View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2117_high_15 (Length: 347)

Name: NF2117_high_15
Description: NF2117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2117_high_15
NF2117_high_15
[»] chr6 (26 HSPs)
chr6 (6-335)||(12635579-12635908)
chr6 (206-335)||(30788869-30788996)
chr6 (205-335)||(5253239-5253369)
chr6 (205-335)||(8932625-8932755)
chr6 (205-335)||(8944091-8944221)
chr6 (205-335)||(21898612-21898742)
chr6 (207-335)||(6606113-6606241)
chr6 (219-331)||(12606408-12606520)
chr6 (205-335)||(13036020-13036150)
chr6 (205-335)||(19089462-19089592)
chr6 (268-335)||(9633641-9633708)
chr6 (205-340)||(10311480-10311615)
chr6 (209-334)||(13468901-13469026)
chr6 (205-336)||(2271318-2271447)
chr6 (219-335)||(29333155-29333270)
chr6 (205-336)||(8611989-8612120)
chr6 (208-335)||(29444781-29444908)
chr6 (205-335)||(14107374-14107504)
chr6 (266-335)||(3601109-3601178)
chr6 (223-298)||(3587998-3588073)
chr6 (205-332)||(9179755-9179882)
chr6 (277-335)||(14783436-14783494)
chr6 (205-314)||(9366460-9366569)
chr6 (205-334)||(19230576-19230703)
chr6 (205-314)||(24671903-24672012)
chr6 (266-322)||(13391311-13391367)
[»] chr7 (39 HSPs)
chr7 (205-335)||(48804646-48804776)
chr7 (205-340)||(34659189-34659324)
chr7 (205-335)||(10047892-10048022)
chr7 (224-335)||(38578883-38578994)
chr7 (205-335)||(21530711-21530841)
chr7 (205-335)||(47341839-47341969)
chr7 (205-334)||(4195219-4195348)
chr7 (224-335)||(17748398-17748509)
chr7 (205-335)||(5069831-5069961)
chr7 (205-335)||(42210278-42210408)
chr7 (205-309)||(1797423-1797527)
chr7 (205-336)||(22993382-22993513)
chr7 (209-335)||(13095825-13095951)
chr7 (205-335)||(43346795-43346925)
chr7 (219-332)||(1605918-1606031)
chr7 (205-340)||(4228765-4228897)
chr7 (205-298)||(18785632-18785725)
chr7 (219-340)||(21190791-21190912)
chr7 (227-340)||(36619265-36619378)
chr7 (205-340)||(16802086-16802221)
chr7 (205-307)||(43925475-43925577)
chr7 (250-331)||(41945482-41945562)
chr7 (224-336)||(14535273-14535385)
chr7 (219-314)||(43862009-43862104)
chr7 (209-335)||(27028246-27028372)
chr7 (208-314)||(39420804-39420909)
chr7 (205-335)||(42032059-42032189)
chr7 (205-334)||(19914720-19914848)
chr7 (219-336)||(22973944-22974061)
chr7 (256-336)||(23658193-23658273)
chr7 (240-340)||(49142680-49142780)
chr7 (284-335)||(24983435-24983486)
chr7 (205-308)||(26423330-26423433)
chr7 (203-298)||(45447931-45448026)
chr7 (205-324)||(45960030-45960148)
chr7 (219-340)||(39474916-39475038)
chr7 (266-335)||(8734702-8734771)
chr7 (266-335)||(28396176-28396245)
chr7 (300-340)||(34127656-34127696)
[»] chr4 (46 HSPs)
chr4 (203-335)||(47078421-47078553)
chr4 (205-340)||(5472859-5472994)
chr4 (205-332)||(29895752-29895879)
chr4 (205-335)||(38165992-38166122)
chr4 (205-336)||(36262782-36262911)
chr4 (224-335)||(3159485-3159596)
chr4 (205-325)||(1446791-1446911)
chr4 (224-335)||(49260681-49260792)
chr4 (208-340)||(1940788-1940917)
chr4 (224-335)||(7246662-7246773)
chr4 (205-332)||(20532428-20532555)
chr4 (205-324)||(41162909-41163028)
chr4 (205-335)||(29588701-29588831)
chr4 (208-329)||(41339417-41339538)
chr4 (219-335)||(40272347-40272463)
chr4 (205-335)||(2559272-2559402)
chr4 (214-332)||(3507245-3507362)
chr4 (265-335)||(30317258-30317328)
chr4 (205-335)||(55920999-55921129)
chr4 (224-336)||(20128293-20128405)
chr4 (205-308)||(24166415-24166518)
chr4 (224-335)||(38075417-38075528)
chr4 (205-324)||(43458578-43458697)
chr4 (224-335)||(43468331-43468442)
chr4 (205-331)||(6779176-6779302)
chr4 (231-340)||(42722390-42722498)
chr4 (205-314)||(53599025-53599134)
chr4 (268-340)||(8424582-8424654)
chr4 (219-335)||(8889001-8889117)
chr4 (205-336)||(27248393-27248522)
chr4 (209-324)||(36145242-36145357)
chr4 (246-328)||(20354643-20354725)
chr4 (249-335)||(40780877-40780963)
chr4 (224-314)||(48015110-48015200)
chr4 (205-334)||(14123981-14124110)
chr4 (219-340)||(42722588-42722709)
chr4 (287-335)||(50485990-50486038)
chr4 (208-335)||(52950050-52950177)
chr4 (228-334)||(295550-295655)
chr4 (205-335)||(4736562-4736692)
chr4 (266-324)||(17080069-17080127)
chr4 (208-305)||(33647689-33647786)
chr4 (267-335)||(4738645-4738713)
chr4 (251-335)||(20421784-20421868)
chr4 (210-314)||(38168227-38168330)
chr4 (287-335)||(54946296-54946344)
[»] chr2 (44 HSPs)
chr2 (205-340)||(6358162-6358297)
chr2 (205-335)||(25540420-25540550)
chr2 (205-333)||(3643905-3644033)
chr2 (219-335)||(10823034-10823150)
chr2 (205-332)||(38005362-38005489)
chr2 (224-335)||(44139463-44139574)
chr2 (205-340)||(45263678-45263813)
chr2 (205-336)||(38962723-38962854)
chr2 (204-335)||(41220594-41220725)
chr2 (205-335)||(34356166-34356296)
chr2 (205-334)||(331461-331590)
chr2 (220-333)||(9360766-9360879)
chr2 (238-335)||(12455303-12455400)
chr2 (205-335)||(20612550-20612682)
chr2 (219-335)||(35946713-35946828)
chr2 (205-323)||(8410091-8410209)
chr2 (205-335)||(18902546-18902676)
chr2 (205-334)||(21286404-21286533)
chr2 (219-335)||(11069852-11069968)
chr2 (208-324)||(44945557-44945672)
chr2 (205-340)||(37560133-37560268)
chr2 (205-332)||(39806904-39807031)
chr2 (205-340)||(42770662-42770797)
chr2 (205-335)||(22593095-22593224)
chr2 (205-335)||(41031922-41032051)
chr2 (229-332)||(7787040-7787143)
chr2 (205-324)||(19976834-19976953)
chr2 (205-335)||(7747234-7747364)
chr2 (205-335)||(12864184-12864314)
chr2 (205-334)||(2550828-2550957)
chr2 (224-336)||(3811706-3811818)
chr2 (224-320)||(15079462-15079558)
chr2 (267-335)||(27725962-27726030)
chr2 (224-335)||(10669571-10669682)
chr2 (249-336)||(43303307-43303394)
chr2 (205-335)||(10026632-10026762)
chr2 (205-335)||(10046493-10046622)
chr2 (224-328)||(16034916-16035020)
chr2 (269-333)||(29653651-29653714)
chr2 (219-335)||(34346303-34346419)
chr2 (285-340)||(21641990-21642045)
chr2 (205-319)||(21180346-21180460)
chr2 (266-335)||(16325616-16325685)
chr2 (224-336)||(28616394-28616506)
[»] scaffold0002 (2 HSPs)
scaffold0002 (205-333)||(319385-319513)
scaffold0002 (234-298)||(139427-139491)
[»] scaffold0170 (1 HSPs)
scaffold0170 (205-336)||(9808-9939)
[»] chr8 (26 HSPs)
chr8 (205-331)||(2467138-2467264)
chr8 (205-340)||(14666082-14666217)
chr8 (205-336)||(8141066-8141197)
chr8 (205-308)||(38922457-38922560)
chr8 (205-335)||(15884572-15884701)
chr8 (238-336)||(6042818-6042916)
chr8 (205-335)||(44893294-44893424)
chr8 (205-314)||(1013014-1013123)
chr8 (205-336)||(43032865-43032996)
chr8 (205-331)||(17981405-17981531)
chr8 (205-335)||(45521133-45521262)
chr8 (207-340)||(6100438-6100571)
chr8 (205-322)||(13085488-13085605)
chr8 (208-336)||(2964043-2964171)
chr8 (205-332)||(9860014-9860142)
chr8 (205-340)||(18373974-18374109)
chr8 (205-332)||(24837206-24837333)
chr8 (205-291)||(6940522-6940608)
chr8 (265-335)||(11298283-11298353)
chr8 (205-339)||(33401811-33401945)
chr8 (266-335)||(4479312-4479381)
chr8 (266-322)||(7673686-7673742)
chr8 (227-335)||(10927592-10927700)
chr8 (205-308)||(34846778-34846880)
chr8 (224-322)||(44031464-44031567)
chr8 (284-324)||(18091443-18091483)
[»] chr5 (40 HSPs)
chr5 (205-334)||(19572685-19572814)
chr5 (205-335)||(1538392-1538522)
chr5 (205-335)||(42861234-42861364)
chr5 (205-333)||(30349540-30349668)
chr5 (208-332)||(38897738-38897861)
chr5 (205-332)||(20525799-20525926)
chr5 (205-336)||(25417198-25417329)
chr5 (209-335)||(42086292-42086418)
chr5 (205-334)||(7866542-7866671)
chr5 (207-334)||(1898964-1899085)
chr5 (222-334)||(20682634-20682746)
chr5 (205-336)||(9812833-9812964)
chr5 (228-331)||(12081892-12081995)
chr5 (205-328)||(14152011-14152134)
chr5 (256-335)||(32874799-32874878)
chr5 (205-335)||(4016271-4016401)
chr5 (205-298)||(5731973-5732066)
chr5 (246-335)||(9805006-9805095)
chr5 (205-309)||(28857089-28857193)
chr5 (205-336)||(12704975-12705106)
chr5 (205-308)||(26077102-26077205)
chr5 (208-334)||(11845818-11845944)
chr5 (203-340)||(7308375-7308512)
chr5 (251-324)||(24463913-24463986)
chr5 (204-308)||(15034036-15034139)
chr5 (246-324)||(42291532-42291610)
chr5 (205-335)||(18136292-18136426)
chr5 (246-335)||(23383659-23383748)
chr5 (208-332)||(30995085-30995209)
chr5 (256-332)||(40117427-40117503)
chr5 (205-324)||(37263202-37263320)
chr5 (205-324)||(39728348-39728467)
chr5 (205-335)||(2485158-2485287)
chr5 (219-332)||(3653933-3654044)
chr5 (238-324)||(18262645-18262731)
chr5 (224-302)||(20692913-20692991)
chr5 (205-335)||(41163476-41163605)
chr5 (267-340)||(9168264-9168337)
chr5 (228-332)||(7336604-7336708)
chr5 (227-331)||(14588637-14588741)
[»] chr3 (49 HSPs)
chr3 (205-334)||(25294920-25295049)
chr3 (205-332)||(13893886-13894013)
chr3 (205-335)||(30767264-30767394)
chr3 (219-335)||(47219118-47219234)
chr3 (205-320)||(10855344-10855459)
chr3 (205-336)||(15320146-15320277)
chr3 (224-335)||(47749122-47749232)
chr3 (219-340)||(15795506-15795626)
chr3 (205-334)||(29135873-29136002)
chr3 (241-335)||(3507550-3507644)
chr3 (205-335)||(26207818-26207948)
chr3 (205-335)||(29127879-29128009)
chr3 (205-335)||(29762172-29762302)
chr3 (205-335)||(45877414-45877544)
chr3 (205-335)||(51682971-51683101)
chr3 (205-325)||(42412801-42412921)
chr3 (224-332)||(49198330-49198438)
chr3 (208-335)||(49543482-49543609)
chr3 (224-340)||(7328823-7328938)
chr3 (240-332)||(8164548-8164640)
chr3 (284-340)||(43330744-43330800)
chr3 (205-335)||(45402368-45402495)
chr3 (219-335)||(47471806-47471921)
chr3 (227-335)||(55069696-55069804)
chr3 (208-314)||(6462375-6462481)
chr3 (205-335)||(28572228-28572358)
chr3 (205-335)||(35315916-35316046)
chr3 (269-335)||(50405620-50405686)
chr3 (205-335)||(51060298-51060428)
chr3 (205-335)||(54261186-54261316)
chr3 (205-334)||(10040517-10040645)
chr3 (205-298)||(11687163-11687256)
chr3 (205-298)||(48341980-48342073)
chr3 (219-307)||(52364845-52364933)
chr3 (205-335)||(41630529-41630659)
chr3 (207-291)||(7612987-7613071)
chr3 (251-335)||(26361984-26362068)
chr3 (284-335)||(49021220-49021271)
chr3 (269-335)||(2029284-2029350)
chr3 (209-335)||(3136711-3136836)
chr3 (246-336)||(26043813-26043903)
chr3 (205-323)||(39849032-39849149)
chr3 (246-335)||(7310720-7310809)
chr3 (205-330)||(31072838-31072963)
chr3 (219-340)||(33251636-33251757)
chr3 (205-298)||(45450501-45450591)
chr3 (234-298)||(13167497-13167561)
chr3 (267-335)||(19146983-19147051)
chr3 (266-314)||(35923661-35923709)
[»] chr1 (42 HSPs)
chr1 (207-334)||(18915830-18915957)
chr1 (205-324)||(43959849-43959968)
chr1 (205-335)||(10172988-10173118)
chr1 (205-335)||(41663873-41664003)
chr1 (219-340)||(33004027-33004148)
chr1 (205-314)||(48798108-48798217)
chr1 (224-334)||(37339799-37339910)
chr1 (209-335)||(8763956-8764082)
chr1 (266-340)||(21849217-21849291)
chr1 (205-335)||(26325773-26325903)
chr1 (205-335)||(49078075-49078205)
chr1 (227-335)||(50503378-50503486)
chr1 (205-336)||(30927743-30927874)
chr1 (208-335)||(40288494-40288621)
chr1 (205-335)||(5855483-5855613)
chr1 (205-335)||(11397906-11398035)
chr1 (205-335)||(33418132-33418262)
chr1 (208-294)||(34334353-34334439)
chr1 (205-334)||(9659197-9659325)
chr1 (203-324)||(10336475-10336596)
chr1 (207-330)||(10422751-10422874)
chr1 (220-335)||(14254285-14254400)
chr1 (205-335)||(17642021-17642151)
chr1 (219-335)||(32142863-32142978)
chr1 (209-332)||(12036764-12036887)
chr1 (208-331)||(31152680-31152803)
chr1 (208-306)||(2980977-2981075)
chr1 (266-336)||(12744539-12744609)
chr1 (266-336)||(12755529-12755599)
chr1 (219-324)||(18649380-18649485)
chr1 (210-335)||(34719742-34719867)
chr1 (219-335)||(15465940-15466056)
chr1 (224-308)||(47312943-47313026)
chr1 (205-308)||(6563402-6563505)
chr1 (227-298)||(16263528-16263599)
chr1 (205-340)||(32150934-32151069)
chr1 (224-303)||(45536688-45536767)
chr1 (209-330)||(5063866-5063986)
chr1 (210-335)||(16956432-16956557)
chr1 (266-323)||(34697357-34697414)
chr1 (224-328)||(13262063-13262167)
chr1 (207-335)||(45361899-45362027)
[»] scaffold0006 (1 HSPs)
scaffold0006 (208-340)||(68483-68612)
[»] scaffold0010 (1 HSPs)
scaffold0010 (266-335)||(155727-155796)
[»] scaffold0004 (2 HSPs)
scaffold0004 (225-332)||(7854-7961)
scaffold0004 (205-335)||(94996-95125)
[»] scaffold0291 (1 HSPs)
scaffold0291 (238-335)||(6851-6948)
[»] scaffold0384 (1 HSPs)
scaffold0384 (203-335)||(5934-6065)
[»] scaffold0376 (1 HSPs)
scaffold0376 (208-336)||(12636-12764)
[»] scaffold0316 (1 HSPs)
scaffold0316 (240-340)||(1625-1725)
[»] scaffold0079 (1 HSPs)
scaffold0079 (219-298)||(8152-8230)
[»] scaffold0086 (1 HSPs)
scaffold0086 (240-328)||(26181-26269)
[»] scaffold0050 (1 HSPs)
scaffold0050 (219-296)||(72610-72686)
[»] scaffold0016 (1 HSPs)
scaffold0016 (246-335)||(8717-8806)
[»] scaffold0005 (1 HSPs)
scaffold0005 (209-322)||(271103-271216)
[»] scaffold0341 (1 HSPs)
scaffold0341 (205-308)||(18595-18698)
[»] scaffold0029 (1 HSPs)
scaffold0029 (205-331)||(41007-41133)


Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 6 - 335
Target Start/End: Original strand, 12635579 - 12635908
Alignment:
Q  6 atgattgaatcctgtacctccttaaaacttctattgtatcccttagctcatcaaccaagctatcaagagagaaatccacaagctaatggtaccaatcccc 105  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12635579 atgattgaatcctgtacctgcttaaaacttctatggtatcccttagctcatcaaccaagctatcaagagagaaatccacaagctaatggtaccaatcccc 12635678  T
Q  106 aagcttaagatttatggacaatggatgtctagtggagaaaggaggctctcaacagtggattgaatcatttatcaattgctggaaaatttgttggagcgtt 205  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12635679 aagcttaagatttatggacaatagatgtctagtggagaaaggaggctctcaacagtggattgaatcatttatcaattgctggaaaatttgttggagcgta 12635778  T
Q  206 ccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacga 305  Q
    || |||||||||||||| ||||||||| ||||||||||| |||| ||||||||| |||  || |||||||||||||| ||||||||||||||| |||| |    
T  12635779 ccggtggcaagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaa 12635878  T
Q  306 gccgaattattcgcccaccattggtgggtc 335  Q
    |||| |||| |||||||| |||||||||||    
T  12635879 gccggattagtcgcccactattggtgggtc 12635908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 30788996 - 30788869
Alignment:
Q  206 ccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacga 305  Q
    |||||||||||  |||| ||||||||||||||||||||| || |||||||||||  ||   ||||||||| |||||  ||||||||||||||| ||||||    
T  30788996 ccagtggcaaggagctccttccaaggatgtatccggggaatatcgggtttgattctcat--ggaacaacgtttggccagtgcgcatgcctctaggcacga 30788899  T
Q  306 gccgaattattcgcccaccattggtgggtc 335  Q
    |||| |||| ||||||||| ||||||||||    
T  30788898 gccggattagtcgcccacctttggtgggtc 30788869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 5253369 - 5253239
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  5253369 tccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 5253270  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  5253269 agccggattaatcgcccacctttggtgggtc 5253239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 8932625 - 8932755
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||||||||||||||||| || |||||| |||| |||  ||||||||| ||||||| ||||||||||||||| ||| |    
T  8932625 tccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatg 8932724  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| || |||||| ||| ||||||    
T  8932725 agccggattaatcacccacctttgatgggtc 8932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 8944091 - 8944221
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||||||||||||||||| || |||||| |||| |||  ||||||||| ||||||| ||||||||||||||| ||| |    
T  8944091 tccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatg 8944190  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| || |||||| ||| ||||||    
T  8944191 agccggattaatcacccacctttgatgggtc 8944221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 21898612 - 21898742
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||   |||||||||||||||  ||||||||||||||| ||| |    
T  21898612 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 21898711  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||| || |||||||    
T  21898712 agccggattagtcgttcacctttagtgggtc 21898742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 6606241 - 6606113
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||| ||||||||| ||||||||||| ||||||||| ||||  ||  ||||||||| ||||||  |||  |||||||||| ||| |||    
T  6606241 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgag 6606142  T
Q  307 ccgaattattcgcccaccattggtgggtc 335  Q
    ||| |||| ||| ||||||||||||||||    
T  6606141 ccggattagtcgtccaccattggtgggtc 6606113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 331
Target Start/End: Original strand, 12606408 - 12606520
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||| | ||||||||||| |||| | || ||||||||  |||||||||| |||||  ||||||||||||||| |||||||||| |||| |||    
T  12606408 gctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcg 12606507  T
Q  319 cccaccattggtg 331  Q
    |||||| ||||||    
T  12606508 cccacctttggtg 12606520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 13036150 - 13036020
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||| |||||| || |||||| ||||| ||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  13036150 tccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatg 13036051  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||  |||| ||| |||| |||||||||||    
T  13036050 agccagattagtcgtccactattggtgggtc 13036020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 19089462 - 19089592
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||| |||||  ||||||| |||||| ||||||| ||| |||| ||||||||| |||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  19089462 tccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacg 19089561  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| | ||| ||||||||||    
T  19089562 agccggattagtcgtctacctttggtgggtc 19089592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 9633708 - 9633641
Alignment:
Q  268 gaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||  ||||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 9633641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 10311615 - 10311480
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||| |||||  |||| ||||||| | ||||||||||| ||||||||| |||   ||| ||||||||||||||||  ||||||||| ||||| |||||    
T  10311615 tccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacg 10311516  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||    |||| |||| ||||||||||||||| ||||    
T  10311515 agttagattagtcgctcaccattggtgggtcgaaaa 10311480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 334
Target Start/End: Original strand, 13468901 - 13469026
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||| ||||||||| ||||||||||| |||| ||||  ||| | |  |||||||||| ||||   |||| |||||||||| |||||||||    
T  13468901 gtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagcc 13469000  T
Q  309 gaattattcgcccaccattggtgggt 334  Q
      |||| |||||||||||||||||||    
T  13469001 agattagtcgcccaccattggtgggt 13469026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 2271447 - 2271318
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||| |||||| ||||||||| ||||  || ||  |||||||||| ||  ||||||||| ||||| |||||    
T  2271447 tccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcagag--aacaacgcttagccagtgcgcatgtctctacgcacg 2271350  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||| ||||| ||| |||||||    
T  2271349 agccggattagtcgtccacctttgatgggtca 2271318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 29333270 - 29333155
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| || |||| ||||||||| ||||||||  |||||||||| |||||  ||||||||||||||| ||| ||||||||| | |||    
T  29333270 gctccttccaaggacgtacccagggaataccgggttcgatttccag-gggaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcg 29333172  T
Q  319 cccaccattggtgggtc 335  Q
     ||||| ||||| ||||    
T  29333171 tccacctttggtaggtc 29333155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 8612120 - 8611989
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| | |   ||||||||||||| |  ||| |||||| |||| ||| |    
T  8612120 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatg 8612021  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    | ||| |||| ||||||||| |||||||||||    
T  8612020 aaccggattagtcgcccacctttggtgggtca 8611989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 335
Target Start/End: Complemental strand, 29444908 - 29444781
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| |||||| || ||| ||||||  ||||||||| |||||| |  ||||||||||||||||  ||||||||||||||| ||| ||||    
T  29444908 agtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagc 29444809  T
Q  308 cgaattattcgcccaccattggtgggtc 335  Q
    || |||| | | ||| | ||||||||||    
T  29444808 cggattagttgtccatctttggtgggtc 29444781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 14107504 - 14107374
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| || |||| |||||| ||||||||| |||| |||   ||||||||||||| |  |||| |||||||||| ||| |    
T  14107504 tccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatg 14107405  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||||||  ||| |||||||    
T  14107404 agccggattagtcgcccattattagtgggtc 14107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 3601109 - 3601178
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||||  |||||||||||| ||  ||||||||| |||| ||| ||||| ||||||||||    
T  3601109 gggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtc 3601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 3588073 - 3587998
Alignment:
Q  223 attccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||| || |||||||| || ||||||||| |||| |||| ||||||||||||||||  |||| ||| ||||||    
T  3588073 attccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctcta 3587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 9179882 - 9179755
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||||||||| ||| || |||| ||||||||| |||| |||  ||||||||| |||| |  ||  |||| |||||| ||| |    
T  9179882 tccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatg 9179783  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||| | |||| ||| ||||| |||||||    
T  9179782 agctggattagtcgtccacctttggtgg 9179755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 14783494 - 14783436
Alignment:
Q  277 ttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||| ||| ||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  14783494 ttggctagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 14783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 9366569 - 9366460
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| |||||||||||||   ||||| || | |||| |||||  |  ||||| ||||||||||  ||||||||||||||| |||||    
T  9366569 tccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcacg 9366470  T
Q  305 agccgaatta 314  Q
    ||||| ||||    
T  9366469 agccggatta 9366460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 19230703 - 19230576
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||  |||| || ||||| || ||||| ||| |||||||||||||||   ||  ||||||||||| |||||    
T  19230703 tccagtggcaaggagctccttccaaggacgtactcgggaat-accggattcgattttcaa-gggaacaacgcttggtcagtatgcatgcctctacgcacg 19230606  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| |||  || |||||||||||    
T  19230605 agccggattagtcgttcatcattggtgggt 19230576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 24672012 - 24671903
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||||| ||||| || || |||||||||  ||| ||| |||||||||| |||| |  ||| ||||||||||| ||||     
T  24672012 tccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgcaca 24671913  T
Q  305 agccgaatta 314  Q
    ||||| ||||    
T  24671912 agccggatta 24671903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 13391311 - 13391367
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccca 322  Q
    |||||||| | |||||  ||||||||||||||| |||||||||| |||| |||||||    
T  13391311 gggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 13391367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 48804646 - 48804776
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||| ||||||||| ||||||  ||||||||||||||| ||| |    
T  48804646 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatg 48804745  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||||||||||||||    
T  48804746 agccggattagtcgtccaccattggtgggtc 48804776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 340
Target Start/End: Original strand, 34659189 - 34659324
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||| ||||||| ||||||| ||||||||| ||||  ||| |||||||||||||| |  ||||||||||||||| |||||    
T  34659189 tccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacg 34659288  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| |||||||||||||||| ||| ||||    
T  34659289 agccggattagtcgcccaccattggtgtgtcgaaaa 34659324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 10048022 - 10047892
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||| ||||||| ||| |    
T  10048022 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatg 10047923  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| |||||| ||| ||||||||||||||||    
T  10047922 agcagaattagtcgtccaccattggtgggtc 10047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 38578994 - 38578883
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||| ||||||| || |||||| |||| |||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||||||||    
T  38578994 ttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 38578895  T
Q  324 cattggtgggtc 335  Q
    | ||||||||||    
T  38578894 ctttggtgggtc 38578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 21530711 - 21530841
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| | ||||| ||| |||||||||| |||  ||||||||| |||||   |||| |||||||||| |||||    
T  21530711 tccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacg 21530810  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||| |||| |||| ||||||||||    
T  21530811 agccgaattaatcgctcacctttggtgggtc 21530841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 47341839 - 47341969
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||||||||| ||| ||||||| ||||| ||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  47341839 tccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 47341938  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| | |||  |||  |||||||||||||||    
T  47341939 agcaggattggtcgttcaccattggtgggtc 47341969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 4195348 - 4195219
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| | ||||||| ||||||||||| ||||| ||| ||||||||   ||||||||  |||||| ||||||||||||||| ||| |    
T  4195348 tccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatg 4195249  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| ||||  || |||||||||||||||    
T  4195248 agccggattagccgtccaccattggtgggt 4195219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 17748509 - 17748398
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||| |||||| ||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| | |||||||| |||| ||| ||||    
T  17748509 ttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccac 17748410  T
Q  324 cattggtgggtc 335  Q
    | ||| ||||||    
T  17748409 ctttgttgggtc 17748398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 5069961 - 5069831
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||| ||||| ||| ||||| | ||||||||| ||||||||   |||||||||||| ||| ||| ||||||||||| ||||     
T  5069961 tccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcaca 5069862  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  5069861 agccggattagtcgcccacctttggtgggtc 5069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 42210408 - 42210278
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||| ||| |||||| || |||| |||  |  ||||||| |||||  ||||||||||||||| |||||    
T  42210408 tccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacg 42210309  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| || |||||| ||||||||||    
T  42210308 agccggattaatcacccaccgttggtgggtc 42210278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 1797423 - 1797527
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||| ||| ||||||||| |||| |||  || |||||||||||||  ||||||||| ||||| |||||    
T  1797423 tccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacg 1797522  T
Q  305 agccg 309  Q
    |||||    
T  1797523 agccg 1797527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 22993513 - 22993382
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| || |||||| |||| | |   |||||||||||||||  ||| ||||||||||| |||||    
T  22993513 tccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacg 22993414  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    | ||| |||| |||| |||| |||||||||||    
T  22993413 aaccggattagtcgctcacctttggtgggtca 22993382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 13095825 - 13095951
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||| || |||||| ||| ||||||| |||||||||  ||| |||  ||||||||| ||||||  ||||||||||||||| ||| |||||    
T  13095825 gtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagcc 13095924  T
Q  309 gaattattcgcccaccattggtgggtc 335  Q
    | |||| |||| |||| ||||||||||    
T  13095925 ggattagtcgctcacctttggtgggtc 13095951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 43346925 - 43346795
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| || ||||| ||||| |||||||||  |||  ||| ||||||||| ||||||  ||||||||||||||| | |||    
T  43346925 tccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacg 43346826  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||| || | ||||||||||    
T  43346825 agccggattagtcgctcatctttggtgggtc 43346795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 332
Target Start/End: Original strand, 1605918 - 1606031
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| |||| || |||| |||| ||||||||  ||||||||||||||||  |||| |||||||||| ||  |||||| |||| |||    
T  1605918 gctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcg 1606017  T
Q  319 cccaccattggtgg 332  Q
    |||||| |||||||    
T  1606018 cccacctttggtgg 1606031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 4228897 - 4228765
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||| ||||||  |||| ||||||||| ||||||| ||| |||| |||| ||||||||   ||||||||| |||||  |||| |||||| ||| ||| |    
T  4228897 tccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttcca---ggaacaacgtttggccagtgcacatgcccctacgcatg 4228801  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||||||||||||| |||||| ||||    
T  4228800 agccggattagtcgcccaccattgatgggtcgaaaa 4228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 18785632 - 18785725
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||||||||| |||| ||||||||| ||| ||||||| ||||||||| |||| | |  ||||||||| ||||||  |||||||||||||||    
T  18785632 tccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctcta 18785725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 21190912 - 21190791
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| |||||||||  |||||||||| ||||||||| |||| | |   ||| |||||||||||| ||||||||||||||| ||||||| |  |||| |||    
T  21190912 gctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcg 21190813  T
Q  319 cccaccattggtgggtcaaaaa 340  Q
    |||| || ||||||||| ||||    
T  21190812 cccatcaatggtgggtcgaaaa 21190791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 340
Target Start/End: Complemental strand, 36619378 - 36619265
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 326  Q
    |||||| ||||  ||||| ||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| ||| |||||| |||| ||| |||||||    
T  36619378 caaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccat 36619279  T
Q  327 tggtgggtcaaaaa 340  Q
    ||||||||||||||    
T  36619278 tggtgggtcaaaaa 36619265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 340
Target Start/End: Original strand, 16802086 - 16802221
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||| ||||||| |||||| || ||||   |   ||||||||| |||||  ||||| ||||||||| |||||    
T  16802086 tccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacg 16802185  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| |||| ||||||||||||||| ||||    
T  16802186 agccggattagtcgctcaccattggtgggtcgaaaa 16802221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 43925475 - 43925577
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  43925475 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatg 43925574  T
Q  305 agc 307  Q
    |||    
T  43925575 agc 43925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 41945482 - 41945562
Alignment:
Q  250 gggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtg 331  Q
    ||||||||||| ||| ||||| ||||||||||  ||||||||||||||| |||||||||| |||| ||| ||||| ||||||    
T  41945482 gggtttgattttcaa-gggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtg 41945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 336
Target Start/End: Original strand, 14535273 - 14535385
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||  | |||| |||||||||| |||| ||  | ||||||| ||||||  ||| ||||||||||| |||||||| | |||| ||||||||    
T  14535273 ttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccac 14535372  T
Q  324 cattggtgggtca 336  Q
    ||||| |||||||    
T  14535373 cattgatgggtca 14535385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 43862104 - 43862009
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 314  Q
    |||| |||||| || ||||| ||||| ||||||||| |||| |||  |||||||||| |||||  ||||||||||||||| ||| |||||| ||||    
T  43862104 gctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatta 43862009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 27028246 - 27028372
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||||||||||| | ||| | ||| | |||| |||| ||||||||  ||||||||| ||||||  |||||||||||||||  || ||||     
T  27028246 gtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagct 27028345  T
Q  309 gaattattcgcccaccattggtgggtc 335  Q
    | |||| |||| |||| ||||||||||    
T  27028346 ggattagtcgctcacctttggtgggtc 27028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 39420804 - 39420909
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| || |||||| ||| ||||||| |||||| || || | |||||||||||||||||||||  |||||| |||||||| ||| ||||    
T  39420804 agtggcaaggagctcctttcaaggaggtacccggggaataccgg-ttcgaatcccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagc 39420902  T
Q  308 cgaatta 314  Q
    || ||||    
T  39420903 cggatta 39420909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 42032059 - 42032189
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||| |||||| |||| ||||||||| ||| ||||||| |||| |||| |||| |||  |||||||||| |||||  |||| ||| | |||| ||| |    
T  42032059 tccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgcatg 42032158  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||| | | ||||| ||| ||||||    
T  42032159 agccgaattagttgtccacctttgatgggtc 42032189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 19914848 - 19914720
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| |   ||| ||| ||||| |||| ||||||| |||||||||||||   |||||||||||||| ||| |    
T  19914848 tccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcccaaagg-aacaacgcttggccaatgcgcatgcctctacgcatg 19914750  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||  |||| ||||||||| ||| |||||    
T  19914749 agccagattaatcgcccacctttgatgggt 19914720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 22973944 - 22974061
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| |||  |||||| ||||||||| ||||  ||  ||||||||||||||||  ||| |||||| |||| ||| |||||  |||| |||    
T  22973944 gctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcg 22974043  T
Q  319 cccaccattggtgggtca 336  Q
     ||||| |||||||||||    
T  22974044 tccacctttggtgggtca 22974061  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 23658193 - 23658273
Alignment:
Q  256 gatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    ||||||||  ||||||||||||||||  ||| |||||||||||  ||||||||| |||| ||| ||| | |||||||||||    
T  23658193 gatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtca 23658273  T

