View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21187_low_24 (Length: 259)

Name: NF21187_low_24
Description: NF21187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21187_low_24
NF21187_low_24
[»] scaffold0001 (1 HSPs)
scaffold0001 (139-249)||(65175-65286)
[»] chr7 (47 HSPs)
chr7 (181-249)||(38578890-38578958)
chr7 (181-249)||(1797478-1797546)
chr7 (181-249)||(13095876-13095944)
chr7 (181-245)||(48804701-48804765)
chr7 (183-245)||(34659246-34659308)
chr7 (185-249)||(3353446-3353510)
chr7 (181-249)||(17748405-17748473)
chr7 (181-249)||(39420855-39420923)
chr7 (193-249)||(41945503-41945559)
chr7 (181-249)||(45960026-45960094)
chr7 (190-249)||(1605968-1606027)
chr7 (190-249)||(19914726-19914785)
chr7 (190-248)||(39474967-39475025)
chr7 (181-238)||(43862006-43862063)
chr7 (190-245)||(4228781-4228836)
chr7 (190-249)||(22973994-22974053)
chr7 (190-249)||(22993390-22993449)
chr7 (190-249)||(27028306-27028365)
chr7 (190-249)||(48551884-48551943)
chr7 (190-249)||(49142692-49142751)
chr7 (181-249)||(26423310-26423378)
chr7 (181-245)||(36619281-36619345)
chr7 (189-245)||(42210289-42210345)
chr7 (190-249)||(5039441-5039500)
chr7 (190-249)||(5069838-5069897)
chr7 (190-249)||(8734709-8734768)
chr7 (190-245)||(14535318-14535373)
chr7 (190-245)||(16802150-16802205)
chr7 (190-249)||(23658206-23658265)
chr7 (190-249)||(30827319-30827378)
chr7 (183-249)||(43346802-43346868)
chr7 (190-239)||(18785696-18785745)
chr7 (204-245)||(24983446-24983487)
chr7 (190-235)||(37514948-37514993)
chr7 (184-249)||(48244379-48244444)
chr7 (181-245)||(10047903-10047967)
chr7 (181-237)||(43925530-43925586)
chr7 (198-245)||(4195229-4195276)
chr7 (190-249)||(14650344-14650403)
chr7 (192-243)||(21190809-21190860)
chr7 (197-248)||(27875112-27875163)
chr7 (190-249)||(28396183-28396242)
chr7 (190-229)||(29805483-29805522)
chr7 (181-239)||(47341894-47341952)
chr7 (197-249)||(38988934-38988986)
chr7 (181-249)||(42032114-42032182)
chr7 (185-249)||(45697213-45697277)
[»] chr3 (66 HSPs)
chr3 (181-249)||(47219159-47219227)
chr3 (181-249)||(41630536-41630604)
chr3 (181-249)||(28572235-28572303)
chr3 (190-249)||(26043836-26043895)
chr3 (190-249)||(29127943-29128002)
chr3 (186-249)||(43330756-43330819)
chr3 (190-244)||(39849095-39849149)
chr3 (190-248)||(54261250-54261308)
chr3 (190-239)||(6462436-6462485)
chr3 (184-249)||(8164571-8164636)
chr3 (190-258)||(3755594-3755662)
chr3 (181-249)||(7328859-7328926)
chr3 (181-249)||(35315971-35316039)
chr3 (185-249)||(47749129-47749193)
chr3 (190-249)||(3507557-3507616)
chr3 (190-249)||(7650251-7650310)
chr3 (186-245)||(25294980-25295039)
chr3 (190-249)||(30045845-30045904)
chr3 (190-249)||(30767271-30767330)
chr3 (190-245)||(49198375-49198430)
chr3 (186-245)||(50405631-50405690)
chr3 (190-249)||(53649751-53649810)
chr3 (181-238)||(29135928-29135985)
chr3 (186-239)||(45877474-45877527)
chr3 (188-248)||(2668083-2668143)
chr3 (185-249)||(3136718-3136782)
chr3 (188-248)||(4638176-4638236)
chr3 (185-249)||(10040575-10040639)
chr3 (181-249)||(26361991-26362059)
chr3 (190-249)||(7648764-7648823)
chr3 (190-249)||(13893950-13894009)
chr3 (198-249)||(15320218-15320269)
chr3 (190-249)||(32873573-32873632)
chr3 (190-249)||(33251686-33251745)
chr3 (190-245)||(42412802-42412857)
chr3 (190-245)||(54237472-54237527)
chr3 (181-239)||(26207835-26207893)
chr3 (188-245)||(2029295-2029352)
chr3 (187-248)||(8362598-8362659)
chr3 (185-245)||(15795522-15795582)
chr3 (185-245)||(24506676-24506736)
chr3 (185-249)||(47471850-47471914)
chr3 (181-245)||(51682982-51683046)
chr3 (190-245)||(29762183-29762238)
chr3 (186-245)||(38394203-38394261)
chr3 (190-249)||(48342044-48342103)
chr3 (202-245)||(49021231-49021274)
chr3 (190-249)||(55069703-55069762)
chr3 (184-238)||(13367442-13367496)
chr3 (183-249)||(23511584-23511650)
chr3 (190-248)||(45402376-45402434)
chr3 (190-248)||(49543543-49543601)
chr3 (186-242)||(34374473-34374529)
chr3 (185-249)||(45450471-45450535)
chr3 (190-249)||(928624-928683)
chr3 (190-245)||(3763074-3763129)
chr3 (190-241)||(10855408-10855459)
chr3 (193-248)||(34662344-34662399)
chr3 (206-249)||(44064584-44064627)
chr3 (190-249)||(47303513-47303572)
chr3 (190-245)||(51060309-51060364)
chr3 (190-249)||(52364824-52364883)
chr3 (184-238)||(33688969-33689023)
chr3 (190-238)||(11687144-11687192)
chr3 (217-249)||(36043698-36043730)
chr3 (185-241)||(41223070-41223126)
[»] chr2 (62 HSPs)
chr2 (181-249)||(38005417-38005485)
chr2 (190-248)||(10823084-10823142)
chr2 (181-249)||(331516-331584)
chr2 (190-249)||(2550892-2550951)
chr2 (190-249)||(3643910-3643969)
chr2 (190-249)||(10026639-10026698)
chr2 (190-249)||(25540427-25540486)
chr2 (190-249)||(34722704-34722763)
chr2 (190-249)||(38962787-38962846)
chr2 (187-248)||(9360772-9360833)
chr2 (181-249)||(8410146-8410214)
chr2 (181-249)||(18902553-18902621)
chr2 (181-249)||(22593150-22593217)
chr2 (181-245)||(44139499-44139563)
chr2 (190-245)||(6358178-6358233)
chr2 (186-245)||(12455330-12455389)
chr2 (183-249)||(10046500-10046565)
chr2 (186-248)||(28525479-28525541)
chr2 (190-248)||(41220659-41220717)
chr2 (190-248)||(44945617-44945675)
chr2 (190-239)||(14169642-14169691)
chr2 (188-249)||(26805318-26805379)
chr2 (185-249)||(24179587-24179651)
chr2 (181-249)||(41031929-41031997)
chr2 (190-249)||(3811714-3811773)
chr2 (186-249)||(3848937-3849000)
chr2 (190-249)||(10669616-10669675)
chr2 (190-249)||(20116635-20116694)
chr2 (190-245)||(27725964-27726019)
chr2 (189-240)||(41187872-41187923)
chr2 (190-249)||(42770674-42770733)
chr2 (190-249)||(45263690-45263749)
chr2 (190-248)||(7747298-7747356)
chr2 (183-249)||(37560190-37560256)
chr2 (197-249)||(7787087-7787139)
chr2 (198-238)||(13026445-13026485)
chr2 (181-245)||(16325610-16325674)
chr2 (193-249)||(19976830-19976886)
chr2 (189-241)||(29653650-29653702)
chr2 (190-242)||(30721885-30721937)
chr2 (185-245)||(35946757-35946817)
chr2 (181-249)||(39806908-39806976)
chr2 (190-249)||(13104848-13104907)
chr2 (185-248)||(33005770-33005833)
chr2 (198-249)||(39201531-39201582)
chr2 (190-240)||(21180346-21180396)
chr2 (188-238)||(21286466-21286516)
chr2 (190-245)||(20612561-20612617)
chr2 (189-249)||(44773286-44773346)
chr2 (181-240)||(2528373-2528432)
