View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21175_low_22 (Length: 298)
Name: NF21175_low_22
Description: NF21175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21175_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 10 - 278
Target Start/End: Complemental strand, 5014833 - 5014558
Alignment:
| Q |
10 |
gcagagacctcaaaaccctttataatgtggccacaatttagaaccatgtttggatgtatgtgttcatgagtttctctctagtggtttcatgattgatgat |
109 |
Q |
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| T |
5014833 |
gcagagacctcaaaaccctttataatgtggccacaatttagaaccatgtttggatgtatgtgttcatgagtttctctctagtggtttcatgattgatgat |
5014734 |
T |
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| Q |
110 |
catgtgttaatgtaaaaaacttggtatgcattatgtatgttgtttcttagatggtgttaacgtgttcaaagggattgta--------attcatgtagttg |
201 |
Q |
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| T |
5014733 |
catgtgttaatgtaaaaaacttggtatgcattatgtatgttgtttcttagatggtgtt-acgtattcaaagggattgtaatagtgatattcatgtagttg |
5014635 |
T |
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| Q |
202 |
ttggagtgtccttttgatcagaaaggaactcactaactgtccttacgaagtttgcttgattcaaactcatgtctctg |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5014634 |
ttggagtgtccttttgatcagaaaggaactcactaactgtccttacgaagtttgcttgattcaaactcatgtctctg |
5014558 |
T |
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