View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21186_low_6 (Length: 232)

Name: NF21186_low_6
Description: NF21186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21186_low_6
NF21186_low_6
[»] chr2 (30 HSPs)
chr2 (1-102)||(34911881-34911982)
chr2 (2-101)||(45473692-45473791)
chr2 (1-102)||(35423022-35423124)
chr2 (5-102)||(3078953-3079050)
chr2 (1-102)||(9922262-9922363)
chr2 (1-102)||(20642678-20642780)
chr2 (1-102)||(37521924-37522025)
chr2 (5-102)||(13552639-13552735)
chr2 (6-101)||(669075-669171)
chr2 (1-91)||(38878370-38878459)
chr2 (1-101)||(2179289-2179389)
chr2 (1-91)||(17033571-17033661)
chr2 (1-91)||(17051899-17051989)
chr2 (15-102)||(38708946-38709034)
chr2 (1-102)||(32291643-32291744)
chr2 (8-102)||(9800249-9800344)
chr2 (8-102)||(1996622-1996718)
chr2 (8-102)||(6346415-6346511)
chr2 (8-102)||(14326893-14326989)
chr2 (1-72)||(10119842-10119913)
chr2 (8-102)||(28498823-28498919)
chr2 (1-102)||(7273904-7274007)
chr2 (8-102)||(1996101-1996196)
chr2 (8-102)||(14326373-14326468)
chr2 (8-102)||(28499345-28499440)
chr2 (8-102)||(24521238-24521330)
chr2 (12-82)||(42882919-42882989)
chr2 (12-102)||(36635182-36635274)
chr2 (47-102)||(18095225-18095281)
chr2 (47-102)||(18097703-18097759)
[»] chr5 (39 HSPs)
chr5 (1-102)||(42112468-42112569)
chr5 (1-100)||(8314090-8314190)
chr5 (1-102)||(28747055-28747157)
chr5 (1-102)||(43395738-43395840)
chr5 (1-91)||(16167007-16167097)
chr5 (1-102)||(19360908-19361009)
chr5 (1-86)||(790802-790887)
chr5 (1-100)||(3244725-3244825)
chr5 (1-102)||(2529306-2529408)
chr5 (1-102)||(30511051-30511153)
chr5 (1-102)||(30551391-30551493)
chr5 (1-102)||(37146293-37146392)
chr5 (1-102)||(10042023-10042123)
chr5 (1-100)||(7535889-7535989)
chr5 (1-102)||(20338999-20339098)
chr5 (1-102)||(789753-789854)
chr5 (1-100)||(36241564-36241664)
chr5 (6-84)||(29383356-29383434)
chr5 (8-100)||(42415937-42416030)
chr5 (8-102)||(2462883-2462979)
chr5 (11-102)||(35381172-35381264)
chr5 (8-68)||(36087847-36087907)
chr5 (8-66)||(36083072-36083130)
chr5 (1-102)||(39781783-39781882)
chr5 (7-91)||(43353343-43353427)
chr5 (8-102)||(19391903-19391998)
chr5 (7-102)||(9698247-9698344)
chr5 (8-102)||(33709120-33709213)
chr5 (58-102)||(9812710-9812754)
chr5 (58-102)||(12704852-12704896)
chr5 (58-102)||(12765969-12766013)
chr5 (7-82)||(7867259-7867334)
chr5 (8-102)||(19392399-19392494)
chr5 (12-102)||(20997914-20998005)
chr5 (8-102)||(31298706-31298801)
chr5 (8-102)||(37460870-37460965)
chr5 (12-82)||(3153385-3153455)
chr5 (62-102)||(287609-287649)
chr5 (8-100)||(31959532-31959627)
[»] chr4 (49 HSPs)
chr4 (1-100)||(40849022-40849121)
chr4 (1-102)||(43116746-43116847)
chr4 (1-102)||(51152800-51152901)
chr4 (3-91)||(11180154-11180242)
chr4 (1-91)||(8150453-8150543)
chr4 (5-102)||(17975682-17975779)
chr4 (1-102)||(18003140-18003242)
chr4 (5-102)||(18137572-18137669)
chr4 (5-102)||(49124780-49124877)
chr4 (1-100)||(46046883-46046983)
chr4 (1-91)||(26098393-26098483)
chr4 (1-100)||(37874316-37874416)
chr4 (1-98)||(49909064-49909161)
chr4 (1-100)||(20680439-20680539)
chr4 (1-100)||(9752564-9752663)
chr4 (1-84)||(22556474-22556557)
chr4 (7-102)||(40951312-40951407)
chr4 (1-84)||(41145245-41145328)
chr4 (6-100)||(29100370-29100463)
chr4 (14-91)||(52619882-52619959)
chr4 (7-102)||(29347928-29348021)
chr4 (8-99)||(9100623-9100714)
chr4 (7-102)||(15517328-15517425)
chr4 (8-102)||(743994-744090)
chr4 (10-91)||(23627529-23627610)
chr4 (1-66)||(39656965-39657030)
chr4 (7-82)||(33505749-33505824)
chr4 (7-102)||(35832986-35833081)
chr4 (8-85)||(24631432-24631509)
chr4 (46-102)||(51186972-51187029)
chr4 (58-102)||(16896484-16896528)
chr4 (9-100)||(47723565-47723657)
chr4 (1-64)||(10582675-10582738)
chr4 (8-102)||(13859583-13859678)
chr4 (8-102)||(15517851-15517946)
chr4 (8-94)||(28362240-28362324)
chr4 (8-102)||(53340484-53340579)
chr4 (1-91)||(2414129-2414219)
chr4 (12-82)||(22117148-22117218)
chr4 (12-82)||(34059399-34059469)
chr4 (8-66)||(45474331-45474389)
chr4 (8-102)||(35715843-35715938)
chr4 (1-65)||(347363-347427)
chr4 (58-102)||(1940999-1941042)
chr4 (47-102)||(5754171-5754227)
chr4 (58-102)||(13626311-13626355)
chr4 (8-91)||(17730878-17730959)
chr4 (58-102)||(17736092-17736136)
chr4 (47-99)||(36854402-36854454)
[»] chr6 (27 HSPs)
chr6 (1-102)||(174725-174827)
chr6 (6-102)||(8691199-8691295)
chr6 (1-100)||(34248463-34248562)
chr6 (1-101)||(34207751-34207852)
chr6 (5-102)||(19988168-19988265)
chr6 (5-102)||(7540659-7540758)
chr6 (1-91)||(29042478-29042569)
chr6 (1-102)||(10944965-10945067)
chr6 (1-91)||(17504719-17504809)
chr6 (1-75)||(29975574-29975647)
chr6 (8-102)||(13460416-13460512)
chr6 (8-100)||(6832684-6832776)
chr6 (10-102)||(18313163-18313256)
chr6 (58-102)||(8612199-8612243)
chr6 (8-102)||(1930233-1930328)
chr6 (12-82)||(2518513-2518584)
chr6 (7-82)||(5760380-5760455)
chr6 (7-82)||(7220825-7220900)
chr6 (7-82)||(8611327-8611402)
chr6 (8-102)||(13459896-13459991)
chr6 (8-71)||(29864036-29864099)
chr6 (8-102)||(34317381-34317476)
chr6 (12-82)||(14890813-14890883)
chr6 (12-82)||(21796867-21796937)
chr6 (1-31)||(34248558-34248588)
chr6 (62-102)||(1929545-1929585)
chr6 (7-102)||(28193341-28193437)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-102)||(138703-138804)
[»] chr1 (36 HSPs)
chr1 (1-102)||(17367130-17367231)
chr1 (1-102)||(24474294-24474395)
chr1 (5-102)||(39729949-39730046)
chr1 (7-102)||(43119891-43119986)
chr1 (1-101)||(49570458-49570560)
chr1 (9-102)||(34077557-34077651)
chr1 (1-100)||(39879861-39879961)
chr1 (1-102)||(37824778-37824880)
chr1 (1-102)||(36953388-36953489)
chr1 (1-100)||(34651527-34651627)
chr1 (8-102)||(43123489-43123584)
chr1 (1-86)||(1323270-1323355)
chr1 (7-102)||(43116470-43116565)
chr1 (5-102)||(8946750-8946848)
chr1 (8-102)||(18108189-18108285)
chr1 (8-100)||(21966757-21966850)
chr1 (8-102)||(43258236-43258332)
chr1 (8-102)||(50398650-50398746)
chr1 (8-82)||(17669159-17669232)
chr1 (7-102)||(28627408-28627505)
chr1 (8-100)||(31639269-31639362)
chr1 (8-102)||(23647043-23647136)
chr1 (7-91)||(41918523-41918607)
chr1 (8-102)||(18108710-18108805)
chr1 (8-102)||(23911855-23911950)
chr1 (8-102)||(43257716-43257811)
chr1 (8-102)||(47391609-47391704)
chr1 (8-102)||(50398130-50398225)
chr1 (8-82)||(11607402-11607476)
chr1 (12-82)||(18811583-18811653)
chr1 (2-64)||(33932169-33932231)
chr1 (12-82)||(40794604-40794674)
chr1 (8-102)||(50558265-50558357)
chr1 (48-102)||(50558848-50558902)
chr1 (8-102)||(10697695-10697790)
chr1 (8-102)||(10702584-10702679)
[»] chr8 (32 HSPs)
chr8 (1-102)||(14451232-14451333)
chr8 (5-101)||(38139497-38139593)
chr8 (1-91)||(35003402-35003492)
chr8 (1-86)||(12262070-12262154)
chr8 (1-98)||(36060007-36060104)
chr8 (1-100)||(6746393-6746493)
chr8 (1-91)||(6656686-6656776)
chr8 (1-91)||(6737088-6737178)
chr8 (1-102)||(41525555-41525656)
chr8 (9-100)||(39524694-39524786)
chr8 (1-84)||(37034056-37034139)
chr8 (9-91)||(39486778-39486860)
chr8 (25-99)||(45139802-45139876)
chr8 (1-100)||(42983234-42983334)
chr8 (8-102)||(6304160-6304256)
chr8 (8-102)||(23970072-23970168)
chr8 (7-96)||(39140863-39140951)
chr8 (8-102)||(42065134-42065230)
chr8 (8-102)||(44936782-44936878)
chr8 (1-52)||(12262011-12262062)
chr8 (8-102)||(19243652-19243746)
chr8 (8-102)||(19316836-19316930)
chr8 (1-94)||(40049452-40049545)
chr8 (8-100)||(44654188-44654281)
chr8 (8-102)||(6303637-6303732)
chr8 (8-102)||(23969552-23969647)
chr8 (8-102)||(42064613-42064708)
chr8 (8-102)||(44388551-44388645)
chr8 (8-102)||(44937303-44937398)
chr8 (12-82)||(33427071-33427141)
chr8 (12-82)||(41626028-41626098)
chr8 (1-29)||(45139904-45139932)
[»] chr7 (43 HSPs)
chr7 (1-91)||(23153892-23153982)
chr7 (5-102)||(47839967-47840064)
chr7 (1-102)||(41344034-41344137)
chr7 (1-91)||(5482689-5482779)
chr7 (1-100)||(35909529-35909629)
chr7 (1-91)||(4493100-4493190)
chr7 (1-102)||(40036760-40036862)
chr7 (1-102)||(5484611-5484712)
chr7 (8-102)||(5525339-5525434)
chr7 (1-100)||(16934174-16934273)
chr7 (1-100)||(16939557-16939656)
chr7 (1-102)||(44652606-44652708)
chr7 (8-100)||(44550430-44550523)
chr7 (1-102)||(37311119-37311221)
chr7 (34-102)||(4407313-4407382)
chr7 (8-102)||(6915044-6915140)
chr7 (27-84)||(21135142-21135199)
chr7 (8-102)||(47577021-47577117)
chr7 (7-102)||(17815029-17815125)
chr7 (7-102)||(19051859-19051955)
chr7 (8-102)||(47169107-47169202)
chr7 (8-66)||(4409181-4409239)
chr7 (12-82)||(5693840-5693910)
chr7 (8-102)||(21893701-21893795)
chr7 (7-102)||(38437572-38437669)
chr7 (1-74)||(36759033-36759105)
chr7 (1-74)||(36764801-36764873)
chr7 (8-91)||(4495084-4495167)
chr7 (8-102)||(6914524-6914619)
chr7 (8-75)||(42830043-42830110)
chr7 (8-102)||(47576501-47576596)
chr7 (8-102)||(9144439-9144532)
chr7 (12-82)||(14306268-14306338)
chr7 (12-82)||(17466765-17466835)
chr7 (12-82)||(17586379-17586449)
chr7 (7-100)||(22992732-22992824)
chr7 (8-102)||(27737327-27737422)
chr7 (47-102)||(689786-689842)
chr7 (8-68)||(4409880-4409940)
chr7 (11-91)||(11840012-11840091)
chr7 (11-91)||(21600535-21600614)
chr7 (7-102)||(34126899-34126995)
chr7 (7-75)||(36768459-36768526)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-102)||(111236-111338)
[»] chr3 (43 HSPs)
chr3 (1-102)||(47718761-47718863)
chr3 (1-102)||(35530548-35530650)
chr3 (1-91)||(38360955-38361045)
chr3 (1-102)||(39720476-39720581)
chr3 (5-102)||(47671202-47671299)
chr3 (1-102)||(50738404-50738507)
chr3 (1-102)||(50774348-50774451)
chr3 (1-91)||(35907533-35907623)
chr3 (6-102)||(20997077-20997173)
chr3 (6-102)||(46090856-46090952)
chr3 (7-102)||(15497176-15497270)
chr3 (8-91)||(33899114-33899197)
chr3 (1-101)||(43317589-43317689)
chr3 (6-91)||(34434829-34434913)
chr3 (8-102)||(36170965-36171060)
chr3 (9-102)||(12102214-12102308)
chr3 (12-102)||(23190931-23191021)
chr3 (8-102)||(36171650-36171744)
chr3 (8-102)||(39800032-39800128)
chr3 (8-100)||(46851700-46851793)
chr3 (8-102)||(12175507-12175602)
chr3 (8-102)||(12176198-12176291)
chr3 (12-82)||(35090672-35090742)
chr3 (8-102)||(52468901-52468995)
chr3 (8-100)||(10614880-10614973)
chr3 (58-102)||(15320023-15320067)
chr3 (8-102)||(915261-915356)
chr3 (7-102)||(5238377-5238471)
chr3 (8-102)||(16339800-16339895)
chr3 (8-102)||(28981362-28981457)
chr3 (8-102)||(39799512-39799607)
chr3 (8-102)||(40831474-40831568)
chr3 (7-66)||(50931968-50932027)
chr3 (12-82)||(6107737-6107807)
chr3 (8-66)||(42188990-42189048)
chr3 (8-102)||(8393977-8394072)
chr3 (34-102)||(13166064-13166133)
chr3 (58-102)||(54196711-54196756)
chr3 (47-102)||(8395288-8395344)
chr3 (47-102)||(18684209-18684265)
chr3 (11-91)||(22519634-22519713)
chr3 (47-102)||(32752443-32752499)
chr3 (58-102)||(55296938-55296982)
[»] scaffold0198 (1 HSPs)
scaffold0198 (8-100)||(17834-17927)
[»] scaffold0283 (2 HSPs)
scaffold0283 (8-102)||(8122-8218)
scaffold0283 (8-102)||(8643-8738)
[»] scaffold0376 (1 HSPs)
scaffold0376 (58-102)||(12510-12554)
[»] scaffold0006 (2 HSPs)
scaffold0006 (7-91)||(157529-157613)
scaffold0006 (58-102)||(68358-68401)
[»] scaffold1793 (1 HSPs)
scaffold1793 (8-100)||(1048-1142)
[»] scaffold0237 (1 HSPs)
scaffold0237 (8-71)||(19731-19794)
[»] scaffold0020 (1 HSPs)
scaffold0020 (8-66)||(123989-124047)
[»] scaffold0010 (1 HSPs)
scaffold0010 (8-82)||(36535-36609)
[»] scaffold0002 (1 HSPs)
scaffold0002 (34-102)||(140855-140924)