chr2 (189-248)||(5035311-5035370)
chr2 (190-245)||(12864248-12864303)
chr2 (198-249)||(18649049-18649100)
chr2 (197-248)||(28616403-28616454)
chr2 (190-249)||(34346310-34346369)
chr2 (206-251)||(29697563-29697608)
chr2 (190-239)||(34130335-34130384)
chr2 (190-235)||(34356230-34356275)
chr2 (185-249)||(16813188-16813252)
chr2 (185-249)||(16852467-16852531)
chr2 (189-249)||(25549751-25549811)
chr2 (183-243)||(43303321-43303381)
[»] chr4 (71 HSPs)
chr4 (186-249)||(5472871-5472934)
chr4 (190-249)||(7246669-7246728)
chr4 (181-249)||(17080063-17080131)
chr4 (181-249)||(38166047-38166115)
chr4 (181-249)||(49260688-49260756)
chr4 (190-249)||(20532432-20532491)
chr4 (183-249)||(40780884-40780950)
chr4 (181-249)||(24166470-24166538)
chr4 (181-245)||(43468367-43468431)
chr4 (190-248)||(42722601-42722659)
chr4 (187-249)||(31588710-31588774)
chr4 (181-245)||(1446846-1446910)
chr4 (181-249)||(16450320-16450388)
chr4 (181-245)||(29895807-29895871)
chr4 (181-249)||(36145238-36145306)
chr4 (190-249)||(4738647-4738706)
chr4 (190-249)||(8889051-8889110)
chr4 (190-249)||(36262790-36262849)
chr4 (186-249)||(38075458-38075521)
chr4 (193-242)||(15839965-15840014)
chr4 (181-249)||(6779231-6779299)
chr4 (181-245)||(8064825-8064889)
chr4 (181-245)||(41339422-41339486)
chr4 (193-249)||(43458645-43458701)
chr4 (181-245)||(47078478-47078542)
chr4 (193-249)||(47682405-47682461)
chr4 (181-249)||(52950102-52950170)
chr4 (190-249)||(2559336-2559395)
chr4 (190-245)||(3159496-3159551)
chr4 (190-249)||(30317262-30317321)
chr4 (181-249)||(1940800-1940865)
chr4 (190-248)||(12703569-12703627)
chr4 (190-244)||(20354666-20354720)
chr4 (190-248)||(38168286-38168343)
chr4 (190-248)||(53599089-53599147)
chr4 (190-247)||(3574471-3574528)
chr4 (190-243)||(48015102-48015155)
chr4 (181-249)||(3507291-3507358)
chr4 (190-246)||(16645147-16645203)
chr4 (190-249)||(27248457-27248514)
chr4 (181-237)||(29588756-29588812)
chr4 (188-240)||(49952178-49952230)
chr4 (181-249)||(55921054-55921122)
chr4 (186-241)||(10541041-10541096)
chr4 (198-249)||(14567276-14567327)
chr4 (185-248)||(28944956-28945018)
chr4 (190-245)||(48317302-48317357)
chr4 (190-245)||(50485972-50486027)
chr4 (197-243)||(33109360-33109406)
chr4 (190-235)||(20421802-20421847)
chr4 (190-239)||(40272364-40272413)
chr4 (198-243)||(54946286-54946331)
chr4 (186-243)||(55005335-55005392)
chr4 (188-244)||(14077973-14078029)
chr4 (181-245)||(14124036-14124100)
chr4 (186-238)||(15829724-15829776)
chr4 (185-249)||(46108715-46108779)
chr4 (190-245)||(295560-295615)
chr4 (194-249)||(6032666-6032721)
chr4 (190-249)||(7741954-7742013)
chr4 (198-249)||(14597923-14597974)
chr4 (202-249)||(14859332-14859379)
chr4 (190-249)||(21192669-21192728)
chr4 (199-242)||(37194848-37194891)
chr4 (190-249)||(41162905-41162964)
chr4 (185-235)||(24850664-24850714)
chr4 (203-249)||(31635770-31635816)
chr4 (186-239)||(23788422-23788475)
chr4 (189-249)||(38841391-38841449)
chr4 (185-245)||(42722406-42722466)
chr4 (189-237)||(55703787-55703835)
[»] chr5 (60 HSPs)
chr5 (181-249)||(9805020-9805088)
chr5 (185-249)||(38897742-38897806)
chr5 (181-249)||(42086343-42086411)
chr5 (190-249)||(39099802-39099861)
chr5 (190-248)||(9168277-9168335)
chr5 (181-249)||(7308387-7308455)
chr5 (193-249)||(14588640-14588696)
chr5 (181-249)||(23383673-23383741)
chr5 (185-245)||(42861245-42861305)
chr5 (190-249)||(7866606-7866665)
chr5 (190-249)||(9812897-9812956)
chr5 (185-248)||(37263260-37263323)
chr5 (190-249)||(40117440-40117499)
chr5 (185-248)||(41163484-41163547)
chr5 (190-249)||(42291528-42291587)
chr5 (191-249)||(14728109-14728167)
chr5 (181-239)||(19572740-19572798)
chr5 (190-248)||(20682641-20682699)
chr5 (190-248)||(24463910-24463968)
chr5 (184-249)||(14974347-14974412)
chr5 (181-245)||(1538447-1538511)
chr5 (183-239)||(41800995-41801051)
chr5 (190-249)||(3653937-3653996)
chr5 (186-249)||(8513540-8513603)
chr5 (190-249)||(11845824-11845883)
chr5 (190-249)||(12081933-12081992)
chr5 (190-249)||(12705039-12705098)
chr5 (190-249)||(12766156-12766215)
chr5 (190-249)||(20255394-20255453)
chr5 (190-245)||(20525863-20525918)
chr5 (190-237)||(20590024-20590071)
chr5 (190-249)||(24875370-24875429)
chr5 (186-249)||(35813021-35813084)
chr5 (190-248)||(5731944-5732002)
chr5 (181-238)||(25417217-25417274)
chr5 (190-246)||(18262644-18262700)
chr5 (181-249)||(30995137-30995205)
chr5 (185-249)||(38369719-38369783)
chr5 (193-249)||(43399156-43399212)
chr5 (190-249)||(5079356-5079415)
chr5 (190-249)||(13664285-13664344)
chr5 (186-249)||(15034096-15034159)
chr5 (181-231)||(28857144-28857194)
chr5 (185-249)||(2485216-2485280)
chr5 (189-241)||(6764488-6764540)
chr5 (185-249)||(18294507-18294571)
chr5 (190-237)||(4016290-4016337)
chr5 (190-245)||(21149759-21149814)
chr5 (197-240)||(22295248-22295291)
chr5 (190-249)||(26077166-26077225)
chr5 (190-249)||(35245029-35245088)
chr5 (215-249)||(28857196-28857230)
chr5 (187-249)||(39728409-39728471)
chr5 (184-249)||(20228736-20228801)
chr5 (198-247)||(30349612-30349661)
chr5 (190-223)||(35403561-35403594)
chr5 (181-249)||(21375368-21375435)
chr5 (190-248)||(21487642-21487697)
chr5 (185-241)||(25452945-25453001)
chr5 (190-238)||(35006769-35006817)
[»] chr6 (38 HSPs)
chr6 (190-249)||(9633648-9633707)
chr6 (181-249)||(5253246-5253314)
chr6 (190-249)||(2271326-2271385)
chr6 (190-249)||(12606458-12606517)
chr6 (190-248)||(21898676-21898734)
chr6 (184-249)||(8888904-8888969)
chr6 (181-244)||(12635833-12635896)
chr6 (190-249)||(17114920-17114979)
chr6 (190-237)||(29444800-29444847)
chr6 (190-249)||(30788876-30788935)
chr6 (190-243)||(14107387-14107440)
chr6 (181-249)||(3587968-3588036)
chr6 (181-249)||(8932680-8932748)
chr6 (181-249)||(8944146-8944214)
chr6 (185-249)||(29333162-29333226)
chr6 (190-249)||(3601112-3601171)
chr6 (190-249)||(8611997-8612056)
chr6 (183-245)||(10311496-10311558)
chr6 (190-244)||(13036032-13036086)
chr6 (185-243)||(13391309-13391367)
chr6 (193-241)||(9366454-9366502)
chr6 (181-249)||(19089517-19089585)
chr6 (190-249)||(5029845-5029904)
chr6 (190-245)||(6606124-6606179)
chr6 (190-249)||(34954642-34954701)
chr6 (185-243)||(10396496-10396554)
chr6 (190-239)||(5333032-5333081)
chr6 (192-237)||(31129207-31129252)
