)
chr2 (170-259)||(18840987-18841071)
chr2 (202-259)||(28121550-28121607)
chr2 (203-252)||(34006993-34007042)
chr2 (211-252)||(36281693-36281734)
chr2 (218-259)||(39323265-39323306)
chr2 (203-252)||(40361756-40361805)
chr2 (170-239)||(41843462-41843531)
chr2 (210-246)||(15909641-15909677)
chr2 (203-259)||(18276522-18276578)
chr2 (197-253)||(18420430-18420486)
chr2 (208-252)||(19613620-19613664)
chr2 (218-258)||(25846743-25846783)
chr2 (211-259)||(28677910-28677958)
chr2 (220-259)||(2331795-2331834)
chr2 (211-250)||(17520080-17520119)
chr2 (218-253)||(21374716-21374751)
chr2 (218-253)||(21782835-21782870)
chr2 (209-252)||(24011044-24011087)
chr2 (209-252)||(25544489-25544532)
chr2 (209-252)||(35449521-35449564)
chr2 (201-252)||(39279683-39279734)
chr2 (192-251)||(44776608-44776667)
chr2 (209-259)||(31808078-31808128)
chr2 (203-253)||(34691807-34691857)
chr2 (203-253)||(34714219-34714269)
chr2 (202-252)||(44605140-44605190)
chr2 (201-246)||(8300219-8300264)
chr2 (209-250)||(11308012-11308053)
chr2 (203-252)||(22085012-22085061)
chr2 (203-252)||(31026703-31026752)
chr2 (198-259)||(36756341-36756402)
chr2 (203-248)||(45000848-45000893)
chr2 (209-253)||(896218-896262)
chr2 (203-259)||(20242729-20242785)
chr2 (203-247)||(38355889-38355933)
[»] scaffold0020 (2 HSPs)
scaffold0020 (192-253)||(135303-135364)
scaffold0020 (197-251)||(137789-137843)
[»] scaffold0004 (1 HSPs)
scaffold0004 (218-259)||(92808-92849)
[»] scaffold1528 (1 HSPs)
scaffold1528 (195-259)||(1036-1100)
[»] scaffold0123 (1 HSPs)
scaffold0123 (195-259)||(44519-44583)
[»] scaffold0044 (1 HSPs)
scaffold0044 (170-251)||(53189-53276)
[»] scaffold0022 (2 HSPs)
scaffold0022 (197-252)||(99901-99956)
scaffold0022 (213-259)||(90844-90890)
[»] scaffold0024 (1 HSPs)
scaffold0024 (192-246)||(18099-18153)
[»] scaffold0110 (1 HSPs)
scaffold0110 (191-252)||(28858-28919)
[»] scaffold0049 (2 HSPs)
scaffold0049 (222-259)||(63774-63811)
scaffold0049 (195-250)||(56932-56987)
[»] scaffold0011 (1 HSPs)
scaffold0011 (203-252)||(240023-240072)
[»] scaffold0171 (1 HSPs)
scaffold0171 (184-240)||(23440-23496)
[»] scaffold0598 (1 HSPs)
scaffold0598 (214-252)||(8066-8104)
[»] scaffold0376 (1 HSPs)
scaffold0376 (203-253)||(6319-6369)
[»] scaffold0320 (1 HSPs)
scaffold0320 (202-252)||(17037-17087)
[»] scaffold0085 (1 HSPs)
scaffold0085 (225-259)||(26394-26428)
[»] scaffold0050 (1 HSPs)
scaffold0050 (174-252)||(70286-70359)
[»] scaffold0018 (1 HSPs)
scaffold0018 (218-252)||(192266-192300)
[»] scaffold0008 (1 HSPs)
scaffold0008 (195-253)||(263366-263424)
[»] scaffold0361 (1 HSPs)
scaffold0361 (218-259)||(14531-14572)
[»] scaffold0306 (1 HSPs)
scaffold0306 (222-259)||(13401-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (222-259)||(21889-21926)


Alignment Details
Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25096664 - 25096552
Alignment:
Q  1 tcatcaaatccagcattctcaagcatctgtgaatgatttagaatattagtatcatatcatgtaatagaaattaattcaaaaatgtttcaaatcaaaagtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  25096664 tcatcaaatccagcattctcaagcatctgtgaatcatttacaatattagtagcatatcttgtaattgaaataaattcaaaaatgtttcaaatcaaaagtt 25096565  T
Q  101 atattgaataact 113  Q
    |||||||||||||    
T  25096564 atattgaataact 25096552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 12696414 - 12696331
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||| |||| ||||| |||||||||| ||||  |||| | | ||||||||||||||||||||||| ||||||||||||    
T  12696414 tcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattag 12696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 9025485 - 9025546
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  9025485 tgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 7265595 - 7265651
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  7265595 acaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 9024145 - 9024225
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||| ||| ||||  | |||||||||| ||||  ||||||||||||||| |||||||||| |||||||||||||||    
T  9024145 tcccggtgttggatatgtcccgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 20518402 - 20518346
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  20518402 acaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgt 20518346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 29049946 - 29049893
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  29049946 gacacaacaccaacacat--gattacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 7569172 - 7569219
Alignment:
Q  205 accaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 19040403 - 19040353
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  19040403 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 19040353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 3398706 - 3398626
Alignment:
Q  172 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||| ||||| |||| ||||| | || ||| ||||||||||||||| | ||||| ||||||||||||    
T  3398706 ccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaattattag 3398626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 7086863 - 7086802
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  7086863 tgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 13364705 - 13364754
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  13364705 caacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 20576628 - 20576685
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||| |||||||||    
T  20576628 cgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattag 20576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 7151469 - 7151413
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| |||||||| |||||||| ||||| |||||||||||| |||||    
T  7151469 acaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgt 7151413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 13360382 - 13360430
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 14721298 - 14721242
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||||||| ||||||    
T  14721298 acaccaacacatataattatagtgaattatgtaattttcttaaattattaatggtgt 14721242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 15443759 - 15443703
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||| |||| |||| | |||||||||| |||||||||||||||||    
T  15443759 cgacacaacaccaacatatataattatattgaattatgttattttctcaaattatta 15443703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 32511668 - 32511724
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| ||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  32511668 acaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 7248423 - 7248360
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 258  Q
    ||||||| || ||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||    
T  7248423 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 9027246 - 9027179
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| ||||| |||||||| ||||||| ||||||||| ||| |||||||||||||| |||||    
T  9027246 tgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgt 9027179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 9195751 - 9195806
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 34446616 - 34446573
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  34446616 acacctatgattacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 10770658 - 10770732
Alignment:
Q  185 tgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||| ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||| ||||    
T  10770658 tgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 10770732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 10842583 - 10842533
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgt 10842533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 13851787 - 13851737
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 24138511 - 24138433
Alignment:
Q  175 gtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||| ||||||||||| |||||||||| | |||||| | |||||| |||||| | ||||| ||||||||||||    
T  24138511 gtgtcagacacgtgtcatgtccaacacaacaccgatacatataaatacacttaattatatgattttttcaaattattag 24138433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 26562754 - 26562696
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||| | |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  26562754 ccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttag 26562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 30866152 - 30866202
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||| |||||||||| |||||||||||||||||| |||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 34073341 - 34073399
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||||| || ||||| ||||||||||||||||  ||||||||||||||||||    
T  34073341 ccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 9617491 - 9617442
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  9617491 acaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 9658937 - 9658880
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||| |||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  9658937 aacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgt 9658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 17327624 - 17327713
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||| ||||| |||||||||| ||||  ||||||||  ||||||| |||||||| ||||||||||| | ||||| ||||    
T  17327624 tccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgt 17327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 33340947 - 33340996
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  33340947 acaccaacacatatgattccattgagttatgtgattttctcaaattatta 33340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 35125151 - 35125102
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  35125151 acaccaacacatatgattccattgagttatgtgattttctcaaattatta 35125102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 7378036 - 7377980
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||| |||| |||||    
T  7378036 acaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgt 7377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 9629440 - 9629392
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||||||    
T  9629440 acaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 19044521 - 19044465
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| || |||||||||||||| || |||||||||||||||| ||||    
T  19044521 acaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgt 19044465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 322555 - 322520
Alignment:
Q  224 ctgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||| ||||||||||||||||    
T  322555 ctgaattatgtaattttcttaaattattagtggtgt 322520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 7977847 - 7977882
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||||||| ||||||||||||    
T  7977847 attacactgaattatgtaattttttcaaattattag 7977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 10888969 - 10889032
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||| ||||||||| || ||||| |||||||| ||||| |||||||||||| |||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 11591878 - 11591917
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaatt 248  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  11591878 acacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 12235527 - 12235570
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||    
T  12235527 acacctatgattacactgaattatgtcattttctctaattatta 12235570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 28862184 - 28862129
Alignment:
Q  198 acacaacaccaacacatatgattacactgaatt-atgtaattttctcaaattatta 252  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||| |||||||||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattatta 28862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 34895042 - 34895085
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||| | |||||||||||||||||||    
T  34895042 acacctatgattacactgaattgtataattttctcaaattatta 34895085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 7996380 - 7996430
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| || ||||| ||||||||||||||| | ||||||||||||||||||    
T  7996380 acaccgacgcatataattacactgaattatatgattttctcaaattattag 7996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 8022421 - 8022371
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| || ||||| ||||||||||||||| | ||||||||||||||||||    
T  8022421 acaccgacgcatataattacactgaattatatgattttctcaaattattag 8022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 8805565 - 8805624
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| ||||| |||||||  |||||||| |||||||| ||||||||||||||||||    
T  8805565 tgtctgacactacaccgacacata--attacactaaattatgtgattttctcaaattattag 8805624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 8931596 - 8931654
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||| | |||||||| |||| |||||||||||| ||||||||||||| ||||    
T  8931596 ccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttag 8931654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 9522956 - 9522898
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||| |||| | | ||||||||||||||||| ||||| | ||||||||||    
T  9522956 ccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 16766762 - 16766704
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  16766762 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 16766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 19602194 - 19602232
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  19602194 tatgattacactgaattatatcattttctcaaattatta 19602232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 21924937 - 21924987