Alignment Details
Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34911881 - 34911982
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  34911881 tctctgtaatttatttcacaagcacttctcttcaactcacgcaagcaaccttatcttttattttttaatattatatttcaatttgttttttcttccattt 34911980  T
Q  101 aa 102  Q
    ||    
T  34911981 aa 34911982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 45473692 - 45473791
Alignment:
Q  2 ctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattta 101  Q
    ||||| |||||||||||||||||||| |||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  45473692 ctctgcaatttatttcacaagcacttttcttcaactcacgcatgcaaccttatcttttattttttaatattatatttcaatttgttttttcttccattta 45473791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35423022 - 35423124
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| || |||||| | ||||||||||||    
T  35423022 tctctgtaatttatctcacaagcacttctcttcaactcacgcagtcaaccttatcttttattttttaatattatattttaatttgtttttttcttccatt 35423121  T
Q  100 taa 102  Q
    |||    
T  35423122 taa 35423124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 3078953 - 3079050
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||||||| |||| |||| |||||  |||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  3078953 tgtaatttatttcacaagcacttttcttcaactaacgcatgcaactttatcttttattttttaatattatatttcaatttgttttttcttccatttaa 3079050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9922363 - 9922262
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctctta-ttttttaatattatacttcaatttgtcttttcttccatt 99  Q
    ||||||||||||||||||||||||||| |||| |||||| ||| |||||||||||| ||| ||||||||||||||| |||||||| | ||||||||||||    
T  9922363 tctctgtaatttatttcacaagcacttatcttcaactcatgcagacaaccttatcttttatttttttaatattatatttcaattt-ttttttcttccatt 9922265  T
Q  100 taa 102  Q
    |||    
T  9922264 taa 9922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20642780 - 20642678
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||| || |||| ||||||||||   |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  20642780 tctctgtaatttatttcacaagcatttatcttcaactcacgcagggaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 20642681  T
Q  100 taa 102  Q
    |||    
T  20642680 taa 20642678  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37521924 - 37522025
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||  |||| || ||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  37521924 tctctgtaatttatttcacaagcacttctcttcaactcacgcaggcaacatt-tcttttattttttaatattatatttcaatttgtttttttcttccatt 37522022  T
Q  100 taa 102  Q
    |||    
T  37522023 taa 37522025  T

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Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13552735 - 13552639
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||||||| | |||||||||||||||||| |||||||||| |||||||| ||||||    
T  13552735 tgtaatttatttcacaagcactcctcttcaactcacgcag-caaccttatattttattttttaatattatatttcaatttgttttttcttcaatttaa 13552639  T

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Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 669171 - 669075
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattta 101  Q
    |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||| | ||||||||||||||    
T  669171 gtaatttatttcacaagcacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaatttgtttttttcttccattta 669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38878370 - 38878459
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||||||||||||||| |||||||| |  ||||||||||| ||| |||||||||||||| |||||||||| ||||    
T  38878370 tctctgtaatttatttcacaagcacttctcttcaactcacgtaggcaaccttatctttta-tttttaatattatatttcaatttgtttttt 38878459  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2179289 - 2179389
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||  ||| || || ||||||| |||||||| ||| |||||||||||||||||| |||||||| | |||||||||||||    
T  2179289 tctccgtaatttatttcacaagcatctctattcaattcacgcagacaaccttttcttttattttttaatattatatttcaatttattttttcttccattt 2179388  T
Q  101 a 101  Q
    |    
T  2179389 a 2179389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17033661 - 17033571
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||  ||||||||||| |||||||||||||||||| || ||||||| ||||    
T  17033661 tctctataatttatttcacaagcacttcccttcaactcaagcaggcaaccttatcttttattttttaatattatattttaatttgtttttt 17033571  T

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Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17051989 - 17051899
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||  ||||||||||| |||||||||||||||||| || ||||||| ||||    
T  17051989 tctctataatttatttcacaagcacttcccttcaactcaagcaggcaaccttatcttttattttttaatattatattttaatttgtttttt 17051899  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 38708946 - 38709034
Alignment:
Q  15 ttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||| |||| |||||||| | ||||||| |||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  38708946 ttcacaagcacttatcttcaactcacggagacaacctcatcttttattttttaatattatatttcaatttgtttttttcttccatttaa 38709034  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32291643 - 32291744
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| ||||||||||||||||||   ||| || ||||||||   | |||||| ||| |||||||||||||||||| |||||||||| |||||||||||||    
T  32291643 tctccgtaatttatttcacaagcgtctctattcaactcacgttgataaccttttcttttattttttaatattatatttcaatttgttttttcttccattt 32291742  T
Q  101 aa 102  Q
    ||    
T  32291743 aa 32291744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 9800344 - 9800249
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| |||||||    |||||||| ||| |||||||||||||||||| |||||||||  | |||||||||||||||    
T  9800344 aatttatttcacaagcacctctcttcaactcacattgacaaccttttct-ttattttttaatattatatttcaatttgttttttttcttccatttaa 9800249  T

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Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 1996718 - 1996622
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  1996718 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 1996622  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 6346511 - 6346415
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  6346511 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 6346415  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 14326989 - 14326893
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  14326989 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 14326893  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10119842 - 10119913
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatatt 72  Q
    |||| |||||||||||||||||||| |||||| || |||||||  ||||| | ||| |||||||||||||||    
T  10119842 tctccgtaatttatttcacaagcacctctcttcaattcacgcaggcaaccatttcttttattttttaatatt 10119913  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28498823 - 28498919
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||| ||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  28498823 aatttatttcacaaacacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 28498919  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7273904 - 7274007
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccat 98  Q
    |||||| |||||||||||||| ||| |||||| ||||||| |   |||| |  ||| |||||||||||||||||| | |||||||  | |||||||||||    
T  7273904 tctctgcaatttatttcacaaacacctctcttcaactcacacgggcaacatattcttttattttttaatattatattccaatttgttttttttcttccat 7274003  T
Q  99 ttaa 102  Q
    ||||    
T  7274004 ttaa 7274007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 1996196 - 1996101
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  1996196 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 1996101  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 14326468 - 14326373
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  14326468 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 14326373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28499345 - 28499440
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  28499345 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 28499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 24521238 - 24521330
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||  | || ||| ||| |||||||||||||||||| |||||| ||| |||| ||||||||||    
T  24521238 aatttatttcacaaacacctctgttcaactcacgctgagaatcttttct-ttattttttaatattatatttcaatatgt-tttttttccatttaa 24521330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 42882919 - 42882989
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  42882919 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 42882989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 36635274 - 36635182
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| ||||||| |||||||||| |||||| ||  | |||||||||||||||    
T  36635274 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttctaatattatatttcaatatgttttttttcttccatttaa 36635182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 18095281 - 18095225
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  18095281 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 18095225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 18097703 - 18097759
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  18097703 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 18097759  T