chr6 (190-249)||(8938739-8938798)
chr6 (190-245)||(13468961-13469016)
chr6 (198-245)||(14783447-14783494)
chr6 (187-237)||(11142628-11142678)
chr6 (190-239)||(19230592-19230641)
chr6 (193-245)||(7300212-7300264)
chr6 (181-249)||(9179759-9179827)
chr6 (216-248)||(15643858-15643890)
chr6 (184-232)||(21945311-21945359)
chr6 (190-238)||(32157201-32157249)
[»] chr1 (62 HSPs)
chr1 (181-248)||(43959846-43959913)
chr1 (192-249)||(33498863-33498920)
chr1 (190-249)||(10172995-10173054)
chr1 (190-249)||(10422813-10422872)
chr1 (191-249)||(37339846-37339904)
chr1 (181-239)||(49078130-49078188)
chr1 (181-249)||(17642028-17642096)
chr1 (190-249)||(10336541-10336600)
chr1 (190-249)||(14254292-14254351)
chr1 (186-245)||(33004043-33004102)
chr1 (191-249)||(5063868-5063926)
chr1 (190-248)||(5855547-5855605)
chr1 (191-249)||(33418139-33418197)
chr1 (181-245)||(8764007-8764071)
chr1 (186-238)||(28324615-28324667)
chr1 (190-249)||(16263570-16263629)
chr1 (186-249)||(17092501-17092564)
chr1 (185-240)||(21849238-21849293)
chr1 (190-245)||(26325837-26325892)
chr1 (190-249)||(30927751-30927810)
chr1 (190-249)||(32142870-32142929)
chr1 (190-249)||(34697360-34697419)
chr1 (186-249)||(38791634-38791697)
chr1 (198-249)||(45726457-45726508)
chr1 (190-240)||(12744556-12744606)
chr1 (190-240)||(12755546-12755596)
chr1 (185-239)||(17988694-17988748)
chr1 (190-248)||(45361907-45361965)
chr1 (190-239)||(44969689-44969738)
chr1 (197-249)||(4581706-4581758)
chr1 (189-249)||(5504055-5504115)
chr1 (185-249)||(9659203-9659267)
chr1 (185-249)||(11397913-11397977)
chr1 (181-245)||(18915883-18915947)
chr1 (181-245)||(41663884-41663948)
chr1 (190-238)||(48798105-48798153)
chr1 (181-245)||(50503389-50503453)
chr1 (190-237)||(6563466-6563513)
chr1 (190-245)||(10507723-10507778)
chr1 (190-249)||(12036768-12036827)
chr1 (190-249)||(16956491-16956550)
chr1 (198-245)||(35908791-35908838)
chr1 (190-249)||(46929762-46929821)
chr1 (190-249)||(50371858-50371917)
chr1 (190-248)||(18649377-18649435)
chr1 (188-230)||(19195389-19195431)
chr1 (185-239)||(47312933-47312987)
chr1 (190-239)||(32896-32945)
chr1 (201-246)||(13265974-13266019)
chr1 (193-249)||(34719804-34719860)
chr1 (186-249)||(31576571-31576634)
chr1 (198-249)||(32150946-32150997)
chr1 (186-245)||(42710166-42710225)
chr1 (203-241)||(26660176-26660214)
chr1 (220-249)||(892326-892355)
chr1 (190-239)||(2980965-2981014)
chr1 (204-249)||(6899597-6899642)
chr1 (191-248)||(26258721-26258778)
chr1 (217-249)||(1764221-1764253)
chr1 (189-249)||(2567300-2567360)
chr1 (187-239)||(12150760-12150812)
chr1 (190-230)||(42744803-42744843)
[»] scaffold0291 (1 HSPs)
scaffold0291 (181-249)||(6873-6941)
[»] scaffold0010 (2 HSPs)
scaffold0010 (181-249)||(155734-155802)
scaffold0010 (190-248)||(25808-25866)
[»] chr8 (37 HSPs)
chr8 (185-249)||(4479319-4479383)
chr8 (181-245)||(6042840-6042904)
chr8 (181-249)||(43032920-43032988)
chr8 (190-249)||(583840-583899)
chr8 (190-248)||(10927634-10927692)
chr8 (185-249)||(15884579-15884643)
chr8 (186-249)||(8141126-8141189)
chr8 (190-249)||(18374038-18374097)
chr8 (190-244)||(2467146-2467200)
chr8 (190-248)||(6100500-6100558)
chr8 (185-249)||(45521191-45521255)
chr8 (190-249)||(2964104-2964163)
chr8 (181-244)||(14666099-14666162)
chr8 (190-249)||(22958798-22958857)
chr8 (190-249)||(26570952-26571011)
chr8 (190-248)||(33401823-33401881)
chr8 (181-233)||(8586978-8587030)
chr8 (185-249)||(10535427-10535491)
chr8 (190-246)||(33935761-33935817)
chr8 (190-237)||(21174168-21174215)
chr8 (190-249)||(43027333-43027392)
chr8 (190-248)||(3418537-3418595)
chr8 (189-247)||(18091427-18091485)
chr8 (197-251)||(25848211-25848265)
chr8 (187-249)||(35496278-35496340)
chr8 (188-249)||(24938585-24938646)
chr8 (181-245)||(9860022-9860086)
chr8 (193-249)||(16893968-16894023)
chr8 (181-248)||(1013001-1013068)
chr8 (190-249)||(16291226-16291285)
chr8 (190-249)||(23895596-23895655)
chr8 (190-249)||(24837270-24837329)
chr8 (193-240)||(28333068-28333115)
chr8 (190-245)||(44893305-44893360)
chr8 (190-248)||(27975919-27975977)
chr8 (190-248)||(28033188-28033246)
chr8 (185-249)||(14846598-14846662)
[»] scaffold0209 (1 HSPs)
scaffold0209 (190-249)||(12600-12659)
[»] scaffold0170 (1 HSPs)
scaffold0170 (190-249)||(9872-9931)
[»] scaffold0016 (1 HSPs)
scaffold0016 (181-249)||(8724-8792)
[»] scaffold0004 (2 HSPs)
scaffold0004 (181-249)||(7858-7926)
scaffold0004 (187-245)||(95008-95066)
[»] scaffold0376 (1 HSPs)
scaffold0376 (190-249)||(12697-12756)
[»] scaffold0223 (1 HSPs)
scaffold0223 (186-249)||(16902-16965)
[»] scaffold0009 (1 HSPs)
scaffold0009 (190-249)||(42855-42914)
[»] scaffold0005 (3 HSPs)
scaffold0005 (181-243)||(271103-271165)
scaffold0005 (198-249)||(250048-250099)
scaffold0005 (198-249)||(219404-219455)
[»] scaffold0316 (1 HSPs)
scaffold0316 (190-249)||(1637-1696)
[»] scaffold0002 (1 HSPs)
scaffold0002 (190-249)||(319449-319508)
[»] scaffold0086 (1 HSPs)
scaffold0086 (190-244)||(26210-26264)
[»] scaffold0029 (1 HSPs)
scaffold0029 (183-249)||(41064-41130)
[»] scaffold0006 (1 HSPs)
scaffold0006 (181-249)||(68535-68600)
[»] scaffold0341 (1 HSPs)
scaffold0341 (190-237)||(18659-18706)
[»] scaffold0050 (1 HSPs)
scaffold0050 (182-241)||(72651-72710)
[»] scaffold0384 (1 HSPs)
scaffold0384 (191-245)||(6000-6054)
[»] scaffold0013 (1 HSPs)
scaffold0013 (190-249)||(51758-51813)
[»] scaffold0155 (1 HSPs)
scaffold0155 (190-239)||(19282-19331)
[»] scaffold0116 (1 HSPs)
scaffold0116 (186-245)||(17413-17472)


Alignment Details
Target: scaffold0001 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 65286 - 65175
Alignment:
Q  139 acccttttaactattagactagttttcttcttatatttttt-acccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  65286 acccttttaactattagactagttttcttcttatatttttttacctaaggggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagt 65187  T
Q  238 cgcccacctttg 249  Q
    ||| ||| ||||    
T  65186 cgctcacttttg 65175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 38578958 - 38578890
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38578958 cccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttg 38578890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 1797478 - 1797546