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Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 49142780 - 49142680
Alignment:
Q  240 ggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaa 339  Q
    ||||| ||||||||| |||| | |  ||||||||||||| ||  |||| |||||||||| |||||||||| |||| | ||||||| ||| |||||| |||    
T  49142780 ggggaataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttgatgggtcgaaa 49142681  T
Q  340 a 340  Q
    |    
T  49142680 a 49142680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 24983486 - 24983435
Alignment:
Q  284 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  24983486 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 24983435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 26423433 - 26423330
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||||  ||| ||||||||| ||| ||  ||| ||||||||| |||| |||  || |||||||||||||  |||| | |||||||| |||||    
T  26423433 tccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacg 26423334  T
Q  305 agcc 308  Q
    ||||    
T  26423333 agcc 26423330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 298
Target Start/End: Original strand, 45447931 - 45448026
Alignment:
Q  203 gttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    |||| |||||||||  |||| ||||||||| ||| ||| | | |||| |||| ||||||||  | ||||||||||||||| |||||||| ||||||    
T  45447931 gttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctcta 45448026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 45960148 - 45960030
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||| |||||  |||| ||||||||| ||||| ||||| ||||| |||||||| |||| || |||||| |||||   ||||||||||||||| |||      
T  45960148 tccagtagcaaggagctctttccaaggacgtatc-ggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcata 45960050  T
Q  305 agccgaattattcgcccacc 324  Q
    ||||| |||| |||| ||||    
T  45960049 agccggattagtcgctcacc 45960030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 340
Target Start/End: Original strand, 39474916 - 39475038
Alignment:
Q  219 gctcattccaaggatgtatccggggat-taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattc 317  Q
    |||| |||||| || |||||||||| | ||||||||| |||| | |  |||||||||||||||   |||||||| |||||| ||| |||||| |||| ||    
T  39474916 gctctttccaaagacgtatccgggggtataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtc 39475015  T
Q  318 gcccaccattggtgggtcaaaaa 340  Q
    | ||||| || ||||||| ||||    
T  39475016 gtccacctttagtgggtcgaaaa 39475038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 8734771 - 8734702
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||| ||||||   ||||||||||||| | |||||||||  |||| ||||||||| ||||||||||    
T  8734771 gggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtc 8734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 28396245 - 28396176
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||| ||| |||||||||||| || ||| |||||| |||| ||| | ||| ||||||||||    
T  28396245 gggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtc 28396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 34127696 - 34127656
Alignment:
Q  300 gcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    |||||||||| |||| ||||||||| |||||||||||||||    
T  34127696 gcacgagccggattagtcgcccacctttggtgggtcaaaaa 34127656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 335
Target Start/End: Original strand, 47078421 - 47078553
Alignment:
Q  203 gttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 302  Q
    ||||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||  ||||||||||||||||  |||| |||||||||| |||    
T  47078421 gttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgca 47078520  T
Q  303 cgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||| |||| |||| |||||||||||||||    
T  47078521 cgagccggattagtcgctcaccattggtgggtc 47078553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 5472994 - 5472859
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  ||||||| |||||| ||||||||||| |||| |||||||||  ||  || |||||||||||||  ||||||||||||||| |||||    
T  5472994 tccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacg 5472895  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||||||||| |||||||||| ||||    
T  5472894 agccggattagtcgcccacctttggtgggtcgaaaa 5472859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 29895752 - 29895879
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  29895752 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 29895851  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||||| |||| ||| |||||||||||||    
T  29895852 agccggattagtcgtccaccattggtgg 29895879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 38165992 - 38166122
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||||| ||||||||||| ||| ||||| |||| |||  ||||||||||||||||  ||||||||| ||||| |||||    
T  38165992 tccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacg 38166091  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  38166092 agccggattagtcgcccacctttggtgggtc 38166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 36262911 - 36262782
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||| |||| ||||||||| ||| |||| || ||||||||| |||| |||  ||||||||||||||||  |||| |||||||||| |||||    
T  36262911 tccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattccca--gggaacaacgcttggccagtgcacatgcctctacgcacg 36262814  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    || || |||| ||||||||| |||||||||||    
T  36262813 agtcggattagtcgcccacctttggtgggtca 36262782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 3159596 - 3159485
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||||||| || ||||||||| || |||||  ||||||||||||||||  ||||||||||||||| |||||||||  |||| |||| |||    
T  3159596 ttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcac 3159497  T
Q  324 cattggtgggtc 335  Q
    ||||||||||||    
T  3159496 cattggtgggtc 3159485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 1446791 - 1446911
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  1446791 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 1446890  T
Q  305 agccgaattattcgcccacca 325  Q
    ||||| |||| ||| ||||||    
T  1446891 agccggattagtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 49260792 - 49260681
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||||||||||||||| ||| |  ||  ||| |||| ||||||||||||||||  ||||||||||||||| |||||||||| |||| ||| ||||    
T  49260792 ttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccac 49260693  T
Q  324 cattggtgggtc 335  Q
    | ||||||||||    
T  49260692 ctttggtgggtc 49260681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 1940917 - 1940788
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||| ||||| | || |||||| |||| |||  |||||||||||||||   ||||||||||||||| ||||||||    
T  1940917 agtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagc 1940821  T
Q  308 cgaattattcgcccaccattggtgggtcaaaaa 340  Q
    || |||| ||||||||| |||||||||| ||||    
T  1940820 cggattagtcgcccacctttggtgggtcgaaaa 1940788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 7246773 - 7246662
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||| ||||||| ||| ||||| |||| | |  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||||||||    
T  7246773 ttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 7246674  T
Q  324 cattggtgggtc 335  Q
    | ||||||||||    
T  7246673 ctttggtgggtc 7246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 20532555 - 20532428
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||| ||||||||||||||   || |||| || ||||| ||| ||||||||   |||||||||||||||  ||||||||||||||| ||| |    
T  20532555 tccagtggcaaggtgctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 20532456  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||||| || | ||||||||| |||||||    
T  20532455 agccggataagtcgcccacctttggtgg 20532428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 41163028 - 41162909
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| ||||||||| ||||||||| | ||||| ||| |||||||| |||||||||| ||||||  |||  ||||| |||||||| |    
T  41163028 tccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatg 41162929  T
Q  305 agccgaattattcgcccacc 324  Q
    |||||||||| |||||||||    
T  41162928 agccgaattagtcgcccacc 41162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 29588701 - 29588831
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  ||||||||||| || ||  ||||| | ||||||||| |||| |||  || ||||| |||||||| ||||||||||||||| |||||    
T  29588701 tccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacg 29588800  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |   ||||||||||||||||    
T  29588801 agccggattagttatccaccattggtgggtc 29588831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 329
Target Start/End: Complemental strand, 41339538 - 41339417
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||| |||| || ||||||||| || | |||| ||||||||||||||||  ||| | ||||||||| |||||||     
T  41339538 agtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgaga 41339439  T
Q  308 cgaattattcgcccaccattgg 329  Q
    || |||| ||||||||||||||    
T  41339438 cggattagtcgcccaccattgg 41339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 40272463 - 40272347
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| |||||| |||||||||||||| || |||||| ||||||||  ||||||||||||||||  ||||||||||||||| |||  || || |||  |||    
T  40272463 gctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcg 40272364  T
Q  319 cccaccattggtgggtc 335  Q
      |||||||||||||||    
T  40272363 ttcaccattggtgggtc 40272347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 2559272 - 2559402
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||| | ||||| |||||| || |||||| |   |||||||||||||||  ||||||||||||||| ||||     
T  2559272 tccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcaca 2559371  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  2559372 agccggattactcgtccacctttggtgggtc 2559402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 3507245 - 3507362
Alignment:
Q  214 aagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatt 313  Q
    |||| |||| || |||| |||||||||| || || |||||| |||| |||| ||||||||||||||||| |||||| ||||||||  ||||||||| |||    
T  3507245 aagaagctcctttcaagaatgtatccggagaatatcgggttcgattcccaa-gggaacaacgcttggctagtgcgcgtgcctctacacacgagccggatt 3507343  T
Q  314 attcgcccaccattggtgg 332  Q
    | ||| ||||| |||||||    
T  3507344 agtcgtccacctttggtgg 3507362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 30317258 - 30317328
Alignment:
Q  265 agggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||||||||  || || ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  30317258 agggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtc 30317328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 55920999 - 55921129
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| | | ||||||| ||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| | | |    
T  55920999 tccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatg 55921098  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||| |||| ||||||||||    
T  55921099 agccggattaatcgctcacctttggtgggtc 55921129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 336
Target Start/End: Original strand, 20128293 - 20128405
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||||||||||| ||| ||||| ||||  ||  |||||||| |||||||  |||||||||||| || ||||||||   |||| ||| ||||    
T  20128293 ttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccac 20128392  T
Q  324 cattggtgggtca 336  Q
    |||||||||||||    
T  20128393 cattggtgggtca 20128405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 24166415 - 24166518
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||  |||||| ||| ||||| |||| |||| || ||||||| |||||  ||||||||||||||| |||||    
T  24166415 tccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacg 24166514  T
Q  305 agcc 308  Q
    ||||    
T  24166515 agcc 24166518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 38075417 - 38075528
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||| ||| || ||||||||| ||||  ||  || |||||||||||||  ||||||||||||||| ||| ||||||||||| | | ||||    
T  38075417 ttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccac 38075516  T
Q  324 cattggtgggtc 335  Q
    | ||||||||||    
T  38075517 ctttggtgggtc 38075528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 43458578 - 43458697
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||| |||||||||||||| ||||  ||||| ||| || || |||| |||   |||| ||||||||||  ||||||||||||||| | |||    
T  43458578 tccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacg 43458677  T
Q  305 agccgaattattcgcccacc 324  Q
    ||||| |||| ||| |||||    
T  43458678 agccggattagtcgtccacc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 43468331 - 43468442
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||| | ||| ||||||| ||||||||| |||| |||  ||||||||||||||||  |||| |||  ||||| ||| |||||| |||| ||||||||    
T  43468331 ttccaagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccac 43468430  T
Q  324 cattggtgggtc 335  Q
    || |||||||||    
T  43468431 cagtggtgggtc 43468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 6779176 - 6779302
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||||||||| ||| | || || ||||||||| |||| |||  ||||||||| | ||||  ||||||||||||||||||| |    
T  6779176 tccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatg 6779275  T
Q  305 agccgaattattcgcccaccattggtg 331  Q
    ||||| |||| ||| ||||| ||||||    
T  6779276 agccggattagtcgtccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 42722498 - 42722390
Alignment:
Q  231 gatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggt 330  Q
    |||||| ||||||| |||||||||||| |||| | ||||||||| |||| |  |||||||| |||||||||| ||| || |||| ||| |||||| ||||    
T  42722498 gatgtacccggggaataccgggtttga-ttcccaggggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtccaccaatggt 42722400  T
Q  331 gggtcaaaaa 340  Q
    ||||| ||||    
T  42722399 gggtcgaaaa 42722390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 53599025 - 53599134
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||   ||||||||| |||||  ||||||||||||||| ||| |    
T  53599025 tccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatg 53599124  T
Q  305 agccgaatta 314  Q
    ||||| ||||    
T  53599125 agccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 8424582 - 8424654
Alignment:
Q  268 gaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    |||||||| |||||  ||||||||||||||||||||||||| ||||| |||| || | |||||||||| ||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcgaaaa 8424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 8889001 - 8889117
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||| ||||| ||||||||||| ||||||||| |||| | |  ||||||||| |||||   ||||||||| ||||| ||| |||||| |||| |||    
T  8889001 gctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcg 8889100  T
Q  319 cccaccattggtgggtc 335  Q
     ||||| ||||||||||    
T  8889101 tccacctttggtgggtc 8889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 27248393 - 27248522
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||||||||||| ||||||||| || | |||   |||||||||||||||    ||||||||||||| ||| |    
T  27248393 tccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggc--cagcgcatgcctctacgcagg 27248490  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||  |||| ||||||||| ||||| |||||    
T  27248491 agccagattagtcgcccacctttggtaggtca 27248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 36145357 - 36145242
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||||||||||||| ||| ||||||| ||||||||| |||| |||  || |||||||||||    |||||||||||||||  || |||||    
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagcc 36145258  T
Q  309 gaattattcgcccacc 324  Q
    | |||| ||| |||||    
T  36145257 ggattagtcgtccacc 36145242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 20354643 - 20354725
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 328  Q
    ||||| ||||||||||||  | ||||||||||||||| ||||||||||||||| ||| ||| || |||| ||| |||| ||||    
T  20354643 taccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccactattg 20354725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 40780963 - 40780877
Alignment:
Q  249 cgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||| ||||  ||| |||||||||||||||   ||||||||||||||| ||| |||||| |||| ||| ||||| ||||||||||    
T  40780963 cgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 40780877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 48015200 - 48015110
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 314  Q
    |||||| || ||| ||| ||| ||||||||| |||| |||  ||||||||||||||||  ||||||| ||||||| |||||||||| ||||    
T  48015200 ttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggatta 48015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 14123981 - 14124110
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||| |||| ||||||| | |||   | ||| |||| |||| |||| |||  |||||||||  |||||  |||||||||||||||  ||||    
T  14123981 tccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacg 14124080  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| |||| ||||||||||||||    
T  14124081 agccggattagtcgctcaccattggtgggt 14124110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 42722709 - 42722588
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| ||||| | |||||||||  ||| |||   |||||||||||||||  ||||||||||||||| ||| |||||| |||| |||    
T  42722709 gctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 42722610  T
Q  319 cccaccattggtgggtcaaaaa 340  Q
      |||| || ||||||| ||||    
T  42722609 ttcacctttagtgggtcgaaaa 42722588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 50485990 - 50486038
Alignment:
Q  287 cgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||| |||||||||| |||| |||||||||||| |||||||    
T  50485990 cgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtc 50486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 52950050 - 52950177
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||| | ||||| || |||||| |||| |||  ||||||||||||||||  ||||||||| |||||  || || |    
T  52950050 agtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaac 52950149  T
Q  308 cgaattattcgcccaccattggtgggtc 335  Q
    |  |||| ||| ||||| ||||||||||    
T  52950150 cagattagtcgtccacctttggtgggtc 52950177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 295655 - 295550
Alignment:
Q  228 aaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 327  Q
    ||||| ||||||||||| |||| | || |||| ||| ||| ||||||| |||||  ||||||||||||||| |||||| ||  |||| ||| ||||| ||    
T  295655 aaggacgtatccggggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgtt 295557  T
Q  328 ggtgggt 334  Q
    |||||||    
T  295556 ggtgggt 295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 4736562 - 4736692
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| || |||||||||| ||| ||| |||||||||  |||  ||  || ||||||| |||||   || ||||||||||| | ||     
T  4736562 tccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtaca 4736661  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||| ||||||||| ||||||||||    
T  4736662 agccgaattagtcgcccaccgttggtgggtc 4736692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 17080069 - 17080127
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    ||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||| ||||    
T  17080069 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacc 17080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 33647689 - 33647786
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacga 305  Q
    |||||||||  |||| || |||||| ||||| ||||| ||||||||| ||||||||  | |||||||||||| |  |||| ||| |||||| ||||||    
T  33647689 agtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacga 33647786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 4738645 - 4738713
Alignment:
Q  267 ggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||| ||  ||||||||| ||||| ||| |||| |||||| ||| ||||| ||||||||||    
T  4738645 ggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtc 4738713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 20421784 - 20421868
Alignment:
Q  251 ggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||| ||||||||  ||||||||| ||||||  ||||||||||||||| ||| |||||  |||| ||| ||| ||||| ||||||    
T  20421784 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtc 20421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 38168227 - 38168330
Alignment:
Q  210 tggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 309  Q
    |||||||  |||| ||||||||| ||| ||||||| |||| |||| |||| | ||  |||||||||||||||  |||| |||||||||| ||| ||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccg 38168325  T
Q  310 aatta 314  Q
     ||||    
T  38168326 gatta 38168330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 54946296 - 54946344
Alignment:
Q  287 cgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||| ||| |||||| |||| ||||||| ||||||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtc 54946344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 6358297 - 6358162
