View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21187_high_29 (Length: 226)

Name: NF21187_high_29
Description: NF21187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21187_high_29
NF21187_high_29
[»] chr1 (4 HSPs)
chr1 (18-220)||(28163561-28163762)
chr1 (18-220)||(28126860-28127062)
chr1 (20-219)||(267526-267725)
chr1 (134-216)||(26136799-26136881)
[»] chr6 (42 HSPs)
chr6 (18-219)||(27530487-27530688)
chr6 (18-219)||(25492505-25492706)
chr6 (18-219)||(27215247-27215448)
chr6 (23-219)||(26656765-26656961)
chr6 (23-219)||(26762736-26762932)
chr6 (20-219)||(27610306-27610505)
chr6 (21-219)||(26624069-26624267)
chr6 (21-219)||(26730046-26730244)
chr6 (21-219)||(26884868-26885066)
chr6 (20-219)||(27717685-27717884)
chr6 (20-219)||(31285356-31285555)
chr6 (21-219)||(26143666-26143864)
chr6 (20-219)||(27603890-27604089)
chr6 (20-219)||(28781898-28782097)
chr6 (20-219)||(27592207-27592406)
chr6 (20-219)||(27676806-27677005)
chr6 (24-219)||(28787039-28787234)
chr6 (24-219)||(28793160-28793355)
chr6 (21-219)||(26862378-26862576)
chr6 (21-219)||(27705590-27705788)
chr6 (21-219)||(26647277-26647475)
chr6 (21-219)||(26753245-26753443)
chr6 (20-219)||(26056719-26056918)
chr6 (21-219)||(25539341-25539539)
chr6 (21-219)||(26803244-26803442)
chr6 (21-219)||(27697772-27697970)
chr6 (18-219)||(27337281-27337482)
chr6 (18-219)||(27398021-27398222)
chr6 (20-219)||(26076689-26076888)
chr6 (21-219)||(27679748-27679946)
chr6 (21-219)||(25483857-25484055)
chr6 (20-219)||(25511689-25511888)
chr6 (21-219)||(25580520-25580718)
chr6 (21-216)||(27426801-27426996)
chr6 (158-219)||(27576151-27576212)
chr6 (134-186)||(28097662-28097714)
chr6 (134-216)||(26824730-26824812)
chr6 (135-219)||(28227864-28227948)
chr6 (135-219)||(28296926-28297010)
chr6 (135-219)||(28326390-28326474)
chr6 (135-219)||(28504026-28504110)
chr6 (135-219)||(28515063-28515147)
[»] chr4 (7 HSPs)
chr4 (20-219)||(18678742-18678941)
chr4 (20-219)||(18654659-18654858)
chr4 (20-219)||(18730686-18730885)
chr4 (20-219)||(18698582-18698781)
chr4 (20-219)||(18723267-18723466)
chr4 (152-217)||(5090138-5090203)
chr4 (21-216)||(18074559-18074754)
[»] scaffold0349 (1 HSPs)
scaffold0349 (20-219)||(2725-2924)
[»] scaffold0277 (2 HSPs)
scaffold0277 (20-219)||(3898-4097)
scaffold0277 (24-219)||(12861-13056)
[»] chr8 (1 HSPs)
chr8 (21-219)||(29273024-29273222)
[»] scaffold0419 (1 HSPs)
scaffold0419 (24-219)||(8288-8483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-216)||(60367-60562)
[»] chr5 (1 HSPs)
chr5 (134-219)||(16691778-16691863)
[»] chr2 (1 HSPs)
chr2 (116-186)||(3280552-3280622)
[»] scaffold0038 (1 HSPs)
scaffold0038 (135-219)||(28362-28446)


Alignment Details
Target: chr1 (Bit Score: 179; Significance: 9e-97; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 28163762 - 28163561
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  28163762 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctctttttgaa 28163663  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28163662 a-cagttagatcggacattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaataaaattcttttgattcttgatgat 28163564  T
Q  218 gtc 220  Q
    |||    
T  28163563 gtc 28163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 28127062 - 28126860
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||||||||| ||| |||||||| ||||    
T  28127062 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaacatctccaagaaaagctccttttgaa 28126963  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  28126962 aacagttggattggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaagaagattcttttgattcttgatgat 28126863  T
Q  218 gtc 220  Q
    |||    
T  28126862 gtc 28126860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 267725 - 267526
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||||| |||||||||||  | ||||||||||| |||||| ||  |   ||||||||||||||||| ||  |||||||| | ||||    
T  267725 attgctgatcaatttgaaggattatgttttcttcatgatgtgagagaaaattcagctataagtaacttgaaacatctccaagagaagctccttttaaaaa 267626  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||  | ||| ||| ||||||||||    |||||||||||| ||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  267625 caactggattggaaattaagttagaccatgttagtgagggcattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 267526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 26136799 - 26136881
Alignment:
Q  134 attaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatga 216  Q
    ||||||||||||  ||||||| | |||||| ||||||||||| |||||||||||  |||||||||| | |||||||| |||||    
T  26136799 attaagttaggacatgttagtaaaggaattccaatcataaaagaaaggctacatcaaaagaaaattttgttgattctcgatga 26136881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 27530688 - 27530487
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||   ||||||||||||||||| ||  | |||||| | ||    
T  27530688 tcattgctgatcaatttgaagttttatgttttctagaaaatgtgagagtgaattcgacttcagataacttgaaacatctccaagagaaactccttttaaa 27530589  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||| || |||||||||  ||||||||| |||||||||||||||||||||    
