View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21176_low_22 (Length: 247)

Name: NF21176_low_22
Description: NF21176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21176_low_22
NF21176_low_22
[»] chr7 (27 HSPs)
chr7 (7-90)||(35923307-35923391)
chr7 (1-88)||(6191094-6191183)
chr7 (13-88)||(20123702-20123779)
chr7 (7-90)||(25737647-25737732)
chr7 (7-90)||(45486010-45486095)
chr7 (7-88)||(25944631-25944714)
chr7 (7-88)||(46760279-46760362)
chr7 (7-88)||(14805925-14806007)
chr7 (7-88)||(15252919-15253001)
chr7 (7-88)||(19912791-19912874)
chr7 (13-88)||(4910657-4910732)
chr7 (7-88)||(18102585-18102668)
chr7 (1-74)||(35068886-35068960)
chr7 (13-88)||(12632366-12632443)
chr7 (23-74)||(47779676-47779727)
chr7 (7-88)||(11780073-11780155)
chr7 (1-88)||(44682926-44683015)
chr7 (7-74)||(22632144-22632212)
chr7 (27-74)||(31549940-31549987)
chr7 (23-74)||(31768999-31769050)
chr7 (23-74)||(35888006-35888057)
chr7 (23-73)||(16917543-16917593)
chr7 (23-56)||(10248600-10248633)
chr7 (24-88)||(14574637-14574702)
chr7 (23-55)||(24151638-24151670)
chr7 (1-56)||(38260365-38260421)
chr7 (13-87)||(47557622-47557700)
[»] scaffold0774 (1 HSPs)
scaffold0774 (7-88)||(3451-3534)
[»] chr6 (14 HSPs)
chr6 (7-88)||(21542473-21542556)
chr6 (13-90)||(3095741-3095819)
chr6 (7-88)||(11082268-11082351)
chr6 (1-88)||(12461452-12461541)
chr6 (7-88)||(35129077-35129161)
chr6 (7-74)||(7274913-7274981)
chr6 (23-74)||(16524449-16524500)
chr6 (7-88)||(34177664-34177747)
chr6 (13-74)||(30794230-30794292)
chr6 (23-71)||(5822075-5822123)
chr6 (23-74)||(4032057-4032108)
chr6 (23-74)||(4988013-4988064)
chr6 (23-74)||(16013470-16013521)
chr6 (23-88)||(14573151-14573216)
[»] chr5 (32 HSPs)
chr5 (7-88)||(43589985-43590068)
chr5 (1-88)||(42273696-42273785)
chr5 (7-88)||(20644069-20644152)
chr5 (5-88)||(5984131-5984216)
chr5 (13-88)||(37522612-37522689)
chr5 (7-88)||(6686439-6686523)
chr5 (7-88)||(11261907-11261990)
chr5 (7-74)||(39505271-39505339)
chr5 (23-88)||(37562784-37562851)
chr5 (13-88)||(34425391-34425468)
chr5 (7-74)||(19413196-19413264)
chr5 (23-90)||(25840936-25841004)
chr5 (7-74)||(38130154-38130222)
chr5 (23-78)||(3463849-3463904)
chr5 (23-74)||(8959712-8959763)
chr5 (23-74)||(12912332-12912383)
chr5 (13-90)||(17351449-17351528)
chr5 (7-88)||(20039157-20039240)
chr5 (7-88)||(32111057-32111140)
chr5 (1-74)||(5369069-5369143)
chr5 (18-74)||(16153384-16153440)
chr5 (13-88)||(42104273-42104348)
chr5 (1-55)||(10153985-10154040)
chr5 (7-88)||(30893273-30893356)
chr5 (23-74)||(43454361-43454412)
chr5 (7-88)||(8225516-8225600)
chr5 (23-56)||(8506503-8506536)
chr5 (59-88)||(9957458-9957487)
chr5 (25-74)||(13146801-13146850)
chr5 (7-70)||(4463415-4463479)
chr5 (1-56)||(6391918-6391974)
chr5 (30-74)||(41625549-41625593)
[»] chr4 (39 HSPs)
chr4 (7-88)||(2229300-2229383)
chr4 (7-88)||(20281644-20281727)
chr4 (7-88)||(47867932-47868015)
chr4 (4-88)||(39078207-39078292)
chr4 (13-90)||(7654676-7654755)
chr4 (7-88)||(4058768-4058851)
chr4 (7-88)||(26916378-26916461)
chr4 (7-88)||(55580723-55580806)
chr4 (1-78)||(46070549-46070627)
chr4 (13-84)||(41414631-41414704)
chr4 (7-74)||(14332813-14332881)
chr4 (7-74)||(35310773-35310841)
chr4 (1-90)||(5483292-5483383)
chr4 (7-88)||(16604862-16604945)
chr4 (7-88)||(20716233-20716316)
chr4 (23-88)||(24940435-24940501)
chr4 (13-88)||(17794557-17794634)
chr4 (7-74)||(42915583-42915651)
chr4 (7-74)||(56318101-56318169)
chr4 (7-88)||(10069750-10069833)
chr4 (23-74)||(29511495-29511546)
chr4 (7-73)||(48793660-48793727)
chr4 (1-70)||(8178274-8178344)
chr4 (1-74)||(47516222-47516296)
chr4 (33-88)||(16473828-16473884)
chr4 (7-74)||(28669032-28669100)
chr4 (23-90)||(32323276-32323344)
chr4 (23-74)||(5064686-5064737)
chr4 (23-81)||(21722705-21722764)
chr4 (23-74)||(28142653-28142704)
chr4 (7-88)||(29203559-29203642)
chr4 (23-74)||(32410398-32410449)
chr4 (23-74)||(37911954-37912005)
chr4 (23-74)||(49080327-49080378)
chr4 (13-86)||(1585367-1585440)
chr4 (1-57)||(17799182-17799239)
chr4 (44-88)||(31280280-31280325)
chr4 (13-65)||(50145795-50145848)
chr4 (7-74)||(8683337-8683405)
[»] chr2 (37 HSPs)
chr2 (1-88)||(45660414-45660503)
chr2 (7-88)||(6110221-6110304)
chr2 (7-74)||(3201381-3201449)
chr2 (7-74)||(19264155-19264223)
chr2 (7-88)||(11617079-11617162)
chr2 (1-86)||(14874012-14874099)
chr2 (7-88)||(24204551-24204634)
chr2 (7-88)||(28599170-28599253)
chr2 (7-88)||(35517178-35517261)
chr2 (23-88)||(35115825-35115892)
chr2 (5-74)||(28858362-28858432)
chr2 (1-74)||(33198668-33198742)
chr2 (23-73)||(40584436-40584486)
chr2 (23-88)||(45085329-45085395)
chr2 (7-90)||(6765953-6766038)
chr2 (7-90)||(8701657-8701742)
chr2 (13-88)||(12938303-12938380)
chr2 (23-88)||(9864740-9864807)
chr2 (7-74)||(25572100-25572168)
chr2 (7-74)||(29524078-29524146)
chr2 (23-74)||(4891676-4891727)
chr2 (23-74)||(26998389-26998440)
chr2 (1-90)||(33677532-33677623)
chr2 (7-88)||(41528311-41528394)
chr2 (23-74)||(43415473-43415524)
chr2 (7-74)||(5963256-5963323)
chr2 (23-74)||(32010174-32010225)
chr2 (23-74)||(32273743-32273794)
chr2 (23-74)||(38071067-38071118)
chr2 (23-74)||(40808757-40808807)
chr2 (13-71)||(28678688-28678746)
chr2 (23-88)||(35022971-35023036)
chr2 (23-87)||(4707493-4707558)
chr2 (13-88)||(7645249-7645326)
chr2 (23-56)||(16494981-16495014)
chr2 (48-88)||(44455086-44455127)
chr2 (13-56)||(16179642-16179686)
[»] chr1 (49 HSPs)
chr1 (7-85)||(6785511-6785591)
chr1 (7-88)||(2126093-2126176)
chr1 (7-88)||(11241082-11241165)
chr1 (7-88)||(39555609-39555692)
chr1 (7-90)||(43765349-43765435)
chr1 (7-88)||(6786893-6786976)
chr1 (7-88)||(12448990-12449073)
chr1 (7-88)||(15959663-15959746)
chr1 (7-88)||(24190524-24190607)
chr1 (7-90)||(33369606-33369690)
chr1 (13-88)||(39932595-39932672)
chr1 (13-88)||(52984994-52985071)
chr1 (13-90)||(2246035-2246114)
chr1 (14-88)||(3875042-3875116)
chr1 (7-88)||(28016769-28016852)
chr1 (7-88)||(32624028-32624111)
chr1 (7-88)||(35691448-35691531)
chr1 (13-74)||(3861733-3861795)
chr1 (13-85)||(10558785-10558856)
chr1 (7-90)||(42965837-42965921)
chr1 (1-56)||(5858427-5858483)
chr1 (7-74)||(44148874-44148942)
chr1 (23-74)||(24728665-24728716)
chr1 (13-90)||(40718739-40718818)
chr1 (13-74)||(7468001-7468063)
chr1 (1-74)||(30221774-30221848)
chr1 (1-74)||(33431608-33431682)
chr1 (7-74)||(3076350-3076418)
chr1 (1-56)||(16688185-16688241)
chr1 (23-90)||(32983193-32983260)
chr1 (7-74)||(43667341-43667409)
chr1 (23-74)||(7397778-7397829)
chr1 (7-88)||(45226193-45226276)
chr1 (24-90)||(46543055-46543122)
chr1 (23-74)||(50176594-50176645)
chr1 (7-53)||(50370016-50370063)
chr1 (23-73)||(1034929-1034979)
chr1 (1-74)||(25391731-25391804)
chr1 (13-74)||(37735421-37735483)
chr1 (1-50)||(41063790-41063840)
chr1 (1-74)||(46818540-46818614)
chr1 (23-56)||(5950511-5950544)
chr1 (23-56)||(8889753-8889786)
chr1 (23-56)||(15912270-15912303)
chr1 (13-84)||(28120782-28120855)
chr1 (1-61)||(32318611-32318672)
chr1 (4-56)||(35366259-35366312)
chr1 (13-53)||(47600098-47600139)
chr1 (7-74)||(47014529-47014597)
[»] chr8 (32 HSPs)
chr8 (7-88)||(34890198-34890281)
chr8 (7-88)||(36190825-36190908)
chr8 (23-88)||(43216371-43216437)
chr8 (7-90)||(7022425-7022510)
chr8 (13-88)||(31734174-31734251)
chr8 (7-88)||(28348663-28348746)
chr8 (23-88)||(7858598-7858664)
chr8 (7-87)||(8711930-8712011)
chr8 (13-88)||(26483591-26483668)
chr8 (13-88)||(35456049-35456125)
chr8 (23-90)||(4480845-4480913)
chr8 (25-88)||(15824661-15824725)
chr8 (23-88)||(13143969-13144036)
chr8 (13-90)||(41086408-41086487)
chr8 (23-74)||(41362346-41362397)
chr8 (13-74)||(29920307-29920369)
chr8 (7-88)||(35525640-35525721)
chr8 (13-88)||(44663816-44663890)
chr8 (7-85)||(15957938-15958018)
chr8 (1-56)||(26954449-26954505)
chr8 (7-84)||(34158318-34158398)
chr8 (23-78)||(4038916-4038971)
chr8 (7-57)||(8712577-8712628)
chr8 (7-41)||(3642042-3642076)
chr8 (7-90)||(30575856-30575942)
chr8 (7-88)||(8107641-8107725)
chr8 (1-88)||(8709810-8709899)
chr8 (23-56)||(8745653-8745686)
chr8 (4-56)||(17713273-17713326)
chr8 (1-56)||(2628221-2628277)
chr8 (1-56)||(5217439-5217495)
chr8 (23-90)||(16358134-16358201)
[»] chr3 (50 HSPs)
chr3 (7-88)||(30189630-30189713)
chr3 (13-90)||(37042397-37042476)
chr3 (1-88)||(6438136-6438225)
chr3 (7-90)||(23311573-23311658)
chr3 (1-88)||(28875459-28875548)
chr3 (1-56)||(30454740-30454795)
chr3 (5-88)||(9264608-9264693)
chr3 (23-88)||(20847251-20847316)
chr3 (1-88)||(32619812-32619901)
chr3 (1-88)||(35963205-35963294)
chr3 (15-90)||(41476316-41476393)
chr3 (7-88)||(11054293-11054377)
chr3 (7-74)||(37075019-37075087)
chr3 (13-88)||(8703173-8703247)
chr3 (13-88)||(9055060-9055134)
chr3 (7-88)||(23910495-23910578)
chr3 (7-88)||(46711640-46711723)
chr3 (1-74)||(50651034-50651108)
chr3 (7-90)||(36546601-36546686)
chr3 (7-90)||(36561629-36561714)
chr3 (7-74)||(579135-579203)
chr3 (7-74)||(2927348-2927416)
chr3 (1-56)||(34194935-34194991)
chr3 (23-74)||(3972351-3972401)
chr3 (23-74)||(3997477-3997527)
chr3 (7-88)||(14752190-14752273)
chr3 (1-74)||(6752723-6752797)
chr3 (12-88)||(26208078-26208156)
chr3 (23-88)||(47864267-47864333)
chr3 (4-56)||(16033002-16033055)
chr3 (30-88)||(50730191-50730251)
chr3 (30-88)||(50782603-50782663)
chr3 (1-56)||(7886632-7886688)
chr3 (1-56)||(46918228-46918284)
chr3 (7-88)||(6075140-6075223)
chr3 (23-74)||(10114981-10115032)
chr3 (23-74)||(21214311-21214362)
chr3 (23-74)||(22479051-22479102)
chr3 (23-74)||(25242175-25242226)
chr3 (23-74)||(26724988-26725039)
chr3 (7-88)||(29235246-29235329)
chr3 (23-85)||(31836995-31837058)
chr3 (23-74)||(46557167-46557218)
chr3 (7-88)||(53270294-53270377)
chr3 (23-90)||(33973546-33973615)
chr3 (23-56)||(10014339-10014372)
chr3 (23-56)||(10252081-10252114)
chr3 (1-56)||(8097033-8097089)
chr3 (7-54)||(34722622-34722670)
chr3 (22-74)||(41936195-41936247)
[»] scaffold0300 (1 HSPs)
scaffold0300 (7-88)||(596-679)
[»] scaffold0111 (1 HSPs)
scaffold0111 (7-82)||(40234-40311)
[»] scaffold0442 (1 HSPs)
scaffold0442 (7-74)||(10100-10168)
[»] scaffold0132 (2 HSPs)
scaffold0132 (23-90)||(1084-1152)
scaffold0132 (23-90)||(9044-9112)
[»] scaffold0018 (1 HSPs)
scaffold0018 (7-79)||(154916-154989)
[»] scaffold0062 (1 HSPs)
scaffold0062 (7-88)||(44794-44877)
[»] scaffold0045 (1 HSPs)
scaffold0045 (7-88)||(78012-78095)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-56)||(160975-161031)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-74)||(157849-157917)
[»] scaffold1786 (1 HSPs)
scaffold1786 (1-67)||(896-963)
[»] scaffold0565 (1 HSPs)
scaffold0565 (23-74)||(5913-5964)
[»] scaffold0330 (1 HSPs)
scaffold0330 (24-74)||(3241-3291)


Alignment Details
Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35923307 - 35923391
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  35923307 ataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaactatactccaaatttt 35923391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6191094 - 6191183
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||    
T  6191094 ttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttaaaagaaaacacaaaaaactatactccaaatt 6191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 20123779 - 20123702
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||    
T  20123779 aatagccaatgaaaattgtttttacatcttgctataaaactttttccaaagaatacacaaaaaactatactccaaatt 20123702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 25737732 - 25737647