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||    
T  1797478 cccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtcgtccatctttg 1797546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 13095876 - 13095944
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  13095876 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttg 13095944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 48804701 - 48804765
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48804701 cccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 48804765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 34659246 - 34659308
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  34659246 caaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 34659308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 3353446 - 3353510
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||  |||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  3353446 agggaaacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 3353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 17748473 - 17748405
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  17748473 cccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttg 17748405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 39420855 - 39420923
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||| | |||||||    
T  39420855 cccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttg 39420923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 41945503 - 41945559
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 41945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 45960094 - 45960026
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||| ||||| ||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  45960094 cccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggattagtcgctcacctttg 45960026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 1605968 - 1606027
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||    
T  1605968 aacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttg 1606027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 19914785 - 19914726
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||    
T  19914785 aacaacgcttggccaatgcgcatgcctctacgcatgagccagattaatcgcccacctttg 19914726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 39474967 - 39475025
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||    
T  39474967 aacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 39475025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 43862063 - 43862006
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  43862063 cccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 43862006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 4228836 - 4228781
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||    
T  4228836 aacaacgtttggccagtgcacatgcccctacgcatgagccggattagtcgcccacc 4228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 22973994 - 22974053
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| |||||  |||||||||||||| ||||||||| |||||||||    
T  22973994 aacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttg 22974053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 22993449 - 22993390
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| ||||| ||||||||| || ||||||||||||| ||||||||    
T  22993449 aacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacctttg 22993390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 27028306 - 27028365
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  27028306 aacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttg 27028365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 48551884 - 48551943
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||||||| |||||||| ||||||| ||||||||||||||||| |||||||||    
T  48551884 aacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttg 48551943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 49142751 - 49142692
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| |||||||| |||| ||||||||| ||||||||||||| |||||||||||    
T  49142751 aacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttg 49142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 26423378 - 26423310
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||||||||||||||||||| | || ||||||||| ||||| |||||||||  ||||||||    
T  26423378 cccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttg 26423310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 36619345 - 36619281
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| |||| |||||| ||||| ||||||||||||||||||||||||| |||||    
T  36619345 cccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccacc 36619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 42210345 - 42210289
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  42210345 aaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccacc 42210289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 5039500 - 5039441
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||| |||||| |||  |||||||||||||||||||||||||| ||||||||    
T  5039500 aacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttg 5039441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 5069897 - 5069838
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| || |||| ||||| |||||||||  ||||||||||||||||||||||||    
T  5069897 aacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccacctttg 5069838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 8734768 - 8734709
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||| ||||||||||| ||| ||||| ||||| |||||||||||||||||||    
T  8734768 aacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttg 8734709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 14535318 - 14535373
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  14535318 aacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccacc 14535373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 16802150 - 16802205
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| |||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  16802150 aacaacgattggccagtgcgtatgcctctacgcacgagccggattagtcgctcacc 16802205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 23658206 - 23658265