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| ||||||||||||||| | || |||||||||||||||    
T  21924937 acaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 25038088 - 25038122
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  25038088 attacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 31579242 - 31579276
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||| |||||||||||||||||    
T  31579242 attacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 33419230 - 33419176
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 257  Q
    |||||||||||||| |||||| |||||||| | | ||| ||||||||||||||||    
T  33419230 acaccaacacatataattacattgaattatatcaatttttcaaattattagtggt 33419176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 33817996 - 33817950
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||||||||||| ||||||||| ||||||||| |||||    
T  33817996 atataattacactgaattatgaaattttctccaattattagcggtgt 33817950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 5462739 - 5462694
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||| |||||| |||||||||| |||||||||||||||||    
T  5462739 caacatatataattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 5732512 - 5732561
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||| |||||||| || ||||| |||||||||||||||||    
T  5732512 acaccgacacatataattacactaaaatatgtgattttctcaaattatta 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 6349743 - 6349788
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| | |||||| |||||||||||||||| |||||||||||    
T  6349743 caacacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 7942342 - 7942269
Alignment:
Q  174 ggtgtcggacatgtgtca-tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaa 246  Q
    |||||| |||| |||||| ||||||||||| |||  |||||| |||||||| |||||||||| ||| |||||||    
T  7942342 ggtgtccgacacgtgtcagtgtccgacacagcactgacacatgtgattacattgaattatgtcattgtctcaaa 7942269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 11800929 - 11800889
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  11800929 attacact-aattatgtaattttctcaaattattaatggtgt 11800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 17435263 - 17435206
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||| ||||| | | ||||||||||||||||||||||| | ||||||||||    
T  17435263 cgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 19312803 - 19312746
Alignment:
Q  193 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||| ||||||||||| ||||||||  |||||| ||||||||| | |||||||    
T  19312803 gtccgacacgacaccaacacacatgattactttgaattttgtaattttttaaaattat 19312746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 25096465 - 25096424
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||  ||||||| ||||||||||||||||||||||||    
T  25096465 attacactagattatgtgattttctcaaattattagtggtgt 25096424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 34595176 - 34595135
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  34595176 attacactgaattatgtgattttttcaaattattagttgtgt 34595135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 4420181 - 4420225
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaat 247  Q
    |||||||||| |||| |||||||||||||| | ||||||||||||    
T  4420181 acaccaacacctatggttacactgaattatatcattttctcaaat 4420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 8590807 - 8590859
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatt 248  Q
    |||||| ||| | |||||||||||||||| ||| || ||||||||||||||||    
T  8590807 cgacacgacaacgacacatatgattacaccgaaatacgtaattttctcaaatt 8590859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 8776975 - 8777031
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| | | ||||||||||||| ||| ||||| ||||||||||||| ||||    
T  8776975 acaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgt 8777031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 10158035 - 10157995
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaatta 249  Q
    |||||| |||||||| |||||||||| ||||||||||||||    
T  10158035 acacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 12627585 - 12627629
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| ||||||||||||||||| ||||| ||| ||||||||    
T  12627585 acacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 20371112 - 20371168
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| || ||| ||| |||||| |||||||||||||||||| |||||    
T  20371112 acaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgt 20371168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 29711322 - 29711270
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| |||||| || ||| | |||||||||| |||||||||||||||||    
T  29711322 acaacaccgacacatgtggttataatgaattatgtcattttctcaaattatta 29711270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 31384962 - 31384926
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagt 254  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  31384962 attacactgaattatgtgattttttcaaattattagt 31384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 32298609 - 32298665
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| |||||||| |||||||| ||  ||| |||||||||| |||||    
T  32298609 acaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 1486678 - 1486761
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  1486678 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 20157341 - 20157408
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  20157341 tgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 6427413 - 6427351
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||||||||||| |||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 10572586 - 10572647
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| |||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgt 10572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 25361951 - 25361887
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||  |||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  25361951 ccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgt 25361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 1864880 - 1864931
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  1864880 caacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 44482295 - 44482240
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  44482295 ccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 7918219 - 7918265
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtg 255  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattagtg 7918265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 9828107 - 9828045
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| |||||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgt 9828045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 10233304 - 10233254
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgt 10233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 17831539 - 17831589
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgt 17831589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 21038148 - 21038090
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||||  || ||||||||||||||||||||||||||||||| ||||||||||    
T  21038148 ccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattag 21038090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 36906060 - 36905998
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||| |||||    
T  36906060 gacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 12713321 - 12713382
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 256  Q
    |||||| |||||||| |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  12713321 ccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12713382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 12717412 - 12717473
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 256  Q
    |||||| |||||||| |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  12717412 ccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12717473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 28674857 - 28674808
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  28674857 acaccaacatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 34298478 - 34298437
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  34298478 attacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 34712374 - 34712435
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||| ||||  |||||||| |||||||| |||||||| ||||||||||||||||||    
T  34712374 tgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattag 34712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 14332652 - 14332700
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 17754376 - 17754312
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||  ||||||||  |||||||||||||||||||||| |||||||||||| |||||    
T  17754376 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 17754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 36878518 - 36878462
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||| ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgt 36878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 38503403 - 38503321
Alignment:
Q  181 gacatgtgtcatgtccgac--aca--acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||  |||  ||||| |||||||| ||||||||||| ||| | |||||||||||||||||| |||||    
T  38503403 gacatgtgtcatgtccgaccgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 40285648 - 40285712
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||| | |||||||||| ||||||||||||||  |||||||||||||||||| |||||    
T  40285648 ccgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgt 40285712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 42325616 - 42325568
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 609482 - 609516
Alignment:
Q  225 tgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgt 609516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 13436515 - 13436465
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||| ||||||||||||||||| |||| || ||||||||||    
T  13436515 acaccaacacatataattacactgaattatgtgatttccttaaattattag 13436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 25098563 - 25098613
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| ||||||||||||||| || |||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgt 25098613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 26238121 - 26238170
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  26238121 acacatat-attacactgaattatgttattttctcaaattattagcggtgt 26238170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 27471568 - 27471618
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||| | |||||||||||||||||  |||||||||||||||||    
T  27471568 acaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 38075972 - 38076022
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||||||||||||||||| |||||| |||| |||||||||||||    
T  38075972 acaccgacacatatgattacactgacttatgtgatttactcaaattattag 38076022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 40181920 - 40181878
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 44296488 - 44296545
Alignment:
Q  194 tccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||||| ||||||||||||| ||| |||||||| |||||||||||||||||    
T  44296488 tccgacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattatta 44296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 23636051 - 23636096
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaatt 248  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||    
T  23636051 acaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 34371775 - 34371715
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||||||| ||||||||||||||||| |||||||| ||||||||| |||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 41877487 - 41877528
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41877487 attacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 42004953 - 42004998
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||    
T  42004953 caacacctatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 6612166 - 6612222
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| ||||| |||| | | ||||||||||||||||||||||| |||||||||||    
T  6612166 cgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 9709877 - 9709821
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||  ||||||||| |||||||||||||||||| |||||    
T  9709877 acaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 19562589 - 19562673
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| |||||||||| ||||  | ||||||||  ||||| |||||||| ||||||||||| ||||  ||||||||||||||||||    
T  19562589 tccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatgagattttctcaaattattag 19562673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 30847728 - 30847772
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||    
T  30847728 acacatatgattacattgaattatgtcattttttcaaattattag 30847772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 373106 - 373055
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||    
T  373106 caacaccgacacatatgattaaactaaatcatgtcattttctcaaattatta 373055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 2896140 - 2896179
Alignment:
Q  220 tacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgt 2896179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 5376495 - 5376558
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||| |||| | | ||||||||||||||||| ||||||| |||||||||| |||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgt 5376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 12443477 - 12443512
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12443477 attacactgaattatgtgattttctcaaattattag 12443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 18190125 - 18190160
