View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2117_low_7 (Length: 602)

Name: NF2117_low_7
Description: NF2117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2117_low_7
NF2117_low_7
[»] chr4 (20 HSPs)
chr4 (18-589)||(2471833-2472404)
chr4 (198-498)||(2460515-2460817)
chr4 (199-334)||(2367678-2367813)
chr4 (217-334)||(12124764-12124881)
chr4 (199-320)||(2373256-2373376)
chr4 (220-320)||(2621177-2621277)
chr4 (204-343)||(2547459-2547598)
chr4 (219-323)||(2491070-2491174)
chr4 (270-344)||(2381369-2381443)
chr4 (242-323)||(2486272-2486353)
chr4 (217-334)||(12126820-12126937)
chr4 (219-342)||(2525699-2525822)
chr4 (201-323)||(5102100-5102222)
chr4 (275-323)||(553992-554040)
chr4 (275-323)||(1547469-1547517)
chr4 (351-399)||(2467676-2467724)
chr4 (189-317)||(2519145-2519273)
chr4 (205-245)||(2625451-2625491)
chr4 (354-406)||(5035810-5035862)
chr4 (269-337)||(6007657-6007725)
[»] chr1 (2 HSPs)
chr1 (204-344)||(15837955-15838095)
chr1 (274-323)||(33161430-33161479)
[»] chr8 (1 HSPs)
chr8 (273-399)||(39516853-39516979)
[»] chr5 (2 HSPs)
chr5 (214-323)||(39252916-39253025)
chr5 (268-329)||(32268761-32268822)
[»] chr7 (1 HSPs)
chr7 (219-317)||(2576415-2576513)


Alignment Details
Target: chr4 (Bit Score: 490; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 18 - 589
Target Start/End: Original strand, 2471833 - 2472404
Alignment:
Q  18 cttttcagacagagctcgcaatccatcttcaggaatattgaaggcacggtaggagagatggggcgatttgatgtatgaattagggaaagtggaaagacgg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2471833 cttttcagacagagctcgcaatccatcttcaggaatattggaggcacggtaggagagatggagcgatttgatgtatgaattagggaaagtggaaagacgg 2471932  T
Q  118 agcgatttgatgtctgataaattagggaaagtggagatttcaacaagaagggcatcgaggtcaattctttcggaaaagagagagatgtcgagagaggtga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2471933 agcgatttgatgtctgataaattagggaaagtggagatttcaacaagaagggcatcgaggtcaattctttcggaaaagagagagatgtcgagagaggtga 2472032  T
Q  218 ggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgttt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2472033 ggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcagagacgattggtgatggagaaaaactgttt 2472132  T
Q  318 ggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaacttgaacctgacgcggcc 417  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2472133 ggagaccatggaaagagatttgaaagtctggttgttgtcgtcaaggaatttgaagatgctctcccatatttcctctggtaaacttgaacctgatgcggcc 2472232  T
Q  418 ttcatttttcttcttcgtttcttacggnnnnnnnctgtcgcaaccattgttgaaattctcttaattcattcattcattcccccgaaggctgctattattt 517  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2472233 ttcatttttcttcttcgtttcttacggtttttttctgtcgcaaccattgttgaaattctcttaactcattcattcattcccccgaaggctgctattattt 2472332  T
Q  518 ataggtcaaaactaaactcttctcaatcaaatttannnnnnnagaggtcttctcaatctgcttaattattat 589  Q
    |||||||||||||||||||||||||||||| ||         ||||||||||||||||||||| ||||||||    
T  2472333 ataggtcaaaactaaactcttctcaatcaatttattttttttagaggtcttctcaatctgctttattattat 2472404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 198 - 498
Target Start/End: Original strand, 2460515 - 2460817
Alignment:
Q  198 agagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacag---tagattgtgagggagaatcggagacga 294  Q
    |||||||||||||||||| |||||||| |||||||  |||| | || |||||||||| |||| |  |  |   | |||| |||| |||||||||||||||    
T  2460515 agagatgtcgagagaggttaggttaggaaacctttgaaagatgagacgaaggaaaggaattgctctatcggttttgattttgagagagaatcggagacga 2460614  T
Q  295 ttggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaagatgctctcccatatttcctctg 394  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2460615 ttggtgatggagaggaactgtttggagaccatggagagagatttgaaagtgtggtggttgtcgtcgaggaatttgaagatgctctcccatatttcctctg 2460714  T