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Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42112569 - 42112468
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||| | |||||||||||||    
T  42112569 tctctgtaatttatttcacaagcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaattttttttttcttccattt 42112470  T
Q  101 aa 102  Q
    ||    
T  42112469 aa 42112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8314090 - 8314190
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  8314090 tctctgtaatttatttcacaaacacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 8314189  T
Q  100 t 100  Q
    |    
T  8314190 t 8314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28747157 - 28747055
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    ||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||| ||||| |||||||||| ||| |||||||||    
T  28747157 tctctctaatttatttcacaagcacttctcttcaattcacgcagacaaccttatcttttattttttaatgttatatttcaatttgtttttctcttccatt 28747058  T
Q  100 taa 102  Q
    |||    
T  28747057 taa 28747055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43395738 - 43395840
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  43395738 tctctgtgatttatttcacaatcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 43395837  T
Q  100 taa 102  Q
    |||    
T  43395838 taa 43395840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16167097 - 16167007
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  16167097 tctccgtaatttatttcacaagcacctctcttcaactcacgcatacaaccttttcttttattttttaatattatatttcaatttgtttttt 16167007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19360908 - 19361009
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  19360908 tctctgtcatttatttcacaaacacttctcttcaactcacacaa-caaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 19361006  T
Q  100 taa 102  Q
    |||    
T  19361007 taa 19361009  T

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Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 790887 - 790802
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgt 86  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||| | |||||||||||||||| ||||||||||    
T  790887 tctctataatttatttcacaagcacttctcttcaactcacgcaggcaaccttatctttaattttttaatattatatttcaatttgt 790802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3244725 - 3244825
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||  |||||||||| ||| |||||||||    
T  3244725 tctccgtaatttatttcacaagcacctctcttcaactcacgcagacaaccttttcttttattttttaatattatttttcaatttgtttttgtcttccatt 3244824  T
Q  100 t 100  Q
    |    
T  3244825 t 3244825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2529306 - 2529408
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||  | ||||||||||||    
T  2529306 tctccgtaatttatttcacaagcacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaatttatttttttcttccatt 2529405  T
Q  100 taa 102  Q
    |||    
T  2529406 taa 2529408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30511153 - 30511051
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||| ||  ||||||||| | |||||||||||||||||| ||  ||||| | ||||||||||||    
T  30511153 tctctgtaatttatttcacaagcacttctcttcaactcacacaggcaaccttatattttattttttaatattatattttgatttgtttttttcttccatt 30511054  T
Q  100 taa 102  Q
    |||    
T  30511053 taa 30511051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30551493 - 30551391
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||| ||  ||||||||| | |||||||||||||||||| ||  ||||| | ||||||||||||    
T  30551493 tctctgtaatttatttcacaagcacttctcttcaactcacacaggcaaccttatattttattttttaatattatattttgatttgtttttttcttccatt 30551394  T
Q  100 taa 102  Q
    |||    
T  30551393 taa 30551391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37146293 - 37146392
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||  |||||||||||| ||||||||||  ||||| ||| | |||||||||||||||||| |||||||||| |||||||||||||    
T  37146293 tctcagtaatttatttca--agcacttctcttcaactcacgcaggcaaccctatattttattttttaatattatatttcaatttgttttttcttccattt 37146390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10042023 - 10042123
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| ||||||||||||||||| || |||||| |||| |||||| ||||||| ||| |||||||||||||||||| |||||||| | |||||||||||||    
T  10042023 tctccgtaatttatttcacaagtacatctcttcaactaacgcaagcaaccttttcttttattttttaatattatatttcaattt-ttttttcttccattt 10042121  T
Q  101 aa 102  Q
    ||    
T  10042122 aa 10042123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7535889 - 7535989
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||||| ||| |||||||||    
T  7535889 tctccgtaatttatttcacaagcacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaatttgtttttgtcttccatt 7535988  T
Q  100 t 100  Q
    |    
T  7535989 t 7535989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20338999 - 20339098
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||| |||||| |||||||||   ||||||| ||| |||||||||||||||||| |||||||  | |||||||||||||    
T  20338999 tctccgtaatttatttcacaagcacctctcttcaactcacgctggcaaccttttcttttattttttaatattatatttcaatt--ttttttcttccattt 20339096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 789854 - 789753
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||||||  ||||||| ||| |||||||||||||||||| |||||||||| ||||||  |||||    
T  789854 tctccgtaatttatttcacaagcatctctatttaattcacgcaggcaaccttttcttttattttttaatattatatttcaatttgttttttctctcattt 789755  T
Q  101 aa 102  Q
    ||    
T  789754 aa 789753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36241564 - 36241664
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| ||||||||||   |||||| ||| |||||||||||||||||  ||||||||| | ||||||||||||    
T  36241564 tctccgtaatttatttcacaagcacctctcttcaactcacgcaggtaaccttttcttttattttttaatattatttttcaatttgtttttttcttccatt 36241663  T
Q  100 t 100  Q
    |    
T  36241664 t 36241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 29383434 - 29383356
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt 84  Q
    |||||||||||||||| ||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  ||||||||    
T  29383434 gtaatttatttcacaaacacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaattt 29383356  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 42415937 - 42416030
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    |||||||||||||| ||| |||||| |||||| ||   ||||||| ||| |||||||||||||||||| ||||||||| | |||||||||||||    
T  42415937 aatttatttcacaatcacctctcttcaactcatgctcgcaaccttttcttttattttttaatattatatttcaatttgtttttttcttccattt 42416030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 2462883 - 2462979
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatc-tcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||| |||||||||||||| |||||   || ||||||||||| | |||||||||||||||||| || |||||| | |||||||||||||||    
T  2462883 aatttatttcgcaagcacttctcttcaactcgttcagacaaccttatctttttattttttaatattatattttaatttgtttttttcttccatttaa 2462979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 35381264 - 35381172
Alignment:
Q  11 ttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||||| |||||| || ||||||  |||| ||| ||| ||||||||||||||| || ||||||||| | |||||||||||||||    
T  35381264 ttatttcacaagcacctctcttcaattcacgctgacaatcttttcttttattttttaatattgtatttcaatttgcttttttcttccatttaa 35381172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 36087847 - 36087907
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaa 68  Q
    |||||||||||||||||| ||||||||||||||||  |||||||| ||| |||||||||||    
T  36087847 aatttatttcacaagcacatctctttaactcacgctgacaaccttttcttttattttttaa 36087907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 36083072 - 36083130
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    |||||||||||||||||| ||||||||||||||||  |||||||| ||| |||||||||    
T  36083072 aatttatttcacaagcacatctctttaactcacgctgacaaccttttcttttatttttt 36083130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39781783 - 39781882
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||  |||||| |||||| |   |||||||| | |  ||||||||||||||||| |||||||||  |||||||||||||    
T  39781783 tctcggtaatttatttcacaagcatctctcttcaactcatgttgacaacctttttt--tattttttaatattatatttcaatttgctttttcttccattt 39781880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 43353343 - 43353427
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||||||||| |||||| |||| ||||    |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  43353343 taatttatttcacaagcacctctcttcaactaacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttt 43353427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19391903 - 19391998
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| ||| | ||||||||||    |||||| ||| ||||| |||||||||||| |||||| || | |||||||||||||||    
T  19391903 aatttatttcacaagcacctctttctaactcacgcttggaaccttttcttttattgtttaatattatatttcaatatgtttttttcttccatttaa 19391998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 9698247 - 9698344
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    ||||||||||||||||||| | | || |||||||||    |||||| ||| ||||||| |||||||||| |||||||||  | |||||||||||||||    
T  9698247 taatttatttcacaagcaccttttttgaactcacgctgggaaccttttcttttattttataatattatatttcaatttgttttttttcttccatttaa 9698344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 33709213 - 33709120
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| | | |||||||||||||||    
T  33709213 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatattttttcttccatttaa 33709120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 9812754 - 9812710
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  9812754 ttattttttaatattatatttcaatatgttttttcttccatttaa 9812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 12704896 - 12704852
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  12704896 ttattttttaatattatatttcaatatgttttttcttccatttaa 12704852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 12766013 - 12765969
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  12766013 ttattttttaatattatatttcaatatgttttttcttccatttaa 12765969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 7867334 - 7867259
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||||||| ||||||| || |||||||||    ||| || ||| |||||||||||||||||| ||||||    
T  7867334 taatttatttcacaaacacttcttttcaactcacgctgggaacattttcttttattttttaatattatatttcaat 7867259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19392399 - 19392494
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  19392399 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 19392494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 20998005 - 20997914
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| ||||||| |||||||||| |||||| || | |||||||||||||||    
T  20998005 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttataatattatatttcaatatgtttttttcttccatttaa 20997914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 31298801 - 31298706
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  31298801 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 31298706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 37460870 - 37460965
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat-ttgtcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || |||||     |||||| ||| ||||||||||||||||||||||||| |  | |||||||||||||||    
T  37460870 aatttatttcacaagcatctctcttcaattcacgttgggaaccttttcttttattttttaatattatacttcaatatatttttttcttccatttaa 37460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 3153455 - 3153385
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||  | |||||| ||| ||||||||| |||||||| ||||||    
T  3153455 tatttcacaagcacctcttttcaactcacgctgagaaccttttcttttatttttttatattatatttcaat 3153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 287609 - 287649
Alignment:
Q  62 tttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  287609 tttttaatattatatttcaatatgttttttcttccatttaa 287649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31959627 - 31959532
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctctt--attttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    ||||||||| |||||||  |||||| |||||| |  ||||||||| | | ||  |||||||||||||||| ||||||||| | |||||||||||||    
T  31959627 aatttatttgacaagcatctctcttcaactcatgataacaaccttttttattttattttttaatattatatttcaatttgcttttttcttccattt 31959532  T

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Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40849022 - 40849121
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||||||| |||||||||| |||||||||||||    
T  40849022 tctctgtaatttatttcacaagcacttctcttcaactcacgcaggcaaccttatcttttattctttaatattatatttcaatttgttttttcttccattt 40849121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43116746 - 43116847
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||| | |||||||||||||    
T  43116746 tctctttaatttatttcacaagcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttattttttcttccattt 43116845  T
Q  101 aa 102  Q
    ||    
T  43116846 aa 43116847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 51152800 - 51152901
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||    
T  51152800 tctctgtaatttatttcccaaacacttctcttcaactcacgcaagcaaccttatcttttatttgttaatattatatttcaatttgttttttcttccattt 51152899  T
Q  101 aa 102  Q
    ||    
T  51152900 aa 51152901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 11180154 - 11180242
Alignment:
Q  3 tctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||    
T  11180154 tctgtaatttatttcacaagcacttctcttcaactcacgcagacaaccttatcttttattttttaatattatatttcaatttgtttttt 11180242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8150453 - 8150543
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  8150453 tctctgtaatttatttcacaaacacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttt 8150543  T

