View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21176_high_2 (Length: 602)
Name: NF21176_high_2
Description: NF21176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21176_high_2 |
 | |
|
| [»] scaffold0248 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 575; Significance: 0; HSPs: 41)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 10 - 584
Target Start/End: Original strand, 10494694 - 10495268
Alignment:
| Q |
10 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgc |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494694 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgc |
10494793 |
T |
|
| Q |
110 |
aggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctatttt |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494794 |
aggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctatttt |
10494893 |
T |
|
| Q |
210 |
gagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtg |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494894 |
gagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtg |
10494993 |
T |
|
| Q |
310 |
attcctaggaacacttccatccctgtcaagatgactaaaatattttatacagctggagataattgtggtgtctcttttaacgtatatgagggtgagagag |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494994 |
attcctaggaacacttccatccctgtcaagatgactaaaatattttatacagctggagataattgtggtgtctcttttaacgtatatgagggtgagagag |
10495093 |
T |
|
| Q |
410 |
caagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgcttttccattgatgaaaa |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10495094 |
caagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgcttttccattgatgaaaa |
10495193 |
T |
|
| Q |
510 |
tggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10495194 |
tggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
10495268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 151 - 584
Target Start/End: Original strand, 13333829 - 13334262
Alignment:
| Q |
151 |
atgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgag |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
13333829 |
atgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagactgtcccgaacttggtgctacgag |
13333928 |
T |
|
| Q |
251 |
atgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaagatgactaaaat |
350 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13333929 |
atgttatcccattatcacttggtatttcagtat---atgaacatatcatgaatgttgtgattcctaggaacacttccatccctgtcaagaagactaaagg |
13334025 |
T |
|
| Q |
351 |
a---ttttatacagctggagataattgtggtgtctcttttaacgtatatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcg |
447 |
Q |
| |
|
| | ||||||||||| |||||||||| |||||||| || | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
13334026 |
aggatattatacagctgaagataattgttgtgtctctattgatgtatatgagggtgagagagcaagagctagtgacaataatctacttggttcatttttg |
13334125 |
T |
|
| Q |
448 |
cttggttatgtttcaggtcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacag |
547 |
Q |
| |
|
|||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13334126 |
cttgattatgttccaggtccgcgtggtcagcccttggaggtatgcttttccattgatgaaaatggcatcctgacggttactgctaaggatatatctacag |
13334225 |
T |
|
| Q |
548 |
gcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13334226 |
gcaatatgaacgcgatcaccattactaatgacaaaga |
13334262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 13 - 584
Target Start/End: Complemental strand, 8654295 - 8653718
Alignment:
| Q |
13 |
aatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcagg |
112 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
8654295 |
aatattgttgacagttgtctcagagattcaaagatatacaagaatgatattgatgatgttgtactcgtgggtggctcgtctaggattcccaaagtgcagg |
8654196 |
T |
|
| Q |
113 |
atctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
212 |
Q |
| |
|
||||||||||||| |||||||||||||||| || || ||| ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
8654195 |
atctattgctagagtttttcaaggggaaggctttgtttatgaatatcaacccagatgaggctattgcatatggcgctgctgttcaggctgctattttgag |
8654096 |
T |
|
| Q |
213 |
tgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattg---aagtaacaaat---gaagatatcatggatgtg |
306 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | || |||| || ||| |||||||||||||| |
|
|
| T |
8654095 |
tgaagactttaagaatgtccccaacttggtgctacgtgatgttaccccattgtcacttggtatcgcaacagcaacatattgggaaaatatcatggatgtg |
8653996 |
T |
|
| Q |
307 |
gtgattcctaggaacacttccatccctgtcaagatgactaaaatattttatacagctggagataattgtggtgtctcttttaacgtatatgagggtgaga |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||| || || ||||||| |||||||||||||| |||| ||| || ||||||||||||| |
|
|
| T |
8653995 |
gtgattcctaggaacacttccatccctgtcaaaaatactaaaggatattgtacagctatagataattgtggtgcctctattattgtttatgagggtgaga |
8653896 |
T |
|
| Q |
407 |
gagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgcttttccattgatga |
506 |
Q |
| |
|
|| ||||||||||||| |||||||| ||||||| |||| | ||| || || ||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8653895 |
gaccaagagctagtgacaataatctgcttggtttatttacactttcttgccttccaggtccccgtggtcagcccttggaggtatgcttttccattgatga |
8653796 |
T |
|
| Q |
507 |
aaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
|||||| ||| | |||||| ||| ||||||||| | || || | | |||||| ||||||||| |||||||| ||||| |
|
|
| T |
8653795 |
aaatggtatcttaactgtttctggtaaggatatcaccactggaattctgaacgagatcaccatcactaatgagaaaga |
8653718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 10 - 340
Target Start/End: Complemental strand, 8667267 - 8666937
Alignment:
| Q |
10 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgc |
109 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
8667267 |
atgaatatagttgacacctgtctcagggattcaaagatatacaagaatgatattgatgatgttgtacttgtcggtggctcgtctaggattcccaaagtgc |
8667168 |
T |
|
| Q |
110 |
aggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctatttt |
209 |
Q |
| |
|
|||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8667167 |
aggaacaattgctagaatatttcaaggggaaggaattattcatgggtatcaacccagacgaggctgttgcttatggtgcagctgttcaggctgctatttt |
8667068 |
T |
|
| Q |
210 |
gagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtg |
309 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| | |||| |||||||| ||||||| |
|
|
| T |
8667067 |
gagtgaaggctgtaagaatgtccccaacttggtgctacgagatgtgacccctttgtcacttggtatttctgtaagtattgaacatatcatgagtgtggtg |
8666968 |
T |
|
| Q |
310 |
attcctaggaacacttccatccctgtcaaga |
340 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |
|
|
| T |
8666967 |
attcctagaaacacttccatacctgtcaaga |
8666937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 8659203 - 8658946
Alignment:
| Q |
18 |
tgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatcta |
117 |
Q |
| |
|