T  27530588 aacagttagattggacattaagttaggaggtgttagtcagggaattccaatcattaagcaaaggctatgtagaaagaagattcttttgattcttgatgat 27530489  T
Q  218 gt 219  Q
    ||    
T  27530488 gt 27530487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 25492706 - 25492505
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||| ||||||||||| | ||||||  |||    
T  25492706 tcattgctgatcaatttgaaggtttatgttttctaggagatgtgagagagaattcaactccaagaaacttgaaagatctccaggaaaaactcctttcgaa 25492607  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    ||  |||||||  || ||||||||| || ||||||||||||||||| |||||||||||||| | |||  |||| |||| |||||||||||||| ||||||    
T  25492606 aatggttagattagacattaagttaagaagtgttagtgagggaattgcaatcataaaacaaggactatgtagagagaagattcttttgattctcgatgat 25492507  T
Q  218 gt 219  Q
    ||    
T  25492506 gt 25492505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 27215247 - 27215448
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| |||||||||||||  |   ||||||||||| || |||||| || ||||| ||||    
T  27215247 tcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaacacctgcaggaaaagatccttatgaa 27215346  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    ||| |||||||  ||   |||||||||||||||||||||||| |||||||  |||||| ||| ||||  |  |||||| |||||||||||||||||||||    
T  27215347 aacggttagattagacgataagttaggaggtgttagtgaggggattacaaagataaaaaaaatgctatgtcaaaagaagattcttttgattcttgatgat 27215446  T
Q  218 gt 219  Q
    ||    
T  27215447 gt 27215448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 26656765 - 26656961
Alignment:
Q  23 gctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacag 122  Q
    |||||||||||||||||| ||||||||||  |  |||| |||||||||||| |||     || ||||||||||||||||| |||||||||   ||||| |    
T  26656765 gctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaactg 26656864  T
Q  123 ttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||  | ||||||||||||||| |||||||||||||||| ||||||||||  |||| |||  ||||||||| |||||||||||||| ||||||||    
T  26656865 ttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgt 26656961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 26762736 - 26762932
Alignment:
Q  23 gctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacag 122  Q
    |||||||||||||||||| ||||||||||  |  |||| |||||||||||| |||     || ||||||||||||||||| |||||||||   ||||| |    
T  26762736 gctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaactg 26762835  T
Q  123 ttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||  | ||||||||||||||| |||||||||||||||| ||||||||||  |||| |||  ||||||||| |||||||||||||| ||||||||    
T  26762836 ttagagtgaatattaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgt 26762932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27610505 - 27610306
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| |||||||||||||||||||| ||   || ||||||||||| ||||| ||||||||| | ||||    
T  27610505 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcaggaggagctccttttaaaaa 27610406  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||| ||||||||||||||||||||| |    |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  27610405 cacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgt 27610306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26624069 - 26624267
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||| ||| |   ||||||||||||||||| ||  |||||||| | |||||    
T  26624069 ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaac 26624168  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||| ||| |||||||| |    |||||||||||||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  26624169 aactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 26624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26730046 - 26730244
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||| ||| |   ||||||||||||||||| ||  |||||||| | |||||    
T  26730046 ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaac 26730145  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||| ||| |||||||| |    |||||||||||||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  26730146 aactggattggaaattaagttggaccatgttagtgagggaatttcaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 26730244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26884868 - 26885066
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    ||||||||||||||||| || ||||||||||  |  | || || |||||||||||||     |||||||||||||||||||| || |||||| | |||||    
T  26884868 ttgctgatcaatttgaatgtgtatgttttctgcataaagtcagggagaattcaactcataataacttgaaacatctccaggaggaactccttttaaaaac 26884967  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    | ||| ||   | ||||||||||||| |||||||||||||||| || |||||||  |||| |||||||||||||| |||||||||||||||||||||||    
T  26884968 aattaaattaaacattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaagattcttttgattcttgatgatgt 26885066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27717884 - 27717685
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| |||||||||||||||||||| ||   || ||||||||||| ||| | ||||||||| | ||||    