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Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 17975682 - 17975779
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||||||| |||| |||| |||||  |||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  17975682 tgtaatttatttcacaagcacttttcttcaactaacgcatgcaactttatcttttattttttaatattatatttcaatttgttttttcttccatttaa 17975779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18003242 - 18003140
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||| || |||| ||||||||||   |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  18003242 tctctgtaatttatttcacaagcatttatcttcaactcacgcagggaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 18003143  T
Q  100 taa 102  Q
    |||    
T  18003142 taa 18003140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 18137572 - 18137669
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||||  ||| || || ||||||| |||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  18137572 tgtaatttatttcacaagcatctctattcaattcacgcatacaaccttttcttttattttttaatattatatttcaatttgttttttcttccatttaa 18137669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 49124780 - 49124877
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||||  ||| || || ||||||| |||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  49124780 tgtaatttatttcacaagcatctctattcaattcacgcatacaaccttttcttttattttttaatattatatttcaatttgttttttcttccatttaa 49124877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46046983 - 46046883
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| || |||||| | ||||||||||||    
T  46046983 tctctttaatttatttcacaagtacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatattttaatttgtttttttcttccatt 46046884  T
Q  100 t 100  Q
    |    
T  46046883 t 46046883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26098483 - 26098393
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||||||||| || ||||||| ||||    
T  26098483 tctctgtaatttatttcacaagcacttctcttcaactcatgcgggcaaccttatcttttattttttaatattatattttaatttgtttttt 26098393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37874416 - 37874316
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||||| ||| |||||||||    
T  37874416 tctccgtaatttatttcacaagcacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaatttgtttttgtcttccatt 37874317  T
Q  100 t 100  Q
    |    
T  37874316 t 37874316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 49909064 - 49909161
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccat 98  Q
    |||| |||||||||||||||||||| |||||| ||||||||   |||||||| ||| |||||||||||||||||| |||||||| | |||| ||||||    
T  49909064 tctccgtaatttatttcacaagcacctctcttcaactcacgttgacaaccttttcttttattttttaatattatatttcaatttttttttttttccat 49909161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20680439 - 20680539
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||| | ||| |||||||||    
T  20680439 tctccgtaatttatttcacaagcacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatttttcaatttatttttgtcttccatt 20680538  T
Q  100 t 100  Q
    |    
T  20680539 t 20680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9752564 - 9752663
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||  ||| || |  |||||||  ||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||    
T  9752564 tctccgtaatttatttcacaagcatctctattcatttcacgcaggcaaccttttcttttattttttaatattatatttcaatttgttttttcttccattt 9752663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22556474 - 22556557
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt 84  Q
    |||| |||||||||||||||| || ||||||| ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||    
T  22556474 tctccgtaatttatttcacaaacaattctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaattt 22556557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 40951312 - 40951407
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||  ||| || || |||||||  |||| || ||| |||||||||||||||||| |||| ||||| |||||||||||||||    
T  40951312 taatttatttcacaagcatctctattcaattcacgcaggcaacattttcttttattttttaatattatatttcagtttgttttttcttccatttaa 40951407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41145328 - 41145245
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt 84  Q
    |||| |||||||||||||||||||| |||||| |||||||||  |||| ||| ||| |||||||| ||||||||| ||||||||    
T  41145328 tctccgtaatttatttcacaagcacctctcttcaactcacgctgacaatcttttcttttatttttaaatattatatttcaattt 41145245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 29100463 - 29100370
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||| ||  |||||| |||||||||| |||||||| ||| |||||||||||||||||  |||||||| | ||||||| |||||    
T  29100463 gtaatttatttcacaaacatctctcttcaactcacgcagacaaccttttcttttattttttaatattat-tttcaatttattttttctttcattt 29100370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 52619882 - 52619959
Alignment:
Q  14 tttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| |||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  52619882 tttcataagcacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaatttgtttttt 52619959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 29348021 - 29347928
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||| |||||  ||||||| | |  |||||| ||| |||||||||||||||||| |||||||  | |||||||||||||||    
T  29348021 taatttatttcacaagcacctctctacaactcacactaggaaccttttcttttattttttaatattatatttcaatt--ttttttcttccatttaa 29347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 9100714 - 9100623
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatt 99  Q
    |||||||||||||||||| ||  || |||||||||  | |||||| ||| |||||||||||||||||| |||||| | | ||||||||||||    
T  9100714 aatttatttcacaagcacctcatttcaactcacgctgagaaccttttcttttattttttaatattatatttcaatattttttttcttccatt 9100623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 15517328 - 15517425
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    ||||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  15517328 taatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 15517425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 744090 - 743994
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  744090 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 743994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 23627529 - 23627610
Alignment:
Q  10 tttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||| || ||||||  ||||||||  |||||||| ||| |||||||||||||||||| || ||||||| ||||    
T  23627529 tttatttcacaagtacctctcttcgactcacgctgacaaccttttcttttattttttaatattataatttaatttgtttttt 23627610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39656965 - 39657030
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||  ||||||||||| |||||||||    
T  39656965 tctctgtgatttatttcacaaatacttctcttcaactcacgcaggcaaccttatcttttatttttt 39657030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 33505824 - 33505749
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||||||||||| |||||| |||||||||    |||||| ||| |||| ||||||||||||| ||||||    
T  33505824 taatttatttcacaagcacctctcttcaactcacgctgtgaaccttttcttttatgttttaatattatatttcaat 33505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 35833081 - 35832986
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||  |||||| ||||||||     |||||| ||| |||||||||||||||||| |||||| | | ||||| |||||||||    
T  35833081 taatttatttcacaagcatctctcttcaactcacgttgggaaccttttcttttattttttaatattatatttcaatattttttttcatccatttaa 35832986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 24631509 - 24631432
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg 85  Q
    |||||||||||||||  | |||||| ||||| |||  |||||||| ||  |||||||||||||||||| |||||||||    
T  24631509 aatttatttcacaagtgcctctcttcaactcgcgctgacaaccttttcatttattttttaatattatatttcaatttg 24631432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 51186972 - 51187029
Alignment:
Q  46 caaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||| ||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  51186972 caaccttttcttttattttttaatattatatttcaatttgtttttttcttccatttaa 51187029  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 16896484 - 16896528
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  16896484 ttattttttaatattatatttcaatatgttttttcttccatttaa 16896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 47723657 - 47723565
Alignment:
Q  9 atttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat-ttgtcttttcttccattt 100  Q
    ||||||||||||||||  |||||| || ||||||    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||    
T  47723657 atttatttcacaagcatctctcttcaattcacgccgggaaccttttcttttattttttaatattatatttcaatatttttttttcttccattt 47723565  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10582738 - 10582675
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttt 64  Q
    |||| |||| ||||||||||||||| |||||| |||||||||| |||| ||| ||| |||||||    
T  10582738 tctccgtaaattatttcacaagcacctctcttcaactcacgcagacaatcttttcttttatttt 10582675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 13859583 - 13859678
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| ||| || |||||  ||   ||| ||| ||| |||||||||||||||||| || |||||| | |||||||||||||||    
T  13859583 aatttatttcacaagcacctcttttcaactcttgctggcaatcttttcttttattttttaatattatattttaatttgtttttttcttccatttaa 13859678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 15517851 - 15517946
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  15517851 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 15517946  T

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Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 28362324 - 28362240
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttctt 94  Q
    |||||||||||||| ||||| |||| |  ||||| |  ||| ||||||| |||||||||||||||||| |||||||| | |||||||    
T  28362324 aatttatttcacaatcacttttcttca--tcacggatgcaatcttatcttttattttttaatattatatttcaatttattttttctt 28362240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 53340484 - 53340579
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || |||||   | |||||| ||| ||||||| |||||||||| |||||| || | |||||||||||||||    
T  53340484 aatttatttcacaagcatctctcttcaattcacgttgagaaccttttcttttattttctaatattatatttcaatatgtttttttcttccatttaa 53340579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 2414219 - 2414129
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||| ||||||||||||||  || |||||| ||||||| |   |||| |  ||| |||||||||||||||||| |||||||||| ||||    
T  2414219 tctctgcaatttatttcacaaatacctctcttcaactcacacgggcaacatattcttttattttttaatattatatttcaatttgtttttt 2414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 22117218 - 22117148
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  22117218 tatttcacaagcacctcttttcaactcacgctggaaaccttttcttttattttttaatattatatttcaat 22117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 34059469 - 34059399
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  34059469 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 34059399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 45474389 - 45474331
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    |||||||||||||||||| |||||| |||||||||   ||||||| ||| |||||||||    
T  45474389 aatttatttcacaagcacctctcttcaactcacgctggcaaccttttcttttatttttt 45474331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 35715938 - 35715843
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||  | |||||||||||||||    
T  35715938 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgttttttttcttccatttaa 35715843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 347427 - 347363
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttt 65  Q
    |||| ||||||||||| |||||||| ||||||  |||||||||  ||||||| ||| ||||||||    
T  347427 tctccgtaatttattttacaagcacctctcttctactcacgcaggcaaccttttcttttattttt 347363  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 1940999 - 1941042
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||||| | |||||||||||||||    
T  1940999 ttattttttaatattatatttcaattt-ttttttcttccatttaa 1941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 5754171 - 5754227
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  5754171 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 5754227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 13626311 - 13626355
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||| |||||||||| |||||| ||| |||||||||||||||    
T  13626311 ttattttctaatattatatttcaatatgttttttcttccatttaa 13626355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 17730878 - 17730959
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||| ||||||| || ||||||||| |  |||||  | | |||||||||||||||||| |||||| ||| ||||    
T  17730878 aatttatttcacaaacacttcttttcaactcacgccaggaacct--ttttttattttttaatattatatttcaatatgtttttt 17730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 17736092 - 17736136
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| ||||||  || |||||||||||||||    
T  17736092 ttattttttaatattatatttcaatacgttttttcttccatttaa 17736136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 36854402 - 36854454
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttgtcttttcttccatt 99  Q
    |||||| ||| ||||||| |||||||||| |||||| ||| ||||||||||||    
T  36854402 aaccttttcttttattttctaatattatatttcaatatgttttttcttccatt 36854454  T