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||||||| ||||||||||||    
T  18190125 attacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 23738736 - 23738685
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||    
T  23738736 aacaccaacacatttaattgcactgaattatgtgattttttcaaattattag 23738685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 31015085 - 31015050
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31015085 attacactgaattatgtgattttctcaaattattag 31015050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 37055873 - 37055908
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| |||||||||||||||||||||||||||    
T  37055873 attacactaaattatgtaattttctcaaattattag 37055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 398773 - 398823
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgt 398823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 2445921 - 2445871
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| | |||||||||| ||||||||||||||| | ||||||    
T  2445921 acacatatgattaaattgaattatgtcattttctcaaattatcattggtgt 2445871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 8010281 - 8010339
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||| | |||| ||| |||| |||||||||| ||||||| ||||||||||||    
T  8010281 ccgacacaacatcgacacttataattatactgaattatataattttttcaaattattag 8010339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 16927187 - 16927237
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||| |||| ||||||||||||||| | ||||| ||||||||||||    
T  16927187 acaccaacatatataattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 19637853 - 19637776
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||| |||| || ||||||||||     | ||||||||||||||| ||||| |||| ||||||| |||||||||    
T  19637853 tcccggtgtcggatatgtatcgtgtccgacac-----cgacacatatgattacattgaataatgtcattttcttaaattatta 19637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 24577182 - 24577244
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||| ||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 24577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 113363 - 113306
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 2851059 - 2851022
Alignment:
Q  222 cactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt 2851022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 3921712 - 3921675
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  3921712 atgattacattgaattatgtcattttctcaaattatta 3921675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 12707867 - 12707928
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 256  Q
    |||||| |||||||| |||||| ||| |||| |||||| | ||||||| |||||||||||||    
T  12707867 ccgacataacaccaatacatataattgcactaaattatatgattttcttaaattattagtgg 12707928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 41017406 - 41017455
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||| |||||| | |||||||| |||||||||||||||||    
T  41017406 acaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 5898268 - 5898324
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||| |||||    
T  5898268 acaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 12612017 - 12611977
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||||||||||||| |||||||| ||||| ||||||||    
T  12612017 acacatatgattacactcaattatgtgattttttcaaatta 12611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 16812588 - 16812544
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  16812588 atgattccactgaattatgtgattttgtcaaattattattggtgt 16812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 21378637 - 21378585
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| |||| | | ||||||||||||||||||||||| |||| |||||||    
T  21378637 caacaccgacacttgtaattacactgaattatgtaattttttcaatttattag 21378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 22947774 - 22947746
Alignment:
Q  225 tgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||||||||||||||||||    
T  22947774 tgaattatgtaattttctcaaattattag 22947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 43492496 - 43492552
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| || ||||||| |||||| || |||||||||||||| |||||||||    
T  43492496 acaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgt 43492552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 49872888 - 49872844
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  49872888 acacatataattacactgaattatatagttttctcaaatgattag 49872844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 8039798 - 8039893
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacaca------acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||| |||||||||||||       ||||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  8039798 tcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 29508535 - 29508447
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacac-aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 257  Q
    |||||||||||||| |||||| |||||||||| |||| | |||||||| ||||||||||||||| | ||||| ||||||||||||||||    
T  29508535 tcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatgattttttcaaattattagtggt 29508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 16192744 - 16192801
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  16192744 ccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 20691376 - 20691327
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 25948878 - 25948939
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||| |||||||||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  25948878 tgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 5441005 - 5441088
Alignment:
Q  173 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 258  Q
    |||||| ||||||||||| |||| ||||||||||| |||||||  ||| || |||||||||| ||||||||||||| |||| ||||    
T  5441005 cggtgttggacatgtgtcgtgtctgacacaacaccgacacata--attccattgaattatgtgattttctcaaatttttagcggtg 5441088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 11313795 - 11313852
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| |||| ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattattag 11313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 17005616 - 17005677
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| |||| ||| ||||||||||||||| | ||||| ||||||||||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 7928507 - 7928451
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  7928507 acaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 9800105 - 9800041
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||| |||| ||  ||||||| |||||||||||||||||||||||||||| |||||    
T  9800105 ccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgt 9800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 12704056 - 12704008
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgt 12704008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 45451635 - 45451560
Alignment:
Q  173 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||||||| ||||||||||     | |||||||| |||| |||||| ||||| ||||||||||||||||||    
T  45451635 cggtgtcggacatgtgtcgtgtccgacac-----cgacacatattattatactgaagtatgtgattttctcaaattattag 45451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 11493372 - 11493419
Alignment:
Q  212 catatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgt 11493419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 52369826 - 52369783
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  52369826 acacctatgattacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 40993309 - 40993374
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||||||||||||||||| ||||||||||     | |||||||| ||||||||||||||||| |||||    
T  40993309 tcccggtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 4990984 - 4991025
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  4990984 attacactgaattatgtaattttctcaaactattagcggtgt 4991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 10955037 - 10954953
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||||| ||||| ||||||||||     | |||| | ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  10955037 tcccagtgtcggacacgtgtcgtgtccgacac-----cgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgt 10954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 40150573 - 40150622
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||||||    
T  40150573 acaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 8383314 - 8383258
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||| ||| ||||||||||||||| | |||||||||||||||||| |||||    
T  8383314 acaccgacacttataattacactgaattatatgattttctcaaattattagcggtgt 8383258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 21149111 - 21149075
Alignment:
Q  216 tgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21149111 tgattacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 49505162 - 49505206
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||    
T  49505162 acacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 1830394 - 1830351
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||    
T  1830394 acacctatgattacactgaattatgtcattttcttaaattatta 1830351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 3730173 - 3730216
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||    
T  3730173 acacctatgattacactgaattatgtcattatctcaaattatta 3730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 8789552 - 8789599
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  8789552 acaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 10690261 - 10690320
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||| ||| |||| ||||||||||||||||| ||||||||| |||||||| |||||    
T  10690261 acaataccgacaaatataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 11093633 - 11093578
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||||||| |||||||  |||||||||| ||||| |||||||||||    
T  11093633 gacacgacaccaacacatctgattactttgaattatgtcattttttcaaattatta 11093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 11252020 - 11251985
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11252020 attacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    |||| |||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 21478743 - 21478684
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||| ||| |||||| || || | ||||||||| ||||||    
T  21478743 acaacaccaacacatatgattacattgatttatgtcatcttgtgaaattattattggtgt 21478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 27505336 - 27505253
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||| | | |||||||| |||||||| |||||   ||||||||||    
T  27505336 tcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattag 27505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 32804548 - 32804591
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| |||||||| |||||||| |||||||||||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 4704301 - 4704335
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctca 244  Q
    ||||||||||||||||||||||||| |||||||||    
T  4704301 cacatatgattacactgaattatgtcattttctca 4704335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 4987285 - 4987343
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||  ||||||||| | | ||||||||||||||||| ||||| ||||||||||||    
T  4987285 ccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattag 4987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 257
Target Start/End: Complemental strand, 11143270 - 11143240
Alignment:
Q  227 aattatgtaattttctcaaattattagtggt 257  Q
    |||||||||||||||||||||||||||||||    
T  11143270 aattatgtaattttctcaaattattagtggt 11143240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 21211330 - 21211296
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| |||||||||||||||||||||||    
T  21211330 attacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 25074835 - 25074797
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  25074835 tatgattacactcaattatgtcattttctcaaattatta 25074797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 29112292 - 29112338
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgt 29112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 34307788 - 34307838
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 2620057 - 2620111
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||   ||||||| |||||||| |||||||||||| |||||||||||    
T  2620057 acaccaacacatag--ttacacttaattatgtgattttctcaaatgattagtggtgt 2620111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 2731877 - 2731820
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||  |||||||| |||||||| |||||||| ||||||| ||| |||||    
T  2731877 ccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtatta 2731820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 3618923 - 3618882
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||| ||||||||||||||||||| |||||    
T  3618923 attacgctgaattatggaattttctcaaattattagcggtgt 3618882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 4201453 - 4201404
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||| |||||||| |||||||| ||||| |||||||||||    
T  4201453 acaccaacatatataattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 6780421 - 6780466
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaatt 248  Q
    |||||||||||||| ||||||||||| || || |||||||||||||    
T  6780421 acaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 8039269 - 8039216
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||||| |||| |||||||||| ||||| |||  |||||||||||||||    
T  8039269 gacacaacaccgacacctatgattacattgaatcatgccattttctcaaattat 8039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 9624689 - 9624648