T  27717884 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcagaaggagctccttttaaaaa 27717785  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||| ||||||||||||||||||||| |    |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  27717784 cacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgt 27717685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 31285356 - 31285555
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||| |||||||||||| || |||||||||||  | |||||||||||||||||| ||  |   ||||||||||||||||| ||  |||||||| ||||||    
T  31285356 attggtgatcaatttgacggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaa 31285455  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || || ||| ||| ||||||||||    |||||||||||||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  31285456 caattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 31285555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26143666 - 26143864
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||| ||||||||||  |  |||| ||||||||||||| ||     ||| ||||||||||||||||||| |||||| | | |||    
T  26143666 ttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaggaagatctccttttaagaac 26143765  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| || | |   ||||||||||| |||||||||||||||| ||||||| ||  |||| |||  ||||||||| |||||||||||||||||||||||    
T  26143766 agttaaattgaaccataagttaggagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgattcttgatgatgt 26143864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27604089 - 27603890
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| ||||||||| | ||||    
T  27604089 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaa 27603990  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||||||||||||||||||||||||| |    |||||  ||||||| |||  || ||| |||||||||||||| ||||||||    
T  27603989 cacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaatgaagattcttttgattctcgatgatgt 27603890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 28781898 - 28782097
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| ||||||||| | |||     
T  28781898 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaag 28781997  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |  | | |||||||||||||||||||||||||||||| |    |||||  ||||||| |||| |||||| | |||||||||||| ||||||||    
T  28781998 cacttcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgt 28782097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27592406 - 27592207
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| |||||| ||||| |||| || ||   ||||||||| |||||||| | ||||||||| | ||||    
T  27592406 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaa 27592307  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||||||| ||||||| || |||||| | |  |||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  27592306 cacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgt 27592207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27677005 - 27676806
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| |||||| ||||| |||| || ||   ||||||||| |||||||| | ||||||||| | ||||    
T  27677005 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaa 27676906  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||||||| ||||||| || |||||| | |  |||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  27676905 cacttcaacttgaaattaagttaggaagtgttagcgaaggaattcctaaaataaaggaaaggctacatggaaagaagattcttttgattcttgatgatgt 27676806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 28787039 - 28787234
Alignment:
Q  24 ctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacagt 123  Q
    |||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| | ||||||| | |||||| |    
T  28787039 ctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggtgctccttttaaaaacact 28787138  T
Q  124 tagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  |  | | |||||||||||||||||||||||||||||| |    |||||  ||||||| |||| |||||| | |||||||||||| ||||||||    
T  28787139 tcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgt 28787234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 28793160 - 28793355
Alignment:
Q  24 ctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacagt 123  Q
    |||||||||||||| | | ||||||||| ||| |||||||||||| |||| || ||   |  ||||||||||||||||| | ||||||| | |||||| |    
T  28793160 ctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagagttcagcttcaaatagattgaaacatctccaggaggtgctccttttaaaaacact 28793259  T
Q  124 tagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  |  | | |||||||||||||||||||||||||||||| |    |||||  |||||||||||| |||||| |||||||||||||| ||||||||    
T  28793260 tcaactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgt 28793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26862378 - 26862576
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||| ||||||||||||||| ||||||||||  |  | || ||||||||||||||||     | |||||||||||||||| | ||||| ||| | |||||    
T  26862378 ttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactcataatagcttgaaacatctccagaaggagcttcttttaaaaac 26862477  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| || | | ||||||||||||| || ||||||||||||| || | |||||  |||| ||| |||||| ||| |||||||||||||| ||||||||    