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||| |||||||| ||||| ||||||||||| |||| | || ||||||||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  6358297 tccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatg 6358198  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||| |||||||||||||||| ||||    
T  6358197 agccggattagtcgtccaccattggtgggtcgaaaa 6358162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 25540550 - 25540420
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||||||||| ||||| ||||| ||| ||||| |||| | |  ||||||||||||||||  ||||||||||||||| |||||    
T  25540550 tccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacg 25540451  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  25540450 agccggattagtcgtccacctttggtgggtc 25540420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 3644033 - 3643905
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||| |||  |||||||||||||| ||||||||||| |||||||||||||||| |   |||||||||||||||  ||||||||||||||| ||| |    
T  3644033 tccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatg 3643934  T
Q  305 agccgaattattcgcccaccattggtggg 333  Q
    ||| | |||| ||| ||||| ||||||||    
T  3643933 agctggattagtcgtccacctttggtggg 3643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 10823034 - 10823150
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| ||||||| |||||||||||||| |||   |||||||||||||||  ||||||||||||||| |||||||||| |||| |||    
T  10823034 gctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 10823133  T
Q  319 cccaccattggtgggtc 335  Q
    |||||| || |||||||    
T  10823134 cccaccttttgtgggtc 10823150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 38005362 - 38005489
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||| ||||| |||| |||| ||||||||||||||||  |||||||||||||||  || |    
T  38005362 tccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatg 38005461  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||||| |||| ||||||||| |||||||    
T  38005462 agccggattagtcgcccacctttggtgg 38005489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 44139463 - 44139574
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||||| ||| ||||| ||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| |||||||||| |||| ||||||||    
T  44139463 ttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccac 44139562  T
Q  324 cattggtgggtc 335  Q
    || |||||||||    
T  44139563 caatggtgggtc 44139574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 45263813 - 45263678
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||  || |||||||||| ||||||||| |||| ||| |||||||||||||||||  ||||||||||||||| |||||    
T  45263813 tccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacg 45263714  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| |||| || | |||||||||| ||||    
T  45263713 agccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 38962723 - 38962854
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||| |||  ||||||| |||||| ||||||||||| ||||||||| ||||| ||   |||||||||||||||  ||||||||||||||| ||| |    
T  38962723 tccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 38962822  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    | ||| |||| ||| ||||| |||||||||||    
T  38962823 aaccggattagtcgtccacctttggtgggtca 38962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 41220594 - 41220725
Alignment:
Q  204 ttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 303  Q
    |||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||   |||||||||||||||  ||||||||||||||| |||     
T  41220594 ttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 41220693  T
Q  304 gagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||| |||  |||| || |||||||    
T  41220694 gagccgaattagtcgttcacctttagtgggtc 41220725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 34356166 - 34356296
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||||||||| ||||| ||||| ||||||||| ||||||||  ||||||||| |||||   ||||||||||||||||||| |    
T  34356166 tccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatg 34356265  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||||||| ||||||    
T  34356266 agccggattaatcgtgcaccattgatgggtc 34356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 331461 - 331590
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||| ||||||| ||||||||| |||| |||  ||||||||| ||||||  |||||||||| |||| ||| |    
T  331461 tccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatg 331560  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| ||||||||| |||||||||    
T  331561 agccggattagtcgcccacctttggtgggt 331590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 333
Target Start/End: Complemental strand, 9360879 - 9360766
Alignment:
Q  220 ctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgc 319  Q
    ||||||||||||| ||| ||||||| |||| |||| |||| | | ||| ||||||| |||||  ||||||||||||||| ||||||||||||||| ||||    
T  9360879 ctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgc 9360780  T
Q  320 ccaccattggtggg 333  Q
    ||||| || |||||    
T  9360779 ccacctttagtggg 9360766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 12455303 - 12455400
Alignment:
Q  238 ccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||| ||||||||| ||||||||  || |||||||||| ||  ||||||||||||||| |||||||||| |||| |||| |||||||||||||||    
T  12455303 ccggggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtc 12455400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 20612682 - 20612550
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaa-agggaacaacgcttggcttgtgcgcatgcctctatgcac 303  Q
    ||||||||||||  |||| |||||||| ||||| |||||| ||||||||| ||||  ||  |||||||||| ||||||  |||||||||||||||||||     
T  20612682 tccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcat 20612583  T
Q  304 gagcc-gaattattcgcccaccattggtgggtc 335  Q
    ||||| | |||| ||| ||||||||||||||||    
T  20612582 gagccgggattagtcgtccaccattggtgggtc 20612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 35946713 - 35946828
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||||||| ||||| ||||||||||| ||||| ||| |||| || | ||||||||||||||||   || ||||||||||| |||||||||| |||| |||    
T  35946713 gctcattctaaggacgtatccggggaataccgagttcgatt-cctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T
Q  319 cccaccattggtgggtc 335  Q
     ||||||||||||||||    
T  35946812 tccaccattggtgggtc 35946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 8410091 - 8410209
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| |||| || || |||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  8410091 tccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 8410190  T
Q  305 agccgaattattcgcccac 323  Q
    ||||| |||| ||||||||    
T  8410191 agccggattagtcgcccac 8410209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 18902676 - 18902546
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||  |||||| ||||||||| |||| |||  |||||||||||||| |  |||||| || ||||| |||||    
T  18902676 tccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacg 18902577  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||  |||| ||||||||| ||||||||||    
T  18902576 agccagattagtcgcccacctttggtgggtc 18902546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 21286404 - 21286533
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||   | ||||||||||| |  ||||||||||||||| |||||    
T  21286404 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgcacg 21286503  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||| | |||| || | || |||||||||||    
T  21286504 agctggattagtcactcatcattggtgggt 21286533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 11069852 - 11069968
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||||||||||||| ||| ||||||| |||| |||| |||| | |  |||||||||| |||||  |||||||| |||||| |||||||| |||||| |||    
T  11069852 gctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcg 11069951  T
Q  319 cccaccattggtgggtc 335  Q
     ||||| ||||||||||    
T  11069952 tccaccgttggtgggtc 11069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 324
Target Start/End: Original strand, 44945557 - 44945672
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| |||  ||| || ||| |||||||||| ||| ||| |||||||||||| | ||||||||||||||| ||||||||    
T  44945557 agtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagagg-aacaacgcttggatagtgcgcatgcctctacgcacgagc 44945655  T
Q  308 cgaattattcgcccacc 324  Q
    || |||| |||||||||    
T  44945656 cggattagtcgcccacc 44945672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 340
Target Start/End: Original strand, 37560133 - 37560268
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||| |||| |||| ||||||||| ||| ||| ||| |||| |||| ||||  ||| |||||||||| ||||   ||||||||||||||| |||||    
T  37560133 tccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacg 37560232  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||| ||||| ||| |||||| ||||    
T  37560233 agccggattaatcgtccacctttgatgggtcgaaaa 37560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 39807031 - 39806904
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||||||||| || |||||| ||| ||||||| ||||||||| |||| ||||  | ||||||| |||||  |||||||||||||||  ||||    
T  39807031 tccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacg 39806932  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    || || |||| ||  ||||| |||||||    
T  39806931 agtcggattagtcatccacctttggtgg 39806904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 42770797 - 42770662
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||||||| | | |||||||||  |||  ||  ||||||||||||||||  ||||||||||||||  |||||    
T  42770797 tccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacg 42770698  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||| ||||| |||||||||| ||||    
T  42770697 agccggattaatcgtccacctttggtgggtcgaaaa 42770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 22593095 - 22593224
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||| | ||| |||| |||  |||||||||| |||||  ||||||||||||||| ||| |    
T  22593095 tccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatg 22593193  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  22593194 agccggattagtcgtccacctttggtgggtc 22593224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 41032051 - 41031922
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| || ||||  |||||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  41032051 tccagtggcaaggagctccttccaaggacgta-ccagggaacaccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacg 41031953  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| || |||||| ||||||||||    
T  41031952 agccggattagtcacccacctttggtgggtc 41031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 332
Target Start/End: Original strand, 7787040 - 7787143
Alignment:
Q  229 aggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 328  Q
    |||| ||| ||||||| ||||||||| ||||||||  ||||||||  ||||||  || |||||||||||| |||||||||| |||| ||||||| | |||    
T  7787040 aggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttg 7787139  T
Q  329 gtgg 332  Q
    ||||    
T  7787140 gtgg 7787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 19976953 - 19976834
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| ||||| ||  ||||| |||| ||||   ||||||||| ||||| |||      
T  19976953 tccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcata 19976854  T
Q  305 agccgaattattcgcccacc 324  Q
    || ||||||| |||||||||    
T  19976853 agtcgaattagtcgcccacc 19976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 7747234 - 7747364
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| | |   ||||||||| |||||  ||| ||||||||||| ||| |    
T  7747234 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatg 7747333  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||| || |||||||    
T  7747334 agccggattagtcgttcacctttagtgggtc 7747364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 12864184 - 12864314
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| |||||| || |||| |||||| |||||| || ||||||||  ||||||||| |||||   ||||||||||||||  ||| |    
T  12864184 tccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatg 12864283  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||  |||| ||| ||||||||||||||||    
T  12864284 agccagattagtcgtccaccattggtgggtc 12864314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 2550828 - 2550957
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||||| ||||||||||| || |||||| |||| |||   |||||||| ||| ||  ||||||||| ||||| ||| |    
T  2550828 tccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatg 2550927  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| ||||||||  |||||||||    
T  2550928 agccggattagtcgcccacttttggtgggt 2550957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 3811818 - 3811706
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||  || ||| || |||||| |||| ||| |||||||||| |||||    |||||||||||||| ||| |||||| |||| ||||||||    
T  3811818 ttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccac 3811719  T
Q  324 cattggtgggtca 336  Q
    | |||||||||||    
T  3811718 ctttggtgggtca 3811706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 15079462 - 15079558
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcc 320  Q
    ||||||||| ||| ||||||| ||| ||||| ||||||||  |||||||||||||| |  ||| ||||| ||||| ||||||||| ||||| |||||    
T  15079462 ttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagccaaattagtcgcc 15079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 27725962 - 27726030
Alignment:
Q  267 ggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||| |||||||  ||||||||||||||| |||| ||||| |||| |||||||||| |||||||||    
T  27725962 ggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtc 27726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 10669571 - 10669682
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||| | ||||  |||||||||||||| |||  | ||||||||||||||  ||||||||| ||||| ||||||| || |||| |||  |||    
T  10669571 ttccaaggacgtacctgggggctaccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcac 10669670  T
Q  324 cattggtgggtc 335  Q
    | ||||||||||    
T  10669671 ctttggtgggtc 10669682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 43303394 - 43303307
Alignment:
Q  249 cgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    |||||| ||||| ||| |||||||||||||| |  || ||||||||||||||||||||| | |||| ||||||| || || |||||||    
T  43303394 cgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggattaatcgcccatcaatgatgggtca 43303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 10026762 - 10026632
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||||| |||  |||  | ||||||||| ||||  ||  |||||||||| |||||  ||||||||||||||| ||| |    
T  10026762 tccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatg 10026663  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  10026662 agccggattagtcgaccacctttggtgggtc 10026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 10046622 - 10046493
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||| | |||||||| || ||||||||| ||||  ||| || ||||||| ||| |  ||||||||||||||| ||| |    
T  10046622 tccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgaca-gtgcgcatgcctctacgcatg 10046524  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  10046523 agccggattagtcgaccacctttggtgggtc 10046493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 16034916 - 16035020
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||||||| ||| ||||||||| ||||| ||   ||||||||||||| |  ||| |||||||| || | |||||||| |||| |||| |||    
T  16034916 ttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcac 16035015  T
Q  324 cattg 328  Q
    |||||    
T  16035016 cattg 16035020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 29653651 - 29653714
Alignment:
Q  269 aacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtggg 333  Q
    ||||||||||||   ||||||||||||||| ||||||||||||||| ||| ||||| ||||||||    
T  29653651 aacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtggg 29653714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 34346419 - 34346303
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||||||||||||| ||| | ||||| ||| ||||||||||  ||  ||||||||| ||||||  ||| ||||||||||| ||| ||| |  |||| |||    
T  34346419 gctcattccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcg 34346320  T
Q  319 cccaccattggtgggtc 335  Q
    | |||| ||||||||||    
T  34346319 ctcacctttggtgggtc 34346303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 21641990 - 21642045
Alignment:
Q  285 tgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    |||||||||||||| ||| ||||||||||| |||||| || |||||||||| ||||    
T  21641990 tgcgcatgcctctacgcatgagccgaattaatcgcccgcctttggtgggtcgaaaa 21642045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 21180460 - 21180346
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| |||  || |||||| || |||| |||  | ||||||| ||||||  |||| |||||||||| |||||    
T  21180460 tccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacg 21180361  T
Q  305 agccgaattattcgc 319  Q
    ||||| |||| ||||    
T  21180360 agccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 16325616 - 16325685
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| ||||||  ||| ||||||||||| ||| |||||  |||| ||| ||||||||||||||||    
T  16325616 gggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtc 16325685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 28616506 - 28616394
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    |||||||||  |||||| ||| || |||||| ||||| ||  ||||| ||| |||||   ||||||||||||||| |||||||||  |||| |||||||     
T  28616506 ttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccat 28616407  T
Q  324 cattggtgggtca 336  Q
    | || ||||||||    
T  28616406 ctttagtgggtca 28616394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 319385 - 319513
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| |||||||||||||||| |  ||||||||||||||||  |||||||| |||||||||| |    
T  319385 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatg 319484  T
Q  305 agccgaattattcgcccaccattggtggg 333  Q
    ||| | |||| ||| ||||| ||||||||    
T  319485 agctggattagtcgtccacctttggtggg 319513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 139427 - 139491
Alignment:
Q  234 gtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||| ||||| || |||||| |||| ||||| |||||||||||||||  |||| ||||||||||    
T  139427 gtatctggggaatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 9808 - 9939
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| ||||||||||||||| | ||| |||||| || ||||||||  ||||||||||||||||  ||||||||||||||| |||||    
T  9808 tccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacg 9907  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||| ||||| |||||||||||    
T  9908 agccggattagtcgtccacctttggtgggtca 9939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 2467264 - 2467138
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| ||||||||  ||||||||| ||||||  ||||||||| ||||||||| |    
T  2467264 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatg 2467165  T
Q  305 agccgaattattcgcccaccattggtg 331  Q
    ||||| |||| ||| |||| |||||||    
T  2467164 agccggattagtcgtccacaattggtg 2467138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 14666217 - 14666082
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||||||||| ||||||||||| ||||||||| |||| |||  || |||||| ||||||  ||||||||||||||| ||||     
T  14666217 tccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcaca 14666118  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||  |||| ||||||||  |||||||||| ||||    
T  14666117 agccagattagtcgcccacagttggtgggtcgaaaa 14666082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 8141066 - 8141197
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||||||||| |||| |||||| ||||||||| ||||||||  || |||||||||||||  ||||||||||||||| ||| |    
T  8141066 tccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatg 8141165  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||| |||||| ||| ||||  |||||||||||    
T  8141166 agctgaattagtcgtccacatttggtgggtca 8141197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 38922560 - 38922457
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| ||| |||||||||||||||||  |||||||||||| || |||||    
T  38922560 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgcacg 38922461  T
Q  305 agcc 308  Q
    ||||    
T  38922460 agcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 15884701 - 15884572
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||| |||  |||| ||||||||| ||| | ||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  15884701 tccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccag-gggaacaacacttggcaagtgcgcatgcctctacgcacg 15884603  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  15884602 agccggattagtcgcccacctttggtgggtc 15884572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 6042818 - 6042916
Alignment:
Q  238 ccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||  ||||||||||||  | ||| |||||| |||| |||||||||| ||||||||||    
T  6042818 ccggggaataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtca 6042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 44893424 - 44893294