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Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 174827 - 174725
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  174827 tctctgtaatttatttcacaagcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 174728  T
Q  100 taa 102  Q
    |||    
T  174727 taa 174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 8691199 - 8691295
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  8691199 gtaatttatttcacaaacacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgttttttcttccatttaa 8691295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34248562 - 34248463
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |   ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  34248562 tctctgtaatttatttcacaagcacttctcttcaactcacacgggcaaccttatctattattttttaatattatatttcaatttgttttttcttccattt 34248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34207852 - 34207751
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| | |||||||||||||||||| ||||||||| | ||||||||||||    
T  34207852 tctctgtaatttatttcacaagcacttctcttcaactcacgcaggcaaccttatattttattttttaatattatatttcaatttgtttttttcttccatt 34207753  T
Q  100 ta 101  Q
    ||    
T  34207752 ta 34207751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 19988168 - 19988265
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||| ||||| ||||||||||||| |  |||| |||||| |||||||||||||||||| |||||||||| |||| ||||||||||    
T  19988168 tgtaatttatttcacaaacacttatctttaactcacgtaggcaactttatcttttattttttaatattatatttcaatttgtttttttttccatttaa 19988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 7540659 - 7540758
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctt--ttcttccatttaa 102  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| |||||| |||||||||||||||||| |||||||||| ||  |||||||||||||    
T  7540659 tgtaatttatttcacatgcacttctcttcaactcacgcatgcaacgttatcttttattttttaatattatatttcaatttgtttttgttcttccatttaa 7540758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29042478 - 29042569
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctctta-ttttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||| ||| ||||||||||||||| |||||||||| ||||    
T  29042478 tctctgtaatttatttcacaagcacttatcttcaactcacgcagacaaccctatcttttatttttttaatattatatttcaatttgtttttt 29042569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10944965 - 10945067
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||| |||||||||||||||||||| ||| || |||||||||| |||||||| ||| |||||||||||||||||| ||||||||  | ||||||||||||    
T  10944965 tctccgtaatttatttcacaagcacctctattcaactcacgcagacaaccttttcttttattttttaatattatatttcaatttatttttttcttccatt 10945064  T
Q  100 taa 102  Q
    |||    
T  10945065 taa 10945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17504719 - 17504809
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||  ||||| ||||| |||||||||||||||||| |||||||||| ||||    
T  17504719 tctctgtgatttatttcacaagcatttctcttcaactcacgcatgcaaccatatcttttattttttaatattatatttcaatttgtttttt 17504809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29975574 - 29975647
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattata 75  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||| ||||||||||||||    
T  29975574 tctctgtaatttatttcacaaacacttctcttcaactcacgcagacaaccttatctttta-tttttaatattata 29975647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 13460512 - 13460416
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  13460512 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 13460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 6832684 - 6832776
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||| ||  || ||||||| |    |||||| ||| |||||||||||||||||| || ||||||| |||||||||||||    
T  6832684 aatttatttcacaagcacctccattcaactcacactgttaaccttttcttttattttttaatattatattttaatttgttttttcttccattt 6832776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 18313163 - 18313256
Alignment:
Q  10 tttatttcacaagcacttctctttaactcacgcaaacaaccttatctctta-ttttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||||| || ||||||||     |||||| ||| ||| ||||||||||||||| |||||| ||| || ||||||||||||    
T  18313163 tttatttcacaagcacttcttttcaactcacgttgggaaccttttcttttatttttttaatattatatttcaatatgttttgtcttccatttaa 18313256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 8612199 - 8612243
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  8612199 ttattttttaatattatatttcaatatgttttttcttccatttaa 8612243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 1930233 - 1930328
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || ||||||    ||| || ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  1930233 aatttatttcacaagcatctctcttcaattcacgctgggaacattttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 1930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 2518513 - 2518584
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaac-aaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || ||||||||| ||  |||||| ||| |||||||||||||||||| ||||||    
T  2518513 tatttcacaagcacctcttttcaactcacgctaaggaaccttttcttttattttttaatattatatttcaat 2518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 5760455 - 5760380
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||||||| ||| ||| || |||||||||  | ||| || ||| |||||||||||||||||| ||||||    
T  5760455 taatttatttcacaaacacctcttttcaactcacgctgagaacattttcttttattttttaatattatatttcaat 5760380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 7220825 - 7220900
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||||||||||  |||||| || |||||   | |||||| ||| |||||||||||||||||| ||||||    
T  7220825 taatttatttcacaagcatctctcttcaattcacgttgagaaccttttcttttattttttaatattatatttcaat 7220900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 8611327 - 8611402
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||||||| ||||||| || |||||||||    ||| || ||| |||||||||||||||||| ||||||    
T  8611327 taatttatttcacaaacacttcttttcaactcacgctgggaacattttcttttattttttaatattatatttcaat 8611402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 13459991 - 13459896
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  13459991 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 13459896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 29864099 - 29864036
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatat 71  Q
    |||||||||||||||||| |||||| |||||||||  |||||||| | | |||||||| |||||    
T  29864099 aatttatttcacaagcacctctcttcaactcacgccgacaaccttttattttatttttcaatat 29864036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 34317381 - 34317476
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| ||| || |||||||||    |||||| ||| ||||||||| |||||||| | |||| || | |||||||||||||||    
T  34317381 aatttatttcacaagcacctcttttcaactcacgcttggaaccttttcttttatttttttatattatattacaatatgtttttttcttccatttaa 34317476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 14890883 - 14890813
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  14890883 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 14890813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 21796867 - 21796937
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  21796867 tatttcacaagcacctcttttcaactcacgccgggaaccttttcttttattttttaatattatatttcaat 21796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 34248588 - 34248558
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctct 31  Q
    |||||||||||||||||||||||||||||||    
T  34248588 tctctgtaatttatttcacaagcacttctct 34248558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 1929545 - 1929585
Alignment:
Q  62 tttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  1929545 tttttaatattatatttcaatatgttttttcttccatttaa 1929585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 28193341 - 28193437
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||||| | | ||| || ||||||||| |  |||||| ||| |  ||||||||||||||| |||||| || | |||||||||||||||    
T  28193341 taatttatttcacaaactcctcttttcaactcacgctaggaaccttttctttatttttttaatattatatttcaatatgtttttttcttccatttaa 28193437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 138804 - 138703
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||  || |||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  138804 tctctgtaatttatttcacaagcacttctcttcaactcatgcatgcatccttatcttttattttttaatattatatttcaatttgttttttcttccattt 138705  T
Q  101 aa 102  Q
    ||    
T  138704 aa 138703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17367231 - 17367130
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| |||||||||||||||||| |||||||| | |||||||||||||    
T  17367231 tctctgtaatttatttcacaagcacttcgcttcaactcacacaagcaaccttatcttttattttttaatattatatttcaattttttttttcttccattt 17367132  T
Q  101 aa 102  Q
    ||    
T  17367131 aa 17367130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24474395 - 24474294
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||||||||||||||||||||||  ||||||| ||||||||||  ||||||||||| ||||| |||||||||||| |||||||||| |||||||||||||    
T  24474395 tctctgtaatttatttcacaagcgattctcttcaactcacgcaggcaaccttatcttttattgtttaatattatatttcaatttgttttttcttccattt 24474296  T
Q  101 aa 102  Q
    ||    
T  24474295 aa 24474294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 39730046 - 39729949
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||||||| |||| ||||||||||    
T  39730046 tgtaatttatttcagaagcacttctcttcaactcacgcaagcaaacttatcttttattttttaatattatatttcaatttgtttttttttccatttaa 39729949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 43119986 - 43119891
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||  |||||| ||||||||||  ||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  43119986 taatttatttcacaagcatctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaatttgttttttcttccatttaa 43119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 49570458 - 49570560
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccat 98  Q
    ||||||||||||||||||||| |||||||| | ||||||||||  ||||||||||| |||||||||||||||||| |||||||||  | |||||||||||    
T  49570458 tctctgtaatttatttcacaaacacttctcctcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgttttttttcttccat 49570557  T
Q  99 tta 101  Q
    |||    
T  49570558 tta 49570560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 34077557 - 34077651
Alignment:
Q  9 atttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||||||||| ||||||||||  || |||||||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  34077557 atttatttcacaagcacttctcttcaactcacgcaggcagccttatcttttattttttaatattatatttcaatttgtttttttcttccatttaa 34077651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39879961 - 39879861
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||  |||||||||| ||| |||||||||    
T  39879961 tctccgtaatttatttcacaagcacctctcttcaactcacgcagacaaccttttcttttattttttaatattatttttcaatttgtttttgtcttccatt 39879862  T
Q  100 t 100  Q
    |    
T  39879861 t 39879861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37824880 - 37824778
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    ||||||| ||||||||||||| |||||||||| ||||| ||||  ||||||||||| |||||||||||||||||| ||||||||  | ||||||||||||    
T  37824880 tctctgtgatttatttcacaaacacttctcttcaactcgcgcaggcaaccttatcttttattttttaatattatatttcaatttatttttttcttccatt 37824781  T
Q  100 taa 102  Q
    |||    
T  37824780 taa 37824778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36953489 - 36953388
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||| ||  ||| || || |||||||  ||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||    
T  36953489 tctccgtaatttatttcacaaacatctctattcaattcacgcaggcaaccttttcttttattttttaatattatatttcaatttgttttttcttccattt 36953390  T
Q  101 aa 102  Q
    ||    
T  36953389 aa 36953388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34651527 - 34651627
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||||||||||||||||||||||| |||||||  ||||||||   ||||||||| | |||||||||||||||||| ||||||||  | ||||||||||||    
T  34651527 tctctgtaatttatttcacaagcaattctcttcgactcacgccggcaaccttattttttattttttaatattatatttcaatttatttttttcttccatt 34651626  T
Q  100 t 100  Q
    |    
T  34651627 t 34651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 43123489 - 43123584
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| |||||||||| ||||||| |   ||||||| ||| |||||||||||||||||  ||||||||| |||||||||||||||||    
T  43123489 aatttatttcacaaacacttctcttcaactcacacgggcaaccttttcttttattttttaatattatttttcaatttgctcttttcttccatttaa 43123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 1323355 - 1323270
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgt 86  Q
    |||| |||||||||||||||| ||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  ||||||||||    
T  1323355 tctccgtaatttatttcacaaacacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaatttgt 1323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 43116470 - 43116565
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||| |||||| |||||| |     |||||| ||| |||||||||||||||||| |||||| | | |||||||||||||||    
T  43116470 taatttatttcacaagcacctctcttcaactcatgttgggaaccttttcttttattttttaatattatatttcaatattttttttcttccatttaa 43116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 8946848 - 8946750
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| |||||||| |||| ||||||| ||  ||   |||||| |||||||||||||| ||| ||||||||| | |||||||||||||||    
T  8946848 tgtaatttatttcagaagcacttttcttcaactcactcaggcacatttatcttttattttttaatataatatttcaatttgtttttttcttccatttaa 8946750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 18108189 - 18108285
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  18108189 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 18108285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 21966850 - 21966757
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    |||||||||||||||||| |||||| |||||| ||   ||| ||| ||| ||||||||||||| |||| ||||||||| | |||||||||||||    
T  21966850 aatttatttcacaagcacctctcttcaactcatgccggcaaacttttcttttattttttaataatatatttcaatttgcttttttcttccattt 21966757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 43258332 - 43258236
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  43258332 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 43258236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 50398746 - 50398650
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  50398746 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 50398650  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 17669159 - 17669232
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||||||| ||| || ||||||||| |  |||||| ||| |||||||||||||||||| ||||||    
T  17669159 aatttatttcacaagcacctcttttcaactcacgctag-aaccttttcttttattttttaatattatatttcaat 17669232  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 28627408 - 28627505
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    ||||||||||||||||||| | | || |||||||||    |||||| ||| ||||||| |||||||||| |||||||||  | |||||||||||||||    
T  28627408 taatttatttcacaagcaccttttttaaactcacgctgggaaccttttcttttattttataatattatatttcaatttgttttttttcttccatttaa 28627505  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31639362 - 31639269
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    |||||||||||||||||| ||  || |||||||||   |||| || ||| |||||||||||||||||| || |||||| | |||||||||||||    
T  31639362 aatttatttcacaagcacctccattcaactcacgctgtcaactttttcttttattttttaatattatattttaatttgcttttttcttccattt 31639269  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 23647136 - 23647043
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| |||||| |   |||||||| | |  ||||||||||||||||| ||||||||| | |||||||||||||||    
T  23647136 aatttatttcacaagcatctctcttcaactcatgttgacaacctttttt--tattttttaatattatatttcaatttgtttttttcttccatttaa 23647043  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 41918607 - 41918523
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||||||||| ||| || ||||||| |    || ||||||| |||||||||||||||||| |||||| ||| ||||    
T  41918607 taatttatttcacaagcacctcttttcaactcacactgggaatcttatcttttattttttaatattatatttcaatatgtttttt 41918523  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 18108710 - 18108805
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  18108710 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 18108805  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 23911950 - 23911855
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatt-ttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| ||| || |||||||      |||||| ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  23911950 aatttatttcacaagcacctcttttcaactcacattgggaaccttttcttttattcttttaatattatatttcaatatgttttttcttccatttaa 23911855  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 43257811 - 43257716
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  43257811 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 43257716  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 47391704 - 47391609
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt-cttccatttaa 102  Q
    |||||||||||||||||  | | || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||| |||| |||||||||||    
T  47391704 aatttatttcacaagcatcttttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaatatgtattttccttccatttaa 47391609  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 50398225 - 50398130
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  50398225 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 50398130  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 11607476 - 11607402
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||||||| || ||| | ||||||||| ||||  |||||||| | | |||||||||||||||||| ||||||    
T  11607476 aatttatttcagaaacacctatctttaacttacgctgacaaccttttattttattttttaatattatatttcaat 11607402  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 18811583 - 18811653
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  18811583 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 18811653  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 33932169 - 33932231
Alignment:
Q  2 ctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttt 64  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||  |||| |||| | |||||||    
T  33932169 ctctgaaatttatttcacaagcatttctcttcaactcacgcaggcaactttatattttatttt 33932231  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 40794674 - 40794604
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    ||||||| |||||| ||| || |||||| || || |||||| ||| |||||||||||||||||| ||||||    
T  40794674 tatttcataagcacctcttttcaactcatgctaagaaccttttcttttattttttaatattatatttcaat 40794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 50558265 - 50558357
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || ||| |||||   ||||||| ||| |||||||||||||||||| |||||| ||| |||| ||||||||||    
T  50558265 aatttatttcacaaacacctcttttcaacacacgctggcaaccttttct-ttattttttaatattatatttcaatatgt-tttttttccatttaa 50558357  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 50558848 - 50558902
Alignment:
Q  48 accttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||| ||| |||||||||||||||||| ||||||  || |||||||||||||||    
T  50558848 accttttcttttattttttaatattatatttcaatacgttttttcttccatttaa 50558902  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 10697790 - 10697695
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||  | |||||||||||||||    
T  10697790 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgttttttttcttccatttaa 10697695  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 10702679 - 10702584
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||  | |||||||||||||||    
T  10702679 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgttttttttcttccatttaa 10702584  T