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||||||| ||| |||||    
T  23658206 aacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttg 23658265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 30827319 - 30827378
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||| |||||| ||||||||| ||||||||||||||| | |||||||    
T  30827319 aacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtctacctttg 30827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 43346868 - 43346802
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | |||||||||||||||| || |||||    
T  43346868 caaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtcgctcatctttg 43346802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 18785696 - 18785745
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||| ||||||||||||||||| |||||||||||| | ||||||||||    
T  18785696 aacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcg 18785745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 24983487 - 24983446
Alignment:
Q  204 agtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccacc 24983446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 37514948 - 37514993
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggatta 235  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||    
T  37514948 aacaacgtttggtcagtgcgcatgtctctacgcacgagccggatta 37514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 48244444 - 48244379
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| ||||| |||||  |||||||  || |||||||||||||||||||||||||| ||||||||    
T  48244444 aaggggaacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttg 48244379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 10047967 - 10047903
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||||||| | |||||||||||||| | |||||||| |||||    
T  10047967 cccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccacc 10047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 43925530 - 43925586
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||| ||| |||||| ||||| ||||||||||| |||||||||||||| ||||||||    
T  43925530 cccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 4195276 - 4195229
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||| |||||||||| |||||||||||||||||||||| || |||||    
T  4195276 ttggctagtgcgcatgcctctacgcatgagccggattagccgtccacc 4195229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 14650344 - 14650403
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| ||||| |||||||  ||| ||||||||||||||||| |||||||| ||||||||    
T  14650344 aacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtcgctcacctttg 14650403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 21190860 - 21190809
Alignment:
Q  192 caacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    ||||||||||| |||||||||| ||||||||| ||| | |||||||||||||    
T  21190860 caacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgccca 21190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 27875163 - 27875112
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||| |||| ||||||||||||| || |||||||| ||||||||    
T  27875163 cttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccaccttt 27875112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 28396242 - 28396183
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||  ||||||||| || |||||||||||||||||||||| | |||||||    
T  28396242 aacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttg 28396183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 29805522 - 29805483
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagcc 229  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  29805522 aacaacgtttggtcagtgcgcatgtctctacgcatgagcc 29805483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 47341894 - 47341952
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||| |||| ||||| ||||    
T  47341894 cccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcg 47341952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 38988934 - 38988986
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||| |||| |||||||||||| ||||||||||||| || |||||    
T  38988934 cttggtcagtgcacatgcctctacgcatgaaccggattagtcgctcatctttg 38988986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 42032114 - 42032182
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||| ||||||||||| |||   ||||||||||||||| |||||| | |||||||||    
T  42032114 cccacggggaacaacgtttggccagtgcacatacatctacgcatgagccgaattagttgtccacctttg 42032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 45697277 - 45697213
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| ||||  ||||||||||| |||||||||||||  || ||||||| |||||||||    
T  45697277 aggggaacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttg 45697213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 47219159 - 47219227
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  47219159 cccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 47219227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 41630604 - 41630536
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  41630604 cccaaggggaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtcgcccacctttg 41630536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 28572303 - 28572235
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||    
T  28572303 cccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttg 28572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 26043836 - 26043895
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  26043836 aacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttg 26043895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 29127943 - 29128002
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29127943 aacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttg 29128002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 43330819 - 43330756
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  43330819 gggaaacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 43330756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 39849095 - 39849149