|||||| |||||||| || |||||||| ||| | | || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
8659203 |
tgttgagagttgtcttagcgattcaaaaatacagatgagtgatattgacgatattgttcttgtgggtggttcgtctaggattcccaaagtgcaagatcta |
8659104 |
T |
|
| Q |
118 |
ttgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
|||| ||| ||||| ||||| |||| || | |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||| |
|
|
| T |
8659103 |
ttgcaagaccttttcccaaagaaggttttatacaagagtatcaacccagatgaggctgttgcttatggtgcagctcttcaagctgctgttttaagcaaag |
8659004 |
T |
|
| Q |
218 |
gctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8659003 |
gctttaagaatgtcccaaacttggtgctgcaagatgttaccccattgtcacttggtat |
8658946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 1301299 - 1301044
Alignment:
| Q |
19 |
gttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctat |
118 |
Q |
| |
|
||||| |||||||| || |||||||| |||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
1301299 |
gttgagagttgtcttagcgattcaaaaatatgcatgagtgatatcgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaagatatat |
1301200 |
T |
|
| Q |
119 |
tgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaagg |
218 |
Q |
| |
|
||| ||| ||||| || ||| | |||| || | |||||||||| || |||||||||||||||||||||||| |||| ||||||||||| || |||| |
|
|
| T |
1301199 |
tgcaagacattttcccggagaaagttttatacaagagtatcaaccc-gacgaggctgttgcttatggtgcagctattcaagctgctattttaagcaaagg |
1301101 |
T |
|
| Q |
219 |
ctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
|| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
1301100 |
attcaagaatgtcccaaacttggtgctgcaagatgttaccccattgtcacttggtat |
1301044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 394 - 584
Target Start/End: Complemental strand, 8666880 - 8666690
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgct |
493 |
Q |
| |
|
||||||||||||||| |||||||| ||| |||||||| ||||||||||||| |||| ||| | || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
8666880 |
tatgagggtgagagaccaagagctgctgacaataatctgcttggttcatttgggcttcgttgtcttccaggtccccgtggccagcccttggaggtatgct |
8666781 |
T |
|
| Q |
494 |
tttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
8666780 |
tttcaattgatgaaaatggtatcctgactgttactgctagggaaatatccacaggcaatatgaacatgatcaccataaccaatgacaaaga |
8666690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 64 - 344
Target Start/End: Original strand, 29582215 - 29582492
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||||| || ||| | |||||||| ||||| |||||||||||||| | ||||||| ||||||||||||||||||||| || | |||| | ||||||| |
|
|
| T |
29582215 |
gatgatatcgtccttattggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgcatgagcatcaacc |
29582314 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| || ||||||| || | || | | | |||| |||| || || |
|
|
| T |
29582315 |
ctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgctgattgaaggcattgagaatgttccagattttatcttgcaagatattacaccctt |
29582414 |
T |
|
| Q |
264 |
gtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaagatgac |
344 |
Q |
| |
|
|||||||||||| | |||||| | |||||||||| |||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
29582415 |
gtcacttggtat---atcaacaaaaggagatatcatgagtgtggtgattcctaggaacactcccattcctgccaagatgac |
29582492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 8545364 - 8545216
Alignment:
| Q |
127 |
tttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaaga |
226 |
Q |
| |
|
||||| |||||||||||||||| || | | || ||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||| | ||||| |
|
|
| T |
8545364 |
ttttttaaggggaaggaattatgcaagagcattaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgctgagtgaagacaataaga |
8545265 |
T |
|
| Q |
227 |
atgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8545264 |
atgtcccaaacatggtgctacgagatgttacccctttgtcacttggtat |
8545216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 65 - 325
Target Start/End: Complemental strand, 6789305 - 6789048
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
||||| |||| ||||| ||||| || ||||| |||||||||||||| | ||||||| |||| |||||| ||| ||||| || | |||| | |||||||| |
|
|
| T |
6789305 |
atgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaaaggatttgtgcatgagcatcaaccc |
6789206 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattg |
264 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||| | ||||| ||||||| ||||| ||| || ||||||||||| | ||||||||| || ||| |
|
|
| T |
6789205 |
tgatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtgctgcaagatgttacaccgttg |
6789106 |
T |
|
| Q |
265 |
tcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacactt |
325 |
Q |
| |
|
|| ||||||| | ||||| | | | || ||||| ||||||||||||||||||||||| |
|
|
| T |
6789105 |
tctcttggtaaggcagtaata---ggaaatgtcatgagtgtggtgattcctaggaacactt |
6789048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 62 - 371
Target Start/End: Complemental strand, 17267735 - 17267429
Alignment:
| Q |
62 |
ttgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaattt-ttcaaggggaaggaattattcatgcgtatca |
160 |
Q |
| |
|
|||||||| |||| ||||| ||||| || ||||||||||| ||||||||| | ||||||| |||| || ||||||||||||||||||| || |||||| |
|
|
| T |
17267735 |
ttgatgatgttgtccttgttggtgggtcttctaggattccgaaagtgcagcaactattgc-agaacttcttcaaggggaaggaattatgcaaaagtatca |
17267637 |
T |
|
| Q |
161 |
acccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttacccc |
260 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||| | || |||| | || | |||||||| || ||||||||| | ||||| | || |
|
|
| T |
17267636 |
accctgatgaggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtgttgattgatgtcgcacc |
17267537 |
T |
|
| Q |
261 |
attgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaagatgactaaaatattttataca |
360 |
Q |
| |
|
| | || ||||||||||| ||| | || ||| ||||| |||||||||||||||||||||||| || ||||||||||| || |||| || | |||| |
|
|
| T |
17267536 |
actatctcttggtattgatttaatacat---gatgtcatgagtgtggtgattcctaggaacacttcaattcctgtcaagattacaaaaaaatatattaca |
17267440 |
T |
|
| Q |
361 |
gctggagataa |
371 |
Q |
| |
|
|||| |||||| |
|
|
| T |
17267439 |
gctgcagataa |
17267429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 64 - 326
Target Start/End: Complemental strand, 8590432 - 8590173
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| ||||| ||||| || ||||||||||||||||||||| | ||||||| ||| ||||| | ||||||||| | | || | ||||| | |
|
|
| T |
8590432 |
gatgatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggggaaggatctttacaatagcatcaatc |
8590333 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| | | |||| || |||||||||| || || |||||||||| ||||||||| ||||| |
|
|
| T |
8590332 |
cagatgaggctgttgcttatggtgcagctgttcaagctgctttgctttgtgatgggattaagaatgttcctaatttggtgctacaagatgttactccatt |