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Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14451333 - 14451232
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||| ||||||||| | ||||||||||||    
T  14451333 tctctgtaatttatttcacaagcacttctcttcaactcacgcaaacaaccttatttttta-tttttaatattatatttcaatttgtttttttcttccatt 14451235  T
Q  100 taa 102  Q
    |||    
T  14451234 taa 14451232  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 38139593 - 38139497
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattta 101  Q
    ||||||||||||| ||| |||||||||| |||||| |||| ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  38139593 tgtaatttatttcgcaaacacttctcttcaactcatgcaaccaaccttatcttttattttttaatattatatttcaatttgttttttcttccattta 38139497  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 35003402 - 35003492
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||    
T  35003402 tctctgtaatttatttcacaaacacttatcttcaactcacgcagacaaccttatcttttattttttaatattatatttcaatttgtttttt 35003492  T

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Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12262154 - 12262070
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgt 86  Q
    ||||||||||||||||||||||||||||| || ||||||| || |||||||||||| |||||||||||||||||| ||||||||||    
T  12262154 tctctgtaatttatttcacaagcacttct-ttcaactcacacagacaaccttatcttttattttttaatattatatttcaatttgt 12262070  T

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Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36060104 - 36060007
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccat 98  Q
    ||||| |||||||||||||||| || |||||| ||||||||||  ||||||| ||| |||||||||||||||||| |||||||| | |||||||||||    
T  36060104 tctctataatttatttcacaagtacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaattttttttttcttccat 36060007  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6746393 - 6746493
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||  ||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  6746393 tctctataatttatttcacaagcacttatcttcaactcatgcaggcaatcttatcttttattttttaatattatatttcaatttgtttttttcttccatt 6746492  T
Q  100 t 100  Q
    |    
T  6746493 t 6746493  T

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Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6656686 - 6656776
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||  ||| ||||||| |||||||||||||||||| |||||||||| ||||    
T  6656686 tctctataatttatttcacaagcacttatcttcaactcatgcaggcaatcttatcttttattttttaatattatatttcaatttgtttttt 6656776  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6737088 - 6737178
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||  ||| ||||||| |||||||||||||||||| |||||||||| ||||    
T  6737088 tctctataatttatttcacaagcacttatcttcaactcatgcaggcaatcttatcttttattttttaatattatatttcaatttgtttttt 6737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41525555 - 41525656
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||| ||| |||||||||||||| ||  ||||| | ||||||||||||    
T  41525555 tctctgtaatttatttcacaagcatttctcttcaactcacgcatgcaaccttatctttta-tttttaatattatatttttatttgtttttttcttccatt 41525653  T
Q  100 taa 102  Q
    |||    
T  41525654 taa 41525656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 39524694 - 39524786
Alignment:
Q  9 atttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    ||||||||||||| |||||||| | ||||||||||   |||||||||| |||||||||||||||||| ||||||||| | |||||||||||||    
T  39524694 atttatttcacaaacacttctcctcaactcacgcacgaaaccttatcttttattttttaatattatatttcaatttgtttttttcttccattt 39524786  T

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Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37034056 - 37034139
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt 84  Q
    |||| ||||||||||||||||| || |||||| ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||    
T  37034056 tctccgtaatttatttcacaagtacctctcttcaactcacgcatgcaaccttttcttttattttttaatattatatttcaattt 37034139  T

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Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 39486860 - 39486778
Alignment:
Q  9 atttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||| | ||||||| ||||||||||  |||| |||||| |||||||||||||||||| |||||||||| ||||    
T  39486860 atttatttcacaagtatttctcttcaactcacgcatgcaactttatcttttattttttaatattatatttcaatttgtttttt 39486778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 45139876 - 45139802
Alignment:
Q  25 cttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatt 99  Q
    |||||||| ||||||| ||  ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  45139876 cttctcttcaactcacacaggcaaccttatcttttattttttaatattataattcaatttgttttttcttccatt 45139802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 42983234 - 42983334
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttt-tcttccatt 99  Q
    |||| |||||||||||||||||||   ||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||| | ||| |||||||||    
T  42983234 tctccgtaatttatttcacaagcatccctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaatttatttttgtcttccatt 42983333  T
Q  100 t 100  Q
    |    
T  42983334 t 42983334  T

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Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 6304256 - 6304160
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  6304256 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 6304160  T

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Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 23970168 - 23970072
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  23970168 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 23970072  T

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Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 39140863 - 39140951
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttcc 96  Q
    ||||||||||||||||||| | |||| ||||||||| |  |||||| ||| |||||||||||||||||| |||||| ||| |||| ||||    
T  39140863 taatttatttcacaagcacctatcttaaactcacgctag-aaccttttcttttattttttaatattatatttcaatatgtttttttttcc 39140951  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 42065230 - 42065134
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  42065230 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 42065134  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 44936782 - 44936878
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  44936782 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 44936878  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12262011 - 12262062
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaacctt 52  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  |||||||    
T  12262011 tctctgtaatttatttcacaagcacttttcttcaactcacgcaggcaacctt 12262062  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19243652 - 19243746
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| | | ||  ||||||||    |||||| ||| |||||||||||||||||| |||||| ||| ||| |||||||||||    
T  19243652 aatttatttcacaagcaccttttttccactcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttccttccatttaa 19243746  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19316836 - 19316930
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| | | ||  ||||||||    |||||| ||| |||||||||||||||||| |||||| ||| ||| |||||||||||    
T  19316836 aatttatttcacaagcaccttttttccactcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttccttccatttaa 19316930  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 40049545 - 40049452
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttctt 94  Q
    |||| ||||||||||||||| |||| ||| || || ||||||   ||||||| ||| |||||||||||||||||| || ||||| | |||||||    
T  40049545 tctccgtaatttatttcacaggcacctcttttcaattcacgctggcaaccttttcttttattttttaatattatattttaattttttttttctt 40049452  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 44654188 - 44654281
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    |||||||||||||||||| ||  || |||||||||   ||||||| | | |||||||||||||||||| || |||||| | |||||||||||||    
T  44654188 aatttatttcacaagcacctccattcaactcacgctgtcaaccttttattttattttttaatattatattttaatttgcttttttcttccattt 44654281  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 6303732 - 6303637
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  6303732 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 6303637  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 23969647 - 23969552
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  23969647 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 23969552  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 42064708 - 42064613
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  42064708 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 42064613  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 44388645 - 44388551
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  44388645 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgtttttttcttccatttaa 44388551  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 44937303 - 44937398
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  44937303 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 44937398  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 33427141 - 33427071
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  33427141 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 33427071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 41626028 - 41626098
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  41626028 tatttcacaagcacctcttttcaactcacgctggaaaccttttcttttattttttaatattatatttcaat 41626098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 45139932 - 45139904
Alignment:
Q  1 tctctgtaatttatttcacaagcacttct 29  Q
    |||||||||||||||||||||||||||||    
T  45139932 tctctgtaatttatttcacaagcacttct 45139904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23153892 - 23153982
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| |||||||||| ||||    
T  23153892 tctctgtaatttatttcacaagcacttctcttcaactcacgcaagcaaccttatcttttatttttaaatattatatttcaatttgtttttt 23153982  T

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Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 47839967 - 47840064
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||| || ||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||    
T  47839967 tgtaatttatttcacaaacatttctcttcaactcacgcagacaaccttatcttttattttttaatattatatttcaatttgttttttcttccgtttaa 47840064  T

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Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41344137 - 41344034
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccat 98  Q
    ||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||  | |||||||||||    
T  41344137 tctctgtgatttatttcacaagcacttctcttcaactcacgcatgcaaccttatcttttattttttaatattatatttcaatttgttttttttcttccat 41344038  T
Q  99 ttaa 102  Q
    ||||    
T  41344037 ttaa 41344034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5482689 - 5482779
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  5482689 tctctgtaatttatttcacaagcacttctcttcaactcaagcaggcaaccttatcttttattttttaatattatatttcaatttgtttttt 5482779  T

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Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 35909529 - 35909629
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  35909529 tctccgtaatttatttcacaagcacatctcttcaactcacgcagacaaccttttcttttattttttaatattatatttcaatttgtttttttcttccatt 35909628  T
Q  100 t 100  Q
    |    
T  35909629 t 35909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4493190 - 4493100
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| || ||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  4493190 tctctctagtttatttcacaagcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttt 4493100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40036862 - 40036760
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtct-tttcttccatt 99  Q
    |||||||||| |||||||||| || ||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||| | |||||||||||    
T  40036862 tctctgtaatctatttcacaaacatttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttgtttcttccatt 40036763  T
Q  100 taa 102  Q
    |||    
T  40036762 taa 40036760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5484712 - 5484611
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||| |||||| ||||||||   |||||||| ||| |||||||||||||||||| |||||||||| |||| || |||||    
T  5484712 tctcagtaatttatttcacaagcacctctcttcaactcacgttgacaaccttttcttttattttttaatattatatttcaatttgttttttttttcattt 5484613  T
Q  101 aa 102  Q
    ||    
T  5484612 aa 5484611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 5525339 - 5525434
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||||||| ||  ||||||| ||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  5525339 aatttatttcacaagcacctctcttcaactcacacaggcaaccttttcttttattttttaatattatatttcaatttgtttttttcttccatttaa 5525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16934273 - 16934174
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| ||||||||||| |||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||| | || ||||||||||    
T  16934273 tctccgtaatttattttacaagcacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaattttttttgtcttccattt 16934174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16939656 - 16939557
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| ||||||||||| |||||||| |||||| ||||||||||  ||||||| ||| |||||||||||||||||  |||||||| | || ||||||||||    
T  16939656 tctccgtaatttattttacaagcacctctcttcaactcacgcaggcaaccttttcttttattttttaatattatttttcaattttttttgtcttccattt 16939557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44652708 - 44652606
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| |||||| |||  ||||||| ||| |||||||||||||||||  ||||||||  | ||||||||||||    
T  44652708 tctccgtaatttatttcacaagcacatctcttcaactcatgcaggcaaccttttcttttattttttaatattatgtttcaatttatttttttcttccatt 44652609  T
Q  100 taa 102  Q
    |||    
T  44652608 taa 44652606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 44550430 - 44550523
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    |||||||||||||||||| |||||| |||||| || | ||| ||| ||| ||||||||||||| |||| ||||||||| | |||||||||||||    
T  44550430 aatttatttcacaagcacctctcttcaactcatgccagcaaacttttcttttattttttaataatatatttcaatttgcttttttcttccattt 44550523  T