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  39849095 aacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 54261250 - 54261308
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  54261250 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 54261308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 6462436 - 6462485
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6462436 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 8164571 - 8164636
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||    
T  8164571 aaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttg 8164636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 3755594 - 3755662
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttgctactcctc 258  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |||||    
T  3755594 aacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctacctttggtaatcctc 3755662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 7328859 - 7328926
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  7328859 cccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttg 7328926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 35315971 - 35316039
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  35315971 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttg 35316039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 47749193 - 47749129
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  47749193 aggggaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttg 47749129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 3507616 - 3507557
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  3507616 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttg 3507557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7650251 - 7650310
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  7650251 aacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttg 7650310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 25294980 - 25295039
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  25294980 gggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccacc 25295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 30045845 - 30045904
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||    
T  30045845 aacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttg 30045904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 30767330 - 30767271
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  30767330 aacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttg 30767271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 49198375 - 49198430
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  49198375 aacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 49198430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 50405690 - 50405631
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||    
T  50405690 gggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccacc 50405631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 53649751 - 53649810
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  53649751 aacaacacttggccagtgcgcctgtctctacgcatgagccggattagtcgttcacctttg 53649810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 29135928 - 29135985
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  29135928 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 45877474 - 45877527
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  45877474 gggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 2668083 - 2668143
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||| |||||||    
T  2668083 gaaacaacacttggccagtgcgcatgcctctacgcaagagctggattagtcgctcaccttt 2668143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 3136782 - 3136718
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  3136782 aggggaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttg 3136718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 4638176 - 4638236
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||||| |||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  4638176 gaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagtagcccaccttt 4638236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 10040575 - 10040639
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||| | |||| |||||||||    
T  10040575 aggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccacctttg 10040639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 26362059 - 26361991
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| ||||||| |||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  26362059 cccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttg 26361991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7648764 - 7648823
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||| |||||||||||  ||||||||| |||||||||||||||||||||||||    
T  7648764 aacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 13893950 - 13894009
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||| || |||||||| |||||| || |||||||||||||||||||||||||    
T  13893950 aacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttg 13894009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 15320218 - 15320269
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  15320218 ttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttg 15320269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 32873632 - 32873573
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| ||||||| |||| ||||||| ||||||| |||||||||||||||||||    
T  32873632 aacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtcgcccacctttg 32873573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 33251686 - 33251745
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  33251686 aacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttg 33251745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 42412857 - 42412802
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||    
T  42412857 aacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtcgctcacc 42412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 54237472 - 54237527