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| |||||||||  ||||| |  |||||||| |||||||  ||| ||||||||||| |||||    
T  44893424 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacg 44893325  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||| |||| ||| ||||||    
T  44893324 agccggattaatcgctcacccttgatgggtc 44893294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 1013123 - 1013014
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||||||||| ||||||||||| ||||||||| |||| |||  ||||||||||||||||  || | |||||||||| ||| |    
T  1013123 tccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatg 1013024  T
Q  305 agccgaatta 314  Q
    ||||||||||    
T  1013023 agccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 43032865 - 43032996
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||  ||||||| ||| | || ||| || |||| |||  ||||||||||||||||  |||||||||||||||  ||||    
T  43032865 tccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacg 43032964  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||||||||| |||||||||||    
T  43032965 agccggattagtcgcccacctttggtgggtca 43032996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 17981405 - 17981531
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||||||| ||||| | ||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| |||||    
T  17981405 tccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacg 17981504  T
Q  305 agccgaattattcgcccaccattggtg 331  Q
    || ||||||| | ||||| | ||||||    
T  17981505 agtcgaattagttgcccagctttggtg 17981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 45521133 - 45521262
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | |||||||||||||||| ||||||| ||||||||| || |||| | ||||||||| ||||    ||||||||||||||| ||| |    
T  45521133 tccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcga-ttcccaggggaacaacacttgatcagtgcgcatgcctctacgcatg 45521231  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||| |||| ||| ||||||    
T  45521232 agccggattagtcgctcacctttgatgggtc 45521262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 6100438 - 6100571
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||| || |||||| ||||||||||| ||||||||| |||| |||   |||||||||||||||  ||||||||||| ||| ||| |||    
T  6100438 cagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgag 6100537  T
Q  307 ccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||| |||| |||  |||| || ||||||| ||||    
T  6100538 ccggattagtcgttcacctttagtgggtcgaaaa 6100571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 13085488 - 13085605
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||| ||  |||| ||||||||| ||||||||||| ||||||||| ||||  || ||||||||||| || ||  ||| |||| |||||| |||||    
T  13085488 tccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacg 13085587  T
Q  305 agccgaattattcgccca 322  Q
    ||||  |||| |||||||    
T  13085588 agccagattaatcgccca 13085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 2964043 - 2964171
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||| | ||| ||||||| ||||| ||| |||| | |   |||||||||||||||   || ||||||||||| |||||| |    
T  2964043 agtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaac 2964142  T
Q  308 cgaattattcgcccaccattggtgggtca 336  Q
    || |||| ||||||||| |||||||||||    
T  2964143 cggattagtcgcccacctttggtgggtca 2964171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 9860142 - 9860014
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccgggg-attaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 303  Q
    |||||||||||   |||| ||||||||| |||||||||| | ||||||||| |||| |||  ||||||||| ||||||  ||| |||||||||||  ||     
T  9860142 tccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacat 9860043  T
Q  304 gagccgaattattcgcccaccattggtgg 332  Q
    |||||  |||| ||| |||||||||||||    
T  9860042 gagccagattagtcgtccaccattggtgg 9860014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 340
Target Start/End: Original strand, 18373974 - 18374109
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  ||||||||||| ||| |||||||| | |||| |||| ||||  ||  | |||||||||||| |  ||||||||||||||| ||| |    
T  18373974 tccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatg 18374073  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||| |||| ||| ||| | |||||||||| ||||    
T  18374074 agccggattagtcgtccaactttggtgggtcgaaaa 18374109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 24837206 - 24837333
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||| | ||| ||||||| ||||| ||| |||| |||  | ||||||||||||||  |||  |||||||||| |||||    
T  24837206 tccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacg 24837305  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||| | |||| ||| ||||| |||||||    
T  24837306 agcaggattagtcgtccacctttggtgg 24837333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 6940522 - 6940608
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcat 291  Q
    |||||||| |||  |||||||||||||| ||||||||  | || |||||| ||||||||   |||||||||||||||| ||||||||    
T  6940522 tccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat 6940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 11298353 - 11298283
Alignment:
Q  265 agggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||| ||| ||  ||||||||||||||||||| ||||| ||||| |||| |||| ||||||||||    
T  11298353 agggaacaacacttagccagtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtc 11298283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 33401945 - 33401811
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||||| |||  |||||| ||||||||| ||||| ||  ||||||||| |||| |  ||| ||||||||||| ||| |    
T  33401945 tccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatg 33401846  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaa 339  Q
    || || |||| ||||||||| || |||| ||||||    
T  33401845 agtcggattagtcgcccacctttagtggatcaaaa 33401811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 4479381 - 4479312
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||||  ||||||||||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  4479381 gggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtc 4479312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 7673742 - 7673686
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccca 322  Q
    |||||||||| |||||| ||| ||||||||||| |||||||||| ||| ||||||||    
T  7673742 gggaacaacgtttggctagtgtgcatgcctctacgcacgagccggatttttcgccca 7673686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 10927592 - 10927700
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 326  Q
    |||||| ||| ||||||| ||||||||| |||| | |   |||||||||||||||  ||||||||||||||| ||| |||||| |||| |||  |||| |    
T  10927592 caaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctt 10927691  T
Q  327 tggtgggtc 335  Q
    | |||||||    
T  10927692 tagtgggtc 10927700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 34846778 - 34846880
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||||||||| ||| || |||| ||||||||| |||| |||  | ||||||||||||||  ||  ||||||||||| ||||     
T  34846778 tccagtggcaaggagctcattccaaggacgta-cccgggaataccgggttcgattcccatggtgaacaacgcttggccagtatgcatgcctctacgcaca 34846876  T
Q  305 agcc 308  Q
    ||||    
T  34846877 agcc 34846880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 44031567 - 44031464
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggc-----ttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    ||||||||||||| ||||| | || |||||| ||||||||  ||||||||||||||||     | ||| ||||||||||  |||||||||| |||| |||    
T  44031567 ttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtgtgcatgcctctgcgcacgagccggattagtcg 44031468  T
Q  319 ccca 322  Q
    ||||    
T  44031467 ccca 44031464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 18091443 - 18091483
Alignment:
Q  284 gtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  18091443 gtgcgcatgcctctacgcacgaggcgaattagtcgcccacc 18091483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 19572685 - 19572814
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  19572685 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 19572784  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| |||  ||||||||||||||    
T  19572785 agccggattagtcgttcaccattggtgggt 19572814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 1538392 - 1538522
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||| |||| |||| |||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  1538392 tccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 1538491  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||||||||||||||    
T  1538492 agccggattaatcgtccaccattggtgggtc 1538522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 42861364 - 42861234
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  ||||||||||||||  |||||||||| || ||||||  |||||| | || |||||| ||||||  ||||||||||||||| ||| |    
T  42861364 tccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgcatgcctctacgcatg 42861265  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||||||||||||||    
T  42861264 agccggattaatcgtccaccattggtgggtc 42861234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 30349540 - 30349668
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||||| ||||||||||| |||||||||||||||| |  |||||||| | |||||  ||||||||||||||||||| |    
T  30349540 tccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatg 30349639  T
Q  305 agccgaattattcgcccaccattggtggg 333  Q
    ||| |||||| ||| ||||| | ||||||    
T  30349640 agctgaattagtcgtccaccttaggtggg 30349668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 332
Target Start/End: Complemental strand, 38897861 - 38897738
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| || |||||| ||||  ||||| ||||||||| ||||||||  ||||||||||||||||  ||||||||||||||| ||||||||    
T  38897861 agtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccag-gggaacaacgcttggccagtgcgcatgcctctacgcacgagc 38897763  T
Q  308 cgaattattcgcccaccattggtgg 332  Q
    || |||| | ||||||| |||||||    
T  38897762 cggattagttgcccacctttggtgg 38897738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 20525799 - 20525926
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||||||||||||||||| || |||||| |||| |||   |||||||| ||| ||  ||||||||||||||| ||| |    
T  20525799 tccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatg 20525898  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||||| |||| ||| |||||||||||||    
T  20525899 agccggattagtcgtccaccattggtgg 20525926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 25417329 - 25417198
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||  |||||| ||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| | |||    
T  25417329 tccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacg 25417230  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||    |||||||||||||||    
T  25417229 agccggattagtcatttaccattggtgggtca 25417198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 42086292 - 42086418
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||| ||||||||| ||| ||| ||| ||||||||| |||| |||  |||||||||||||| |  ||||||||||||||| ||| |||||    
T  42086292 gtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagcc 42086391  T
Q  309 gaattattcgcccaccattggtgggtc 335  Q
    | |||| ||| ||||| ||||||||||    
T  42086392 ggattagtcgtccacctttggtgggtc 42086418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 7866542 - 7866671
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||| ||| ||||||||| |||| | |   |||||||||||||||  ||| ||||||||||| |||||    
T  7866542 tccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacg 7866641  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    | ||| |||| ||||||||| |||||||||    
T  7866642 aaccggattagtcgcccacctttggtgggt 7866671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 1898964 - 1899085
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||| ||||||||||||| ||||||| ||||||||| |||| |||  ||||||||||||||||  ||||||||||      |||||||    
T  1898964 cagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc------gcacgag 1899057  T
Q  307 ccgaattattcgcccaccattggtgggt 334  Q
    |||||||| || |||||| || ||||||    
T  1899058 ccgaattagtcacccaccttttgtgggt 1899085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 334
Target Start/End: Complemental strand, 20682746 - 20682634
Alignment:
Q  222 cattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccc 321  Q
    ||||| ||||| ||| ||||||| ||  ||||| ||||||||  ||||||||||||||||  ||||||||||||||| |||||||||| |||| ||| ||    
T  20682746 cattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgacc 20682647  T
Q  322 accattggtgggt 334  Q
    ||| || ||||||    
T  20682646 acctttagtgggt 20682634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 9812833 - 9812964
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| | |   |||||||||||||||  ||| |||||| |||| ||| |    
T  9812833 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatg 9812932  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    | ||| |||| ||||||||| |||||||||||    
T  9812933 aaccggattagtcgcccacctttggtgggtca 9812964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 12081892 - 12081995
Alignment:
Q  228 aaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 327  Q
    ||||| ||||||||||| ||| ||||| ||||  ||  ||||||||||||||||  |||||||||| |||| ||||||||||||||| ||| ||||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  328 ggtg 331  Q
    ||||    
T  12081992 ggtg 12081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 14152011 - 14152134
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| |||||| | ||||| ||||||||| ||||  || |||||||||||||||||  ||| |||||| ||||| || |    
T  14152011 tccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatg 14152110  T
Q  305 agccgaattattcgcccaccattg 328  Q
    ||||| |||| ||| |||||||||    
T  14152111 agccggattaatcgtccaccattg 14152134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 32874799 - 32874878
Alignment:
Q  256 gatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||| ||| |||||||||||||| || |||||||| ||| || ||||||||||||||| ||| ||||||||||||||||    
T  32874799 gattttcaaggggaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtc 32874878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 4016401 - 4016271
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||| |||||||||||||| ||| | | | | || |||||| ||||  ||  ||||||||| ||||||  |||||||||||||||  ||||    
T  4016401 tccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacg 4016302  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| | || |||||||||||||||    
T  4016301 agccggattagttgctcaccattggtgggtc 4016271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 5732066 - 5731973
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| |||   |||||||||||||||  |||||||||||||||    
T  5732066 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 5731973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 9805006 - 9805095
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||| ||||| ||||||||||    
T  9805006 taccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 9805095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 309
Target Start/End: Original strand, 28857089 - 28857193
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| | | ||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  28857089 tccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 28857188  T
Q  305 agccg 309  Q
    |||||    
T  28857189 agccg 28857193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 12704975 - 12705106
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||| | |   ||||||||||||| |  ||| |||||| |||| ||| |    
T  12704975 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatg 12705074  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    | ||| |||| ||||||||| |||||||||||    
T  12705075 aaccggattagtcgcccacctttggtgggtca 12705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 26077102 - 26077205
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||| |||  |||||||||||||| ||||  ||||| |||  |||| |||| ||| |||||||||||||||||  |||| |||||||||| |||||    
T  26077102 tccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgcacatgcctctacgcacg 26077201  T
Q  305 agcc 308  Q
    ||||    
T  26077202 agcc 26077205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 334
Target Start/End: Complemental strand, 11845944 - 11845818
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||| ||| | | || |||||| |||||| |  |||||||||| |||||  ||||||||||||||| | | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  308 cgaattattcgcccaccattggtgggt 334  Q
    ||||||| ||||||||| ||| |||||    
T  11845844 cgaattaatcgcccacctttgatgggt 11845818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 340
Target Start/End: Complemental strand, 7308512 - 7308375
Alignment:
Q  203 gttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 302  Q
    |||| |||||||||  |||||||||||||| ||||  | ||| || |||||| |||| |||  |||||||||||||||   |||| |||||||||| |||    
T  7308512 gttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgca 7308413  T
Q  303 cgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
     |||||| |||| |||| |||| ||| ||| |||||||    
T  7308412 tgagccggattagtcgctcacctttgatggatcaaaaa 7308375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 24463986 - 24463913
Alignment:
Q  251 ggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    |||| ||||| ||| | |||||||| |||||  |||||||||||||||||||||||||| |||| |||||||||    
T  24463986 ggttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacc 24463913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 15034036 - 15034139
Alignment:
Q  204 ttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 303  Q
    |||||||||||||| |||| ||||||||||||| ||||||| |||||||||  |||||||  || |||||| |||||   ||| ||||||||||| |||     
T  15034036 ttccagtggcaaga-gctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcat 15034134  T
Q  304 gagcc 308  Q
    |||||    
T  15034135 gagcc 15034139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 42291610 - 42291532
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    |||||||||||||| |||  | ||||||||||||||  |||| |||||||||| |||||||||| |||| ||| |||||    
T  42291610 taccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacc 42291532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 18136426 - 18136292
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| || |||||||| || ||||||||| |||| |||  ||||||||| |||||   ||| |||||||||||  || |    
T  18136426 tccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatg 18136327  T
Q  305 agccg----aattattcgcccaccattggtgggtc 335  Q
    |||||    ||||| ||| ||||||||||||||||    
T  18136326 agccggattaattagtcgtccaccattggtgggtc 18136292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 23383659 - 23383748
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  23383659 taccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 23383748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 30995085 - 30995209
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| |||   ||||| |||| |||| |||| |||  ||||||||| ||||||  | ||||||||||||| ||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagc 30995184  T
Q  308 cgaattattcgcccaccattggtgg 332  Q
    || |||| |||| || | |||||||    
T  30995185 cggattagtcgctcatctttggtgg 30995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 40117427 - 40117503
Alignment:
Q  256 gatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgg 332  Q
    ||||||||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||  |||| |||||||    
T  40117427 gatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtgg 40117503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 37263202 - 37263320
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||| ||||| ||| ||||||| || |||||| ||||  ||  ||||||||||||||||   |||||||||||||| |||||    
T  37263202 tccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccaatgcgcatgcctctacgcacg 37263300  T
Q  305 agccgaattattcgcccacc 324  Q
    ||||| |||| ||| |||||    
T  37263301 agccggattagtcgtccacc 37263320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 39728348 - 39728467
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||| | ||| ||||||| |||| |||| ||||  || ||| |||||| ||||||  ||| ||||||||||| || ||    
T  39728348 tccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgcctctacgctcg 39728447  T
Q  305 agccgaattattcgcccacc 324  Q
    || ||||||| |||| ||||    
T  39728448 agtcgaattagtcgctcacc 39728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 2485158 - 2485287
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||||||||||||| |||| | |||| ||| ||||| |||| || | ||||||||| || ||| |||||||||||||||| | | |    
T  2485158 tccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgatt-cctaggggaacaaccctgggcctgtgcgcatgcctctacgtatg 2485256  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    || || |||| |||| |||| ||| ||||||    
T  2485257 agtcggattagtcgctcacctttgatgggtc 2485287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 332
Target Start/End: Complemental strand, 3654044 - 3653933
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| |||| || ||||||||| |||| | | ||  ||||||||||| |  ||||||||||||||| ||||||| || |||| |||    