Alignment:
Q  212 catatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||| |||||||||| ||||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattag 9624648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 12083945 - 12083908
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtg 255  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  12083945 attacactgaattatgtagttttctcaatttattagtg 12083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 13799561 - 13799512
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||| |||||    
T  13799561 acaccgacacatattattacacttaattatgtcattttctcaaactatta 13799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 14618831 - 14618782
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||||||||||||||||  |||||| |||||||||| |||||    
T  14618831 cacatattattacactgaattatgtggttttcttaaattattaggggtgt 14618782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 14840308 - 14840349
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||    
T  14840308 attacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 16789668 - 16789701
Alignment:
Q  219 ttacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||| |||||||||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattatta 16789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 17568700 - 17568741
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| | |||||||||||||||||||||||||| ||||||    
T  17568700 attacattaaattatgtaattttctcaaattattaatggtgt 17568741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 20503550 - 20503474
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    |||||||||| |||||||||| |||||     |||||| |||| | | ||||||||||||||||| ||||| ||||||||||    
T  20503550 tcccggtgtcagacatgtgtcgtgtcc-----aacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 23184066 - 23184123
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||||||||||| ||||||  ||||||| | ||||| |||||||||||    
T  23184066 ccgacacaataccaacacatataattacatagaattatatgattttgtcaaattatta 23184123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 24633800 - 24633767
Alignment:
Q  226 gaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||| ||||||||||||||||||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgt 24633767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 25093559 - 25093510
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||||| ||||    
T  25093559 acaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 27513653 - 27513714
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgt-aattttctcaaattatta 252  Q
    |||||||||  ||||| ||||||||||||||| ||||| |||| | ||||||||||||||||    
T  27513653 tgtccgacaagacaccgacacatatgattacattgaataatgtcatttttctcaaattatta 27513714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 28918088 - 28918008
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| |||||||||| ||||| |||||   || ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  28918088 tcccagtgtcggacacgtgtcgtgtcc---acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 28918008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 34910359 - 34910318
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  34910359 attacactgaattatgtgattttttcaaattattagttgtgt 34910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 18427006 - 18426950
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||| |||| ||||||| ||||||||| ||||| | ||||||||||||||||    
T  18427006 acaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgt 18426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 23271994 - 23272042
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  23271994 caacaccgacacatatgattacattcaattatgtcagtttctcaaatta 23272042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 29386508 - 29386552
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttct 242  Q
    |||| ||||| ||||||||||||||||||||||||| | ||||||    
T  29386508 acacgacaccgacacatatgattacactgaattatgcagttttct 29386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 49651778 - 49651838
Alignment:
Q  193 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||| ||||| |||| | | |||||| |||||||||| ||||| ||||||||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 15410443 - 15410506
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||    
T  15410443 cgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgt 15410506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 38749554 - 38749614
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||    
T  38749554 tgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 43001879 - 43001807
Alignment:
Q  181 gacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| ||||||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  43001879 gacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 6471878 - 6471941
Alignment:
Q  190 catgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  6471878 catgtcccacacgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 39205970 - 39205887
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||| || ||||| |||| ||||| |||||||||||||| |||||||  |||||| | ||||||||||||||||||    
T  39205970 tcccggtgtcgggcacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattag 39205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 30502362 - 30502446
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  30502362 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 30542705 - 30542789
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  30542705 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 3966566 - 3966504
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| |||||||| ||||||||||||| ||| |||||||||||||||||| |||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgt 3966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 19737483 - 19737533
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  19737483 aacaccgacacatatgattgcattgaattatgtaattttctcaaattatta 19737533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 2548444 - 2548395
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||    
T  2548444 acaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 27932277 - 27932236
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  27932277 attacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 28296385 - 28296336
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  28296385 acaccaacacatatgagtacattgaattatgtcattttctcaaattatta 28296336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 17593718 - 17593774
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| |||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  17593718 gacacaccaccaacatatataattacactgaattacgtgattttctcaaattattag 17593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 23015964 - 23016040
Alignment:
Q  176 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||  |||| ||||||| |||||| | |||| ||| ||||||||||||||||| |||||||||||| ||||    
T  23015964 tgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 19293430 - 19293481
Alignment:
Q  208 aacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  19293430 aacacatatgattacacttaattatgttattttcttaaattattattggtgt 19293481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 31084413 - 31084330
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| |||||||||| ||||| |||||||||| ||| | |||| | | |||||| |||||||||| ||||| ||||||||||||    
T  31084413 tcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattag 31084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 31264489 - 31264446
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  31264489 acacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 38806839 - 38806906
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||| |||| ||||||||| ||||| ||||| |||| || |||||||||||||| ||||||    
T  38806839 tgtccgacacagcaccgacacatatgcttacattgaatcatgtcatattctcaaattattattggtgt 38806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 12264837 - 12264887
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| |||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 23221042 - 23220984
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||||||||| ||||| |||||||| ||||| |||||||||||| |||||    
T  23221042 caacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgt 23220984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 2419902 - 2419865
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||| |||||||||||||||||||||    
T  2419902 atgattacactgaattgtgtaattttctcaaattatta 2419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 2577190 - 2577231
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattatta 2577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 28588676 - 28588725
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||| ||| ||||||||||||||||| |||||||||||||||||    
T  28588676 acaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 35017085 - 35017040
Alignment:
Q  212 catatgattacactgaattatgtaattttctcaaattattagtggt 257  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattagtggt 35017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 43208265 - 43208322
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    |||| ||||||||||  ||| ||||||||||| |||||||||| ||||||||||||||    
T  43208265 tgtctgacacaacacagacagatatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 14873607 - 14873527
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||| ||||| ||||   ||||||||  ||||| |||||||| |||||||| ||||||||  ||||||||||||||    
T  14873607 tcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 18421815 - 18421890
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    |||||||| |||||||||||| |||||||| |     | |||||||| ||||||||| ||||||| |||||||||||||||    
T  18421815 tcccggtgccggacatgtgtcgtgtccgacgc-----cgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 18592138 - 18592074
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||||  ||||||| |||||| |||||||||||||||||| ||| |||||| |||||    
T  18592138 ccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgt 18592074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 21194219 - 21194259
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattattagtg 255  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  21194219 atgattacactgaattatgtgattttctcaaattactagtg 21194259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 22423806 - 22423870
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||| ||| |||| |||| | |||||||||| ||||||||||||||||||| ||||    
T  22423806 ccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgt 22423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 32766937 - 32767001
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||| ||||||||| |||||| |||||| ||  |||||||||||||||||| |||||    
T  32766937 ccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 40212020 - 40211964
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| ||||| | ||||||||||| | ||||||||||||||||||||| ||||||    
T  40212020 cgacacgacaccgatacatatgattatattgaattatgtaattttctcaatttatta 40211964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 41091265 - 41091309
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||    
T  41091265 acacatataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 6326314 - 6326345
Alignment:
Q  218 attacactgaattatgtaattttctcaaatta 249  Q
    ||||||||||||||||||||||||||||||||    
T  6326314 attacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 18607105 - 18607148
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||| |||||||||| |||||||||||||||||    
T  18607105 acacctatgattacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 23012382 - 23012460
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||| |||||||||| |||||     |||||| |||||||| |||||| | |||||| | ||||||||||||||||||    
T  23012382 tcccggtgtcagacatgtgtcgtgtcc-----aacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 24273039 - 24273078
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 24389175 - 24389136
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 32630743 - 32630786
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| |||||| |||||||| |||||||||||||||||||    
T  32630743 acacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 16203797 - 16203847
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| |||||||| |||||||  ||||||||||||||||||    
T  16203797 acaccgacacatataattacactaaattatgagattttctcaaattattag 16203847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 19168829 - 19168879
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||| |||| ||||| |||||||| ||| |||||    
T  19168829 acacatatgattacactgaataatgtgattttatcaaattaatagcggtgt 19168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 21194098 - 21194171
Alignment:
Q  171 cccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||||| |||||||||| |||||     |||||||| || ||| |||||||||||| |||| ||||||||||||||    
T  21194098 cccggtgtctgacatgtgtcgtgtcc-----aacaccaatacctataattacactgaatgatgtgattttctcaaatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 27144514 - 27144464
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||| |||||||| |||| ||||||||||||| |||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgt 27144464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 41600948 - 41600906
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  41600948 cacatatgattatattgaattgtgtaattttctcaaattatta 41600906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 4344787 - 4344750
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  4344787 atgattacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 11596469 - 11596506