T  26862478 agttaaattgaacattaagttaggagatgctagtgagggaattccacttataaaggaaagactaaatagaatgaagattcttttgattctcgatgatgt 26862576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 27705788 - 27705590
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||| ||| |    |||||||||||||||| ||  |||| ||||| |||||    
T  27705788 ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaatgacttgaaacatctccaagagaagcttcttctaaaaac 27705689  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||||| | || |||||||    |||| ||||||| ||| || |||||||  |||||||   ||||||||| |||||||||||||| ||||||||    
T  27705688 aactggatcgaaaataaagttagatcatgtttgtgaggggattccattcataaaggaaaggctgtgtagaaagaagattcttttgattctcgatgatgt 27705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26647277 - 26647475
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||| |||| |||||  |  |||| |||||||||||| |||     |||||||||||||||||| | |||||||||   |||||    
T  26647277 ttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaac 26647376  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| |  | | |||||||| |||  | || ||||||||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  26647377 agttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 26647475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26753245 - 26753443
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||| |||| |||||  |  |||| |||||||||||| |||     |||||||||||||||||| | |||||||||   |||||    
T  26753245 ttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaac 26753344  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| |  | | |||||||| |||  | || ||||||||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| ||||||||    
T  26753345 agttaaagtgaacattaagtttggacatatttgtgagggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgt 26753443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 26056719 - 26056918
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    ||||||||||||||||||||| ||||||||||  |  |||| ||||||||||||||||     |||||||||||||||||| |  ||||||||   ||||    
T  26056719 attgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaa 26056818  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
     ||||| ||  ||   | |||||| || |||||||||||||||  |||| |||||  |||| |||  ||||||||| ||||||||||||||||| |||||    
T  26056819 tagttaaatttgacggtcagttagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt 26056918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 25539341 - 25539539
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||| | ||||||||||  |  |||| ||||||||||||| ||     |||||||||||||||||  |  ||||||||   ||||     
T  25539341 ttgctgatcaatttgaagttgtatgttttcttcataatgtcagagagaattcaagtcataataacttgaaacatctccaaaagaagctcctttcaaaaat 25539440  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| ||  ||   |||||||| || ||||||||||||||| |||||||||||  |||| |||  || |||||| |||||||||||||||||||||||    
T  25539441 agttaaatttgacggtaagttagaagatgttagtgagggaataacaatcataaaggaaagactatctaaaaagaagattcttttgattcttgatgatgt 25539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 26803244 - 26803442
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||| ||| |   ||||||||||||||||| ||  |||| ||||| |||||    
T  26803244 ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaac 26803343  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||| | | || |||||||    |||| ||||||| ||| |||| |||||  |||| ||   |||||| || |||||||||||||| ||||||||    
T  26803344 aactggattgaaaatcaagttagatcatgtttgtgaggggattccaattataaaggaaagactgtgtagaaataagattcttttgattctcgatgatgt 26803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 27697970 - 27697772
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||||||||||||||  |  ||||||||  ||||||| ||  |   |||||| |||||||||| ||  |||||||| | |||||    
T  27697970 ttgctgatcaatttgaaggtttatgttttcttcataatgtgagaatgaattcagctaaaaataacttggaacatctccaagagaagctcctttttaaaac 27697871  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||||||| ||||| ||||    ||||||||| |||||| ||||||| ||  ||||||||  ||||||||| |||||||||||||| || |||||    
T  27697870 aactggatcggaaattaatttagaccatgttagtgacggaattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgacgatgt 27697772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 27337482 - 27337281
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    ||||||||||||||||||||||  |||| |||||  |  |||| |||||||||||| |||     |||||||||||||||||| | |||||||||   ||    
T  27337482 tcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaa 27337383  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    |||||||  |  | | ||||||||| ||| ||||  |||||||||| ||||||| ||  ||||||||  ||| ||||| |||||||||||||| ||||||    
T  27337382 aacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttttgattctcgatgat 27337283  T
Q  218 gt 219  Q
    ||    
T  27337282 gt 27337281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 27398222 - 27398021
Alignment:
Q  18 tcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaa 117  Q
    ||||||||||||||||||||||  |||| |||||  |  |||| |||||||||||| |||     |||||||||||||||||| | |||||||||   ||    