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| |||||||||| |||||||||    
T  25737732 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactataccccaaatttt 25737647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 45486010 - 45486095
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  45486010 ataaccaatagccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatttt 45486095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 25944631 - 25944714
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaac-tatactccaaatt 88  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25944631 ataaccaatggccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaacttatactccaaatt 25944714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 46760362 - 46760279
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||    
T  46760362 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 46760279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 14805925 - 14806007
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||| || |||||||||||||||||||    
T  14805925 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc-aaagaaaatacaaaaaactatactccaaatt 14806007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 15252919 - 15253001
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||| || |||||||||||||||||||    
T  15252919 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc-aaagaaaatacaaaaaactatactccaaatt 15253001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 19912874 - 19912791
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||| ||||| |||||||||||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  19912874 ataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactatactccaaatt 19912791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 4910732 - 4910657
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||||||| |||||| |||||||||||| ||||||||||| ||| |||||||||||||||| |||||| ||||||    
T  4910732 aatagccaatgaaaattatttttacatcttcctataaaactttttctaaagaaaacacaaaaa-tatacttcaaatt 4910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 18102585 - 18102668
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  18102585 ataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 18102668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35068960 - 35068886
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||||| ||| ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  35068960 ttctctataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaa 35068886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 12632443 - 12632366
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| |||| |||||| ||  ||||||||||  |||||||||||||||||||    
T  12632443 aatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactccaaatt 12632366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 47779676 - 47779727
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  47779676 aaaattgtttttacatcttcccatgaaacttattctaaagaaaacacaaaaa 47779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11780073 - 11780155
Alignment:
Q  7 ataacaaatagccaataaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||| |||||| |||| ||||| |||||||||||| | |||||| |||||  ||||||||||| |||||||||| ||||||||    
T  11780073 ataagaaatagtcaatgaaattatttttacatcttccaataaaatttattttaaagaaaacacgaaaaactatattccaaatt 11780155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44682926 - 44683015
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||   || |||||||||| ||| ||||||||||| | |||||||||||||    
T  44682926 ttctccataaccaatagtcaatgaaaattgtttttacatcttcgcatcaaacttattccaaaaaaaacacaaaatattatactccaaatt 44683015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 22632144 - 22632212
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||| ||||| ||||||||||||||||||| | || |||||||||  ||||||||||||||||    
T  22632144 ataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttatttcaaagaaaacacaaaaa 22632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 31549987 - 31549940
Alignment:
Q  27 ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||| |||||||| |||||| ||||||||| ||||||    
T  31549987 ttgtttttacatcttcctataaaatttattctaaagaaaacgcaaaaa 31549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 31769050 - 31768999
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  |||||  |||||||||    
T  31769050 aaaattgtttttacatcttcctataaaacttatttcaaagatgacacaaaaa 31768999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 35888057 - 35888006
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| |||||||| |||||  ||||| ||||||||||    
T  35888057 aaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaa 35888006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 16917543 - 16917593
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa 73  Q
    ||||||||||||||||||| | || |||||||||| |||||||| ||||||    
T  16917543 aaaattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaa 16917593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 10248600 - 10248633
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  10248600 aaaattgtttttacatctttctataaaacttatt 10248633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 14574637 - 14574702
Alignment:
Q  24 aaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||| | || |||||||||   |||||||||| |||||||||||||||||||    
T  14574637 aaattatttttacatcttcccatgaaacttattatcaagaaaacacaaaaaactatactccaaatt 14574702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 24151670 - 24151638
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttat 55  Q
    ||||||||||||||||||| |||||||||||||    
T  24151670 aaaattgtttttacatcttcctataaaacttat 24151638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38260365 - 38260421
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    |||||||||| ||||| ||||| |||||| |||||||| ||| ||||||||||||||    
T  38260365 ttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 47557700 - 47557622
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac---aaaaactatactccaaat 87  Q
    |||||||||| ||||||||||||||||||| |||||||  || || |||| |||| ||   ||||||||||||||||||    
T  47557700 aatagccaatgaaaattgtttttacatcttcctataaattttttttaaaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 3534 - 3451
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  3534 ataaccaatagccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactatactccaaatt 3451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 21542473 - 21542556
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  21542473 ataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 21542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 3095819 - 3095741
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  3095819 aatagccaatgaaaattgtttttacatcttcctataaaactt-ttccaaagaaaacacaaaaaactatactccaaatttt 3095741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 11082351 - 11082268
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  11082351 ataaccaatagccaatgaaaattgtttttacatctccctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 11082268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12461541 - 12461452
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctat-aaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    ||||| ||||| |||||||||| ||||||||||||||||||| |||| ||||||||||  |||||||| | |||||||||| ||||||||    
T  12461541 ttctccataaccaatagccaatgaaaattgtttttacatctttctataaaaacttatttcaaagaaaataaaaaaactatattccaaatt 12461452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 35129161 - 35129077
Alignment:
Q  7 ataacaaatagccaat-aaaattgttt-ttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||| ||||| |||||||||| ||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  35129161 ataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 35129077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 7274981 - 7274913
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| ||||||||||||||||||| | || |||||||||| |||||||| |||||||    
T  7274981 ataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaatacaaaaa 7274913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 16524449 - 16524500
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  16524449 aaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 16524500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 34177747 - 34177664
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||  |||||||  || ||| |||||||||||| ||||||||| ||||||||    
T  34177747 ataaccaatagccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaaactatattccaaatt 34177664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 30794292 - 30794230
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||| ||| |||||| |||||    
T  30794292 aatagccaatgaaaaatgtttttacatcttcctataaaacttattccaaataaaacataaaaa 30794230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 5822123 - 5822075
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaa 71  Q
    ||||||||||||||||||| |||| |||||||||| ||||| |||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaa 5822075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 4032057 - 4032108
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | ||||||||||||  ||||| ||||||||||    
T  4032057 aaaattgtttttacatcttccgataaaacttatttcaaagataacacaaaaa 4032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 4988013 - 4988064
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||| |||||||||||| ||||||||||||||  ||||| ||||||||||    
T  4988013 aaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 4988064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 16013521 - 16013470
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| || |||||||    
T  16013521 aaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaa 16013470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 14573216 - 14573151
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||| |||||||||| | | |||| |||||||  |||||||| ||||||| |||||||||||||    
T  14573216 aaaattatttttacatcatcccataatacttatttcaaagaaaatacaaaaattatactccaaatt 14573151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 43590068 - 43589985
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  43590068 ataaccaatagccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaaactatactccaaatt 43589985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42273696 - 42273785
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||||||||| |||||||||||||||||||  |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  42273696 ttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaaaaactatactccaaatt 42273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20644069 - 20644152
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||| |||||||||||||    
T  20644069 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattatactccaaatt 20644152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 5984216 - 5984131
Alignment:
Q  5 caataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||||| ||||| |||| |||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||| |||||    
T  5984216 caataaccaatagtcaatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaaactatactctaaatt 5984131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 37522689 - 37522612
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||| ||| |||||||| ||||||||||||||||||    