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  11596469 atgattacattgaattatgtcattttctcaaattatta 11596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 19746717 - 19746750
Alignment:
Q  226 gaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||| |||||    
T  19746717 gaattatgtaattttctcaaattattagcggtgt 19746750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 26205768 - 26205805
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaa 246  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  26205768 acacctatgattacactgaattatgtcattttctcaaa 26205805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 34879401 - 34879352
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtg 258  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||| ||||    
T  34879401 acacatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 6035547 - 6035484
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||| ||| |||| ||||||||||||||| | | |||||||||||||||| |||||    
T  6035547 ccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgt 6035484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 9449510 - 9449470
Alignment:
Q  219 ttacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgt 9449470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 11685996 - 11685940
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||||||| |||||||  | |||||||||||||||| |||||    
T  11685996 acaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgt 11685940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 19438385 - 19438353
Alignment:
Q  218 attacactgaattatgtaattttctcaaattat 250  Q
    ||||||||||||||||| |||||||||||||||    
T  19438385 attacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 41558645 - 41558701
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatt 248  Q
    |||||||||| ||||  |||||| | |||||| |||||||||| |||||||||||||    
T  41558645 tgtccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 7658522 - 7658464
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7658522 caacaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 11803321 - 11803267
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 3508108 - 3508060
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 4611599 - 4611535
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||| | |||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  4611599 ccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 12559074 - 12559158
Alignment:
Q  170 tcccggtgtcggacatgtgtca-tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||||||| |||||  ||||||| |  ||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  12559074 tcccgttgtcggacacgtgtcggtgtccgagatgacaccaatacatatgattacactgaattatatcattttctcaaattattag 12559158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 13203688 - 13203646
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattattagtg 255  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtg 13203646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 34897136 - 34897086
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  34897136 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 4786340 - 4786396
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||||||||||||| ||||||| ||||||||| ||||||    
T  4786340 acaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgt 4786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 18646229 - 18646173
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  18646229 acaccaacatatatgattacactgaatcatgtcattttttcaaattattactggtgt 18646173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 22493555 - 22493495
Alignment:
Q  199 cacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| | ||||||| ||||||||    
T  22493555 cacaacaccgacatatatgattacactgaattatgtgattttttaaaattatcagtggtgt 22493495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 37225753 - 37225801
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattattattggtgt 37225801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 7442905 - 7442846
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| | | ||||||||||||||||||||||| | |||||||||| |||||    
T  7442905 acaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 14134756 - 14134705
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagt 254  Q
    ||||| ||| |||| ||||||||||||||||| |||||||||||||||||||    
T  14134756 acaccgacatatataattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 14634136 - 14634199
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| |||||    
T  14634136 cgacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgt 14634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 11927083 - 11927137
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||| |||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 13844598 - 13844648
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  13844598 acaccgacacatataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 14513187 - 14513225
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  14513187 tatgattacgctgaattatgtaattttctcaaattatta 14513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 24362210 - 24362260
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||| |||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgt 24362260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 12985449 - 12985400
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||| ||||||||||| |||||||||| |||||||||||||||||    
T  12985449 acaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 31236580 - 31236629
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| |||||||| |||||| |||||||||| ||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 39954288 - 39954337
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| |||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgt 39954337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 40063997 - 40063952
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||    
T  40063997 tatgattacaatgaattatgtcattttctcaaattattattggtgt 40063952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 3025602 - 3025558
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  3025602 acacctataattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 14731763 - 14731719
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattag 14731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 20679397 - 20679453
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||| ||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  20679397 acaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgt 20679453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 29198490 - 29198530
Alignment:
Q  212 catatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  29198490 catatgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 4122245 - 4122300
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||| || ||||||||    
T  4122245 gacacaacaccgacacatataattacaatgaattatataattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 28883886 - 28883929
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||    
T  28883886 acacctatgattccactgaattatgtcattttctcaaattatta 28883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 11944727 - 11944673
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||| |||||||| |||||||||| |||||| ||||| |||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 12606831 - 12606881
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| |||||| |||||||| | ||||||||||||||||||    
T  12606831 acaccgacacatataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 18067954 - 18067992
Alignment:
Q  221 acactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgt 18067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 24669475 - 24669441
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||||| ||||||||||||    
T  24669475 attacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 33389356 - 33389410
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    |||||| ||||||||||||||||||| ||| ||||||||  |||||||| |||||    
T  33389356 cgacacgacaccaacacatatgattatacttaattatgttcttttctcatattat 33389410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 33405362 - 33405435
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| |||||||||| ||||||||||     | |||||||| |||||||| ||||||||  ||||||||||||||||    
T  33405362 ggtgtcagacatgtgtcgtgtccgacac-----cgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 15816126 - 15816187
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||| ||| |||||||| |||||||| ||||| ||||||||||||| ||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgt 15816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 16641943 - 16642032
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||  ||||  |||| |||||||||| ||||| |||||||| |  ||||| ||||||||   ||||||||||||||||| ||||    
T  16641943 tcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattattagttgtgt 16642032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 27067323 - 27067356
Alignment:
Q  226 gaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||| |||||||||||    
T  27067323 gaattatgtaattttctcaaatcattagtggtgt 27067356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 28819256 - 28819199
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| ||| |||||||||||| || ||| |||||  |||||||||||||||||    
T  28819256 ccgacacaaaaccgacacatatgattgcattgagttatgccattttctcaaattatta 28819199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 33382021 - 33382070
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||    
T  33382021 acaccgacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 34201056 - 34201097
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| |||||| |||||||||| |||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 36934724 - 36934671
Alignment:
Q  206 ccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||| |||||| |||||||||| ||||| || ||||||||| |||||    
T  36934724 ccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 40332233 - 40332200
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatt 251  Q
    ||||||||||||||||| ||||||||||||||||    
T  40332233 attacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 4948694 - 4948658
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagt 254  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4948694 attacactgaattatgtgattttttcaaattattagt 4948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 14227263 - 14227223
Alignment:
Q  219 ttacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  14227263 ttacattgaattatgttattttctcaaattattattggtgt 14227223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25172694 - 25172750
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||| |||||||| |||||| | || ||||||||||| ||||||||||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattag 25172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 26418350 - 26418390
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  26418350 acacatatgattacactgaataatatgattttctcaaatta 26418390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 29447128 - 29447168
Alignment:
Q  219 ttacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  29447128 ttacattgaattatgtgattttctcaaattattagttgtgt 29447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 37283827 - 37283867
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtg 258  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  37283827 attacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 36635415 - 36635325
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| |||  ||||| |||| |||||  |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  36635415 tcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgt 36635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 18513232 - 18513292
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||    
T  18513232 tgtccgacacaacactgacacatatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 46180941 - 46180986
Alignment:
Q  206 ccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46180941 ccaacacatatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 15659752 - 15659812
Alignment:
Q  193 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||| |||||||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  15659752 gtccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattag 15659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 7012131 - 7012074
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||| | || |||||| |||||||||||||| |||||||||||||||||    
T  7012131 ccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattatta 7012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 20743284 - 20743329
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  20743284 caacacctatgattacactgaattatgtcattttctcaaattatta 20743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 40784014 - 40783965
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  40784014 acaccaacacatatgattacgctgaattatgttattatctcaaattatta 40783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 5775360 - 5775416
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  5775360 acaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgt 5775416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 21945585 - 21945510
Alignment:
Q  173 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||||||||||||||     ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  21945585 cggtgtcggacatgtgtcatgtccg-----acaccgacacttgtaattacactgaattatgtcattttttcaaattattag 21945510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 3947739 - 3947818
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||| ||||| |||||||||| ||||  |||| | | ||||||||||||||||  ||||| ||||||||||||    