T  27398222 tcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaa 27398123  T
Q  118 aacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    |||||||  |  | | ||||||||| ||| ||||  |||||||||| ||||||| ||  ||||||||  ||| ||||| |||||||||||||| ||||||    
T  27398122 aacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattcttttgattctcgatgat 27398023  T
Q  218 gt 219  Q
    ||    
T  27398022 gt 27398021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 26076689 - 26076888
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    ||||||||||||||||||||| ||||||||||  |  |||| ||||||||||||||||     |||||||||||||||||| |  ||||||||   ||||    
T  26076689 attgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaa 26076788  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
     ||||| ||  ||   | || ||| || |||||||||||||||  |||| |||||  |||| |||  ||||||||| ||||||||||||||||| |||||    
T  26076789 tagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt 26076888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 27679748 - 27679946
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||| |||||||| ||||||| |||||||||  | |||||||||||||||||| ||| |   ||||||||| ||||||| ||  |||||||| | |||||    
T  27679748 ttgcagatcaattcgaaggttcatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaatatctccaagagaagctccttttaaaaac 27679847  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |    | | ||| ||||||||||    |||||||||||||||| || |||||||  ||||  ||  ||||||||| |||||||||||||| ||||||||    
T  27679848 aacaggtttggaaattaagttagaccatgttagtgagggaattccagtcataaaggaaagattatgtagaaagaagattcttttgattctcgatgatgt 27679946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 25483857 - 25484055
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaaga-gctccttctgaaaa 119  Q
    |||||||||||||||||||| ||||||||||  |  |||| ||||||||||||| ||     ||| |||||||||||||  |||| |||||||   ||||    
T  25483857 ttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtcataataacctgaaacatctccaa-aagatgctcctttcaaaaa 25483955  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
     ||||| ||  ||   |||||||| || |||||||||||||||  ||||||||||  |||| |||  ||||||||| |||||||||||| ||||||||||    
T  25483956 tagttaaatttgacggtaagttagaagatgttagtgagggaataccaatcataaaggaaagactatctagaaagaagattcttttgattgttgatgatgt 25484055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 25511689 - 25511888
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| || ||||||||||  |  |||| ||||||||||||||||     |||||||||||||||||| |  ||||||||   ||||    
T  25511689 attgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaa 25511788  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
     ||||| ||  ||   | || ||| || |||||||||||||||  |||| |||||  |||| |||  ||||||||| ||||||||||||||||| |||||    
T  25511789 tagttaaatttgacggtcagatagaagatgttagtgagggaataccaattataaaggaaagactatctagaaagaagattcttttgattcttgacgatgt 25511888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 25580520 - 25580718
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||||| ||||||||||  |  |||| ||||||| ||||| ||     |||||||||||||||||  |  | |||||| | | ||     
T  25580520 ttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttcaattcttaataacttgaaacatctccattattatctccttttaataat 25580619  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||| ||   |  ||||||||| || |||||||||||||||| ||||||| ||  |||| |||  ||||||||| |||||||||||| ||||||||||    
T  25580620 agttaaattttactttaagttagtagatgttagtgagggaatttcaatcattaaggaaagactatctagaaagaagattcttttgatttttgatgatgt 25580718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 216
Target Start/End: Complemental strand, 27426996 - 27426801
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||| || ||   | |||||||| | |||||||   |||||||   || ||    
T  27426996 ttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctcctttcaaagac 27426897  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatga 216  Q
    | ||  |  | | |||||||||| || ||| |||||||||||  ||||||||||  ||||| |   ||||||||| |||||||||||||| |||||    
T  27426896 acttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatga 27426801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 27576212 - 27576151
Alignment:
Q  158 ggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||| |||||||||||||||||||||||| ||||||| || | |||||||| ||||||||    
T  27576212 ggaattccaatcataaaacaaaggctacatacaaagaaagttttgttgattctcgatgatgt 27576151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 28097714 - 28097662
Alignment:
Q  134 attaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctaca 186  Q
    |||||||||| || |  ||||||||||||| ||||||||||||||||||||||    
T  28097714 attaagttagcagatactagtgagggaattccaatcataaaacaaaggctaca 28097662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 26824730 - 26824812
Alignment:
Q  134 attaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatga 216  Q
    ||||||||||||||||||||| | || |||  |||||||||| | || ||||  ||||||||| ||||| ||||||| |||||    
T  26824730 attaagttaggaggtgttagtcaaggtattcaaatcataaaagatagactacgcagaaagaaagttcttctgattctcgatga 26824812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28227864 - 28227948
