View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21176_high_25 (Length: 214)
Name: NF21176_high_25
Description: NF21176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21176_high_25 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 37088578 - 37088365
Alignment:
| Q |
1 |
acataaatagttgcaagatacaattctagatgccatagaagagtcagaaaaaatcagatatgattctccattataccaaaagaatactatacaatacaat |
100 |
Q |
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| T |
37088578 |
acataaatagttgcaagatacaattctagatgccatagaagagtcagaaaaaatcagatatgattctccattataccaaaagaatactatacaatacaat |
37088479 |
T |
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| Q |
101 |
tcaaaagactgacagggattgctaactagaccaaaattgacacacttatgtacaagtgaccaaagcaagacagaatatttgtggagcatcttttaagata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37088478 |
tcaaaagactgacagggattgctaactagaccaaaattgacacacttatgcacaagtgaccaaagcaagacagaatatttgtggagcatcttttaagata |
37088379 |
T |
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| Q |
201 |
tttttgatagattg |
214 |
Q |
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|||||||||||||| |
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| T |
37088378 |
tttttgatagattg |
37088365 |
T |
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