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Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37311221 - 37311119
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    |||||| |||||||||||||||||| |||||| |||||  ||   ||||||| ||| |||||||||||||||||| || |||||| | |||||||||| |    
T  37311221 tctctgcaatttatttcacaagcacctctcttcaactcttgctggcaaccttttcttttattttttaatattatattttaatttgcttttttcttccaat 37311122  T
Q  100 taa 102  Q
    |||    
T  37311121 taa 37311119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 4407382 - 4407313
Alignment:
Q  34 aactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||| | |||||||||||||||    
T  4407382 aactcacgcatgcaaccttttcttttattttttaatattatatttcaatttgtttttttcttccatttaa 4407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 6915140 - 6915044
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  6915140 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 6915044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 21135199 - 21135142
Alignment:
Q  27 tctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt 84  Q
    |||||||||||||||||  ||||||| ||| |||||||||||||||||| ||||||||    
T  21135199 tctctttaactcacgcatgcaaccttttcttttattttttaatattatatttcaattt 21135142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 47577117 - 47577021
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  47577117 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 47577021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 17815029 - 17815125
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||||||||| |||||| |||||||||    |||||| ||| ||| |||||||| ||||| |||||| || | |||||||||||||||    
T  17815029 taatttatttcacaagcacatctcttcaactcacgctgggaaccttttcttttactttttaatgttatatttcaatatgtttttttcttccatttaa 17815125  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 19051955 - 19051859
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||||||||| |||||| |||||||||    |||||| ||| ||| |||||||| ||||| |||||| || | |||||||||||||||    
T  19051955 taatttatttcacaagcacatctcttcaactcacgctgggaaccttttcttttactttttaatgttatatttcaatatgtttttttcttccatttaa 19051859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 47169107 - 47169202
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| || ||| || | |||||||||||||||    
T  47169107 aatttatttcacaagcacctcttttcaactcacgctcggaaccttttcttttattttttaatattatattttaatatgtttttttcttccatttaa 47169202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 4409239 - 4409181
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    |||||||||||||||||| |||||| |||||||||  |||||||| ||| |||||||||    
T  4409239 aatttatttcacaagcacctctcttcaactcacgctgacaaccttttcttttatttttt 4409181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 5693840 - 5693910
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| | | ||||||||||||  | |||||| ||| |||||||||||||||||| ||||||    
T  5693840 tatttcacaagcacctatttttaactcacgctgagaaccttttcttttattttttaatattatatttcaat 5693910  T

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Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 21893701 - 21893795
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || |||||     || ||| ||| |||||||||||||||||| |||||| ||| |||||||||||||||    
T  21893701 aatttatttcacaagcatctctcttcaattcacgttgggaatcttttcttttattttttaatattatatttcaatatgttttttcttccatttaa 21893795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 38437669 - 38437572
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    ||||||||||||||||||| | | || |||||||||    |||||| ||| ||||||| |||||||||| |||||||||  | |||||||||||||||    
T  38437669 taatttatttcacaagcaccttttttaaactcacgctgggaaccttttcttttattttataatattatatttcaatttgttttttttcttccatttaa 38437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36759033 - 36759105
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattat 74  Q
    ||||| |||||||||||||||||||||||||| ||| ||| ||  ||||||||| | ||| |||||||||||||    
T  36759033 tctctataatttatttcacaagcacttctcttcaacacacacaggcaaccttatatttta-tttttaatattat 36759105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36764801 - 36764873
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattat 74  Q
    ||||| |||||||||||||||||||||||||| ||| ||| ||  ||||||||| | ||| |||||||||||||    
T  36764801 tctctataatttatttcacaagcacttctcttcaacacacacaggcaaccttatatttta-tttttaatattat 36764873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 4495167 - 4495084
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||| |||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  4495167 aatttatttcaaaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttt 4495084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 6914619 - 6914524
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  6914619 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 6914524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 42830110 - 42830043
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattata 75  Q
    ||||||||||||||||| ||||||| || ||||||    |||||| ||| ||||||||||||||||||    
T  42830110 aatttatttcacaagcatttctcttcaattcacgctgggaaccttttcttttattttttaatattata 42830043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 47576596 - 47576501
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  47576596 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 47576501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 9144439 - 9144532
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| ||| |||||||||||||  |||||| ||| |||||||||||||||    
T  9144439 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttagtttttaatattatcgttcaatatgttttttcttccatttaa 9144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 14306268 - 14306338
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  14306268 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 14306338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 17466765 - 17466835
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  17466765 tatttcacaagcacctcttttcaactcacgctggaaaccttttcttttattttttaatattatatttcaat 17466835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 17586449 - 17586379
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  17586449 tatttcacaagcacctcttttcaactcacgctggaaaccttttcttttattttttaatattatatttcaat 17586379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 22992732 - 22992824
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    ||||||||||||||| ||| ||| || |||||||||    ||| || ||| |||||||||||||||||| |||||| | | |||||||||||||    
T  22992732 taatttatttcacaaacacctcttttcaactcacgctgggaacattttcttttattttttaatattatatttcaatatat-ttttcttccattt 22992824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 27737422 - 27737327
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||  | |||||||||||||||    
T  27737422 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgttttttttcttccatttaa 27737327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 689786 - 689842
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  689786 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 689842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4409880 - 4409940
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaa 68  Q
    ||||||||||||||| ||||||||| |||||| ||   ||||||| ||| |||||||||||    
T  4409880 aatttatttcacaagaacttctcttcaactcatgccggcaaccttttcttttattttttaa 4409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 11840091 - 11840012
Alignment:
Q  11 ttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||| ||| ||| || |||||||||  | |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  11840091 ttatttcacaaacacctcttttcaactcacgctgataaccttttct-ttattttttaatattatatttcaatatgtttttt 11840012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 21600614 - 21600535
Alignment:
Q  11 ttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||| ||| ||| || |||||||||  | |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  21600614 ttatttcacaaacacctcttttcaactcacgctgataaccttttct-ttattttttaatattatatttcaatatgtttttt 21600535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 34126899 - 34126995
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat-ttgtcttttcttccatttaa 102  Q
    ||||||||||||||| ||| ||| || |||||||||    ||| || ||| |||||||||||||||||| |||||| |  | |||||||||||||||    
T  34126899 taatttatttcacaaacacctcttttcaactcacgctgggaacattttcttttattttttaatattatatttcaatatatttttttcttccatttaa 34126995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 36768459 - 36768526
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattata 75  Q
    ||||||||||||||| |||||||||| ||| |||| |  ||||||||| | ||| ||||||||||||||    
T  36768459 taatttatttcacaaacacttctcttcaacacacgaaggcaaccttatatttta-tttttaatattata 36768526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 111338 - 111236
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatt 99  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  111338 tctctgtgatttattttacaagcacttctcttcaactcacgcaggcaaccttatcttttattttttaatattatatttcaatttgtttttttcttccatt 111239  T
Q  100 taa 102  Q
    |||    
T  111238 taa 111236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47718761 - 47718863
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||||||| ||||||||  | ||||||||||||    
T  47718761 tctctgtaatttatttcacaagcacttctcttcaactcacgcatgcaaccttatcttttattatttaatattatatttcaatttatttttttcttccatt 47718860  T
Q  100 taa 102  Q
    |||    
T  47718861 taa 47718863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35530650 - 35530548
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccatt 99  Q
    |||| |||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||||| ||||||||  | ||||||||||||    
T  35530650 tctccgtaatttatttcacaagcacctctcttcaactcacgcagacaaccttttcttttattttttaatattatatttcaatttatttttttcttccatt 35530551  T
Q  100 taa 102  Q
    |||    
T  35530550 taa 35530548  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38360955 - 38361045
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||| |||||||||||||||||||||||| |||||||| |  ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  38360955 tctctgtgatttatttcacaagcacttctcttcaactcacgtaggcaaccttatcttttattttttaatattatatttcaatttgtttttt 38361045  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39720476 - 39720581
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgc----aaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttcc 96  Q
    ||||| ||||||||||||||| |||||||||| |||||||||    |  ||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  39720476 tctctataatttatttcacaaacacttctcttcaactcacgcccgcaggcaaccttatcttttattttttaatattatatttcaatttgttttttcttcc 39720575  T
Q  97 atttaa 102  Q
    ||||||    
T  39720576 atttaa 39720581  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 47671299 - 47671202
Alignment:
Q  5 tgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||| ||||||||||||||| ||||||||||  ||||||||||| ||| |||||||||||||| ||||||||| | |||||||||||||||    
T  47671299 tgtaatttattttacaagcacttctcttcaactcacgcaggcaaccttatctttta-tttttaatattatatttcaatttgtttttttcttccatttaa 47671202  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50738404 - 50738507
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccat 98  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| | | |||||||||||||||||| |||||||||| ||||  |||||||    
T  50738404 tctccgtaatttatttcacaagcacctctcttcaactcacgcatgcaaccttttattttattttttaatattatatttcaatttgtttttttccttccat 50738503  T
Q  99 ttaa 102  Q
    ||||    
T  50738504 ttaa 50738507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50774451 - 50774348
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccat 98  Q
    |||| |||||||||||||||||||| |||||| ||||||||||  ||||||| | | |||||||||||||||||| |||||||||| ||||  |||||||    
T  50774451 tctccgtaatttatttcacaagcacctctcttcaactcacgcatgcaaccttttattttattttttaatattatatttcaatttgtttttttccttccat 50774352  T
Q  99 ttaa 102  Q
    ||||    
T  50774351 ttaa 50774348  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35907623 - 35907533
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||  ||||||| | | |||||||||||||||||| |||||||||| ||||    
T  35907623 tctctctaatttatttcacaagcacctctcttcaactcacgcaggcaaccttttattttattttttaatattatatttcaatttgtttttt 35907533  T

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Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 20997173 - 20997077
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||||||||||||||||||| | ||||| ||  ||||||||||| ||| |||||||||||||| ||||||||| | |||||||||||||||    
T  20997173 gtaatttatttcacaagcacttctcttca-ctcacacaggcaaccttatcttttactttttaatattatatttcaatttgtttttttcttccatttaa 20997077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 46090952 - 46090856
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||| ||||||||||||||||||||| ||||||||||  |||| || | | |||||||||||||||||| || ||||||| ||||||| |||||||    
T  46090952 gtaatgtatttcacaagcacttctcttcaactcacgcatgcaacattttattttattttttaatattatattttaatttgttttttctttcatttaa 46090856  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 15497270 - 15497176
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||| |||||||||  | |||||||  ||||||||||| |||||||||||||||||| |||||||| | ||||||| |||||||    
T  15497270 taatttatttcacaagtacttctcttccattcacgcaggcaaccttatcttttattttttaatattatatttcaattt-ttttttctttcatttaa 15497176  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 33899114 - 33899197
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||| |||||| |||||||||  |||| ||| ||| |||||||||||||||||| |||||||||| ||||    
T  33899114 aatttatttcacaagcacctctcttcaactcacgctgacaatcttttcttttattttttaatattatatttcaatttgtttttt 33899197  T