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| |  ||||||||| || || |||| |||||||| ||  |||||||| |||| |||||||| ||||||||    
T  28227864 ttaagttaggagatgtcaacgagggaattccagtcttaaagcaaaggcttcaccgaaagaaagttctattgattctcgatgatgt 28227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 28297010 - 28296926
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| |  ||||||||| |||||||||| |||||||| ||  |||||||  || | |||||||| ||||||||    
T  28297010 ttaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgt 28296926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28326390 - 28326474
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| | ||| ||| || |||||||||| |||||||| ||  |||||||  |||| |||||||| ||||||||    
T  28326390 ttaagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgt 28326474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28504026 - 28504110
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| | ||| ||| || |||||||||| |||||||| ||  |||||||  |||| |||||||| ||||||||    
T  28504026 ttaagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcgatgatgt 28504110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28515063 - 28515147
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| |  ||||||||| |||||||||| |||||||| ||  |||||||  || | |||||||| ||||||||    
T  28515063 ttaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgt 28515147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18678941 - 18678742
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||    | ||||||||||||||||| || |||||| | ||||    
T  18678941 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaa 18678842  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |  | | |||||||||||||||||||||||||||||| |    |||||  |||||||||||| |||||| |||||||||||||| ||||||||    
T  18678841 cactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgt 18678742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18654858 - 18654659
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| |||||||||| |||||| || ||    | ||||||||||||||||| || |||||| | ||||    
T  18654858 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagaaaattcatcttcaaatcaattgaaacatctccaggaggaactccttttaaaaa 18654759  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |  | | |||||||||||||||||||||||||||||| |    |||||  |||||||||||| |||||| |||||||||||||| ||||||||    
T  18654758 cactttcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgt 18654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18730885 - 18730686
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||    | ||||||||||||||||| || |||||| | ||||    
T  18730885 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaa 18730786  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || |   |  | | |||||||||||||||||||||||||||||| |    |||||  |||||||||||| |||||| |||||||||||||| ||||||||    
T  18730785 cactagcactgaaaattaagttaggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgt 18730686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18698781 - 18698582
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||    | ||||||||||||||||| || |||||| | ||||    
T  18698781 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaa 18698682  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || |   |  | | |||||||||||||||||||||||||||||| |    |||||  ||||||| |||| |||||| |||||||||||||| ||||||||    
T  18698681 cactagcactgaaaattaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagattcttttgattctcgatgatgt 18698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18723466 - 18723267
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| | ||||||||||||||| || ||    | ||||||||||||||||| || |||||| | ||||    
T  18723466 attgctgatcaatttgaatgctcatgttttcttgaaaacgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaa 18723367  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |  | | ||||| |||||||||||||||||| ||||| |    |||||  |||||||||||| |||||| |||||||||||||| ||||||||    
T  18723366 cactttcactgaaaattaacttaggaggtgttagtgagagaattccttatataaagaaaaggctacatacaaagaagattcttttgattctcgatgatgt 18723267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 5090203 - 5090138
Alignment:
Q  152 agtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgat 217  Q
    |||||||||||| ||||||||||  |||||||||| ||||||||| ||||||||||||| ||||||    
T  5090203 agtgagggaattccaatcataaagaaaaggctacaaagaaagaaagttcttttgattctcgatgat 5090138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 216
Target Start/End: Original strand, 18074559 - 18074754
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||| || ||   | |||||||| | |||||||   |||||||   || ||    
T  18074559 ttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctcctttcaaagac 18074658  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatga 216  Q
    | ||  |  | | |||||||||| || ||| |||||||||||  ||||||||||  ||||| |   ||||||||| |||||||||||||| |||||    
T  18074659 acttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatga 18074754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 2924 - 2725