T  3654044 gctctttccaaggacgtacccggagaataccgggttcgattcctagag--aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcg 3653947  T
Q  319 cccaccattggtgg 332  Q
     ||||| |||||||    
T  3653946 tccacctttggtgg 3653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 18262731 - 18262645
Alignment:
Q  238 ccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    ||||||| |||||||||  |||| ||  |||||||||||||| |  |||||||| ||||||  ||||||||| |||| |||||||||    
T  18262731 ccggggaataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacc 18262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 20692913 - 20692991
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 302  Q
    ||||||||| ||| ||||||| |||||||||||||| | | ||| |||||||||||||  || | ||||||||| ||||    
T  20692913 ttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagtacacatgcctctgtgca 20692991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 41163605 - 41163476
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||| | ||| ||||||| ||||||||| || |||| | |||||||||| |||||  |||| |||| ||||| ||| |    
T  41163605 tccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcga-ttcccaggggaacaacgtttggccagtgcacatgtctctacgcatg 41163507  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| | |||| ||| ||||| || |||||||    
T  41163506 agctggattagtcgtccaccttttgtgggtc 41163476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 9168337 - 9168264
Alignment:
Q  267 ggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    |||||||||||||||  |||||||| |||||| ||| |||||| |||| ||| ||||| || ||||||| ||||    
T  9168337 ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaa 9168264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 7336604 - 7336708
Alignment:
Q  228 aaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 327  Q
    ||||| ||||||| ||| || |||||| |||||| || | |||||||||||     ||||||||||||||| |||||||||| |||| ||| | ||| ||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggagaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctaccttt 7336703  T
Q  328 ggtgg 332  Q
    |||||    
T  7336704 ggtgg 7336708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 331
Target Start/End: Complemental strand, 14588741 - 14588637
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 326  Q
    |||||| ||||| ||||| || |||||| ||||| ||   |||| |||||||| |  ||||||||||||||| ||| |||||| |||| ||| ||||| |    
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  327 tggtg 331  Q
    |||||    
T  14588641 tggtg 14588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 25294920 - 25295049
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||||||||||| ||||||||||||||  |   || |||||| ||||||  ||||||||||||||||||| |    
T  25294920 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatg 25295019  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| ||| |||||||||||||||    
T  25295020 agccggattagtcgtccaccattggtgggt 25295049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 13893886 - 13894013
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| || |||||||| ||||||||| ||||||||  |||||||||||||||    ||||||||||||||  ||||    
T  13893886 tccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacg 13893985  T
Q  305 agccgaattattcgcccaccattggtgg 332  Q
    ||||| |||| ||||||||| |||||||    
T  13893986 agccggattagtcgcccacctttggtgg 13894013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 30767394 - 30767264
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||||||||| | ||||| || |||||| ||||||||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  30767394 tccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacg 30767295  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  30767294 agccggattagtcgcccacctttggtgggtc 30767264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 47219118 - 47219234
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||||||||||| |||| |||| |||| |||| || |||||||||||||| ||||||||||||||| ||| |||||| |||| |||    
T  47219118 gctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcg 47219217  T
Q  319 cccaccattggtgggtc 335  Q
     ||||| ||| ||||||    
T  47219218 tccacctttgatgggtc 47219234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 10855344 - 10855459
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||||||||||   ||| | ||||||||||||||||||  ||||||||||||||||  || |||||||||||| |||||    
T  10855344 tccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacg 10855443  T
Q  305 agccgaattattcgcc 320  Q
    | |||||||| |||||    
T  10855444 aaccgaattagtcgcc 10855459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 15320146 - 15320277
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| ||||||| ||||||||| |||||| |   ||||||| | |||||  ||| ||||||||||| |||||    
T  15320146 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacg 15320245  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||||||||| |||||||||||    
T  15320246 agccggattagtcgcccacctttggtgggtca 15320277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 47749232 - 47749122
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| |||||| |||| ||||||||| |||| || | ||||||||| ||||||  ||||||||||||||| ||||||||||||||| ||||||||    
T  47749232 ttccaaggacgtatccagggaataccgggttcgatt-cctaggggaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccac 47749134  T
Q  324 cattggtgggtc 335  Q
    | ||||| ||||    
T  47749133 ctttggtaggtc 47749122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 15795626 - 15795506
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| ||||||| ||||| ||| |||| |||  |||||||||||||||   ||||||||||||||| |||||||| |||||| |||    
T  15795626 gctccttccaaggacgtacccggggaataccgagttcgattcccag-gggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtcg 15795528  T
Q  319 cccaccattggtgggtcaaaaa 340  Q
    ||||||| ||||||||| ||||    
T  15795527 cccaccaatggtgggtcgaaaa 15795506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 29135873 - 29136002
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||  ||||||||| ||||||||||| |||||| || |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  29135873 tccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 29135972  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| ||  |||||||||||||||    
T  29135973 agccggattagtcttccaccattggtgggt 29136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 3507644 - 3507550
Alignment:
Q  241 gggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||| |||||||||||||| | | |||||||||| ||||||  ||||||||||||||| |||||||||| |||| |||| |||| ||||||||||    
T  3507644 gggaataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtc 3507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 26207948 - 26207818
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||||||| ||||||| ||||||||| |||| |||  |||||||||||||| |  ||| ||||||||||| ||| |    
T  26207948 tccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatg 26207849  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| |||  ||| |||||||    
T  26207848 agccggattagtcggccattattagtgggtc 26207818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 29127879 - 29128009
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  | || ||||||||| ||||| ||||| || |||||| ||||||||  | ||||||| |||||   ||||||||||||||| ||| |    
T  29127879 tccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatg 29127978  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  29127979 agccggattagtcgcccacctttggtgggtc 29128009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 29762302 - 29762172
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||||||||||| |||||| || |||||  ||||  ||  || |||||| ||||||  ||||||||||||||||||| |    
T  29762302 tccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatg 29762203  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| | |||| ||| ||||||||||||||||    
T  29762202 agctggattagtcgtccaccattggtgggtc 29762172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 45877414 - 45877544
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  || | ||||||||| ||||||||||| ||||||||| ||||||||  || |||||| ||||||  |||| |||||||||| ||| |    
T  45877414 tccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatg 45877513  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||||||| ||||||    
T  45877514 agccggattagtcgttcaccattgatgggtc 45877544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 51683101 - 51682971
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||| ||  |||| |||||| || ||||||||||| |||| |||| |||| |||  |||||||||||||| |  ||||||||||||||   ||||    
T  51683101 tccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacg 51683002  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||||||||| |||||||||    
T  51683001 agccggattagtcgcccaccaatggtgggtc 51682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 42412921 - 42412801
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||||| ||||||||||| ||||||||| |||| ||   ||||||||||||||||  |||| |||||||||| ||| |    
T  42412921 tccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatg 42412822  T
Q  305 agccgaattattcgcccacca 325  Q
    ||||| |||| |||| |||||    
T  42412821 agccggattagtcgctcacca 42412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 332
Target Start/End: Original strand, 49198330 - 49198438
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    |||||||||  |||||||||| ||||||||| |||| | |  ||||||||| ||||||  ||||||||||||||| ||| |||||| |||| ||| ||||    
T  49198330 ttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccac 49198429  T
Q  324 cattggtgg 332  Q
    |||||||||    
T  49198430 cattggtgg 49198438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 49543482 - 49543609
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| |||||| |||| || |||||| ||||  ||  |||||||||| ||||   ||| ||||||||||| ||||||||    
T  49543482 agtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagc 49543581  T
Q  308 cgaattattcgcccaccattggtgggtc 335  Q
    ||||||| ||||||||| || |||||||    
T  49543582 cgaattagtcgcccacctttagtgggtc 49543609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 7328823 - 7328938
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||| ||||| | ||||||||| |||| |||  ||||||||| ||||||  |||||||||||| || ||| |||||| |||| ||||||||    
T  7328823 ttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccac 7328921  T
Q  324 cattggtgggtcaaaaa 340  Q
    | |||||||||| ||||    
T  7328922 ctttggtgggtcgaaaa 7328938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 332
Target Start/End: Original strand, 8164548 - 8164640
Alignment:
Q  240 ggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgg 332  Q
    ||||| |||||||||  ||||| || ||||||||||||||||  |||||||||||| || ||||||| || |||| ||||||||| |||||||    
T  8164548 ggggaataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtgg 8164640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 43330800 - 43330744
Alignment:
Q  284 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  43330800 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaa 43330744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 45402495 - 45402368
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||| ||||||||   ||||||| ||||||| || |||||| |||| | | |||||||||| || ||| |||||||||||||||| ||| |    
T  45402495 tccagtggcaagaagctcattc---ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatg 45402399  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||| || |||||||    
T  45402398 agccggattagtcgttcacctttagtgggtc 45402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 47471806 - 47471921
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||| |  |||| ||||||||| |||| |||  |||||||| |||||||| |||||||||| |||| ||| ||||||||||| |||    
T  47471806 gctccttccaaggacgtacctagggaataccgggttcgattcccag-gggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcg 47471904  T
Q  319 cccaccattggtgggtc 335  Q
     ||||| ||||||||||    
T  47471905 tccacctttggtgggtc 47471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 55069804 - 55069696
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 326  Q
    |||||| |||| | |||| ||| |||||||||| | | ||||||||||| |||||  |||| |||||||||| |||||||||| |||| |||| |||| |    
T  55069804 caaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctt 55069705  T
Q  327 tggtgggtc 335  Q
    |||||||||    
T  55069704 tggtgggtc 55069696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 6462375 - 6462481
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||||| ||||| ||||||||| ||||  ||  | ||||||||||||||  ||||||||||||||| ||| ||||    
T  6462375 agtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagc 6462474  T
Q  308 cgaatta 314  Q
    || ||||    
T  6462475 cggatta 6462481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 28572358 - 28572228
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||| | | | ||||||| ||| ||||| |||| |||  || |||||||||||||  ||  ||||||||||| |||||    
T  28572358 tccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacg 28572259  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  28572258 agccggattagtcgcccacctttggtgggtc 28572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 35315916 - 35316046
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| ||||||||| ||| |||| || || |||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  35315916 tccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 35316015  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| | |||| ||||||||  ||||||||||    
T  35316016 agctggattagtcgcccacttttggtgggtc 35316046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 50405686 - 50405620
Alignment:
Q  269 aacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||| |  ||||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtc 50405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 51060428 - 51060298
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||   |||| |||||||||| |||||||||| || |||||| ||||  ||  ||||||||| |||||   ||||||||||||||| ||| |    
T  51060428 tccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatg 51060329  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    | | | |||| ||| ||||||||||||||||    
T  51060328 aactggattagtcgtccaccattggtgggtc 51060298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 54261186 - 54261316
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| | ||||| ||||||||| |||| | |   |||||||||||||||  ||||||||||||||| ||| |    
T  54261186 tccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 54261285  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||| || |||||||    
T  54261286 agccggattagtcgttcacctttagtgggtc 54261316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 10040517 - 10040645
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||| ||||| ||| ||||||| || |||||| ||||  ||  ||||||||||||||||  ||||||||||||||| |||||    
T  10040517 tccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccagtgcgcatgcctctacgcacg 10040615  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| | |  ||| ||||| |||||||||    
T  10040616 agccggaatggtcgtccacctttggtgggt 10040645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 11687256 - 11687163
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||||||||| |||| ||||||||| ||| | || || ||||||||||||||  ||  |||||||| |||||||  |||||||||||||||    
T  11687256 tccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctcta 11687163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 48341980 - 48342073
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||||||||  |||| ||||||||| ||| | ||||| |||||||||  ||| | |  ||||||||||||||||| |||||||||||||||    
T  48341980 tccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctcta 48342073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 52364933 - 52364845
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||| ||||||||| ||| ||||||| ||||| ||| |||| ||| | ||||||||||||| |  ||||||||||||||| ||||||||    
T  52364933 gctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagc 52364845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 41630659 - 41630529
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| ||||| ||| ||| ||||  | |||||||||  ||| |||| |||||||||||||| |  |||||||||||||||  || |    
T  41630659 tccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatg 41630560  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||| ||||    
T  41630559 agccggattagtcgcccacctttggttggtc 41630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 7613071 - 7612987
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcat 291  Q
    ||||||||||  |||| ||||||||| |||   ||||| ||||||||| |||| |||  ||||||||||||||||| ||||||||    
T  7613071 cagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 26362068 - 26361984
Alignment:
Q  251 ggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| |||| |||||||||| ||||   ||| ||||||||||| |||||||||| |||| |||| |||| ||| ||||||    
T  26362068 ggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtc 26361984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 49021271 - 49021220
Alignment:
Q  284 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  49021271 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 49021220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 2029350 - 2029284
Alignment:
Q  269 aacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||| | || |||||||||||| ||| |||| | |||| ||||||||||||| ||||||    
T  2029350 aacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtc 2029284  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 3136836 - 3136711
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||| |||| || |||||| ||| ||||||| |||||| || ||||| ||  ||||||||| |||||   ||||||||||||||| ||| ||| |    
T  3136836 gtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcag-gggaacaacacttgggcagtgcgcatgcctctacgcatgagtc 3136738  T
Q  309 gaattattcgcccaccattggtgggtc 335  Q
    | |||| ||| ||||| ||||| ||||    
T  3136737 ggattagtcgtccacctttggttggtc 3136711  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 26043813 - 26043903
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    ||||||||| |||| |||  | ||||||| ||||||  ||||||||||||||| ||| |||||| |||| |||| |||| |||||| ||||    
T  26043813 taccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtca 26043903  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 39849032 - 39849149
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||  | |||| |  |||||| |||| ||| ||| |||||||||||||  ||| ||||||||||| ||| |    
T  39849032 tccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagagg-aacaacgcttggccagtgtgcatgcctctacgcatg 39849130  T
Q  305 agccgaattattcgcccac 323  Q
    ||||| |||| ||||||||    
T  39849131 agccggattagtcgcccac 39849149  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 7310809 - 7310720
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| |||||||||| |||| |||| || | ||||||||||    
T  7310809 taccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtc 7310720  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 330
Target Start/End: Original strand, 31072838 - 31072963
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| || |||||| ||| |||| || |||| |||| ||||||||  |||||||||||||||   |||| |||||||||| |||||    
T  31072838 tccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacg 31072937  T
Q  305 agccgaattattcgcccaccattggt 330  Q
    | ||  |||| ||| ||||| |||||    
T  31072938 acccagattaatcgtccacctttggt 31072963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 340
Target Start/End: Original strand, 33251636 - 33251757
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||||  ||||| ||||||||| |||| ||   |||||||||| |||||  ||| ||||||||||| ||| |||||| |||| |||    
T  33251636 gctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcg 33251735  T
Q  319 cccaccattggtgggtcaaaaa 340  Q
     ||||  ||| |||||| ||||    
T  33251736 tccacatttgatgggtcgaaaa 33251757  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 45450591 - 45450501
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||||||||||| |||||||||||| | |||||||  || ||| ||||||||||||||  |||||||| ||||| |  |||||||||||||||    
T  45450591 tccagtggcaaga-gctcattccaag-acgtatccgtagaatactgggtttgatttccag-gggaacaatgcttgaccagtgcgcatgcctcta 45450501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 13167561 - 13167497
Alignment:
Q  234 gtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    ||||| ||||| || |||||| |||| ||||| |||||||||||||||  |||| ||||||||||    
T  13167561 gtatctggggaatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 13167497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Original strand, 19146983 - 19147051
Alignment:
Q  267 ggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    |||||||||||||||  ||| | || ||||||||||||||| | |||| ||| ||||| ||||||||||    
T  19146983 ggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtc 19147051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 35923709 - 35923661
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 314  Q
    |||||||||| |||||  ||||||||||||||| ||||||| |||||||    
T  35923709 gggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaatta 35923661  T