T  37522689 aatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaatt 37522612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6686439 - 6686523
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaac-ttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| || ||| ||||||||||| |||||||||||||||||||    
T  6686439 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaatt 6686523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 11261990 - 11261907
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| |||| |||||||||||||    
T  11261990 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 11261907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 39505339 - 39505271
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  39505339 ataacgaattgccaatgaaaattgtttttacatcttaccataaaacttattccaaagaaaacacaaaaa 39505271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 37562851 - 37562784
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt-caaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||||| |||||||||||||||||||    
T  37562851 aaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaatt 37562784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 34425391 - 34425468
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| |||||||||||||||| || ||||||||||| ||  ||||||||||| |||||||||||| ||||||    
T  34425391 aatagccaatgaaaattgtttttacatattcctataaaacttttttcaaagaaaacacaaaaaactatacttcaaatt 34425468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 19413196 - 19413264
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  19413196 ataaccaattgccaatgaaaattgtttttacatcttcccataaaacttatttcaaagaaaacacaaaaa 19413264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 25840936 - 25841004
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||| ||||||||| || ||||||||    
T  25840936 aaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaatttt 25841004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 38130222 - 38130154
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| |||||| ||||||||| || ||||||||||| ||| ||||||||||||||||    
T  38130222 ataaccaatagccaatgaaaattatttttacatattcctataaaactttttctaaagaaaacacaaaaa 38130154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 3463904 - 3463849
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactat 78  Q
    ||||||||||||| ||||| ||||||||||||||  ||||| ||||||||||||||    
T  3463904 aaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaactat 3463849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 8959712 - 8959763
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  8959712 aaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 8959763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 12912383 - 12912332
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  12912383 aaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 12912332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 17351449 - 17351528
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaa-cacaaaaactatactccaaatttt 90  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| || |||||  | |||||||||||||||| ||||    
T  17351449 aatagccaattaaaattgtttttacatctttccataaaacttattccaacgaaaataaaaaaaactatactccaagtttt 17351528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20039157 - 20039240
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||||| ||| ||||||||||| ||||||||| | ||  ||||||||||| ||||| |||||||||||||    
T  20039157 ataaccaatagccaataaaaattggttttacatcttcctataaaacctttttcaaagaaaacacaaaaaattatactccaaatt 20039240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 32111057 - 32111140
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    ||||| ||||| |||| ||||||||||||||||||| |||| |||||| ||  ||||||||||||||| | |||||||||||||    
T  32111057 ataaccaatagtcaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacacaaaacattatactccaaatt 32111140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5369143 - 5369069
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||| || | ||||| ||||||||||||||||||| ||||||||||||||  ||| | ||||||||||    
T  5369143 ttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaa 5369069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 16153440 - 16153384
Alignment:
Q  18 ccaataaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  16153440 ccaatgaaaatgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 16153384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 42104348 - 42104273
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| | || |||||| ||| ||||| ||||| |||| |||||||||||||    
T  42104348 aatagccaatgaaaattgtttttacatcttcccatgaaacttgttccaaagagaacac-aaaattatactccaaatt 42104273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10154040 - 10153985
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttat 55  Q
    |||||||| || |||| ||||| ||||||||||||||||||| |||||||||||||    
T  10154040 ttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaacttat 10153985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 30893356 - 30893273
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaa-aaactatactccaaatt 88  Q
    |||||||||| ||||||||| || |||||||||||| | |||||| | |||| ||  ||||||||| |||||||||||||||||    
T  30893356 ataacaaataaccaataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaatt 30893273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 43454412 - 43454361
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||||||| || |||||||||||||   ||||||||||||||||    
T  43454412 aaaattgtttttacatattcctataaaacttatgacaaagaaaacacaaaaa 43454361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 8225516 - 8225600
Alignment:
Q  7 ataacaaatagccaataaaattgttttt--acatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||| |||||  |||| || ||||||||||| ||| |||||||| || |||||||||| ||||||||    
T  8225516 ataaccaatagccaatgaaattttttttttacattttcctataaaactttttccaaagaaaatacaaaaaactatagtccaaatt 8225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8506503 - 8506536
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  8506503 aaaattgtttttacatctttctataaaacttatt 8506536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 9957487 - 9957458
Alignment:
Q  59 aaagaaaacacaaaaactatactccaaatt 88  Q
    ||||||||||||||||||||||||||||||    
T  9957487 aaagaaaacacaaaaactatactccaaatt 9957458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 13146801 - 13146850
Alignment:
Q  25 aattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||| |||||||||||| | ||||||||||||| ||||| ||||||||||    
T  13146801 aattatttttacatctttccataaaacttattccaaagagaacacaaaaa 13146850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 4463415 - 4463479
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca 70  Q
    ||||| |||||||| | ||||||||||||||||||| | || || ||||||| ||||||||||||    
T  4463415 ataaccaatagccagtgaaaattgtttttacatcttcccatgaagcttattccaaagaaaacaca 4463479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6391918 - 6391974
Alignment:
Q  1 ttctcaataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttatt 56  Q
    ||||| ||||| |||| ||||||||| ||||||||||||||| |||| |||||||||    
T  6391918 ttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatt 6391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 41625593 - 41625549
Alignment:
Q  30 tttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||| |||| |||||||||  ||||||||||||||||    
T  41625593 tttttacatcttcctatgaaacttatttcaaagaaaacacaaaaa 41625549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 2229300 - 2229383
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  2229300 ataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 2229383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20281644 - 20281727
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  20281644 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 20281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 47867932 - 47868015
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  47867932 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 47868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 39078207 - 39078292
Alignment:
Q  4 tcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  39078207 tcaataactaatagccaatgaaaattgtttttacatctt-ctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 39078292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 7654676 - 7654755
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  7654676 aatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatttt 7654755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 4058768 - 4058851
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||| ||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  4058768 ataaccaataaccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 4058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 26916378 - 26916461
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||| ||  ||||||||||| |||||| ||||||||||||    
T  26916378 ataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaccatactccaaatt 26916461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 55580723 - 55580806
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaac-acaaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||| ||||| ||| ||||||||| | |||||||||||||||||||    
T  55580723 ataactaatagccaatgaaaattgtttttacatcttcctatacaactttttccaaagaaaacaaaaaaaactatactccaaatt 55580806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46070627 - 46070549
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactat 78  Q
    ||||||||||| || | ||||| ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  46070627 ttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagacaacacaaaaactat 46070549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 41414704 - 41414631
Alignment:
Q  13 aatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactcca 84  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||    
T  41414704 aatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactcca 41414631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 14332813 - 14332881
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  14332813 ataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 14332881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 35310841 - 35310773
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  35310841 ataaccaatagccaatgaaaattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaa 35310773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5483383 - 5483292
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    ||||| ||||| | |||||||| ||||||||||||||||||| |||| |||||||||  |||||||||||| |||| |||||| ||||||||    
T  5483383 ttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttattttaaagaaaacacaaaaaattatacttcaaatttt 5483292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 16604945 - 16604862
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||| ||||||| ||||||||||| ||  |||||||||||| |||||||||||| |||||    
T  16604945 ataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactctaaatt 16604862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20716233 - 20716316
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||| ||||  ||||| |||||||||||||||    
T  20716233 ataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaacaaaagtcaaaagactatactccaaatt 20716316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 24940435 - 24940501