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    |||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||| |||   ||||||||| | ||||    
T  2924 attgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatcttcagttggagctccttttaaaaa 2825  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||| ||||||||||||||||||||| |    |||||  |||||||||||||||||||  ||||||||||||||||||||||    
T  2824 cacttcaacttgaaattaagtttggaggtgttagtgagggaattccttatataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgt 2725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 4097 - 3898
Alignment:
Q  20 attgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaa 119  Q
    ||||||||| |||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| ||||||||| | ||||    
T  4097 attgctgatgaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaa 3998  T
Q  120 cagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    || ||  |   || |||||||||||||||||||||||||||||| |    |||||  ||||||| |||  |||||| |||||||||||||| ||||||||    
T  3997 cacttcaacttgaaattaagttaggaggtgttagtgagggaatttctcatataaaggaaaggctgcattcaaagaagattcttttgattctcgatgatgt 3898  T

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Target: scaffold0277; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 219
Target Start/End: Complemental strand, 13056 - 12861
Alignment:
Q  24 ctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacagt 123  Q
    |||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| || |||||| | |||||| |    
T  13056 ctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaacact 12957  T
Q  124 tagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  |  | | | |||||||||| ||||||||||||||||| |    |||||  ||||||| |||| |||||| | |||||||||||| ||||||||    
T  12956 tcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgt 12861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 29273222 - 29273024
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    |||||||||||||||||| ||||||||||||  | |||||||||||||||||| ||  |   ||||||||||||||||| ||  | |||||| | |||||    
T  29273222 ttgctgatcaatttgaagatttatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaacatctccaagagaaactccttttaaaaac 29273123  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  | ||| ||| ||||||||||    |||||||||||| ||| |||| |||||  | ||||||  |||||||||||||||||||||||| ||||||||    
T  29273122 aactggattggaaattaagttagatcatgttagtgaggggattccaattataaaggagaggctaagtagaaagaaaattcttttgattctcgatgatgt 29273024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 8288 - 8483
Alignment:
Q  24 ctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaacagt 123  Q
    |||||||||||||| | | ||||||||| ||| ||||||||||||||||| || ||   || ||||||||||||||||| || |||||| | |||||| |    
T  8288 ctgatcaatttgaatgctcatgttttcttgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaacact 8387  T
Q  124 tagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |  |  | | | |||||||||| ||||||||||||||||| |    |||||  ||||||| |||| |||||| | |||||||||||| ||||||||    
T  8388 tcaacagaaaactaagttaggaagtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagactcttttgattctcgatgatgt 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 216
Target Start/End: Original strand, 60367 - 60562
Alignment:
Q  21 ttgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattcaactccatccaacttgaaacatctccaggaagagctccttctgaaaac 120  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||| || ||   | |||||||| | |||||||   |||||||   || ||    
T  60367 ttgctgatcaatttgaaggtttatgttttcttgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctcctttcaaagac 60466  T
Q  121 agttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatga 216  Q
    | ||  |  | | |||||||||| || ||| |||||||||||  ||||||||||  ||||| |   ||||||||| |||||||||||||| |||||    
T  60467 acttcaactgaaaattaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatga 60562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 16691778 - 16691863
Alignment:
Q  134 attaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    ||||||||||||  ||||||||| |||||| |||| |||||||||||||||||   ||| ||  ||||||||||||| ||||||||    
T  16691778 attaagttaggacatgttagtgaaggaattccaataataaaacaaaggctacaacaaaaaaaggttcttttgattctcgatgatgt 16691863  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 3280552 - 3280622
Alignment:
Q  116 aaaacagttagatcggatattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctaca 186  Q
    ||||| ||| ||| ||| ||||||||||||| |  ||||||||||||| |||||||||| |||||||||||    
T  3280552 aaaactgttggattggacattaagttaggagatagtagtgagggaattccaatcataaagcaaaggctaca 3280622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28362 - 28446
Alignment:
Q  135 ttaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaagaaaattcttttgattcttgatgatgt 219  Q
    |||||||||||| ||| |  ||||||||| || || |||| |||||||| ||  |||||||| |||| |||||||| ||||||||    
T  28362 ttaagttaggagatgtcaacgagggaattccagtcttaaagcaaaggcttcaccgaaagaaagttctattgattctcgatgatgt 28446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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