Q  395 gtaaacttgaacctgacgcggccttcatttttcttcttcgtttcttacggnnnnnnnctgtcgcaaccattgttgaaattctcttaattcattcattcat 494  Q
    |||||  ||||| ||| ||||||||||||||| || ||||||||||| ||       |||  || |||||||||||| ||||||||| |||||||||| |    
T  2460715 gtaaatgtgaacatgatgcggccttcatttttgttgttcgtttctta-ggttttttcctgctgccaccattgttgaagttctcttaactcattcattcct 2460813  T
Q  495 tccc 498  Q
    ||||    
T  2460814 tccc 2460817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 2367813 - 2367678
Alignment:
Q  199 gagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattgg 298  Q
    |||| |||||| || |||||||| |||||||||| ||| ||| ||| ||||||||||||||||| |  | | ||||  | ||||||||||||||| ||||    
T  2367813 gagaagtcgagggatgtgaggttggggaacctttggaaaaggcgataaaggaaagggattgttttatcggacattgctatggagaatcggagacggttgg 2367714  T
Q  299 tgatggagaaaaactgtttggagaccatggaaagag 334  Q
    ||||||||| ||| ||||||||||| ||||||||||    
T  2367713 tgatggagagaaattgtttggagacgatggaaagag 2367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 12124764 - 12124881
Alignment:
Q  217 aggttagggaacctttcgaagaggtgatgaaggaaagggattgtttca-cagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgt 315  Q
    ||||| |||||||||| ||||||| | | ||||||||||||||||||| ||| |||||| || ||| ||| ||||||| ||||||||||||| ||| |||    
T  12124764 aggttggggaacctttggaagaggcggtcaaggaaagggattgtttcatcag-agattgcgatggaaaattggagacggttggtgatggagagaaattgt 12124862  T
Q  316 ttggagaccatggaaagag 334  Q
    |||||||| ||||| ||||    
T  12124863 ttggagacaatggagagag 12124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 2373376 - 2373256
Alignment:
Q  199 gagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattgg 298  Q
    |||| |||||| ||||||||||| |||||||||| ||||||| ||| ||||||||| ||||||| |  | | ||||  | ||||||||||||| ||||||    
T  2373376 gagaggtcgagggaggtgaggttggggaacctttggaagaggcgattaaggaaaggaattgttttatcg-acattgctatggagaatcggagatgattgg 2373278  T
Q  299 tgatggagaaaaactgtttgga 320  Q
    ||||||||| ||| ||||||||    
T  2373277 tgatggagagaaattgtttgga 2373256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 2621277 - 2621177
Alignment:
Q  220 ttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttgg 319  Q
    ||||||||||| ||||||||| || ||| ||||||||| |||| |  | ||||||||| |||||| || ||||| ||||||||||| |||||||||||||    
T  2621277 ttagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttgg 2621178  T
Q  320 a 320  Q
    |    
T  2621177 a 2621177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 204 - 343
Target Start/End: Original strand, 2547459 - 2547598
Alignment:
Q  204 gtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatg 303  Q
    |||||| || |||| |||||||||||||| ||||| |||| ||||| || ||||  | | || | |||||||||  ||||| |||||||| |||||||||    
T  2547459 gtcgagtgatgtgatgttagggaacctttggaagaagtgaggaagggaaaggatgatatgactggagattgtgactgagaaccggagacggttggtgatg 2547558  T
Q  304 gagaaaaactgtttggagaccatggaaagagatttgaaag 343  Q
    || | ||||||||||||||| ||||| || ||||| ||||    
T  2547559 gacagaaactgtttggagacgatggagagcgattttaaag 2547598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 323
Target Start/End: Original strand, 2491070 - 2491174
Alignment:
Q  219 gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttg 318  Q
    ||||||||||||||| |||||  ||| |||||||||||||||| ||  | |||||||||  || ||||||||||| || |||||||| | |||||||||     
T  2491070 gttagggaacctttcaaagagacgattaaggaaagggattgttgcatcggagattgtgaccgaaaatcggagacggtttgtgatggacagaaactgtttt 2491169  T
Q  319 gagac 323  Q
    |||||    
T  2491170 gagac 2491174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 2381443 - 2381369
Alignment:
Q  270 gattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagt 344  Q