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Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43317689 - 43317589
Alignment:
Q  1 tctctgtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccattt 100  Q
    |||| |||||||||||||||||||| |||||| |||||||||   ||||||| | | ||| |||||||||||||| |||||||| | |||| ||||||||    
T  43317689 tctccgtaatttatttcacaagcacctctcttcaactcacgctggcaaccttttattttaatttttaatattatatttcaatttattttttattccattt 43317590  T
Q  101 a 101  Q
    |    
T  43317589 a 43317589  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 34434913 - 34434829
Alignment:
Q  6 gtaatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||||||||||||||||| |||||| |||| ||||| |||||||| | | || ||||||||||||||| |||||||||| ||||    
T  34434913 gtaatttatttcacaagcacctctcttcaactaacgcagacaacctt-tttttttttttttaatattatatttcaatttgtttttt 34434829  T

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Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 36171060 - 36170965
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  ||||||||| ||||||    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  36171060 aatttatttcacaagcatctctctttaattcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 36170965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 12102308 - 12102214
Alignment:
Q  9 atttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  ||||| |||||| |||  ||||||| ||| ||||||||| |||||||  ||||||||| | |||||||||||||||    
T  12102308 atttatttcacaagcaccgctcttcaactcatgcaggcaaccttttcttttatttttttatattatgtttcaatttgtttttttcttccatttaa 12102214  T

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Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 23190931 - 23191021
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||| |||| ||||||||||    
T  23190931 tatttcacaagcacctcttttgaactcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttttttccatttaa 23191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 36171744 - 36171650
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || ||||||||     |||||| ||| |||||||||||||||||| |||||| ||| |||||||||||||||    
T  36171744 aatttatttcacaaacacctcttttcaactcacgttgggaaccttttcttttattttttaatattatatttcaatatgtgttttcttccatttaa 36171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 39800128 - 39800032
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  39800128 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 39800032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 46851793 - 46851700
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaa-tttgtcttttcttccattt 100  Q
    |||||||||||||||||| |||||| ||||||||| | ||| ||| ||| ||||| |||||| ||||| ||||| ||| | |||||||||||||    
T  46851793 aatttatttcacaagcacctctcttcaactcacgccagcaatcttttcttttattctttaatgttatatttcaattttcttttttcttccattt 46851700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 12175602 - 12175507
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || ||||||    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  12175602 aatttatttcacaagcatctctcttcaattcacgctgggaaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 12175507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 12176291 - 12176198
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| |||||||||||     |||||| ||| ||| |||||||||||||| |||||| ||| |||||||||||||||    
T  12176291 aatttatttcacaaacacatctttttaactcacgttgggaaccttttctttta-tttttaatattatatttcaatatgttttttcttccatttaa 12176198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 35090742 - 35090672
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||  | |||||| ||| |||||||||||||||||| ||||||    
T  35090742 tatttcacaagcacctcttttcaactcacgctgagaaccttttcttttattttttaatattatatttcaat 35090672  T

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Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 52468995 - 52468901
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||| ||||| || ||| || |||||||||  | ||| || ||| |||||||||||||||||| |||||| | | |||||||||||||||    
T  52468995 aatttattttacaagaacctcttttcaactcacgctgagaactttttcttttattttttaatattatatttcaatattttttttcttccatttaa 52468901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 10614880 - 10614973
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaattt-gtcttttcttccattt 100  Q
    |||||||||||||||||| |||||| ||||||  |  |||| ||| ||| ||||||||||||| |||| ||||||||  | |||||||||||||    
T  10614880 aatttatttcacaagcacctctcttcaactcataccgacaaacttttcttttattttttaataatatatttcaatttaattttttcttccattt 10614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 15320067 - 15320023
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  15320067 ttattttttaatattatatttcaatatgttttttcttccatttaa 15320023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 915261 - 915356
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat-ttgtcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || |||||     |||||| ||| ||||||||||||||||||||||||| |  | |||||||||||||||    
T  915261 aatttatttcacaagcatctctcttcaattcacgttgggaaccttttcttttattttttaatattatacttcaatatatttttttcttccatttaa 915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 5238377 - 5238471
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    ||||||||||||||||||| |||||| || ||||||    |||||| ||| ||| |||||||| ||||| |||||| | | |||||||||||||||    
T  5238377 taatttatttcacaagcacatctcttcaagtcacgctgggaaccttttcttttactttttaatgttatatttcaatgt-ttttttcttccatttaa 5238471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 16339800 - 16339895
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||  |||||| || |||||   | |||||| ||| ||||||| |||||||||| |||||| || | |||||||||||||||    
T  16339800 aatttatttcacaagcatctctcttcaattcacgttgagaaccttttcttttattttctaatattatatttcaatatgtttttttcttccatttaa 16339895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 28981457 - 28981362
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||  | | |||||||||||||||    
T  28981457 aatttatttcacaaacacctcttttcaactcacgctggaaaccttttcttttattttttaatattatatttcaatacgtttttttcttccatttaa 28981362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 39799607 - 39799512
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  39799607 aatttatttcaaaagcacatcttttcaactcacactgtgaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 39799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 40831568 - 40831474
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  40831568 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgtttttttcttccatttaa 40831474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 50931968 - 50932027
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    ||||||||||||||||||| |||||| |||||||||   ||||||| ||| |||||||||    
T  50931968 taatttatttcacaagcacctctcttcaactcacgctggcaaccttttcttttatttttt 50932027  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 6107807 - 6107737
Alignment:
Q  12 tatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||| ||| || |||||||||    |||||| ||| |||||||||||||||||| ||||||    
T  6107807 tatttcacaagcacctcttttcaactcacgctgggaaccttttcttttattttttaatattatatttcaat 6107737  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 42189048 - 42188990
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    |||||||||||||||||| |||||| |||||||||   ||||||| ||| |||||||||    
T  42189048 aatttatttcacaagcacctctcttcaactcacgctggcaaccttttcttttatttttt 42188990  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 8393977 - 8394072
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg--tcttttcttccatttaa 102  Q
    |||||||||||||| ||| ||| || |||||||||    |||||| ||| |||||||||||||||||| |||||| ||  | |||||||||||||||    
T  8393977 aatttatttcacaaacacctcttttcaactcacgctgggaaccttttct-ttattttttaatattatatttcaatatgttttttttcttccatttaa 8394072  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 13166133 - 13166064
Alignment:
Q  34 aactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||  |||| || ||| |||||||||||||||||| ||||||||| | ||||||| |||||||    
T  13166133 aactcacgcaggcaactttttcttttattttttaatattatatttcaatttgcttttttcttacatttaa 13166064  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 54196756 - 54196711
Alignment:
Q  58 ttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  54196756 ttattttttaatattatatttcaatttgtttttttcttccatttaa 54196711  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 8395288 - 8395344
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  8395288 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 8395344  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 18684209 - 18684265
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  18684209 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 18684265  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 22519634 - 22519713
Alignment:
Q  11 ttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    ||||||||||| ||| ||| || |||||||||  | |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  22519634 ttatttcacaaacacctcttttcaactcacgctgataaccttttct-ttattttttaatattatatttcaatatgtttttt 22519713  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 32752443 - 32752499
Alignment:
Q  47 aaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  32752443 aaccttttcttttattttttaatattatatttcaatatgtttttttcttccatttaa 32752499  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 55296982 - 55296938
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| | | |||||||||||||||    
T  55296982 ttattttttaatattatatttcaatattttttttcttccatttaa 55296938  T

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Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 17927 - 17834
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccattt 100  Q
    ||||||||| |||||||| | |||| |||||||||   ||||||| ||| |||||||||||||||||| ||||||||| | |||||||||||||    
T  17927 aatttattttacaagcacctatcttcaactcacgctggcaaccttttcttttattttttaatattatatttcaatttgcttttttcttccattt 17834  T

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Target: scaffold0283 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 8122 - 8218
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt--cttccatttaa 102  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| ||| ||||| |||||||||||| |||||| ||| ||||  |||||||||||    
T  8122 aatttatttcacaagcacctctttttaactcacgctgggaaccttttcttttattgtttaatattatatttcaatatgtttttttccttccatttaa 8218  T

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Target: scaffold0283; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 8643 - 8738
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||| |||||| ||| || ||||||| |    |||||| ||| |||||||||||||||||| |||||| || | |||||||||||||||    
T  8643 aatttatttcaaaagcacatcttttcaactcacactgggaaccttttcttttattttttaatattatatttcaatatgattttttcttccatttaa 8738  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 12554 - 12510
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  12554 ttattttttaatattatatttcaatatgttttttcttccatttaa 12510  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 157613 - 157529
Alignment:
Q  7 taatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaatttgtctttt 91  Q
    |||||| |||||||||||| ||| || ||||||| | |  |||||| ||| |||||||||||||||||| |||||| ||| ||||    
T  157613 taatttgtttcacaagcacctcttttcaactcaccctaggaaccttttcttttattttttaatattatatttcaatatgtttttt 157529  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 68401 - 68358
Alignment:
Q  58 ttattttttaatattatacttcaatttgtcttttcttccatttaa 102  Q
    |||||||||||||||||| |||||||| | |||||||||||||||    
T  68401 ttattttttaatattatatttcaattt-ttttttcttccatttaa 68358  T

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Target: scaffold1793 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 1142 - 1048
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttca--atttgtcttttcttccattt 100  Q
    ||||||||||||||| || |||||| ||||||||     |||||| ||| |||||||||||||||||| ||||  |||| | |||||||||||||    
T  1142 aatttatttcacaagtacctctcttcaactcacgttgggaaccttttcttttattttttaatattatatttcaatattttttttttcttccattt 1048  T

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Target: scaffold0237 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 19794 - 19731
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatat 71  Q
    |||||||||||||||||| |||||| |||||||||  |||||||| | | |||||||| |||||    
T  19794 aatttatttcacaagcacctctcttcaactcacgccgacaaccttttattttatttttcaatat 19731  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 123989 - 124047
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttatttttt 66  Q
    |||||||||||||||||| |||||| |||||||||   ||||||| ||| |||||||||    
T  123989 aatttatttcacaagcacatctcttcaactcacgccggcaaccttttcttttatttttt 124047  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 36535 - 36609
Alignment:
Q  8 aatttatttcacaagcacttctctttaactcacgcaaacaaccttatctcttattttttaatattatacttcaat 82  Q
    |||||||||||||||||| ||| || |||||| ||  | ||| || ||| |||||||||||||||||| ||||||    
T  36535 aatttatttcacaagcacctcttttcaactcatgctgagaactttttcttttattttttaatattatatttcaat 36609  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 140855 - 140924
Alignment:
Q  34 aactcacgcaaacaaccttatctcttattttttaatattatacttcaatttg-tcttttcttccatttaa 102  Q
    ||||||||||  |||| || ||| |||||||||||||||||| ||||||||| | ||||||| |||||||    
T  140855 aactcacgcaggcaactttttcttttattttttaatattatatttcaatttgcttttttcttacatttaa 140924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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