View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21182_high_12 (Length: 325)
Name: NF21182_high_12
Description: NF21182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21182_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 32196881 - 32197164
Alignment:
| Q |
13 |
gagatgaacgaaaagctgagaaatacattccaaactacttaggcaatcaggactatttcaatggaaaaaagaagcgtatcttacaatcgttgaacatgta |
112 |
Q |
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| T |
32196881 |
gagacgaacgaaaagctgagaaatacattccaaactacttaggcaatcaggactatttcaatggaaaaaagaagcgtatcttacaatcgttgaacatgta |
32196980 |
T |
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| Q |
113 |
gaaagccatcttctaatgttgtattcgagcacagaactcccgtccacttggatctacatgggtctccgtgactccagctgcttaaatttccattaatatc |
212 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |
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| T |
32196981 |
gaaagccatcttctaatgttgtattcaagcacagaactcccgtccacttggaattacatgggtctccgcgactccagctgctcaaatttccattaatatc |
32197080 |
T |
|
| Q |
213 |
aatcaaattgtcccatatggttctcaatgcgtcaactgcaagttagtgaaaatgaaatgatcatgcgaacaatagagtacattc |
296 |
Q |
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|||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||| ||||||| |
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| T |
32197081 |
aatcaaattgtcccttatggttctcaatgtgtcaactgcaagttagtgaaaataaaatcatcatataaacaatagaatacattc |
32197164 |
T |
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