View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21187_low_11 (Length: 366)
Name: NF21187_low_11
Description: NF21187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21187_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 220 - 350
Target Start/End: Complemental strand, 32867556 - 32867414
Alignment:
| Q |
220 |
actttgacctttttagttaaagaatgaagttttttcagattttaaatttacaaaactattagagtttatcatttgtaattaatta----ttgttaag--- |
312 |
Q |
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| T |
32867556 |
actttcacctttttagttaaagaatgaagttttttcagattttaaatttacaaaactattagagtttatcatttgtaattaattattatttgttaagagt |
32867457 |
T |
|
| Q |
313 |
-----agttagttagtataaggtaaccatagctatattgattt |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
32867456 |
tagttagttagttagtataaggtaaccatagctatattgattt |
32867414 |
T |
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