View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21185_high_6 (Length: 208)
Name: NF21185_high_6
Description: NF21185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21185_high_6 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 4386898 - 4387077
Alignment:
| Q |
12 |
gaaatgaacaaaacattgatgtacttgattaccatatgcaactaagtttcacttggtttaaaattgatgaatcatgaagcacttatttcaaagtggcaca |
111 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4386898 |
gaaatgaacaatatattgatgtacttgattaccatatgcaactaagtttcacttggtttaaaattgatgaatcatgaagcacttatttcaaagtggcaca |
4386997 |
T |
|
| Q |
112 |
tctagatgtagtacttaattatcttacttccattacactaaaataggaaaagaataatggatactggttgactgattttt |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4386998 |
tctagatgtagtacttaattatcttacttccattacactaaaataggaaaagaataatggatactggttgactgattttt |
4387077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University