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||||||||||||  |||||||||| ||| |||||||| || |||||||||||||||||||    
T  24940435 aaaattgtttttacatcttcttataaaactttttccaaagaaaatacaaaaaactatactccaaatt 24940501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 17794634 - 17794557
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||  ||||||||| | |||||||||||| ||||||    
T  17794634 aatagccaatgaaaattgtttttacatcttcctataaaatttatttcaaagaaaacgcaaaaaactatacttcaaatt 17794557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 42915583 - 42915651
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  42915583 ataaccaattgccaatgaaaattgtttttacatctttccatgaaacttattccaaagaaaacacaaaaa 42915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 56318169 - 56318101
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||    
T  56318169 ataaccaatagctaatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaa 56318101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 10069750 - 10069833
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||   ||||||| || |||||||||||| ||||||    
T  10069750 ataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcgaagaaaatacaaaaaactatactacaaatt 10069833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 29511495 - 29511546
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  29511495 aaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaa 29511546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 48793727 - 48793660
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa 73  Q
    ||||| ||| |||||| ||||||||||||||||||| | || |||||||||| |||||||||||||||    
T  48793727 ataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaa 48793660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8178344 - 8178274
Alignment:
Q  1 ttctcaataacaaatagccaata-aaattgtttttacatcttgctataaaacttattcaaaagaaaacaca 70  Q
    ||||||||||| |||| |||||| ||||||||||||||||||  |||||||||||||  ||||| ||||||    
T  8178344 ttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatttcaaagataacaca 8178274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47516296 - 47516222
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||| || | ||||| |||||||||||||| |||| ||||||||||||||  ||||| ||||||||||    
T  47516296 ttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaaagataacacaaaaa 47516222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 16473828 - 16473884
Alignment:
Q  33 ttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||| ||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 16473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28669100 - 28669032
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||| ||||| |||||||||||||||| || ||||||||| | ||| ||||||||||||||||    
T  28669100 ataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaa 28669032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 32323344 - 32323276
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    ||||||||||||||||||| | ||||| ||||||  |||||||||||| ||||| ||||| ||||||||    
T  32323344 aaaattgtttttacatcttcccataaatcttattttaaagaaaacacaaaaaacaatacttcaaatttt 32323276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5064737 - 5064686
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| || |||||||||||  ||||| ||||||||||    
T  5064737 aaaattgtttttacatcttcctttaaaacttatttcaaagataacacaaaaa 5064686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 21722764 - 21722705
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatact 81  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||| |||| ||||||||    
T  21722764 aaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatact 21722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 28142704 - 28142653
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||| | ||||||||||||||  ||||| ||||||||||    
T  28142704 aaaattgtttttacatcctcctataaaacttattttaaagataacacaaaaa 28142653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 29203559 - 29203642
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||    ||  ||||||||||| ||||| |||||||||||||    
T  29203559 ataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaatttgcaaagaaaacacaaaaaattatactccaaatt 29203642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 32410398 - 32410449
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||| |||||||||||| ||||||||||||||  ||||| ||||||||||    
T  32410398 aaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 32410449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 37911954 - 37912005
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||||||| || ||||||||||||||  ||||| ||||||||||    
T  37911954 aaaattgtttttacatatttctataaaacttattttaaagataacacaaaaa 37912005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 49080327 - 49080378
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| || |||||||    
T  49080327 aaaattgtttttacatcttcctataaaacttatttcaaagataagacaaaaa 49080378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 1585440 - 1585367
Alignment:
Q  13 aatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaa 86  Q
    |||||||||||||| ||||||| ||||||| | || |||||||||  ||||||||||| |||| |||||||||||    
T  1585440 aatagccaataaaaattgttttaacatctttccatgaaacttatttcaaagaaaacac-aaaattatactccaaa 1585367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17799239 - 17799182
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattc 57  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| | |||||||| ||||    
T  17799239 ttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattc 17799182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 31280280 - 31280325
Alignment:
Q  44 tataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||    
T  31280280 tataaaacttattccaaagaaaacacaaaaaactatactctaaatt 31280325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 50145795 - 50145848
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaa 65  Q
    |||||||||| |||||||| |||||||||| | ||||||||||||| |||||||    
T  50145795 aatagccaatgaaaattgtgtttacatcttcccataaaacttattccaaagaaa 50145848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 8683405 - 8683337
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| |||||| ||||||||| || | || |||||||||| ||||||||||||||||    
T  8683405 ataaccaattgccaatgaaaattatttttacatatttccatgaaacttattccaaagaaaacacaaaaa 8683337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45660414 - 45660503
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  45660414 ttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 45660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 6110304 - 6110221
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  6110304 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagctatactccaaatt 6110221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 3201381 - 3201449
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  3201381 ataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaa 3201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 19264155 - 19264223
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  19264155 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 19264223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11617079 - 11617162
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||| | ||||||||||||||||||||    
T  11617079 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaataccaaaaactatactccaaatt 11617162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14874012 - 14874099
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaa 86  Q
    ||||| ||||| |||||||||| |||||| |||||||||||| ||||||||||| ||  ||||||||||| |||||||||||||||||    
T  14874012 ttctccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaa 14874099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 24204634 - 24204551
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaa-aaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||| |||||||| || ||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  24204634 ataaccaatagccaatgaaaattgattttacatattcctataaaacttattccaaagaaaacacaataaattatactccaaatt 24204551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 28599253 - 28599170
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  28599253 ataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactatactccaaatt 28599170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35517178 - 35517261
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| |||||| |||||||||||  ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  35517178 ataaccaatagccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaaactatactccaaatt 35517261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 35115892 - 35115825
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt-caaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  35115892 aaaattgtttttacatctttctataaaacttattaaaaaaaaaaacacaaaaaactatactccaaatt 35115825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28858362 - 28858432
Alignment:
Q  5 caataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||| ||  ||||||||||||||||    
T  28858362 caataaccaatagccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaa 28858432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33198742 - 33198668
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  33198742 ttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttcttttaaagaaaacacaaaaa 33198668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 40584486 - 40584436
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa 73  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  40584486 aaaattgtttttacatcttcccataaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 45085329 - 45085395
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||| || |||||||||||||||||||    
T  45085329 aaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatactccaaatt 45085395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 6766038 - 6765953
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatttt 90  Q
    ||||| ||||| |||||||| ||||||||||||||| |||||||| |||||| || |||||||  |||||||||||| ||||||||    
T  6766038 ataaccaatagtcaataaaaattgtttttacatcttcctataaaatttattccaatgaaaacataaaaaactatacttcaaatttt 6765953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 8701657 - 8701742
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||| | || |||||||||| ||||||||||  ||||||||| || ||||||||    
T  8701657 ataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaatttt 8701742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 12938303 - 12938380
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| |||||||||||||||  || ||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  12938303 aatagccaatgaaaattgtttttacactttcctataaaacttatttcaaagaaagcacaaaaaactatactccaaatt 12938380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 9864807 - 9864740
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca--aaaactatactccaaatt 88  Q
    |||||||||||||| |||| | || |||||||||| ||||||||||||  ||||||||||||||||||    
T  9864807 aaaattgtttttacctcttcccatgaaacttattccaaagaaaacacaaaaaaactatactccaaatt 9864740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 25572100 - 25572168