8590233 |
T |
|
| Q |
264 |
gtcacttggtattgaagt-aacaaatgaagatatcatggatgtggtgattcctaggaacacttc |
326 |
Q |
| |
|
||| |||||| | || || | |||| |||||||||||||| |||||||||| ||||||||| |
|
|
| T |
8590232 |
gtctcttggt----acgtcaatatatgatgatatcatggatgtagtgattcctaagaacacttc |
8590173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 200 - 337
Target Start/End: Original strand, 8671608 - 8671745
Alignment:
| Q |
200 |
ctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcat |
299 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | || | |||| ||||||| |
|
|
| T |
8671608 |
ctgctattttgagcaaaggctttaagaatgtccccaacttggtgctacgagatgttacgccattgtcacttggtattgctgcaaggattgaacatatcat |
8671707 |
T |
|
| Q |
300 |
ggatgtggtgattcctaggaacacttccatccctgtca |
337 |
Q |
| |
|
| |||||||||||| || ||||||||||| ||||||| |
|
|
| T |
8671708 |
gagtgtggtgattccaagaaacacttccatacctgtca |
8671745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 17260038 - 17259856
Alignment:
| Q |
61 |
attgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatca |
160 |
Q |
| |
|
||||||||| |||| ||||| ||||| || ||||||||||| ||||||||| | ||||||| || || |||||||| |||||||||| || | | |||| |
|
|
| T |
17260038 |
attgatgatgttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatca |
17259939 |
T |
|
| Q |
161 |
acccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtg |
243 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||| | || |||| | || | |||||||| || ||||||||| |
|
|
| T |
17259938 |
accctgatgaggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtg |
17259856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 64 - 273
Target Start/End: Complemental strand, 8581494 - 8581285
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| ||||| ||||| || ||||||||||| |||||| | ||||| | || |||||| ||||||||||||||| || | | ||||||| |
|
|
| T |
8581494 |
gatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggagtttttccaggggaaggaattatgcaagagcatcaacc |
8581395 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||||||||||||||||||||| ||| ||||||||||| | | ||||||||| |||||| ||| || |||||| | | ||||||||||| ||||| |
|
|
| T |
8581394 |
ctgatgaggctgttgcttatggtgctgctattcaggctgctttggttagtgaaggcattaagagtgttccaaacttgattttgcgagatgttacaccatt |
8581295 |
T |
|
| Q |
264 |
gtcacttggt |
273 |
Q |
| |
|
|||||||||| |
|
|
| T |
8581294 |
gtcacttggt |
8581285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 64 - 275
Target Start/End: Complemental strand, 8616475 - 8616261
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| || |||||| | |||||||| || | || | ||||| | |
|
|
| T |
8616475 |
gatgatattgttcttgtcggtggctcgtctaggattcctaaagtgcaggaactattgagtgactttttcgatgggaaggatttgtgcaagaacatcaatc |
8616376 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttg---agtgaaggctttaagaatgtcccgaacttggtgctacgagatgttacccc |
260 |
Q |
| |
|
| ||||||||||||||| ||| ||||| |||||||||||| | ||| | | || |||||||||||| || ||||||| ||| |||||||||||||| |
|
|
| T |
8616375 |
ctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgggtactacagactttaagaatgttccaaacttggcgctgcgagatgttacccc |
8616276 |
T |
|
| Q |
261 |
attgtcacttggtat |
275 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8616275 |
tctgtcacttggtat |
8616261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 8576056 - 8575918
Alignment:
| Q |
128 |
ttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaa |
227 |
Q |
| |
|
||||||||||||||||||||| | | | |||||||| ||||||||||||||||||||||| | ||| || |||||| | |||||||||||| |||||| |
|
|
| T |
8576056 |
ttttcaaggggaaggaattatgtaagagcatcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgctttgttgagtgaaggcagtaagaa |
8575957 |
T |
|
| Q |
228 |
tgtcccgaacttggtgctacgagatgttaccccattgtc |
266 |
Q |
| |
|
||| || ||||||||| ||||||||||||| || ||||| |
|
|
| T |
8575956 |
tgttccaaacttggtgttacgagatgttacaccgttgtc |
8575918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 27831203 - 27831428
Alignment:
| Q |
18 |
tgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatcta |
117 |
Q |
| |
|
|||||| |||||||||| || || ||||| |||||| | ||| |||||| |||| ||||| |||||||| || |||||||||||||||||| | ||| |
|
|
| T |
27831203 |
tgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgtccttgttggtggctcttcaaggattcccaaagtgcagcagcta |
27831302 |
T |
|
| Q |
118 |
ttgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
||| || ||||||||||| ||||| || | || | | ||||| || |||||||||||||||| |||||||||||| ||||||||| | |||||||| | |
|
|
| T |
27831303 |
ttggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatg |
27831402 |
T |
|
| Q |
218 |
gctttaagaatgtcccgaacttggtg |
243 |
Q |
| |
|
| ||| |||||| || ||||||||| |
|
|
| T |
27831403 |
acattatgaatgttccaaacttggtg |
27831428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 64 - 256
Target Start/End: Complemental strand, 8537830 - 8537638
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| || || |||||||| ||||||||||||||||||||| ||| ||| | | ||||||| ||||||||| | || | | ||||||| |
|
|
| T |
8537830 |
gatgatgttgtactagttggtggctcttctaggattcccaaagtgcagagtctgctgcaaaactttttcagggggaaggatatttttaaaagcatcaacc |
8537731 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgtta |
256 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||| ||||||||| | ||||| | |||| |||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
8537730 |
ctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcggaggcattaagactgttccgaacttggtgctgcgagatgtta |
8537638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 64 - 275
Target Start/End: Complemental strand, 8609711 - 8609500
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||||||||| || || || ||||||||||| |||||| || | ||| ||| ||| |||||||| || ||||| || | ||| | ||||||| |
|
|
| T |
8609711 |
gatgatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtgtatgagcatcaacc |
8609612 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| |||||||| |||||||||||||| ||||| ||||||||| | ||| |||||||| | || || || ||||||||||| ||||||||||| || || |
|
|
| T |
8609611 |
ctgatgaggcggttgcttatggtgctgctgtccaggctgctttgttgggtgaaggcatcaaatcagttccaaacttggtgctgcgagatgttacaccttt |
8609512 |
T |
|
| Q |
264 |
gtcacttggtat |
275 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8609511 |
gtcacttggtat |
8609500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 8586029 - 8586291
Alignment:
| Q |
13 |
aatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcagg |
112 |
Q |
| |
|
|||| |||||| |||||||| | ||||| |||||| | ||||||| | | || |||||||| ||||| ||||||||||| || ||||||||||| |||| |
|
|
| T |
8586029 |
aatactgttgagagttgtcttaccgattctaagatagagaagaatggtgtagacgatattgtccttgtcggtggctcgtccagaattcccaaagtacagg |
8586128 |