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  54237472 aacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccacc 54237527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 26207893 - 26207835
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||| ||| ||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  26207893 cccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 2029352 - 2029295
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||||||  ||| |||||| |||||||||||||| ||||||||||||||||    
T  2029352 gaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccacc 2029295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 8362598 - 8362659
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||| ||||||||| |||||| |||||||||||||||  |||||||| ||||||||    
T  8362598 ggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccaccttt 8362659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 15795582 - 15795522
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| |||||||||||| ||||||||||| ||||||||| |||| | ||||||||||||||    
T  15795582 aggggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtcgcccacc 15795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 24506736 - 24506676
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||||||| ||||||| |||| ||||||||||||| | |||||||||| ||||    
T  24506736 agggaaacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcacc 24506676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 47471850 - 47471914
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||| ||||||| ||||||||||  ||||||||||||||| |||||||| |||||||||    
T  47471850 aggggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttg 47471914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 51683046 - 51682982
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| ||||||||||| |||||||||||| |||| | || |||||||||||||||||||||    
T  51683046 cccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtcgcccacc 51682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 29762238 - 29762183
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  29762238 aacaacacttggccagtgcgcatgcctctatgcatgagctggattagtcgtccacc 29762183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 38394261 - 38394203
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||||| ||| |||||| |||| ||||||||||||||||||||||| ||||||    
T  38394261 gggaaacaacgctcggc-agtgcgtatgtttctacgcatgagccggattagtcacccacc 38394203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 48342044 - 48342103
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||||| ||| |||||    
T  48342044 aacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttg 48342103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 49021274 - 49021231
Alignment:
Q  202 ccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||| ||||||||||||||||||||||||| |||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 49021231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 55069762 - 55069703
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||||||||||| |||| ||||||||| ||||||||||| |||| ||||||||    
T  55069762 aacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttg 55069703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 13367442 - 13367496
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||| |||||||||||| ||||| ||||| || |||||||||||||||||||||    
T  13367442 aaggggaacaacgcttggtcagtgtgcatgcctttacgcatgagccggattagtc 13367496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 23511584 - 23511650
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| | ||||| ||| |||||||||||| ||||||||||||| ||||||| ||| |||||||||    
T  23511584 caaggggagcaacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttg 23511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 45402434 - 45402376
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| || |||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  45402434 aacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 45402376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 49543543 - 49543601
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||| |||| ||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  49543543 aacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtcgcccaccttt 49543601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 34374529 - 34374473
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccc 242  Q
    |||||||||| ||||| ||||||||||| ||| |||||| || ||||||||||||||    
T  34374529 gggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgccc 34374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 45450535 - 45450471
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||| ||||| |||||||||||| |||||||||| |||  ||||||||| |||||||||    
T  45450535 aggggaacaatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttg 45450471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 928624 - 928683
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||| |||||||||||| | ||||||| ||||||||||||||  |||||||||    
T  928624 aacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttg 928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 3763074 - 3763129
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||| ||||| ||||||||||||||| || | |||||||||| |||||    
T  3763074 aacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtcgtccacc 3763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 10855408 - 10855459
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    ||||||||||||||||| |||||| ||||||||| || ||| ||||||||||    
T  10855408 aacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtcgcc 10855459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 34662399 - 34662344
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| |||| |||| |||||||||||| |||||||||| |||||||| ||||||||    
T  34662399 aacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccaccttt 34662344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 44064584 - 44064627
Alignment:
Q  206 tgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttg 44064627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 47303572 - 47303513
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||| |||||| |||| |||||| |||||||||||||||||| | |||||||    