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||| ||||| ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  25572100 ataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaa 25572168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 29524146 - 29524078
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  29524146 ataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaa 29524078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 4891727 - 4891676
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  4891727 aaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 4891676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 26998389 - 26998440
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  26998389 aaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaa 26998440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33677532 - 33677623
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatttt 90  Q
    ||||| ||||| ||||| |||| ||||||||||||||||||| |||||||||||| | |||| ||||||  ||||||||| || ||||||||    
T  33677532 ttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttt 33677623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 41528311 - 41528394
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||   |||  ||||||||||| |||||||||||| ||||||    
T  41528311 ataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaactatacttcaaatt 41528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 43415473 - 43415524
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  43415473 aaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaa 43415524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 5963256 - 5963323
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||||||| || |||||||||||  | ||||||||||||| ||||||||||||||||    
T  5963256 ataaccaatagccaataaaaattatttttacatctccc-ataaaacttattctaaagaaaacacaaaaa 5963323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 32010174 - 32010225
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||| |||||||||||| ||||||||||||||  ||||| ||||||||||    
T  32010174 aaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaa 32010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 32273743 - 32273794
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||| ||||| ||||||||||||||  ||||| ||||||||||    
T  32273743 aaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaa 32273794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 38071067 - 38071118
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| || |||||||||||  ||||| ||||||||||    
T  38071067 aaaattgtttttacatcttcctgtaaaacttatttcaaagataacacaaaaa 38071118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 40808807 - 40808757
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  40808807 aaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 28678746 - 28678688
Alignment:
Q  13 aatagccaataaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaa 71  Q
    |||| ||||||||| ||||||||||| || |||||| |||||||||||| | |||||||    
T  28678746 aataaccaataaaaatgtttttacatttttctataacacttattcaaaaaataacacaa 28678688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 35022971 - 35023036
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| |||| ||||||| || ||| ||||||| ||||| |||||||||||||    
T  35022971 aaaattgtttttacatcttcctatgaaacttactccaaa-aaaacacaaaaaattatactccaaatt 35023036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 4707493 - 4707558
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaat 87  Q
    ||||||||||| ||||||| |  | |||||||||| || |||||||| ||||||||||||||||||    
T  4707493 aaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaaactatactccaaat 4707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 7645326 - 7645249
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    |||||||||| |||||||||||||||| || | || ||| |||||| || |||||||||||| | |||||||||||||    
T  7645326 aatagccaatgaaaattgtttttacatgttcccatgaaatttattctaaggaaaacacaaaatattatactccaaatt 7645249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16495014 - 16494981
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  16495014 aaaattgtttttacatcttcctataaaacttatt 16494981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 44455086 - 44455127
Alignment:
Q  48 aaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  44455086 aaacttattcaaaataaaacacaaaaaactatactccaaatt 44455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16179686 - 16179642
Alignment:
Q  13 aatagccaataaaatt-gtttttacatcttgctataaaacttatt 56  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||    
T  16179686 aataaccaataaaatttgtttttacatctttctataaaacttatt 16179642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 6785511 - 6785591
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaa 85  Q
    ||||| |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||    
T  6785511 ataaccaatagccaatgaaaattgtttttacatcttcatataaaactttttcaaaagaaaacacaaaaaactatactccaa 6785591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 2126093 - 2126176
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||    
T  2126093 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatattccaaatt 2126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11241082 - 11241165
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  11241082 ataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 11241165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 39555692 - 39555609
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||||| ||||||||||||||    
T  39555692 ataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaacctatactccaaatt 39555609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 43765349 - 43765435
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac--aaaaactatactccaaatttt 90  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  43765349 ataacaaataaccaatgaaaaatgtttttacatcttcctataaaacttattctaaagaaaacacaaaaaaactatactacaaatttt 43765435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6786893 - 6786976
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| |||||||| ||||||||||  |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  6786893 ataaccaatagccaatgaaaattgtgtttacatcttcatataaaactttttccaaagaaaacacaaaaaactatactccaaatt 6786976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 12449073 - 12448990
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||    
T  12449073 ataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 12448990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 15959746 - 15959663
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| |||| |||||||||||||    
T  15959746 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 15959663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 24190524 - 24190607
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||   |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  24190524 ataaccaatagccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactatactccaaatt 24190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 33369606 - 33369690
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||   |||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  33369606 ataaccaatagccaatgaaaattgtttttacatctca-tataaaactttttccaaagaaaacacaaaaaactatactccaaatttt 33369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 39932672 - 39932595
Alignment:
Q  13 aatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    |||||||||||||| ||||||||| |||||  ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  39932672 aatagccaataaaaattgtttttatatcttcttataaaacttattaaaaaaaaaacacaaaaaactatactccaaatt 39932595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 52984994 - 52985071
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| |  | |||||||||| ||||||||||| |||||||||||||||||||    
T  52984994 aatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaatt 52985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 2246114 - 2246035
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    |||||||||| |||||| ||||||||| || ||||||||||||||  |||||||||||| |||||||||||| |||||||    
T  2246114 aatagccaatgaaaattctttttacatattcctataaaacttatttcaaagaaaacacaaaaaactatactctaaatttt 2246035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3875116 - 3875042
Alignment:
Q  14 atagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    ||||||||||||| |||||||||||| || ||||||||||| ||||||| ||||||| ||||||||||| ||||||    
T  3875116 atagccaataaaaattgtttttacatattcctataaaactttttcaaaaaaaaacac-aaaactatacttcaaatt 3875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 28016852 - 28016769
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| | ||  |||||||||| |||||||||||||| |||||    
T  28016852 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacatttttcaaagaaaacaccaaaaactatactctaaatt 28016769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 32624111 - 32624028
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||| ||||||||||    
T  32624111 ataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactacactccaaatt 32624028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35691448 - 35691531
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||||||| ||||||||||||||  ||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  35691448 ataaccaatagccaataaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 35691531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 3861795 - 3861733
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  3861795 aatagccaatgaaaattgtttttacatctttcaataaaacttattctaaagaaaacataaaaa 3861733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 10558856 - 10558785
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaa 85  Q
    |||||||||| ||||||||||||||||||| | |||||| |||||| |||||||||||  ||||||||||||||    
T  10558856 aatagccaatgaaaattgtttttacatcttcccataaaaattattccaaagaaaacac--aaactatactccaa 10558785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 42965921 - 42965837
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||| || ||| ||||||||||| |||||||| ||| ||||||||    
T  42965921 ataaccaatagccaatgaaaattgtttttacatcttcctataaaa-tttttccaaagaaaacacaaaaaactaaacttcaaatttt 42965837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5858483 - 5858427
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||    
T  5858483 ttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 44148942 - 44148874
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  44148942 ataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaa 44148874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 24728716 - 24728665
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  24728716 aaaattgtttttacatcttcccatgaaacttattcgaaagaaaacacaaaaa 24728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 40718739 - 40718818
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||||||||| |||||||||| |||| |||  |||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  40718739 aatagccaatgaaaattgtttctacaacttcatataaaacttttttcaaagaaaacacaaaaaactatactccaaatttt 40718818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 7468063 - 7468001
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||| |||||||| |||||||||| || |||||||| ||| ||||||||||||||||    
T  7468063 aatagccaatgaaaattgtatttacatcttcctttaaaactttttccaaagaaaacacaaaaa 7468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30221774 - 30221848
Alignment:
Q  1 ttctcaataacaaatagccaataaaat-tgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||| |||||||||  |||||||||||||| | ||||||||||||  ||||||||||||||||    
T  30221774 ttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaa 30221848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33431608 - 33431682
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||||||||| |||||||||||| |||| | ||||||||||| || |||| ||||||||||||    
T  33431608 ttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaacttttttaaaaaaaaacacaaaaa 33431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 3076350 - 3076418
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| |||||| |||||||||||| | ||||||||||||| ||| ||||||||||||    
T  3076350 ataaccaattgccaatgaaaattatttttacatcttcccataaaacttattccaaataaaacacaaaaa 3076418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16688185 - 16688241
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| || | ||||| ||||||||||||||||||| ||||||||||||||    
T  16688185 ttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 16688241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 32983260 - 32983193
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||||||||||||||||||  |||||||||| ||| ||||||||||| |||||||||||| | ||||||    
T  32983260 aaaattgtttttacatcttcttataaaactt-ttccaaagaaaacacaaaaaactatacttccaatttt 32983193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 43667409 - 43667341
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| |||||||||||||| |||| ||||||||||| ||  ||||||||||||||||    
T  43667409 ataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaa 43667341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 7397778 - 7397829
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| |||||||| |||||  ||||| ||||||||||    
T  7397778 aaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaa 7397829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 45226193 - 45226276
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| ||||| |||| |||||||||||||| |||| ||||||||||| ||  |||||||| ||| |||||||||||| |||||    
T  45226193 ataaccaatagtcaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaatacataaaactatactctaaatt 45226276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 46543055 - 46543122
Alignment:
Q  24 aaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||||||||| |||||| |||||||  || ||  ||||||||||| |||||||||||||||||||||    
T  46543055 aaattgttttttcatcttcctataaattttttttcaaagaaaacacaaaaaactatactccaaatttt 46543122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 50176594 - 50176645
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| |||||||| |||||  ||||| ||||||||||    
T  50176594 aaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaa 50176645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 50370016 - 50370063
Alignment:
Q  7 ataacaaatagccaata-aaattgtttttacatcttgctataaaactt 53  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  50370016 ataaccaatagccaatagaaattgtttttacatcttcctataaaactt 50370063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 1034929 - 1034979
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa 73  Q
    ||||||||||||| |||||   ||||||||||||| |||||||||||||||    
T  1034929 aaaattgtttttatatcttctcataaaacttattccaaagaaaacacaaaa 1034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25391731 - 25391804
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| | |||||||| |||||||||||||||| ||  ||||||||||| || ||||||||||||||||    
T  25391731 ttctccataactattagccaatgaaaattgtttttacattttcatataaaactta-tctaaagaaaacacaaaaa 25391804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 37735483 - 37735421
Alignment:
Q  13 aatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||||| |||||||||| |||| | || |||||||||| |||||||| |||||||    
T  37735483 aatagccaataaaaattgtttttacttcttcccatgaaacttattccaaagaaaatacaaaaa 37735421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41063790 - 41063840
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaa 50  Q
    |||||||||||||||| ||||| |||||| |||||||||||| ||||||||    
T  41063790 ttctcaataacaaataaccaatgaaaattatttttacatctttctataaaa 41063840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 46818614 - 46818540
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| | |||||||| ||||||||||||| ||||| ||||||||||| ||  |||||||| |||||||    
T  46818614 ttctccataactattagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaatacaaaaa 46818540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 5950511 - 5950544
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  5950511 aaaattgtttttacatcttcctataaaacttatt 5950544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 8889786 - 8889753
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  8889786 aaaattgtttttacatcttcctataaaacttatt 8889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15912270 - 15912303
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  15912270 aaaattgtttttacatcttcctataaaacttatt 15912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 28120855 - 28120782
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactcca 84  Q
    |||||||||| ||||||||||||||||||| | |||||| | |||  ||| |||||||| ||||||||||||||    
T  28120855 aatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactatactcca 28120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32318672 - 32318611
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaa 61  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||| | |||||||||||| ||||    
T  32318672 ttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaa 32318611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35366312 - 35366259
Alignment:
Q  4 tcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    |||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||    
T  35366312 tcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 47600139 - 47600098
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaactt 53  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  47600139 aatagccaatgaaaattgtttttacatcttcctataaaactt 47600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 47014597 - 47014529
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||| |||||||||||||||| || ||||||||||| ||  || |||||||||||||    
T  47014597 ataaccaatagtcaatgaaaattgtttttacattttcctataaaacttttttcaacgaaaacacaaaaa 47014529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 34890281 - 34890198
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  34890281 ataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattatactccaaatt 34890198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 36190825 - 36190908
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||| ||||||||||||| |||||    
T  36190825 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactctaaatt 36190908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 43216437 - 43216371
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||    
T  43216437 aaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 43216371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 7022510 - 7022425
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    ||||| |||||||||| |||||| |||||| ||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||||    
T  7022510 ataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttt 7022425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 31734174 - 31734251
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  31734174 aatagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 31734251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 28348663 - 28348746
Alignment:
Q  7 ataacaaatagccaata-aaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    ||||| ||||||||||  ||||||||||||||| || ||||||||||| ||| |||||||| |||||| |||||||||||||||    
T  28348663 ataaccaatagccaatggaaattgtttttacatattcctataaaactttttccaaagaaaatacaaaatactatactccaaatt 28348746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 7858598 - 7858664
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||| ||  ||| ||||||| |||||||||||||||||||    
T  7858598 aaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactatactccaaatt 7858664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 8711930 - 8712011
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaat 87  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||| ||| ||| ||||||| ||||||||||||||||||    
T  8711930 ataaccaatagccaatgaaaattatttttacatcttcctataaaactttttccaaa-aaaacacaaaaaactatactccaaat 8712011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 26483591 - 26483668
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||  ||||||||||| ||  ||||||||||| |||||||||||| ||||||    
T  26483591 aatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaactatacttcaaatt 26483668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 35456125 - 35456049
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaaca-caaaaactatactccaaatt 88  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||  |||||||||||| ||||||    
T  35456125 aatagccaatgaaaattgtttttacatctttctataaaactttttcaaaa-aaaacataaaaaactatacttcaaatt 35456049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 4480845 - 4480913
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactccaaatttt 90  Q
    |||||| |||||||||||| | ||||||||||||  ||||| |||||||||| ||||||||||||||||    
T  4480845 aaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatttt 4480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 15824725 - 15824661
Alignment:
Q  25 aattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||||||||||||||| | || |||||||||| |||||||||||| ||||||||||| ||||||    
T  15824725 aattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatacttcaaatt 15824661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 13144036 - 13143969
Alignment:
Q  23 aaaattgtttttacatcttgctataaaac-ttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||| || ||  ||||||||||| |||||||||||||||||||    
T  13144036 aaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactccaaatt 13143969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 41086487 - 41086408
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||  |||||||||||| ||||||||| | ||||||||    
T  41086487 aatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactataattcaaatttt 41086408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 41362397 - 41362346
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  41362397 aaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 41362346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 29920369 - 29920307
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||| ||||||||||||||||||| | || |||||||||| ||||| ||||||||||    
T  29920369 aatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagataacacaaaaa 29920307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35525640 - 35525721
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    ||||| ||||| |||| ||||||||||||||||||| || |||||||| ||  ||||||||||| |||||||||||| |||||    
T  35525640 ataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaacac-aaaactatactctaaatt 35525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 44663890 - 44663816
Alignment:
Q  13 aatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||||||||||| || |||||||||||| | |||||| |||||| |||||||||||  ||||||||||| |||||    