T |
|
| Q |
113 |
atctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
212 |
Q |
| |
|
| |||||| || || ||||| ||||| || |||| || | ||||| || ||||||||||||||| ||| || || ||||||||| || | || | |
|
|
| T |
8586129 |
aactattgagtgacttcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggctgcagttcaggcttctttgctgtg |
8586228 |
T |
|
| Q |
213 |
tgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
| ||| ||||||||| || || ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
8586229 |
taaagactttaagaaagttccaaacttggtgctgcgagatgttacccctctgtcacttggtat |
8586291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 29578047 - 29578257
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
|||| ||||| ||||| || || || ||||| ||||||||||||| | | ||||||| ||| ||||||||||| | ||| || | |||| | || ||||| |
|
|
| T |
29578047 |
atgaaattgtccttgttggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgcatgagcataaaccc |
29578146 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattg |
264 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||||| | |||| ||| ||| |||||||||| || || ||||| | |||||| |||| || ||| |
|
|
| T |
29578147 |
tgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggtcttgcgagatattacacccttg |
29578246 |
T |
|
| Q |
265 |
tcacttggtat |
275 |
Q |
| |
|
|| |||||||| |
|
|
| T |
29578247 |
tcgcttggtat |
29578257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 64 - 273
Target Start/End: Complemental strand, 8570105 - 8569896
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| ||||| ||||| || ||||||||||| |||||| | | ||||| | ||| |||||| ||||||||||||||| || | || |||| |
|
|
| T |
8570105 |
gatgatgttgtccttgttggtggttcttctaggattcctaaagtgaggcagctattacaagagtttttccaggggaaggaattatgcaacagcattaacc |
8570006 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||||||||||||||| ||||||||| ||||||||| | | |||||| || |||||| ||| || |||||||| | ||||||||||| ||||| |
|
|
| T |
8570005 |
ctgatgaggctgttgcttacggtgcagctattcaggctgttttgcatagtgaaagcgttaagagtgttccaaacttggttttgcgagatgttacaccatt |
8569906 |
T |
|
| Q |
264 |
gtcacttggt |
273 |
Q |
| |
|
|||||||||| |
|
|
| T |
8569905 |
gtcacttggt |
8569896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 272
Target Start/End: Original strand, 7878107 - 7878315
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| ||||| ||||| || |||||||||| |||||||||| | ||||||| || ||||| ||||||||||| | | || | ||||||| |
|
|
| T |
7878107 |
gatgatgttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaaggggaaggatatttgcagtagcatcaacc |
7878206 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||| | | |||| || |||||||||| || || |||||| | | ||||||||| ||||| |
|
|
| T |
7878207 |
cggatgaagctgttgcttatggtgcagctgttcaggctgctctgctttgtgatggtattaagaatgttcctaatttggtgttgcaagatgttactccatt |
7878306 |
T |
|
| Q |
264 |
gtcacttgg |
272 |
Q |
| |
|
||| ||||| |
|
|
| T |
7878307 |
gtctcttgg |
7878315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 3146965 - 3146841
Alignment:
| Q |
157 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgtta |
256 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| || |||||| | |||||||||| |||||| ||||| || ||||||||| | | ||||||| |
|
|
| T |
3146965 |
atcaaccctgatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggtggtgcaagatgttg |
3146866 |
T |
|
| Q |
257 |
ccccattgtcacttggtattgaagt |
281 |
Q |
| |
|
| || ||||| |||||||| ||||| |
|
|
| T |
3146865 |
ctcctttgtctcttggtatcgaagt |
3146841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 13333776 - 13333826
Alignment:
| Q |
10 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagaatgat |
60 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13333776 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagagtgat |
13333826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 8102460 - 8102311
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
||||| |||||||||| ||||| || |||||||||||||||| ||| | || |||| ||| || ||||| || ||||| ||| || | |||||||| |
|
|
| T |
8102460 |
atgatgttgttcttgttggtggttcaactaggattcccaaagttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccc |
8102361 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
214 |
Q |
| |
|
|| |||||||||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
8102360 |
cgacgaggctgttgcttatggtgccgctgttcaagctgctatcttgagtg |
8102311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 326
Target Start/End: Complemental strand, 8559065 - 8558918
Alignment:
| Q |
176 |
ttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
||||||||||||||||||| ||||||| | | | ||||||| | ||||||||| || ||| ||||||| ||||||||||||| ||||| |||||||| |
|
|
| T |
8559065 |
ttgcttatggtgcagctgtccaggctgttttgcttagtgaagacactaagaatgttccaaacatggtgctgagagatgttacccctttgtcccttggtat |
8558966 |
T |
|
| Q |
276 |
tgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttc |
326 |
Q |
| |
|
|||||| || | |||||| ||| |||||||||||||||||| ||||| |
|
|
| T |
8558965 |
tgaagtgac---cggagatattatgagtgtggtgattcctaggaatacttc |
8558918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 8646608 - 8646469
Alignment:
| Q |
127 |
tttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaaga |
226 |
Q |
| |
|
|||||||| | ||||||||||| | | | |||||||| |||| ||| ||||||||||| ||||| |||||||||||| | || |||| |||||||||| |
|
|
| T |
8646608 |
tttttcaatgagaaggaattatgcgagagcatcaaccctgatgtggccgttgcttatggcgcagccgttcaggctgctttattatgtgatggctttaaga |
8646509 |
T |
|
| Q |
227 |
atgtcccgaacttggtgctacgagatgttaccccattgtc |
266 |
Q |
| |
|
||| || ||||||||| | | |||||| ||||||||||| |
|
|
| T |
8646508 |
atgctccaaacttggtgtttcaagatgtcaccccattgtc |
8646469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 27846573 - 27846655
Alignment:
| Q |
157 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaactt |
239 |
Q |
| |
|
|||||||| |||||||||||||||| ||| |||||||| ||||||||| | |||||||| | | |||||||||| || ||||| |
|
|
| T |
27846573 |
atcaaccctgatgaggctgttgcttttggagcagctgtgcaggctgctttgttgagtgatgacattaagaatgttccaaactt |
27846655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 584
Target Start/End: Original strand, 8671894 - 8671966
Alignment:
| Q |
512 |
gcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||| ||||||||||| || || |||||||||||||| ||||||| |
|
|
| T |
8671894 |
gcatcctaactgttactgctagggaaatatccacaggcaatataaatgctatcaccattactaacaacaaaga |
8671966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 39985338 - 39985290
Alignment:
| Q |
166 |
gatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
214 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
39985338 |
gatgaggctgttgcatatggtgctgctgttcaggctgctatcttgagtg |
39985290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 8017878 - 8017937