    |||| ||| ||||||||||||||  |||||||| ||||  |||||||||||||| ||||||||||| ||||||||    
T  2381443 gattttgacggagaatcggagactgttggtgatcgagagtaactgtttggagacgatggaaagagacttgaaagt 2381369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 323
Target Start/End: Original strand, 2486272 - 2486353
Alignment:
Q  242 gatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagac 323  Q
    |||||||||||||||||||||    | |||||||||  |||||||||||||| ||||||||||| | ||||||||| |||||    
T  2486272 gatgaaggaaagggattgttttctcggagattgtgaccgagaatcggagacggttggtgatggacagaaactgttttgagac 2486353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 12126820 - 12126937
Alignment:
Q  217 aggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtt 316  Q
    ||||| |||||||||| ||| ||| | | ||||||||||||| |||||    ||| || || ||||||| ||||||| ||||||||||||| ||| ||||    
T  12126820 aggttggggaaccttttgaataggcggtcaaggaaagggattttttcatctgagactgcgatggagaataggagacggttggtgatggagagaaattgtt 12126919  T
Q  317 tggagaccatggaaagag 334  Q
    ||||||| ||||| ||||    
T  12126920 tggagacaatggagagag 12126937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 2525699 - 2525822
Alignment:
Q  219 gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttg 318  Q
    ||||||||||||||| |||||  ||| ||| |||||||| ||| ||  | |||||||||   ||||||| ||||  ||||||||||| | |||||||||     
T  2525699 gttagggaacctttcaaagagacgattaagaaaagggatagttgcattggagattgtgaccaagaatcgaagactgttggtgatggacagaaactgtttt 2525798  T
Q  319 gagaccatggaaagagatttgaaa 342  Q
    ||||| | ||| |||||| |||||    
T  2525799 gagacgagggagagagatctgaaa 2525822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 323
Target Start/End: Complemental strand, 5102222 - 5102100
Alignment:
Q  201 gatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttca-cagtagattgtgagggagaatcggagacgattggt 299  Q
    ||||| ||| || |||| |||||||||||||||||| ||| || ||| ||||||||| |||  | |||| ||||||||  |||||||| |||| ||| ||    
T  5102222 gatgttgagtgatgtgacgttagggaacctttcgaaaaggagaggaatgaaagggatggttcgatcagt-gattgtgaccgagaatcgaagactattagt 5102124  T
Q  300 gatggagaaaaactgtttggagac 323  Q
    ||| || ||||||||||| |||||    
T  5102123 gatagacaaaaactgtttcgagac 5102100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 553992 - 554040
Alignment:
Q  275 tgagggagaatcggagacgattggtgatggagaaaaactgtttggagac 323  Q
    |||| ||||||| |||||||||||||||||| || |||||||| |||||    
T  553992 tgagtgagaatctgagacgattggtgatggataagaactgtttagagac 554040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 1547517 - 1547469
Alignment:
Q  275 tgagggagaatcggagacgattggtgatggagaaaaactgtttggagac 323  Q
    |||| |||||||||||||| |||||||||||||  || |||||||||||    
T  1547517 tgagagagaatcggagacggttggtgatggagaggaattgtttggagac 1547469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 2467676 - 2467724
Alignment:
Q  351 gttgtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaa 399  Q
    |||||||| ||||||||||||||||| ||||||||  |||| |||||||    
T  2467676 gttgtcgttgaggaatttgaagatgcgctcccataactcctttggtaaa 2467724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 2519145 - 2519273
Alignment:
Q  189 ggaaaagagagagatgtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcgg 288  Q
    |||| |||||| ||||| ||| || || | ||| |||||||| || |||||  ||||||||||||||||||||| |    |||||||||  ||| ||||     
T  2519145 ggaagagagagtgatgttgagtgatgtaacgttggggaacctatcaaagagacgatgaaggaaagggattgtttgatctgagattgtgactgaggatcga 2519244  T
Q  289 agacgattggtgatggagaaaaactgttt 317  Q
    | ||| ||||||||||| | |||||||||    
T  2519245 aaacggttggtgatggacagaaactgttt 2519273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 2625491 - 2625451
Alignment:
Q  205 tcgagagaggtgaggttagggaacctttcgaagaggtgatg 245  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  2625491 tcgagggatgtgaggttagggaacctttggaagaggtgatg 2625451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 5035810 - 5035862
Alignment:
Q  354 gtcgtcgaggaatttgaagatgctctcccatatttcctctggtaaacttgaac 406  Q
    ||||| |||||||||||||||| | |||||||  |||||||||||| ||||||    
T  5035810 gtcgttgaggaatttgaagatgttttcccataaatcctctggtaaatttgaac 5035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 6007657 - 6007725
Alignment:
Q  269 agattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatt 337  Q
    |||| ||||| |||||||||||||  |||||||||||||  |||||||| ||||| | ||| |||||||    
T  6007657 agatagtgagagagaatcggagactgttggtgatggagaggaactgtttcgagacgagggagagagatt 6007725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 344
Target Start/End: Complemental strand, 15838095 - 15837955
Alignment:
Q  204 gtcgagagaggtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatg 303  Q
    ||||||||| || |||||||||||||||| |||||||| | ||| |||||||||||||| |     |||| ||||||||||||||||||| |||||||||    
T  15838095 gtcgagagatgttaggttagggaacctttggaagaggttaggaatgaaagggattgtttgatctatgattttgagggagaatcggagacggttggtgatg 15837996  T
Q  304 gagaaaaactgtttggagaccatggaaagagatttgaaagt 344  Q
    |||| |||||||||||||||||| || || || ||||||||    
T  15837995 gagagaaactgtttggagaccatcgagagggacttgaaagt 15837955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 33161430 - 33161479
Alignment:
Q  274 gtgagggagaatcggagacgattggtgatggagaaaaactgtttggagac 323  Q
    ||||| |||||||| |||| ||| |||||||||| |||||||||||||||    
T  33161430 gtgagtgagaatcgaagactattagtgatggagagaaactgtttggagac 33161479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 273 - 399
Target Start/End: Original strand, 39516853 - 39516979
Alignment:
Q  273 tgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatggaaagagatttgaaagtctggttgttgtcgtcgaggaatttgaag 372  Q
    ||||| |||||||| |||||| |||||||||| || ||| ||| ||||||| ||||| ||||| |||||||| |||||||   |||||||||||||||||    
T  39516853 tgtgacggagaatctgagacggttggtgatggcgagaaattgtctggagacgatggagagagacttgaaagtgtggttgtcaccgtcgaggaatttgaag 39516952  T
Q  373 atgctctcccatatttcctctggtaaa 399  Q
    ||   ||||||||| ||||| ||||||    
T  39516953 atagactcccatatatcctccggtaaa 39516979  T

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Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 323
Target Start/End: Complemental strand, 39253025 - 39252916
Alignment:
Q  214 gtgaggttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaact 313  Q
    |||||||| ||||||||||| |||||  || ||||| |||||||||||| |  |  ||||| ||||||| |||||||||| ||| ||||||||| |||||    
T  39253025 gtgaggttggggaacctttcaaagagaagaggaagggaagggattgtttgatcggtgattgcgagggaggatcggagacggttgctgatggagagaaact 39252926  T
Q  314 gtttggagac 323  Q
    || |||||||    
T  39252925 gtatggagac 39252916  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 32268761 - 32268822
Alignment:
Q  268 tagattgtgagggagaatcggagacgattggtgatggagaaaaactgtttggagaccatgga 329  Q
    |||| |||||| |||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  32268761 tagactgtgagagagaatcgaagacggttggtgatggagagtaactgtttggagacgatgga 32268822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 2576513 - 2576415
Alignment:
Q  219 gttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcggagacgattggtgatggagaaaaactgttt 317  Q
    |||||||| ||||||||||||| ||  || ||||||||| |||  |  |  ||||||||  |||||||| ||||||||||||||||| |||||||||||    
T  2576513 gttagggatcctttcgaagaggcgacaaatgaaagggatggttcaatcggtgattgtgaccgagaatcgaagacgattggtgatggataaaaactgttt 2576415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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