T  44663890 aatagccaataaaaattatttttacatctttccataaaatttattccaaagaaaacac--aaactatactctaaatt 44663816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 15958018 - 15957938
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaa-aaactatactccaa 85  Q
    ||||| |||||| ||| |||||||||||||| | || ||||||||||| ||  ||||||||||||| ||||||||||||||    
T  15958018 ataaccaatagcaaatgaaaattgtttttacttattcctataaaacttttttcaaagaaaacacaataaactatactccaa 15957938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26954505 - 26954449
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| || | ||||| ||||||||||||||||||| ||||||||||||||    
T  26954505 ttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 26954449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 34158398 - 34158318
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaac-ttattcaaaagaaaacacaa-aaactatactcca 84  Q
    ||||| ||||| |||| ||||||||||||||||||| ||||||||| || ||  ||||||||||||| |||||||||||||    
T  34158398 ataaccaatagtcaatgaaaattgtttttacatcttcctataaaacttttttttaaagaaaacacaacaaactatactcca 34158318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 4038971 - 4038916
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactat 78  Q
    |||||||||||||||||||  |||||||||||||  ||| | ||||||||||||||    
T  4038971 aaaattgtttttacatcttcatataaaacttatttcaaaaataacacaaaaactat 4038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 8712577 - 8712628
Alignment:
Q  7 ataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattc 57  Q
    ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||    
T  8712577 ataactaataaccaataaaaattgtttttacatctttctataaaacttattc 8712628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 3642076 - 3642042
Alignment:
Q  7 ataacaaatagccaataaaattgtttttacatctt 41  Q
    ||||| |||||||||||||||||||||||||||||    
T  3642076 ataaccaatagccaataaaattgtttttacatctt 3642042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30575942 - 30575856
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaa-cttattcaaaagaaaacacaaaaa-ctatactccaaatttt 90  Q
    ||||| |||||||||| |||||||||||||||| || || ||||| ||| ||  |||||||||||||||| || |||||||||||||    
T  30575942 ataaccaatagccaatgaaaattgtttttacattttcctgtaaaaactttttttaaagaaaacacaaaaaactttactccaaatttt 30575856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 8107725 - 8107641
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaa--acacaaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||| |  | |||||||| ||  |||||||  ||| |||||||||||||||||||    
T  8107725 ataaccaatagccaatgaaaattgtttttacatcatattgtaaaacttttttcaaagaaaatacaaaaaaactatactccaaatt 8107641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8709899 - 8709810
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||| |||| |||| |||| ||||||||| |||| | || | |||||||  |||||||||||| ||||||||||||||||||    
T  8709899 ttctccataacatatagtcaatgaaaaatgtttttacttcttcccatgagacttatttcaaagaaaacacaaaaaactatactccaaatt 8709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8745653 - 8745686
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  8745653 aaaattgtttttacatcttcctataaaacttatt 8745686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 17713273 - 17713326
Alignment:
Q  4 tcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    |||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  17713273 tcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2628277 - 2628221
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||  |||| ||||| |||||| |||||||||||| ||||||||||||||    
T  2628277 ttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5217439 - 5217495
Alignment:
Q  1 ttctcaataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttatt 56  Q
    ||||| ||||| |||| ||||||||| ||||||||||||||| |||| |||||||||    
T  5217439 ttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatt 5217495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 16358201 - 16358134
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactccaaatttt 90  Q
    ||||||| ||||||||||| |||| |||||| |||||| ||||||| ||||| ||||||| ||||||||    
T  16358201 aaaattgattttacatcttcctatgaaactttttcaaa-gaaaacaaaaaaaactatacttcaaatttt 16358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 30189630 - 30189713
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  30189630 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 30189713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 37042476 - 37042397
Alignment:
Q  13 aatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||| || ||||||||| ||||||||||||||||||||    
T  37042476 aatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactatactccaaatttt 37042397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6438136 - 6438225
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||||||||| ||||||||||||||||||| ||||||| ||| ||  ||||||||||| |||||||||||||||||||    
T  6438136 ttctccataaccaatagccaatgaaaattgtttttacatcttcctataaagcttttttcaaagaaaacacaaaaaactatactccaaatt 6438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 23311658 - 23311573
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||  |||||||||||| |||||||||||| |||||||    
T  23311658 ataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactatactctaaatttt 23311573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28875459 - 28875548
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaa-aactatactccaaatt 88  Q
    ||||| ||||| |||||||||| |||||||||||||||||||  |||||||||| ||| |||||||||||||| ||||||| ||||||||    
T  28875459 ttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaataactatagtccaaatt 28875548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30454795 - 30454740
Alignment:
Q  1 ttctcaataacaaatagccaataaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  30454795 ttctcaataaccaataaccaataaaattgtttttacatctttctataaaacttatt 30454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 9264608 - 9264693
Alignment:
Q  5 caataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||| |||||||||| |||||||||||||||||||  |||||||||| ||  ||||||||||| ||||||||||||| |||||    
T  9264608 caataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaatt 9264693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 20847316 - 20847251
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    ||||||||||  ||||||| |||| |||||||||| |||||||||||||||| |||||||||||||    
T  20847316 aaaattgtttgcacatcttcctatgaaacttattccaaagaaaacacaaaaattatactccaaatt 20847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32619901 - 32619812
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaa-actatactccaaatt 88  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||  |||||||| ||||| ||||||||||||||| | |||||||||||||    
T  32619901 ttctccataaccaatagccaatgaaaattatttttacatcttcttataaaacctattccaaagaaaacacaaaatattatactccaaatt 32619812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35963205 - 35963294
Alignment:
Q  1 ttctcaataacaaatagccaataaaa-ttgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||| ||||||||| |||||||| |||||| ||||||||||| ||| ||| ||||||| |||||||||||||||||||    
T  35963205 ttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttttccaaacaaaacacaaaaaactatactccaaatt 35963294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 41476393 - 41476316
Alignment:
Q  15 tagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatttt 90  Q
    |||||||| |||||| |||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||||    
T  41476393 tagccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttt 41476316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 11054377 - 11054293
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaac-ttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||| ||||| ||||||||| || ||| ||||||||||| |||||||||||||||||||    
T  11054377 ataaccaatagccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaatt 11054293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 37075019 - 37075087
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| |||||||| |||||||||| ||||||||||| ||| ||||||||||||||||    
T  37075019 ataaccaatagccaatgaaaattgtgtttacatcttcctataaaactttttccaaagaaaacacaaaaa 37075087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 8703173 - 8703247
Alignment:
Q  13 aatagccaataaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||||||| |||||||||||||||||| |||||||  || ||| ||| || |||||||||||||||||||||||    
T  8703173 aatagccaatgaaattgtttttacatcttcctataaatttttttccaaa-aacacacaaaaactatactccaaatt 8703247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 9055060 - 9055134
Alignment:
Q  13 aatagccaataaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactatactccaaatt 88  Q
    |||||||||| |||||||||||||||||| |||||||  || ||| ||| || |||||||||||||||||||||||    
T  9055060 aatagccaatgaaattgtttttacatcttcctataaatttttttccaaa-aacacacaaaaactatactccaaatt 9055134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 23910578 - 23910495
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactccaaatt 88  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||| ||  |||||||||||||||| |||||||| |||||    
T  23910578 ataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaatt 23910495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 46711723 - 46711640
Alignment:
Q  7 ataacaaatagccaataaa-attgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| || |||||||||||||||| ||||||||||| ||  |||||||||||| |||| |||||||||||||    
T  46711723 ataaccaatagccaatgaatattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 46711640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50651108 - 50651034
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| ||||| |||| ||||||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  50651108 ttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttgcaaagaaaacacaaaaa 50651034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 36546601 - 36546686
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||| ||||||||||| |||| |||||| ||| |||||||| || ||||||||||||| |||||||    
T  36546601 ataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttt 36546686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36561714 - 36561629
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    ||||| |||||||||| ||||||| ||||||||||| |||| |||||| ||| |||||||| || ||||||||||||| |||||||    
T  36561714 ataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaatttt 36561629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 579203 - 579135
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| ||||||||||||| ||||| ||||||||||| ||  ||||||||||||||||    
T  579203 ataaccaatagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaa 579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 2927348 - 2927416
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| |||||||||| |||||| |||||||||||| | ||||||||||||| |||||||| |||||||    
T  2927348 ataaccaatagccaatgaaaattatttttacatcttcccataaaacttattccaaagaaaatacaaaaa 2927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34194935 - 34194991
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||    
T  34194935 ttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 34194991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 3972351 - 3972401
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  3972351 aaaattgtttttacatcttcccataaaacttattc-aaagaaaacacaaaaa 3972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 3997527 - 3997477