Alignment:
| Q |
155 |
gtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| || || || |||||||||| |
|
|
| T |
8017878 |
gtatcaacccagacgaggctgttgcttatggtgccgctgtacaagcagcaattttgagtg |
8017937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 3146728 - 3146682
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttc |
440 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
3146728 |
tatgagggtgagagagcaagagctagtgacaacaatctgcttggttc |
3146682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 8586484 - 8586561
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatc |
542 |
Q |
| |
|
||||||||| || ||||| ||||||||||| |||| ||||||||||| ||||| |||||| |||| ||||| ||||| |
|
|
| T |
8586484 |
tcctcgtgggcatccctttgaggtatgcttcaccatcgatgaaaatggtatcctaactgtttctgcgaaggaaatatc |
8586561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 569
Target Start/End: Complemental strand, 8658753 - 8658649
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatc |
564 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| || ||||||||||||| | || ||| | |||||||| |||||| |||| ||||||||| |||| |
|
|
| T |
8658753 |
tcctcgtggcactcccttggaggtatgtttttcaatcaatgaaaatggcattttaacagtttcggctaaggaaatatcttcaggaaatatgaaccagatc |
8658654 |
T |
|
| Q |
565 |
accat |
569 |
Q |
| |
|
||||| |
|
|
| T |
8658653 |
accat |
8658649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 17259794 - 17259726
Alignment:
| Q |
303 |
tgtggtgattcctaggaacacttccatccctgtcaagatgactaaaatattttatacagctggagataa |
371 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| || |||| || | |||||||| |||||| |
|
|
| T |
17259794 |
tgtggtgattcctaggaacacttcaattcctgtcaagattacaaaaaaatatattacagctgcagataa |
17259726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 8586410 - 8586453
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttgg |
437 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
8586410 |
tatgagggtgagagagcaagagctagtgacaacaatctgcttgg |
8586453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 8646341 - 8646295
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttc |
440 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
8646341 |
tatgagggtgagagagcaagagcaagtgacaacaatctgcttggttc |
8646295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 1300848 - 1300760
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaata |
553 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| || ||||||||||||| | || ||| |||| ||||| ||||||||||| |||| |
|
|
| T |
1300848 |
tcctcgtggcacccccttggaggtatgtttttctataaatgaaaatggcattttaacagtttctgccaaggaaatatctacaggaaata |
1300760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 8569869 - 8569825
Alignment:
| Q |
303 |
tgtggtgattcctaggaacacttccatccctgtcaagatgactaa |
347 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||| | |||||| |
|
|
| T |
8569869 |
tgtggtgattccaaggaacacttccattcctgtcaaaaggactaa |
8569825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 10 - 340
Target Start/End: Original strand, 9336211 - 9336541
Alignment:
| Q |
10 |
atgaatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgc |
109 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9336211 |
atgaatattgttgacacctgtctcagggattcaaagatatacaagagtaatattgatgatattgttcttgtgggtggctcgtctaggattccgaaagtgc |
9336310 |
T |
|
| Q |
110 |
aggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctatttt |
209 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9336311 |
aagaactattgctagaatttttcaaggggaaggaattattcatgggtatcaacccagatgaggctgttgcttatggtgcagctgttcaagctgctatttt |
9336410 |
T |
|
| Q |
210 |
gagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtg |
309 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | | | || ||| |||||||| ||||||| |
|
|
| T |
9336411 |
gagtgaaggctttaagaatgcgcccaacttggtgctacgagatgttaccccattgtcacttggtatcgcaacatataaggaaaatatcatgagtgtggtg |
9336510 |
T |
|
| Q |
310 |
attcctaggaacacttccatccctgtcaaga |
340 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |
|
|
| T |
9336511 |
attcctagaaacacttccatacctgtcaaga |
9336541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 394 - 584
Target Start/End: Original strand, 9336598 - 9336788
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgct |
493 |
Q |
| |
|
||||||||||||||| ||||||||| ||| |||||||| |||||||||||| |||| || | || ||| ||| |||||||| |||||||||| |||| |
|
|
| T |
9336598 |
tatgagggtgagagaccaagagctactgacaataatctgcttggttcatttcggcttcattgtcttccagctccccgtggccatcccttggaggcctgct |
9336697 |
T |
|
| Q |
494 |
tttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9336698 |
tttcgattgatgaaaatggcatcctaactgttactgctagggaaatatctacaggcaatatgaacgcaatcaccattactaatgacaaaga |
9336788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 415
Target Start/End: Complemental strand, 30775092 - 30774695
Alignment:
| Q |
18 |
tgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatcta |
117 |
Q |
| |
|
|||||| |||||||| | ||||||||| || |||||| | | | ||||||||||||||||| ||||| || ||||||||||||||||||||||| ||| |
|
|
| T |
30775092 |
tgttgagagttgtcttactgattcaaaggtagacaagagtagtgtagatgatattgttcttgtcggtggttcttctaggattcccaaagtgcaggaacta |
30774993 |
T |
|
| Q |
118 |
ttgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
|||| | || ||||| |||||||| || | || | | ||||| || |||||||| |||||| | || |||||||| ||||||||| | |||||||||| |
|
|
| T |
30774992 |
ttgcgtaatttcttcaatgggaaggatttgtgcaagagcatcaatcctgatgaggcagttgctcacggggcagctgtccaggctgctctattgagtgaag |
30774893 |
T |
|
| Q |
218 |
gctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctag |
317 |
Q |
| |
|
|| ||||||||| ||| || |||||||| |||||||| ||||| ||||||||||||||| ||| ||| |||| | |||||||||||| |||||||| |
|
|
| T |
30774892 |
gcattaagaatgccccaaagttggtgctgcgagatgtcacccctttgtcacttggtatttcagt---gaatcaagacaccatggatgtggtaattcctag |
30774796 |
T |
|
| Q |
318 |
gaacacttccatccctgtcaagatgactaaaatattttatacagctggagata---attgtggtgtctcttttaacgtatatgagggtgagagagcaaga |
414 |
Q |
| |
|
||| ||||| | ||||| |||||||| ||| || | ||| ||| | |||| |||| |||||||| |||| || ||||||||||||||||||||| |
|
|
| T |
30774795 |
gaatacttctctacctgtgaagatgacaaaaggatatggtactgctagcgataaccattgccgtgtctctattaatgtttatgagggtgagagagcaaga |
30774696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 64 - 340
Target Start/End: Complemental strand, 35132250 - 35131977
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||||||||| || || || ||||||||||||||||||||| | ||||||| | | |||||||| |||||||| || | || | | || |||| |
|
|
| T |
35132250 |
gatgatgttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagagcattaacc |
35132151 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||||||||| |||||||| ||||| |||||||||||| | |||||| ||||| | || ||||| || || |||||| ||| |||||||| || || |