T  3947739 ggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattag 3947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 18576039 - 18576086
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  18576039 acaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 24343558 - 24343515
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||| |||||||||||||||||||||||||||||||||||    
T  24343558 acacctataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 29205529 - 29205451
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||||| |||||     |||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  29205529 tcccggtgtcggacatgtgtcgtgtcc-----aacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 31243556 - 31243599
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  31243556 acacctatgattacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 43299983 - 43300022
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43299983 atatgattacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 43300663 - 43300624
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43300663 atatgattacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 15029822 - 15029772
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||| ||||||||||||||||| || || ||||||||||||    
T  15029822 acaccaacacatataattacactgaattatgtgatattttcaaattattag 15029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 22440609 - 22440651
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 33950193 - 33950143
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||||||||||||| | |||||||| ||||||||||||||||||    
T  33950193 acaccgacacatatgattacattaaattatgtgattttctcaaattattag 33950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 40613501 - 40613451
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||| |||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgt 40613451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 55941011 - 55941061
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| ||||||    
T  55941011 acacatatgattatactaaattatgtaattttcttaaattattattggtgt 55941061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 903971 - 903930
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 8423735 - 8423776
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  8423735 attacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 7214524 - 7214580
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| || ||||| |||||| | |||||||| ||||||||||||||||||||||||    
T  7214524 acaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgt 7214580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 17446116 - 17446072
Alignment:
Q  215 atgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||    
T  17446116 atgattacactaaattatgtgattttcttaaattattagtggtgt 17446072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 30103359 - 30103406
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  30103359 acaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 37698759 - 37698719
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  37698759 atataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 54580025 - 54580081
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||    
T  54580025 acaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgt 54580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 5654599 - 5654642
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||| |||||||||| |||||||||||||||||    
T  5654599 acacgtatgattacattgaattatgtcattttctcaaattatta 5654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 14465302 - 14465345
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||| | |||||||||| |||||||||||||||||    
T  14465302 acacatatgattaaattgaattatgtcattttctcaaattatta 14465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 16189765 - 16189710
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| || ||||||||||||||||| ||||||||||||| |||| |||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 30982872 - 30982935
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 258  Q
    ||||||| ||||| |||| ||| ||||||||||| ||||| |||||||||||| ||||| ||||    
T  30982872 ccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 37496800 - 37496718
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccg------acacaacaccaacacatatgattacactgaattatgtaattttctcaaa 246  Q
    |||||||||| |||||||||| ||||||      |||||||||| |||| | |||||||| |||||||||| |||||||||||    
T  37496800 tcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcattttctcaaa 37496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 4672087 - 4672137
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||||||   |||||||||||||||||||||| |||||||||||    
T  4672087 acaccgacacatatagctacactgaattatgtaattttcccaaattattag 4672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 6933326 - 6933276
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| |||||||||||  ||||||| | ||||||||||||||    
T  6933326 acacatatgattaaactgaattatgagattttcttacattattagtggtgt 6933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 10546194 - 10546156
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  10546194 tatgattacattgaattatgtcattttctcaaattatta 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 11110254 - 11110212
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  11110254 acacatatgattacatcgaattatgtcattttctcaaattatt 11110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 15835640 - 15835690
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaa-ttttctcaaattatta 252  Q
    |||||||||||||||||||||| ||||||| ||| |||| |||||||||||    
T  15835640 acaccaacacatatgattacacggaattatataatttttttcaaattatta 15835690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 22596988 - 22597038
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||||||  ||||||||| |||||||||||||||||| ||||||    
T  22596988 acacatgtgattacgttgaattatgcaattttctcaaattattattggtgt 22597038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 32910593 - 32910559
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||||| |||||||||||||||||    
T  32910593 attacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 36386213 - 36386267
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 257  Q
    |||||||||| | | |||||||||||||||||  |||||||||||||||| ||||    
T  36386213 acaccaacacctttaattacactgaattatgtccttttctcaaattattattggt 36386267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 51701323 - 51701265
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| |||| ||||| | | |||||||| |||||||||||||| ||||||||||||    
T  51701323 ccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattag 51701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 56488518 - 56488568
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||| ||||||||| | ||||||||||||| |||| |||||    
T  56488518 acacatatgattaccctgaattatatgattttctcaaattgttagcggtgt 56488568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 30522920 - 30522973
Alignment:
Q  206 ccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||  |||||||||||||||| |||||||||||| ||||| |||||    
T  30522920 ccaacatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 38148742 - 38148783
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  38148742 attacactgaattatgtgattttctcaaactattagcggtgt 38148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 40179614 - 40179694
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||||||| ||||||||||     | || ||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  40179614 ggtgtcgaacatgtgtcgtgtccgacac-----cgacgcatataattacactgaattatgtgattttttcaaactattaatggtgt 40179694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 46160961 - 46160912
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctca 244  Q
    ||||||| ||||| |||||||| || |||||||||||||| |||||||||    
T  46160961 ccgacacgacaccgacacatataataacactgaattatgttattttctca 46160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 847986 - 847958
Alignment:
Q  225 tgaattatgtaattttctcaaattattag 253  Q
    |||||||||||||||||||||||||||||    
T  847986 tgaattatgtaattttctcaaattattag 847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 7970587 - 7970535
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctca 244  Q
    |||| ||||| ||||||| |||||| ||||||||||||||| | |||||||||    
T  7970587 tgtctgacacgacaccaaaacatataattacactgaattatatgattttctca 7970535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 9906842 - 9906782
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||| ||||||| ||||||||||| | |||||  | |||||||| ||||||||    
T  9906842 tgtccgacacaaaaccaacatatatgattacattcaattaatttattttctctaattatta 9906782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattatt 251  Q
    |||||| |||| |||||||||||| ||||||||||||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 11596348 - 11596404
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 19482733 - 19482669
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||||||||| | | ||||||| ||||||||| || || ||||||||||||| ||||    
T  19482733 ccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgt 19482669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 21658840 - 21658872
Alignment:
Q  227 aattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||||||||||    
T  21658840 aattatgtgattttctcaaattattagtggtgt 21658872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 24613719 - 24613759
Alignment:
Q  219 ttacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  24613719 ttacattgaattatgtgattttctcaaattattagttgtgt 24613759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 40742656 - 40742592
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||| | |||||||| ||||||||  ||||| | ||||||||||||||||| ||||||    
T  40742656 ccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgt 40742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 49659525 - 49659573
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||||| || |||||||||||| |||||| | ||||||||||||||||    
T  49659525 acaccaaaacctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 5409805 - 5409888
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| | | ||| ||||||||||||| ||||| ||||||||||||    
T  5409805 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 4909202 - 4909152
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  4909202 acacatatgattacaatgaattatgtaattttctcaaattattattggtgt 4909152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 27945104 - 27945042
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgt 27945042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 23128658 - 23128719
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgt 23128719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 5233697 - 5233637
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  5233697 tgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 5835304 - 5835248
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  5835304 acaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 8160481 - 8160417
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| | |||||||||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  8160481 ccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 15902887 - 15902823
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||| ||||||    
T  15902887 ccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgt 15902823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 36314626 - 36314678
Alignment:
Q  200 acaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  36314626 acaacaccaacacatatgattacattgaaatatgtcattttctcaaattatta 36314678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 7758390 - 7758323
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| ||||| ||||| || |||| |||||||||| ||||||||| ||||||||||||||||    
T  7758390 tgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgt 7758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 21880233 - 21880159
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||     | |||| | | ||||||||||||||||||||||||||||||||||||    
T  21880233 ggtgtcggacatgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatgtaattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 1433540 - 1433462
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||  |||| |||||||||| ||||| |||||||| |||||||  ||| |||| |||||||||||||||||    
T  1433540 ggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 22868093 - 22868043
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgt 22868043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 44172887 - 44172941
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||    
T  44172887 acacaacacaaacacatgtgattacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 7328686 - 7328743
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 13770779 - 13770698
Alignment:
Q  172 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||| ||||  |||||||||| ||| | |||| | | ||||||||||||||||||||||| | ||||||||||    
T  13770779 ccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattag 13770698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 29787373 - 29787427
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 32093990 - 32094079
Alignment:
Q  171 cccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgt-aattttctcaaattattagtggtgt 259  Q
    |||||||||||||| ||||| |||||||||| ||||| |||  | | ||||||||||||||||| | |||| ||||||||||||| ||||    
T  32093990 cccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 32308213 - 32308121
Alignment:
Q  173 cggtgtcggacatgtgtcatgtcc------gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||| |||||      ||||| ||||  |||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  32308213 cggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgt 32308121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 9778590 - 9778510
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||||||||| ||||  |||||||||| ||||| |||| | | |||| |||||||||||| ||||| |||||||||    
T  9778590 tcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 16341564 - 16341504
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||| |||||  ||||||| |||||||| |||||||| |||||||||||||||||    
T  16341564 tgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 20549848 - 20549792
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  20549848 acaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 5548744 - 5548677
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| ||||  |||||||| ||||||||||||||| | ||||||||||||||| || |||||    
T  5548744 tgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgt 5548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 21138969 - 21139044
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| || ||||||||||||| ||||| |||||||| |||||| | |||||||  |||||||||||||||||    
T  21138969 ggtgtcggacacgtatcatgtccgacacgacaccgacacatataattacagt-aattatg--attttctcaaattatta 21139044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 22484104 - 22484026
Alignment:
Q  176 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||| |||||     | |||||||| |||| ||||||||||| |||||||| |||||||||| |||||    
T  22484104 tgtcggacatgtgtcatgtctgacac-----cgacacatataattatactgaattatgcaattttctaaaattattagcggtgt 22484026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 22602705 - 22602756
Alignment:
Q  196 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaat 247  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 27732247 - 27732290
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  27732247 acacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 30813854 - 30813819
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||||||||||||||||||||    
T  30813854 attacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 38134414 - 38134457
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  38134414 acacatatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 43027438 - 43027521
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||| | |  |||||||| ||||||| ||||| ||||||||||||    
T  43027438 tcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattag 43027521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 3142072 - 3142130
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||| ||||||||||||||| |||||||| | |||| ||||| |||||||    
T  3142072 ccgacacaacaccgacacatatgattacattgaattatatgatttactcaatttattag 3142130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 6630920 - 6630970
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||||||||| || | ||||||||||||||||||||||    
T  6630920 acacatataattacactgaattaagtgactttctcaaattattagtggtgt 6630970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 18013082 - 18013132
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||| ||||    
T  18013082 acacatataattacactgaattatgtaatttttttaaattattagtagtgt 18013132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 23930272 - 23930230
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaatta 249  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  23930272 caacacctatgattacactgaattatgtcattttctcaaatta 23930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 31808502 - 31808560
Alignment:
Q  194 tccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| |||||||||||| |||||||| ||| || ||| |||||||||||||||||    
T  31808502 tccgacacgacaccaacacatgtgattacattgacttgtgtcattttctcaaattatta 31808560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||||||| |||| | |||||||||| |||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 21247738 - 21247787
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| ||||||||| ||||||| || |||||||||||||||||    
T  21247738 acaccaacacacatgattacattgaattacgtcattttctcaaattatta 21247787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 28155612 - 28155571
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  28155612 attacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 32287437 - 32287521
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||  |||||||||||||||     | ||||||||  || ||||||||||||| ||||||||| |||||||| |||||    
T  32287437 tcccggtgtcggacacttgtcatgtccgacac-----cgacacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 7133291 - 7133327
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7133291 tatgattacactgaattatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 7546217 - 7546161
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| |||||||| ||| |||||||||| ||||| ||||||||||| ||||||    
T  7546217 acaccaacccatatgatcacattgaattatgtcattttgtcaaattattactggtgt 7546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 10043029 - 10042938
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccg--acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||| | ||||  |||| ||||  |||| ||| ||||| || |||||||| | ||| ||||||||||||||||||    
T  10043029 tcccggtgtcggacatgtgtcgtatccggtacacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgt 10042938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 17851482 - 17851438
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattag 17851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 19206107 - 19206051
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||| | |||||||||| |||||||||||||||||| |||||    
T  19206107 acaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgt 19206051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 33384573 - 33384633
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||| |||||||||||||| |||||||| ||||||   ||||||||| |||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattatta 33384633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 2424656 - 2424621
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2424656 attacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 9482991 - 9482944
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||||||||    
T  9482991 acaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 12278886 - 12278843
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||    
T  12278886 acacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 44021034 - 44020983
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||    
T  44021034 caacaccgacagatatggttacattgaattatgtaattttttcaaattatta 44020983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 3721150 - 3721100
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| |||| ||| |||||||| ||||||||||||||||||    
T  3721150 acaccgacacatataattatactaaattatgtgattttctcaaattattag 3721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 19992058 - 19992008
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  19992058 acaccgacacttataattacactgaaatatgtgattttctcaaattattag 19992008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 251
Target Start/End: Complemental strand, 24289859 - 24289829
Alignment:
Q  221 acactgaattatgtaattttctcaaattatt 251  Q
    |||||||||||||||||||||||||||||||    
T  24289859 acactgaattatgtaattttctcaaattatt 24289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 24339707 - 24339649
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  24339707 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 25481959 - 25481909
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||||||||| | | ||||||||||||||||| ||||| ||||||||||||    
T  25481959 acaccaacacttgtaattacactgaattatgtgattttttcaaattattag 25481909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 46644687 - 46644745
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| | ||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  46644687 caacaacaacatagatgattacactaaattatataattttttcaaattattattggtgt 46644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 2525846 - 2525895
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||||||||||||| | |||||||||| |||| ||||||||||||    
T  2525846 acaccgacacatatgattatattgaattatgtcatttgctcaaattatta 2525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 23191938 - 23191897
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  23191938 attacactgaaatatgtgattttctcaaattattagcggtgt 23191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 26329376 - 26329433
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| || || |||||||| ||||||||||||| |||  ||||||||||||||||    
T  26329376 ccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 30731079 - 30731046
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatt 251  Q
    ||||||||||||||||| ||||||||||||||||    
T  30731079 attacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 38143280 - 38143231
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||| |||||| | |||||||| ||||| |||||||||||    
T  38143280 acaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 8046008 - 8046085
Alignment:
Q  179 cggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| |||||||||||||| |  | ||||||||| || |||||||||||||     ||||||||||||||||||||||||    
T  8046008 cggacacgtgtcatgtccgaccccgataccaacacagataattacactgaattg----attttctcaaattattagtggtgt 8046085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 8090027 - 8090083
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||   ||||||||||||| || || ||||||||||| |||||||||    
T  8090027 acaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgt 8090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 11890910 - 11890970
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||| ||||| ||||  || ||||||||||||||| | ||||| |||||||||||    
T  11890910 tgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 18233606 - 18233646
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaatta 249  Q
    |||| ||| ||||||||||||||||| ||||||||||||||    
T  18233606 acacctataattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 26733361 - 26733305
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||| | |||| |||||||||||| ||||| |||||||||||| |||||    
T  26733361 acaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 37742580 - 37742524
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| |||||| ||||| ||| |||||| | ||||||||||||||||    
T  37742580 acaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgt 37742524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 38630009 - 38629965
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaa 246  Q
    |||||| |||||||| ||||||| ||||||||| |||||||||||    
T  38630009 aacacctacacatattattacacagaattatgtcattttctcaaa 38629965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 9744 - 9802
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 256  Q
    |||| ||||| |||||||| |||||||||||||| || |||||||||||||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtgg 9802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 18889593 - 18889643
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  18889593 acaccgacacatatgattacactgaattatgtgattttctcaatttattag 18889643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 21616813 - 21616763
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 21616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 2665884 - 2665946
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||  ||||||| |||||||| |||||||| ||||||| ||||||||||||||||    
T  2665884 ccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 5367277 - 5367197
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtg 255  Q
    |||||| |||||| ||||||| ||||||||||     | |||||||| ||||||||||||||||| |||| |||||||||||||||    
T  5367277 tcccggagtcggatatgtgtcgtgtccgacac-----cgacacatataattacactgaattatgtgatttcctcaaattattagtg 5367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 44860382 - 44860321
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 30527570 - 30527646
Alignment:
Q  176 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||| |||||| |||||| | ||| |||||||| |||||||| |||||| | |||||||||||||||||    
T  30527570 tgtcgaacatgtctcatgtgcgacacgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 42832278 - 42832334
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |||||    
T  42832278 acaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 10535767 - 10535810
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  10535767 acacttatgattacactgaattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 12668417 - 12668476
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagt 254  Q
    ||||||| ||||| |||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  12668417 ccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagt 12668476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 18571023 - 18570980
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  18571023 acacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 23718082 - 23718027
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 24105754 - 24105699
Alignment:
Q  204 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| |||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 4229416 - 4229466
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  4229416 acacatatgattacactgaattatgtcattctcttaaattattattggtgt 4229466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 23921295 - 23921261
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    |||||||||||||||||||||||||||||||||||    
T  23921295 attacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 29970557 - 29970607
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  29970557 acacatatgattacactgaactatgcgattttctcaaattattagcggtgt 29970607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 37411252 - 37411302