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  3997527 aaaattgtttttacatcttcccataaaacttattc-aaagaaaacacaaaaa 3997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 14752273 - 14752190
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| ||||| |||| ||||||||||||||||||| |||||||  || ||| |||||||||||| |||| |||||||||||||    
T  14752273 ataaccaatagtcaatgaaaattgtttttacatcttcctataaatttttttccaaagaaaacacaaaaaattatactccaaatt 14752190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6752723 - 6752797
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||||||||| ||||||||||||||||||| | || ||||||||| |||| ||||| ||||||    
T  6752723 ttctccataaccaatagccaattaaaattgtttttacatctttccatgaaacttattaaaaaaaaaacccaaaaa 6752797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 26208078 - 26208156
Alignment:
Q  12 aaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||| ||||||||||||||||||| | || |||||||||| | | ||||||| ||||||||||||| |||||    
T  26208078 aaatagccaatgaaaattgtttttacatcttaccatgaaacttattccagacaaaacacaaaaaactatactctaaatt 26208156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 47864267 - 47864333
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||||||||||||||||| ||||||||||| ||  ||||||||  | |||||||||||||||||||    
T  47864267 aaaattgtttttacatcttcctataaaacttttttcaaagaaaatgcaaaaaactatactccaaatt 47864333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 16033055 - 16033002
Alignment:
Q  4 tcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||    
T  16033055 tcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatt 16033002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 50730191 - 50730251
Alignment:
Q  30 tttttacatcttgctataaaacttattcaaaagaaa--acacaaaaactatactccaaatt 88  Q
    |||||||||||| ||||||||||| ||| |||||||  ||| |||||||||||||||||||    
T  50730191 tttttacatcttcctataaaactttttccaaagaaagcacaaaaaaactatactccaaatt 50730251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 50782663 - 50782603
Alignment:
Q  30 tttttacatcttgctataaaacttattcaaaagaaa--acacaaaaactatactccaaatt 88  Q
    |||||||||||| ||||||||||| ||| |||||||  ||| |||||||||||||||||||    
T  50782663 tttttacatcttcctataaaactttttccaaagaaagcacaaaaaaactatactccaaatt 50782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7886688 - 7886632
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| |||||||| |||||    
T  7886688 ttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatt 7886632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46918284 - 46918228
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  46918284 ttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttatt 46918228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6075140 - 6075223
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||| |||||| |||||||||||||| |||| || ||| |||| ||| ||||||||||| ||||| |||||||||||||    
T  6075140 ataaccaatggccaatgaaaattgtttttacttcttcctgtaacactttttccaaagaaaacacaaaaaattatactccaaatt 6075223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 10114981 - 10115032
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||||| || |||||||    
T  10114981 aaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaa 10115032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 21214311 - 21214362
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  ||| | ||||||||||    
T  21214311 aaaattgtttttacatctttctataaaacttatttcaaaaataacacaaaaa 21214362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 22479102 - 22479051
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||| |||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  22479102 aaaagtgtttttacatcttcctataaaacttatttcaaagataacacaaaaa 22479051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 25242226 - 25242175
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||| |||||| ||||||||||||||  ||||| ||||||||||    
T  25242226 aaaattgttttttcatctttctataaaacttattttaaagataacacaaaaa 25242175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 26725039 - 26724988
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||||||||||   | ||||||||||| ||||||||||||||||    
T  26725039 aaaattgtttttacatcttctcagaaaacttattccaaagaaaacacaaaaa 26724988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 29235246 - 29235329
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| |||||||||| |||||| |||||||||||| |||| |||| | ||| |||||||| || ||||||||||||| |||||    
T  29235246 ataaccaatagccaatgaaaattatttttacatcttcctattaaacgttttctaaagaaaatacaaaaaactatactctaaatt 29235329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 31836995 - 31837058
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaa 85  Q
    |||||||||||| ||| || ||||||||||| ||| |||||||| || ||||||||||||||||    
T  31836995 aaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaa 31837058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 46557218 - 46557167
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||| |||||||||||| | || |||||||||| ||||||||||||||||    
T  46557218 aaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaa 46557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 53270294 - 53270377
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||||| |||| |||||| ||||| |||||| |||| |||||| ||  ||||||||||| |||||||||||||||||||    
T  53270294 ataaccaataggcaatgaaaattattttttcatctttctatgaaacttttttcaaagaaaacacaaaaaactatactccaaatt 53270377  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 33973615 - 33973546
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca--aaaactatactccaaatttt 90  Q
    |||||| |||| || |||| ||||||||||| ||  ||||||||||||  ||||||||||||||||||||    
T  33973615 aaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttt 33973546  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 10014339 - 10014372
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  10014339 aaaattgtttttacatcttcctataaaacttatt 10014372  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 10252081 - 10252114
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||||||||||| ||||||||||||||    
T  10252081 aaaattgtttttacatcttcctataaaacttatt 10252114  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8097089 - 8097033
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    ||||||||||  |||| ||||| |||||| |||||||||||| ||||||||||||||    
T  8097089 ttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 34722670 - 34722622
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaactta 54  Q
    ||||| |||||||||| |||||||||||||||||||  |||||||||||    
T  34722670 ataaccaatagccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 41936247 - 41936195
Alignment:
Q  22 taaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||| ||||||||||| | || |||||||||| ||| ||||||||||||    
T  41936247 taaaattgattttacatcttcccatgaaacttattctaaataaaacacaaaaa 41936195  T

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Target: scaffold0300 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 679 - 596
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||| ||  |||||||||||| ||||||||||||||||||    
T  679 ataaccaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactatactccaaatt 596  T

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Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 40234 - 40311
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa-ctatactc 82  Q
    ||||| |||||||||| ||||||||||||||| ||| |||||||| |||||| |||||||||||||||| ||||||||    
T  40234 ataaccaatagccaatgaaaattgtttttacaactttctataaaatttattccaaagaaaacacaaaaagctatactc 40311  T

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Target: scaffold0442 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 10100 - 10168
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||||| |||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  10100 ataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaa 10168  T

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Target: scaffold0132 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 1084 - 1152
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||| |||||||||||||| ||||||||||| || |||| ||||||| |||||||||||||||||||||    
T  1084 aaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttt 1152  T

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Target: scaffold0132; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 9044 - 9112
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatttt 90  Q
    |||| |||||||||||||| ||||||||||| || |||| ||||||| |||||||||||||||||||||    
T  9044 aaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttt 9112  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 154916 - 154989
Alignment:
Q  7 ataacaaatagccaata-aaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaactata 79  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||||| ||  |||||||| ||||||||||||    
T  154916 ataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatacaaaaactata 154989  T

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Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 44877 - 44794
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacaca-aaaactatactccaaatt 88  Q
    ||||| |||||||||| ||||||||||||  || || ||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  44877 ataaccaatagccaatgaaaattgttttttaatattcctataaaactttttccaaagaaaacacaaaaaaatatactccaaatt 44794  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 78012 - 78095
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacac-aaaaactatactccaaatt 88  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||| ||||| ||  ||||||||||| ||||||||||||| |||||    
T  78012 ataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactatactctaaatt 78095  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 161031 - 160975
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttatt 56  Q
    |||||||||||||||| ||||| ||||||||||||||| ||| |||| |||||||||    
T  161031 ttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatt 160975  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 157849 - 157917
Alignment:
Q  7 ataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||| ||| |||||| ||||||||||||||||||  | || |||||||||| ||||||||||||||||    
T  157849 ataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattccaaagaaaacacaaaaa 157917  T

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Target: scaffold1786 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 896 - 963
Alignment:
Q  1 ttctcaataacaaatagccaat-aaaattgtttttacatcttgctataaaacttattcaaaagaaaac 67  Q
    ||||| ||||| ||||| |||| |||||| |||||| ||||| ||||||||||||||| |||||||||    
T  896 ttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaagaaaac 963  T

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Target: scaffold0565 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5964 - 5913
Alignment:
Q  23 aaaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    ||||||||||||||||||| ||||||||||||||  || || ||||||||||    
T  5964 aaaattgtttttacatcttcctataaaacttatttcaatgataacacaaaaa 5913  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 3241 - 3291
Alignment:
Q  24 aaattgtttttacatcttgctataaaacttattcaaaagaaaacacaaaaa 74  Q
    |||||||||||| ||||| ||||||||||||||  ||||| ||||||||||    
T  3241 aaattgtttttagatcttcctataaaacttatttcaaagataacacaaaaa 3291  T

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