|
|
| T |
35132150 |
ccgatgaggctgtagcttatggggcagcagttcaggctgctttgttgagtaaaggcataaaaaatgttccaaagttggtgttacaggatgttacaccttt |
35132051 |
T |
|
| Q |
264 |
gtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaaga |
340 |
Q |
| |
|
||| ||||||| | || | | |||||||||| |||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
35132050 |
gtctcttggtaggtcaatagta---ggagatatcatgaatgtggtgattcctaggaacacttgcattcctgtcaaga |
35131977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 23596957 - 23597107
Alignment:
| Q |
62 |
ttgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaa |
161 |
Q |
| |
|
|||||||| |||||||||| || || ||| ||||||||||||| || || | || |||| ||| || ||||| ||||||||| | | | | | ||||| |
|
|
| T |
23596957 |
ttgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaa |
23597056 |
T |
|
| Q |
162 |
cccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
212 |
Q |
| |
|
||| |||||||||||||||||||| || || || || |||||||||||||| |
|
|
| T |
23597057 |
ccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
23597107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 23588200 - 23588257
Alignment:
| Q |
157 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtg |
214 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| ||||| || || |||||||||||||||| |
|
|
| T |
23588200 |
atcaaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
23588257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 54396126 - 54396069
Alignment:
| Q |
155 |
gtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
212 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||||||| |||||||| || || |||||||| |
|
|
| T |
54396126 |
gtattaaccctgatgaagctgttgcttatggtgctgctgttcaagcagcgattttgag |
54396069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 7e-69; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 59 - 275
Target Start/End: Original strand, 4678926 - 4679142
Alignment:
| Q |
59 |
atattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtat |
158 |
Q |
| |
|
||||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||| ||| ||||| ||| ||||||| || | || | |||| |
|
|
| T |
4678926 |
atattgatgatgttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtat |
4679025 |
T |
|
| Q |
159 |
caacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttacc |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
4679026 |
caacccagatgaggctgttgcttatggtgcagctatccaagctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttacc |
4679125 |
T |
|
| Q |
259 |
ccattgtcacttggtat |
275 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
4679126 |
ccattgtcacttggtat |
4679142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 391 - 584
Target Start/End: Complemental strand, 29465316 - 29465123
Alignment:
| Q |
391 |
gtatatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtat |
490 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| | | || | || || |||| |||||||||||||||||||||| |
|
|
| T |
29465316 |
gtatatgagggtgagagagcaagagctagtgacaattatctgcttggttcatttgggactccttgtcttccatgtccccgtggccagcccttggaggtat |
29465217 |
T |
|
| Q |
491 |
gcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
29465216 |
gcttttccattgatgaaaatggcatcctaactgttactgctaaggaaatatctactgacaatatgaatgtgatcaccattactaatggcaaaga |
29465123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 65 - 273
Target Start/End: Complemental strand, 15594827 - 15594619
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
|||||||||| |||| ||||| || |||||||||||||||||||| | |||||| || |||||| |||| |||||||| | |||| | |||||||| |
|
|
| T |
15594827 |
atgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagggaaaggaattgtgcatgagcatcaaccc |
15594728 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattg |
264 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||||| ||||| || ||||||||| ||| ||||||| | || ||| |
|
|
| T |
15594727 |
tgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaaggttttaaaaatgttccaaacttggtgatacaagatgttgcacctttg |
15594628 |
T |
|
| Q |
265 |
tcacttggt |
273 |
Q |
| |
|
|| |||||| |
|
|
| T |
15594627 |
tctcttggt |
15594619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 76 - 269
Target Start/End: Original strand, 34467174 - 34467367
Alignment:
| Q |
76 |
cttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctg |
175 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||| | ||||||| || |||||||| || ||||| ||| || | |||||||| |||||||||| |
|
|
| T |
34467174 |
cttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaatagcatcaaccctgatgaggctg |
34467273 |
T |
|
| Q |
176 |
ttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcact |
269 |
Q |
| |
|
| ||||||| |||||||| || |||||| | |||||| |||||||||| ||||| || ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
34467274 |
tcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtgctgcgagatgttacaccattgtcact |
34467367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 584
Target Start/End: Original strand, 4679329 - 4679448
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatc |
564 |
Q |
| |
|
|||||||||| |||||||||||||||||| | || |||| |||||||| ||| |||||| ||||||| || || |||||||| |||| |||| |||| |
|
|
| T |
4679329 |
tcctcgtggcacacccttggaggtatgctttgctatagatgcaaatggcaccctaactgtttctgctaaagaaatgtctacaggaaatacgaacaagatc |
4679428 |
T |
|
| Q |
565 |
accattactaatgacaaaga |
584 |
Q |
| |
|
||||| || ||||| ||||| |
|
|
| T |
4679429 |
accataaccaatgaaaaaga |
4679448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 52549422 - 52549537
Alignment:
| Q |
166 |
gatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgt |
265 |
Q |
| |
|
||||||| ||| |||||||| ||||||||||||||||| | |||||||||||| || ||||||| || || |||||||| | |||||||| || |||| |
|
|
| T |
52549422 |
gatgaggttgtagcttatggcgcagctgttcaggctgcattgttgagtgaaggcattcagaatgttccaaagttggtgctgcaggatgttacacctttgt |
52549521 |
T |
|
| Q |
266 |
cacttggtattgaagt |
281 |
Q |
| |
|
| |||| |||||||| |
|
|
| T |
52549522 |
ctcttgtcattgaagt |
52549537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 584
Target Start/End: Complemental strand, 15594499 - 15594309
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgct |
493 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| | |||||| || | ||| || ||| ||||| ||||||||| |||| || | ||||| |
|
|
| T |
15594499 |
tatgagggtgagagagcaagagctagtgacaataatttgcttggtatgttgactctttcttgcacttcgggtccccgtggccagacctttgaaggatgct |
15594400 |
T |
|
| Q |
494 |
tttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattactaatgacaaaga |
584 |
Q |
| |
|
|| | || |||||||||| |||||||||||| ||| ||||| | ||| || ||||||| |||| |||||| || || ||||||||||| |