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Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 18915830 - 18915957
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||  ||||||||| ||| ||||||| ||||||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||||    
T  18915830 cagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgag 18915929  T
Q  307 ccgaattattcgcccaccattggtgggt 334  Q
    ||| |||| |||| ||||||||||||||    
T  18915930 ccggattagtcgctcaccattggtgggt 18915957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 43959968 - 43959849
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||| ||||| |||||| || ||| ||||||| || ||||||  ||| |||  ||||||||||||||||  ||||||||||||||| |||||    
T  43959968 tccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacg 43959869  T
Q  305 agccgaattattcgcccacc 324  Q
    ||||| |||| |||||||||    
T  43959868 agccggattagtcgcccacc 43959849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 10173118 - 10172988
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||||||||||| ||||| ||||||||| ||||| ||||| |||||| ||  ||| ||| |  ||||||||||||||  |||| |||||||||| ||| |    
T  10173118 tccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatg 10173019  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||||||||| ||||||||||    
T  10173018 agccggattactcgcccacctttggtgggtc 10172988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 41664003 - 41663873
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||| ||||| ||||||||||| ||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  41664003 tccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatg 41663904  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||| | |||| ||| ||||||||||||||||    
T  41663903 agctggattagtcgtccaccattggtgggtc 41663873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 340
Target Start/End: Complemental strand, 33004148 - 33004027
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||||||||||| || ||| || ||||||||  || ||||| |||||||  ||||||||||||||| |||||||||| |||| ||     
T  33004148 gctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtca 33004049  T
Q  319 cccaccattggtgggtcaaaaa 340  Q
    ||||||| ||||||||| ||||    
T  33004048 cccaccaatggtgggtcgaaaa 33004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 48798217 - 48798108
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| || ||||||||||| || |||||| ||||||||  |||||||||||||| || ||||||||||||||| ||| |    
T  48798217 tccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatg 48798118  T
Q  305 agccgaatta 314  Q
    ||||| ||||    
T  48798117 agccggatta 48798108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 334
Target Start/End: Original strand, 37339799 - 37339910
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaaggga-acaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccca 322  Q
    ||||||||||||| ||||||| ||||||||| |||| |||  |||  ||||||||||||  ||||||||||||| | |||||||||| |||| |||||||    
T  37339799 ttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgccca 37339898  T
Q  323 ccattggtgggt 334  Q
    || |||||||||    
T  37339899 cctttggtgggt 37339910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 8763956 - 8764082
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||| ||||||||| ||| ||||||| || |||||| | || |||  ||||||||| ||||||  ||||||||||||||| |||||||||    
T  8763956 gtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcc 8764055  T
Q  309 gaattattcgcccaccattggtgggtc 335  Q
    | |||| ||| ||||| ||||||||||    
T  8764056 ggattagtcgtccaccgttggtgggtc 8764082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 21849291 - 21849217
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||| |||| ||| ||||||||||| ||||    
T  21849291 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaa 21849217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 26325773 - 26325903
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| || |||||| ||||||| ||| || |||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  26325773 tccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatg 26325872  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||||||||||||||    
T  26325873 agccggattagtcgtccaccattggtgggtc 26325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 49078075 - 49078205
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||| ||||| ||||||||||| ||||||||| |||| |||  || |||||| ||||||  ||||||||||||||| ||| |    
T  49078075 tccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatg 49078174  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| |||  |||||||||| ||||    
T  49078175 agccggattagtcgttcaccattggtaggtc 49078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 50503486 - 50503378
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 326  Q
    |||||| ||||||||||| || |||||| |||| |||  ||||||||| |||| |  ||||||||||||||| |||||||||| |||  ||||||||||     
T  50503486 caaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaa 50503387  T
Q  327 tggtgggtc 335  Q
    |||||||||    
T  50503386 tggtgggtc 50503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 336
Target Start/End: Complemental strand, 30927874 - 30927743
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| ||| | ||| | || |||||| |||||||| |||||||||||||||||   || ||||||||||| ||| |    
T  30927874 tccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatg 30927775  T
Q  305 agccgaattattcgcccaccattggtgggtca 336  Q
    ||||| |||| ||| ||||  |||||||||||    
T  30927774 agccggattagtcgtccacttttggtgggtca 30927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 335
Target Start/End: Complemental strand, 40288621 - 40288494
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| |||| |||||| ||||||||| ||||||||  |||||||||| |||||  ||  |||||||||||  |||||||    
T  40288621 agtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagc 40288522  T
Q  308 cgaattattcgcccaccattggtgggtc 335  Q
    || |||| |||| || | ||||||||||    
T  40288521 cggattagtcgctcatccttggtgggtc 40288494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 5855483 - 5855613
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| |||| |||||| ||||||||| |||| |||   |||||||||||||||  ||||||||||||||| ||| |    
T  5855483 tccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 5855582  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    || || |||| |||  |||| || |||||||    
T  5855583 aggcggattagtcgttcacctttagtgggtc 5855613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 11398035 - 11397906
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||||||||||||||| || ||||||||| || |||| | |||||||||| |||||   |||| ||||||||| ||| |    
T  11398035 tccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcga-ttccgaggggaacaacgtttggccaatgcgtatgcctctacgcatg 11397937  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    || || |||| ||| ||||| ||||||||||    
T  11397936 agtcggattagtcgtccacctttggtgggtc 11397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 33418262 - 33418132
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| |||||| || ||| |||| || |||||| || |||| | |  ||| ||||||||||||  |||||||||||||||||||||    
T  33418262 tccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacg 33418163  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||| ||||    
T  33418162 agccggattagtcgtccacctttggtcggtc 33418132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 34334439 - 34334353
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcc 294  Q
    |||||||||  |||||||||||||| ||||||||||| ||||||||| |||| |||  ||||||||| ||||||  |||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 9659325 - 9659197
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||||||| ||||| |||  |||||| ||||||||| |||| |||  |||||||||| ||| || |||||||||||| || ||| |    
T  9659325 tccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccag-gggaacaacgtttgactagtgcgcatgcctttacgcatg 9659227  T
Q  305 agccgaattattcgcccaccattggtgggt 334  Q
    ||||| |||| ||| ||||| |||||||||    
T  9659226 agccggattagtcgtccacctttggtgggt 9659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 10336475 - 10336596
Alignment:
Q  203 gttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 302  Q
    ||||||||||||||  |||| |||||| || |||||||| || || |||||| ||||| ||  |||||||||||||| |  ||||||||||||||| |||    
T  10336475 gttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgca 10336574  T
Q  303 cgagccgaattattcgcccacc 324  Q
     |||||| |||| ||| |||||    
T  10336575 tgagccggattaatcgtccacc 10336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 10422751 - 10422874
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||| |||||| || |||| |||||| ||||||||| |||||| |   |||||||| ||||||  ||||||||||||||| ||| |||    
T  10422751 cagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgag 10422850  T
Q  307 ccgaattattcgcccaccattggt 330  Q
    ||| |||| ||| ||||| |||||    
T  10422851 ccggattagtcgtccacctttggt 10422874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 14254400 - 14254285
Alignment:
Q  220 ctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgc 319  Q
    ||||||||||||| |||| |||||| ||||| ||| ||||| ||  ||||||||||||||||  || ||||||||| || ||| |||||| |||| |||     
T  14254400 ctcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgt 14254301  T
Q  320 ccaccattggtgggtc 335  Q
    ||||| ||| ||||||    
T  14254300 ccacctttgatgggtc 14254285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 17642151 - 17642021
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||| ||||  |||| ||||| ||| ||| || || | ||| ||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  17642151 tccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 17642052  T
Q  305 agccgaattattcgcccaccattggtgggtc 335  Q
    ||||| |||| ||| ||||| ||||||||||    
T  17642051 agccggattagtcgtccacctttggtgggtc 17642021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 32142978 - 32142863
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||||||||||||| ||| || || || |||||||| ||||| ||  ||||||||| ||||||  |||||||||||| || ||| ||||||||||| |||    
T  32142978 gctcattccaaggacgtaccctggaat-accgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcg 32142880  T
Q  319 cccaccattggtgggtc 335  Q
    | |||| ||| ||||||    
T  32142879 ctcacctttgatgggtc 32142863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 12036887 - 12036764
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||| |||| ||||||||| ||| |  | || ||| |||||||||| | |  |||||||| |||||||  ||||||||||||||| |||||||||    
T  12036887 gtggcaagaagctccttccaaggacgtacctagagaatactgggtttgattcctagggggaacaatgcttggccagtgcgcatgcctctacgcacgagcc 12036788  T
Q  309 gaattattcgcccaccattggtgg 332  Q
      |||| ||| ||||| |||||||    
T  12036787 agattaatcgtccacctttggtgg 12036764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 31152680 - 31152803
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||||||| || |||| ||||||||| |||||||   ||||| |||||||||   |||||| ||||||||  ||||||     
T  31152680 agtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagt 31152779  T
Q  308 cgaattattcgcccaccattggtg 331  Q
    | ||||| ||| ||||| ||||||    
T  31152780 caaattagtcgtccacctttggtg 31152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 2981075 - 2980977
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    |||||||||  |||| ||||| ||| ||||||||||| ||| ||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||||    
T  2981075 agtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgag 2980977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 12744609 - 12744539
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    |||||||||||||| || ||||||||| ||||| ||| ||||||||||| |||| |||  |||||||||||    
T  12744609 gggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtca 12744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 12755599 - 12755529
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtca 336  Q
    |||||||||||||| || ||||||||| ||||| ||| ||||||||||| |||| |||  |||||||||||    
T  12755599 gggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcactgttggtgggtca 12755529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 18649485 - 18649380
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||||| || || || |||||| ||||| ||  |||||||||||||| |  ||||||||||||||| | |||||||  |||| |||    
T  18649485 gctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcg 18649386  T
Q  319 cccacc 324  Q
    ||||||    
T  18649385 cccacc 18649380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 34719742 - 34719867
Alignment:
Q  210 tggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 309  Q
    |||||||  |||| ||||||||| ||| | ||||| ||| ||||| |||| |||  ||||| |||||||| |  ||||||||||||||| ||||||| |     
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtca 34719841  T
Q  310 aattattcgcccaccattggtgggtc 335  Q
     |||| |||| |||| ||||||||||    
T  34719842 gattagtcgctcacctttggtgggtc 34719867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 15465940 - 15466056
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 318  Q
    |||| ||||||||| ||||  ||||| |||| |||| ||||||||  |||||||||||||||   |||| |||||||||| ||||||| |  |||  |||    
T  15465940 gctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcg 15466039  T
Q  319 cccaccattggtgggtc 335  Q
    | |||| ||||||||||    
T  15466040 ctcacctttggtgggtc 15466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 47313026 - 47312943
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||| ||||| ||||| |||||||||||| |||| | |||||||||| |||||  ||||| ||||||||| ||| |||||    
T  47313026 ttccaaggacgtatctggggaataccgggtttga-ttcctaggggaacaacgtttggccagtgcgtatgcctctacgcatgagcc 47312943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 6563402 - 6563505
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||||||| |||  ||  |||||||| |||| | |  ||||||||||||||||  |||| |||| ||||| |||||    
T  6563402 tccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcacg 6563501  T
Q  305 agcc 308  Q
    ||||    
T  6563502 agcc 6563505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 16263528 - 16263599
Alignment:
Q  227 caaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    |||||| ||||| ||||| |||| |||| ||||||||   |||||||||||||||  |||||||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctcta 16263599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 32151069 - 32150934
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||| || | || ||| || | |||| ||||||||  |||||||||  ||||   |||||||||||| || ||| |    
T  32151069 tccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatg 32150970  T
Q  305 agccgaattattcgcccaccattggtgggtcaaaaa 340  Q
    |||||||||| |||| |||| ||| |||||| ||||    
T  32150969 agccgaattagtcgctcacctttgatgggtcgaaaa 32150934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 45536688 - 45536767
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 303  Q
    |||||| || ||| |||| || ||||||||| |||||| || ||||||||||||||||  |||| |||||||||| ||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgcac 45536767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 5063986 - 5063866
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||| |||| ||||||||| ||||| ||||| ||  || || |||| |  | ||| ||||||||||||  ||||| ||| ||||||||||||||     
T  5063986 gtggcaagaagctccttccaaggacgtatctggggaatattggattcgatt-cttaggggcacaacgcttggccagtgcgtatgtctctatgcacgagct 5063888  T
Q  309 gaattattcgcccaccattggt 330  Q
    | |||| ||||||||| |||||    
T  5063887 ggattagtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 16956432 - 16956557
Alignment:
Q  210 tggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 309  Q
    |||||||  |||| ||||||||| ||| ||||||| ||||| ||| | ||  ||  || ||||||| ||| |  ||||||||||||||| ||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccg 16956531  T
Q  310 aattattcgcccaccattggtgggtc 335  Q
     |||| || | |||| ||||||||||    
T  16956532 gattagtcactcacctttggtgggtc 16956557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 34697357 - 34697414
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||| ||||||| ||| ||||||||||| ||| |||||| |||| ||||||||    
T  34697357 gggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccac 34697414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 13262063 - 13262167
Alignment:
Q  224 ttccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 323  Q
    ||||||||||||||  ||||| ||||||||| ||||||||  | |||||||| ||||    | |||||| ||||| ||||||| || |||| ||| ||||    
T  13262063 ttccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccac 13262162  T
Q  324 cattg 328  Q
    |||||    
T  13262163 cattg 13262167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 45362027 - 45361899
Alignment:
Q  207 cagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 306  Q
    ||||||||||  |||| ||||||||| ||| || |||| ||||||||| ||||  ||   |||||||||||||||  ||||||||||| ||| |||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  307 ccgaattattcgcccaccattggtgggtc 335  Q
    ||| |||| |||  |||| || |||||||    
T  45361927 ccggattagtcgttcacctttagtgggtc 45361899  T