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| || |||||||||||||| |||||||||||||||||| |||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgt 37411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 2415374 - 2415325
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 12748737 - 12748692
Alignment:
Q  207 caacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||    
T  12748737 caacacctatgattacactgaactatgtcattttctcaaattatta 12748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 18622669 - 18622612
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagt 254  Q
    ||||| |||||||||| ||| ||||||||||||||||| ||||| | |||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 18840987 - 18841071
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||| |||| |||||     | |||| | | |||||||| |||||||||||||| ||||||||||||| ||||    
T  18840987 tcccggtgtcggacatgtgtcgtgtctgacac-----cgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgt 18841071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 28121550 - 28121607
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||| |||||| ||| |||||  ||||||||||||||||| ||||||    
T  28121550 aacaccaacacatataattacattgatttatgccattttctcaaattattaatggtgt 28121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 34006993 - 34007042
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||| ||||||||||||||||||||| | |||||||||||||||    
T  34006993 acaccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 36281734 - 36281693
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 39323306 - 39323265
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  39323306 attacactgaattatgtaattttgtcaaattattagcggtgt 39323265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 40361756 - 40361805
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||| |||||||| |||||||||||||| |||||||||||    
T  40361756 acaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 41843531 - 41843462
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattt 239  Q
    |||| |||||||||| |||||  ||||||||||||||| |||||||| |||| || ||||||||| ||||    
T  41843531 tccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 15909641 - 15909677
Alignment:
Q  210 cacatatgattacactgaattatgtaattttctcaaa 246  Q
    ||||||| |||||||||||||||||||||||||||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaa 15909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 18276578 - 18276522
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| ||||| || |||||||||||||| || |||||||||||||||||| |||||    
T  18276578 acaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgt 18276522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18420430 - 18420486
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||| |||| ||| ||| || |||||||||| ||||||||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattag 18420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 19613620 - 19613664
Alignment:
Q  208 aacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||    
T  19613620 aacacatatcattacattgaattatgttattttctcaaattatta 19613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 25846783 - 25846743
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtg 258  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25846783 attacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 28677958 - 28677910
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 2331834 - 2331795
Alignment:
Q  220 tacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  2331834 tacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 17520080 - 17520119
Alignment:
Q  211 acatatgattacactgaattatgtaattttctcaaattat 250  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  17520080 acatatgattacactgaattatgtgattttcttaaattat 17520119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 21374716 - 21374751
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21374716 attacactgaattatgtaattttttcaaattattag 21374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 21782835 - 21782870
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21782835 attacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 24011087 - 24011044
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||||| |||||||| |||||||||||||||||    
T  24011087 acacctatgattacactaaattatgtcattttctcaaattatta 24011044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 25544532 - 25544489
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| ||||||||||||||||||| | |||||||||||||||||    
T  25544532 acacctatgattacactgaattatatcattttctcaaattatta 25544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 35449564 - 35449521
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 39279734 - 39279683
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||| |||||||    
T  39279734 caacaccgacacatataattacactgaattatttgattttctcatattatta 39279683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 44776667 - 44776608
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    |||||||||| ||||| ||| ||||||||||||||| |||||| ||||||  ||||||||    
T  44776667 tgtccgacacgacaccgacatatatgattacactgagttatgtcattttcataaattatt 44776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 31808128 - 31808078
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||| |||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 34691807 - 34691857
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| ||||||||||||||| | ||||| ||||||||||||    
T  34691807 acaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 34714219 - 34714269
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| ||||||||||||||| | ||||| ||||||||||||    
T  34714219 acaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 44605140 - 44605190
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||||| |||||| | |||||| |||||||||| |||||||||||||||||    
T  44605140 aacaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 8300219 - 8300264
Alignment:
Q  201 caacaccaacacatatgattacactgaattatgtaattttctcaaa 246  Q
    ||||||| |||| |||||||||||| |||||||| |||||||||||    
T  8300219 caacaccgacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 11308012 - 11308053
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattat 250  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  11308012 acacctatgattacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 22085061 - 22085012
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||||| ||||||||||| |||||||| ||||||| |||||||||    
T  22085061 acaccgacacaaatgattacactaaattatgtcattttcttaaattatta 22085012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 31026752 - 31026703
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||| ||||||||||| |||||||||| ||||||| |||||||||    
T  31026752 acaccgacatatatgattacattgaattatgtcattttcttaaattatta 31026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 36756341 - 36756402
Alignment:
Q  198 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||| |||| ||| ||||||||||||||||| ||||  ||||||||||||| ||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgt 36756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 45000848 - 45000893
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaatt 248  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||    
T  45000848 acaccgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 896262 - 896218
Alignment:
Q  209 acacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  896262 acacatatgattacattgaaatatgtgattttctcaaactattag 896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 20242729 - 20242785
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||  |||||| ||||    
T  20242729 acaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgt 20242785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 38355889 - 38355933
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaat 247  Q
    ||||| |||||||| || |||||||||||||| ||||||||||||    
T  38355889 acaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 135303 - 135364
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    |||| ||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||||||||    
T  135303 tgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattag 135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 137843 - 137789
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  137843 gacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 92849 - 92808
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92849 attacactgaattatgtaattttctcaaattattagcggtgt 92808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 1100 - 1036
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| ||||  ||||||||  |||||||||||||||||||||| |||||||||||| |||||    
T  1100 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 44519 - 44583
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||| | ||| |||||||| ||||||||||||||||| ||||||||||||| |||| |||||    
T  44519 ccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 53276 - 53189
Alignment:
Q  170 tcccggtgtcggacatgtgtcatgtccgacacaa------caccaacacatatgattacactgaattatgtaattttctcaaattatt 251  Q
    ||||||||||||||| ||||||||||||||||        |||| |||| ||| ||||||||||||||||| ||||||||||||||||    
T  53276 tcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 99956 - 99901
Alignment:
Q  197 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaaattatta 99901  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 90890 - 90844
Alignment:
Q  213 atatgattacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||| ||||||||||||||| | ||||||||||||||||| ||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 18099 - 18153
Alignment:
Q  192 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaa 246  Q
    ||||||||||||||||||||| |  ||||||| |||||||||| |||||||||||    
T  18099 tgtccgacacaacaccaacacttgcgattacattgaattatgttattttctcaaa 18153  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 28919 - 28858
Alignment:
Q  191 atgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||  ||||||| |||||||||    
T  28919 atgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattatta 28858  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 63811 - 63774
Alignment:
Q  222 cactgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||||||||||||||||||||||||| |||||    
T  63811 cactgaattatgtaattttctcaaattattagcggtgt 63774  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 56987 - 56932
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 250  Q
    ||||||| ||||  |||| ||||||||||||||||||| | |||||||||||||||    
T  56987 ccgacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 240023 - 240072
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||||||    
T  240023 acaccgacacatatgattacattgaattatattattttctcaaattatta 240072  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 23496 - 23440
Alignment:
Q  184 atgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 240  Q
    ||||||| |||||||||| ||||| |||| ||| ||||||||||||||||| |||||    
T  23496 atgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 23440  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 8066 - 8104
Alignment:
Q  214 tatgattacactgaattatgtaattttctcaaattatta 252  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  8066 tatgtttacactgaattatgtcattttctcaaattatta 8104  T

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Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 6369 - 6319
Alignment:
Q  203 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||| |||||||| |||||| ||||||||| |||||| ||||||||||||    
T  6369 acaccgacacatataattacattgaattatgcaattttgtcaaattattag 6319  T

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Target: scaffold0320 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 17037 - 17087
Alignment:
Q  202 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||||||| |||||| ||| |||||  |||||||||||||||||    
T  17037 aacaccaacacatataattacattgatttatgccattttctcaaattatta 17087  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 26428 - 26394
Alignment:
Q  225 tgaattatgtaattttctcaaattattagtggtgt 259  Q
    |||||||||| ||||||||||||||||||||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgt 26394  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 70359 - 70286
Alignment:
Q  174 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 252  Q
    ||||||||||| ||||| ||||||||||     | |||| ||| ||||||||||||||||| ||||| |||||||||||    
T  70359 ggtgtcggacacgtgtcgtgtccgacac-----cgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 192266 - 192300
Alignment:
Q  218 attacactgaattatgtaattttctcaaattatta 252  Q
    ||||||| |||||||||||||||||||||||||||    
T  192266 attacaccgaattatgtaattttctcaaattatta 192300  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 263366 - 263424
Alignment:
Q  195 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 253  Q
    ||||||| ||||  |||| ||| |||||||||||||||||  |||||||||||||||||    
T  263366 ccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattag 263424  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 14572 - 14531
Alignment:
Q  218 attacactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  14572 attacactgaattatgtgattttttcaaattattagttgtgt 14531  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 13438 - 13401
Alignment:
Q  222 cactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgt 13401  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 21889 - 21926
Alignment:
Q  222 cactgaattatgtaattttctcaaattattagtggtgt 259  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgt 21926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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