|
|
| T |
15594399 |
ttgctatcgatgaaaatgctatcctgactgtttctgtgaaggaaacatccactggcaatacaaacgagatcacaataaccaatgacaaaga |
15594309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 131; Significance: 1e-67; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 57 - 275
Target Start/End: Original strand, 16657884 - 16658102
Alignment:
| Q |
57 |
tgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgt |
156 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||| || || |
|
|
| T |
16657884 |
tgatattgatgacgttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagt |
16657983 |
T |
|
| Q |
157 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgtta |
256 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| | ||||||||| |
|
|
| T |
16657984 |
atcaacccggatgaagctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgtta |
16658083 |
T |
|
| Q |
257 |
ccccattgtcacttggtat |
275 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
16658084 |
ccccattgtcgcttggtat |
16658102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 65 - 275
Target Start/End: Original strand, 16662367 - 16662577
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| | || ||||| |||||||| || | || | | |||||||| |
|
|
| T |
16662367 |
atgatattgttcttgtcgggggctcgtctaggattccaaaagtgcaggaattattgcgtaacttcttcaatgggaaggagttgtgcaagagcatcaaccc |
16662466 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattg |
264 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||||| | |||||||||||| ||||| |||| || ||||||||||| ||||| |||||||||||| |
|
|
| T |
16662467 |
tgatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtgctgcgagacgttaccccattg |
16662566 |
T |
|
| Q |
265 |
tcacttggtat |
275 |
Q |
| |
|
||||||||||| |
|
|
| T |
16662567 |
tcacttggtat |
16662577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 43625143 - 43624995
Alignment:
| Q |
127 |
tttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaaga |
226 |
Q |
| |
|
||||||||||||||||||| || | | || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| |
|
|
| T |
43625143 |
tttttcaaggggaaggaatcatgcgaaagcataaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaaga |
43625044 |
T |
|
| Q |
227 |
atgtcccgaacttggtgctacgagatgttaccccattgtcacttggtat |
275 |
Q |
| |
|
|||| || || |||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
43625043 |
atgttccaaaattggtgctgcgagatgttacccctttgtcacttggtat |
43624995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 338
Target Start/End: Complemental strand, 14703202 - 14702931
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||||||||| ||||| || ||| ||||||||||||| ||| | |||| | || |||||| |||||||||| || | || | || |||| |
|
|
| T |
14703202 |
gatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagcaattattacaggactttttccaggggaaggagttgtgcaacagcattaacc |
14703103 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||| ||||| |||||||| |||||||||||||||||| | |||||||||| | | |||||||| ||||| |||||||| | ||| |||| || || |
|
|
| T |
14703102 |
ctgatgaagctgtagcttatggggcagctgttcaggctgctttgttgagtgaagacgtcaagaatgttccgaagttggtgcttcaggatattacaccttt |
14703003 |
T |
|
| Q |
264 |
gtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaa |
338 |
Q |
| |
|
||| || |||| ||| | | | || |||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
14703002 |
gtctctaggtagggaatt---attcggaggtatcatggatgtggtgattcctaggaacacttgcattcctgtcaa |
14702931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 12245734 - 12245959
Alignment:
| Q |
18 |
tgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatcta |
117 |
Q |
| |
|
|||||| |||||| | | |||| ||||||| |||||| | ||| |||||| |||| ||||| ||||| || ||||||||||||||||| || | ||| |
|
|
| T |
12245734 |
tgttgagagttgtattatggatgcaaagatggacaagagtactatagatgattttgtacttgttggtggatcttctaggattcccaaagtccaacagcta |
12245833 |
T |
|
| Q |
118 |
ttgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
|| | || |||||||| ||||||||||| | || | | || ||||| || ||||||||||||||||| ||||||||||| |||||| | |||||| ||| |
|
|
| T |
12245834 |
ttacaggactttttcaacgggaaggaattgtgcaagagcattaaccctgacgaggctgttgcttatggggcagctgttcaagctgctttgttgagtaaag |
12245933 |
T |
|
| Q |
218 |
gctttaagaatgtcccgaacttggtg |
243 |
Q |
| |
|
|||||||||| || || |||||| |
|
|
| T |
12245934 |
atgttaagaatgttccaaatttggtg |
12245959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 338
Target Start/End: Complemental strand, 7541918 - 7541749
Alignment:
| Q |
166 |
gatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgt |
265 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| | ||||||| |||| ||||||| | || || |||||||| | |||||||| || |||| |
|
|
| T |
7541918 |
gatgaggctgttgcttatggggcagctgttcaggctgcattgttgagtggaggcgttaagaacgctccaaagttggtgctgcaggatgttacacctttgt |
7541819 |
T |
|
| Q |
266 |
cacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaa |
338 |
Q |
| |
|
| ||||| | | ||| | | | |||||| |||||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
7541818 |
ctcttggcaggggagtgata---ggagatataatggatgtggtgattcctcggaacacttgcattcctgtcaa |
7541749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 11999247 - 11998945
Alignment:
| Q |
18 |
tgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatcta |
117 |
Q |
| |
|
|||||| |||||| | | |||| ||||||| |||||| | ||| |||||| |||| ||||| ||||| || |||||||| |||||||| || | ||| |
|
|
| T |
11999247 |
tgttgagagttgtattatggatgcaaagatggacaagagtactatagatgatgttgtacttgttggtggatcttctaggat-cccaaagtccaacagcta |
11999149 |
T |
|
| Q |
118 |
ttgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
|| | || |||||||| |||||||| || | || | | || ||||| ||||||||||| |||||||| ||||||||||| |||||| | |||||||||| |
|
|
| T |
11999148 |
ttacatgactttttcaacgggaaggagttgtgcaagagcattaaccctgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtgaag |
11999049 |
T |
|
| Q |
218 |
gctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctag |
317 |
Q |
| |
|
|||||||||| || || |||||| | | |||||||| || ||||| ||||||| ||||||| | | | ||||||| ||||||||||||||| |
|
|
| T |
11999048 |
atgttaagaatgttccaaatttggtgttgcaggatgttactcctttgtctcttggta-ggaagtaaga---ggtggtatcatgagtgtggtgattcctag |
11998953 |
T |
|
| Q |
318 |
gaacactt |
325 |
Q |
| |
|
|||||||| |
|
|
| T |
11998952 |
gaacactt |
11998945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 12259179 - 12259228
Alignment:
| Q |
291 |
agatatcatggatgtggtgattcctaggaacacttccatccctgtcaaga |
340 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
12259179 |
agatatcatggatgtggtgattcctaggaacacttgcattcctgtcaaga |
12259228 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 12234456 - 12234349
Alignment:
| Q |
91 |
tctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggctgttgcttatggtgcag |
190 |
Q |
| |
|
||||||||||||||||||||| | ||||||| || ||||||||||||||||| | | || | |||| ||||| || ||||| |||||||||| |||| |
|
|
| T |
12234456 |
tctaggattcccaaagtgcagcaactattgcaggattttttcaaggggaaggagctgtgcaagagtattaaccctga-gaggcggttgcttatgaggcag |
12234358 |
T |
|
| Q |
191 |
ctgttcagg |
199 |
Q |
| |
|
||||||||| |
|
|
| T |
12234357 |
ctgttcagg |
12234349 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 12258955 - 12259108
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
|||||| |||| ||||| ||||| || |||||||||| |||||||||| | ||||| | || |||||||||||||| || || | || | | || || | |
|
|
| T |
12258955 |
gatgatgttgtccttgtaggtgggtcttctaggattctcaaagtgcagcagctattacaggattttttcaaggggaaagagttgtgcaagagcattaatc |
12259054 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaag |
217 |
Q |
| |
|
| ||||||||||| |||| ||| || ||| ||||||||||| | || ||||||| |
|
|
| T |
12259055 |
ctgatgaggctgtagcttttggggcggctattcaggctgctttgttaagtgaag |
12259108 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 584
Target Start/End: Original strand, 16658298 - 16658417
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatc |
564 |
Q |
| |
|
|||||| ||||| ||||| || ||||| ||| | | ||||||||||| ||||| |||||| |||||||||| |||||||||| |||| ||| |||| |
|
|
| T |
16658298 |
tcctcggggccaacccttagatgtatgttttgacctcgatgaaaatggtatcctaactgtttctgctaaggaagtatctacaggaaatacaaacaagatc |
16658397 |
T |
|
| Q |
565 |
accattactaatgacaaaga |
584 |
Q |
| |
|
||||| || ||||| ||||| |
|
|
| T |
16658398 |
accataaccaatgaaaaaga |
16658417 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 16662773 - 16662833
Alignment:
| Q |
465 |
tcctcgtggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgtt |
525 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| | || |||||||| |||||| | |||||| |
|
|
| T |
16662773 |
tcctcgtggccatcccttggatgtatgctttgctatcgatgaaaacggcatcttaactgtt |
16662833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 64 - 340
Target Start/End: Complemental strand, 12528298 - 12528025
Alignment:
| Q |
64 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
163 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||| || | ||||||| || ||||||||||| ||||| |||| || | | ||||||| |
|
|
| T |
12528298 |
gatgatattgtacttgttggtggctcgtctaggattcccaaagtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaacc |
12528199 |
T |
|
| Q |
164 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccatt |
263 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||| ||| ||||| || ||| | |||||||| || || |
|
|
| T |
12528198 |
ctgatgaggctgttgcttatggtgccgctgttcaggctgctttgttgagtgaaggcatgaagactgttccgaaagtgacgctgcaagatgttataccttt |
12528099 |
T |
|
| Q |
264 |
gtcacttggtattgaagtaacaaatgaagatatcatggatgtggtgattcctaggaacacttccatccctgtcaaga |
340 |
Q |
| |
|
||| |||||| || | ||| | |||| | |||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
12528098 |
gtctcttggtttt---tctataaaaggagatcttatggatgttatgattcctaggaacacttgcatccctgtcaaga |
12528025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 65 - 255
Target Start/End: Complemental strand, 43744609 - 43744419
Alignment:
| Q |
65 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
164 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||||||| ||||| || | ||||||| |||||||| |||||||| || | | | || ||||| |
|
|
| T |
43744609 |
atgatgttgttcttgttggtggctcctctaggattccaaaagtacaacaactattgcaggaattttttgcagggaaggatttgtgtaagaacattaaccc |
43744510 |
T |
|
| Q |
165 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgtt |
255 |
Q |
| |
|
|||||||| |||||| |||||||||||| ||||||||| | ||||||||||||||||| || || || ||| ||||||| | ||||||| |
|
|
| T |
43744509 |
tgatgaggcagttgctattggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccaaacgtggtgctgcaagatgtt |
43744419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 43744280 - 43744228
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgc |
446 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||||| |||||||| ||||| |
|
|
| T |
43744280 |
tatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttgc |
43744228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 28219616 - 28219501
Alignment:
| Q |
160 |
aacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccc |
259 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| || || ||||| |||||||| | ||||||||| | |
|
|
| T |
28219616 |
aaccctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccgaagttggtgctgcaagatgttacac |
28219517 |
T |
|
| Q |
260 |
cattgtcacttggtat |
275 |
Q |
| |
|
| ||||| |||||||| |
|
|
| T |
28219516 |
ctttgtctcttggtat |
28219501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 544
Target Start/End: Original strand, 53416763 - 53416913
Alignment:
| Q |
394 |
tatgagggtgagagagcaagagctagtgagaataatctacttggttcatttgcgcttggttatgtttcaggtcctcgtggccagcccttggaggtatgct |
493 |
Q |
| |
|
||||||||||||||| ||||||||| ||| |||||||| |||||||| | ||| || || ||||| |||| | |||||||| || ||||| | |
|
|
| T |
53416763 |
tatgagggtgagagaccaagagctactgacaataatctgcttggttctctcagcctttcctaccttccaggtgctcggcggcagcccttagatgtatgtt |
53416862 |
T |
|
| Q |
494 |
tttccattgatgaaaatggcatcctgactgttactgctaaggatatatcta |
544 |
Q |
| |
|
||||||| |||||||||| ||||| |||||| |||||||||| ||||||| |
|
|
| T |
53416863 |
tttccatcaatgaaaatggtatcctaactgtttctgctaaggaaatatcta |
53416913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 569
Target Start/End: Complemental strand, 53417591 - 53417494
Alignment:
| Q |
472 |
ggccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccat |
569 |
Q |
| |
|
|||||| |||| || ||||| |||||||| ||||||||||| ||||| || ||| |||||||||| ||| ||| | | |||| ||||| ||||||||| |
|
|
| T |
53417591 |
ggccagtccttagatgtatgtttttccatagatgaaaatggtatcctaaccgtttctgctaaggaaataactagaagaaataagaacgagatcaccat |
53417494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0248 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0248
Description:
Target: scaffold0248; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 584
Target Start/End: Original strand, 17433 - 17544
Alignment:
| Q |
473 |
gccagcccttggaggtatgcttttccattgatgaaaatggcatcctgactgttactgctaaggatatatctacaggcaatatgaacgcgatcaccattac |
572 |
Q |
| |
|
|||||||||| || |||| |||||||| ||||||||||| ||||| | |||| || ||||||| ||||||| | |||| ||||| ||| ||||| || |
|
|
| T |
17433 |
gccagcccttagatgtatctttttccatcgatgaaaatggtatcctaaatgtttctactaaggaaatatctagaataaataagaacgagatgaccataac |
17532 |
T |
|
| Q |
573 |
taatgacaaaga |
584 |
Q |
| |
|
||||||||||| |
|
|
| T |
17533 |
caatgacaaaga |
17544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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