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Target: scaffold0006 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 68483 - 68612
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||  |||| ||||||||| ||| ||||| | || |||||| |||| |||  |||||||||||||||   ||||||||||||||| ||||||||    
T  68483 agtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagc 68579  T
Q  308 cgaattattcgcccaccattggtgggtcaaaaa 340  Q
    || |||| ||||||||| |||||||||| ||||    
T  68580 cggattagtcgcccacctttggtgggtcgaaaa 68612  T

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Target: scaffold0010 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 155796 - 155727
Alignment:
Q  266 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  155796 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 155727  T

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Target: scaffold0004 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 7961 - 7854
Alignment:
Q  225 tccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 324  Q
    |||||||| ||| ||||||| |||||||||||||| |||| ||||| ||| ||||||  ||||||||||||||| |||  ||| | |||| |||||||||    
T  7961 tccaaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacc 7862  T
Q  325 attggtgg 332  Q
     |||||||    
T  7861 tttggtgg 7854  T

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Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 95125 - 94996
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    |||| |||||||  |||| ||||||| | ||||||||||| |||| |||| |||||| |  || ||||||| ||| |  |||||||||||| || ||| |    
T  95125 tccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttcta--ggaaacaacgtttgaccagtgcgcatgcctttacgcatg 95028  T
Q  305 agccgaattattcgcccacca-ttggtgggtc 335  Q
    ||||| |||| |||||||||| ||||||||||    
T  95027 agccggattagtcgcccaccatttggtgggtc 94996  T

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Target: scaffold0291 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 6851 - 6948
Alignment:
Q  238 ccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||| ||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |||||| |||| |||| |||| ||||||||||    
T  6851 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtc 6948  T

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Target: scaffold0384 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 335
Target Start/End: Original strand, 5934 - 6065
Alignment:
Q  203 gttccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 302  Q
    |||| |||||||||  |||| || |||||  ||| ||||||| ||| ||||| ||||||||  |||| |||||||||||  |||| |||||||||| |||    
T  5934 gttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgca 6032  T
Q  303 cgagccgaattattcgcccaccattggtgggtc 335  Q
     ||| ||||||| ||| ||||||||||||||||    
T  6033 tgagacgaattagtcgtccaccattggtgggtc 6065  T

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Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 336
Target Start/End: Original strand, 12636 - 12764
Alignment:
Q  208 agtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 307  Q
    |||||||||| |||| ||||||||| ||  ||||||| ||||||||| ||||   |   |||||||||||||||  ||| ||||||||||| |||||| |    
T  12636 agtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaac 12735  T
Q  308 cgaattattcgcccaccattggtgggtca 336  Q
    || |||| ||||||||| ||| |||||||    
T  12736 cggattagtcgcccacctttgatgggtca 12764  T

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Target: scaffold0316 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 1725 - 1625
Alignment:
Q  240 ggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtcaaaa 339  Q
    ||||| |||| |||| ||||||||  |||||||||| || ||  ||||||||||||||| ||| ||||| ||||| ||||||||| |||||||||| |||    
T  1725 ggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaa 1626  T
Q  340 a 340  Q
    |    
T  1625 a 1625  T

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Target: scaffold0079 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 8152 - 8230
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 298  Q
    |||| ||||||||| ||| ||||||| ||||||||| |||| |||| ||||||||||||||||  |||||||||||||||    
T  8152 gctccttccaaggacgtacccggggaataccgggttcgattcccaa-gggaacaacgcttggccagtgcgcatgcctcta 8230  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 26181 - 26269
Alignment:
Q  240 ggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 328  Q
    ||||| ||| ||||| ||||||||  ||||||||||||||||  ||| ||||||||||| |||||||||| |||| ||| |||| ||||    
T  26181 ggggaatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattg 26269  T

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Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 72610 - 72686
Alignment:
Q  219 gctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctc 296  Q
    |||| ||||||||| ||||| ||| || |||||||| ||||||||| |||||||||||||| |  |||||||||||||    
T  72610 gctccttccaaggacgtatcagggaat-accgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctc 72686  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 8806 - 8717
Alignment:
Q  246 taccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 335  Q
    ||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  8806 taccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 8717  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 322
Target Start/End: Complemental strand, 271216 - 271103
Alignment:
Q  209 gtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 308  Q
    ||||||||  |||| ||||||||| ||| |||| || || |||||| |||| |||  |||||||||||||||   ||||||||| ||||| |||||||||    
T  271216 gtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagcc 271117  T
Q  309 gaattattcgccca 322  Q
    |  ||| |||||||    
T  271116 gggttagtcgccca 271103  T

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Target: scaffold0341 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 18595 - 18698
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||||||||||| |||  ||  |||||||| |||| | |  ||||||||||||||||  |||| |||| ||||| |||||    
T  18595 tccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcacg 18694  T
Q  305 agcc 308  Q
    ||||    
T  18695 agcc 18698  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 41007 - 41133
Alignment:
Q  205 tccagtggcaagatgctcattccaaggatgtatccggggattaccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 304  Q
    ||||||||||||  |||| ||||| ||| |||  | |||| || |||||| ||||  ||| ||||||||| |||||   ||| ||||||||||| |||||    
T  41007 tccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacg 41106  T
Q  305 agccgaattattcgcccaccattggtg 331  Q
    ||||| |||| ||||||| | ||||||    
T  41107 agccggattagtcgcccatctttggtg 41133  T

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