T  47303572 aacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtcaacctttg 47303513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 51060364 - 51060309
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||| ||||||||||| |||||||||||| | |||||||||| |||||    
T  51060364 aacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccacc 51060309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 52364883 - 52364824
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||||| ||| | |||||||    
T  52364883 aacaacgcttgaccagtgcgcatgcctctacgcacgagctggattaatcgtctacctttg 52364824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 33688969 - 33689023
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||| || ||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  33688969 aaggggaataacacttggccagtgcgcatgcctctacgcatgagccagtttagtc 33689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 11687192 - 11687144
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||| |||||||||||||||||| ||||||| ||||| | ||||||||    
T  11687192 aacaatgcttggccagtgcgcatgcctctacgtatgagtcagattagtc 11687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 36043730 - 36043698
Alignment:
Q  217 ctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||||||||||||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttg 36043698  T

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Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 41223126 - 41223070
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    |||||||||||| ||||||| |||||||| |||||||||| || | ||||| |||||    
T  41223126 agggaaacaacgtttggccaatgcgcatgcctctacgcataagtctgattaatcgcc 41223070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 38005417 - 38005485
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  38005417 cccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttg 38005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 10823084 - 10823142
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10823084 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 10823142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 331516 - 331584
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  331516 cccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctttg 331584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 2550892 - 2550951
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2550892 aacaacacttagccagtgcgcatgtctctacgcatgagccggattagtcgcccacttttg 2550951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 3643969 - 3643910
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  3643969 aacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttg 3643910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 10026698 - 10026639
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10026698 aacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttg 10026639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 25540486 - 25540427
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  25540486 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 25540427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 34722704 - 34722763
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  34722704 aacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttg 34722763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 38962787 - 38962846
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  38962787 aacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttg 38962846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 9360833 - 9360772
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  9360833 ggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccaccttt 9360772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 8410146 - 8410214
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  8410146 cccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttg 8410214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 18902621 - 18902553
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  18902621 cccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccacctttg 18902553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 22593150 - 22593217
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  22593150 cccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 22593217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 44139499 - 44139563
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  44139499 cccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccacc 44139563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 6358233 - 6358178
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  6358233 aacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 6358178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 12455330 - 12455389
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||    
T  12455330 gggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcacc 12455389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 10046565 - 10046500
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||| |||||||||    
T  10046565 caagggaaacaacgtttgac-agtgcgcatgcctctacgcatgagccggattagtcgaccacctttg 10046500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 28525541 - 28525479
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  28525541 gggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 41220659 - 41220717
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||  |||||||    
T  41220659 aacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcaccttt 41220717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 44945617 - 44945675
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||    
T  44945617 aacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 44945675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 14169691 - 14169642
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14169691 aacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcg 14169642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 26805318 - 26805379
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| ||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  26805318 gaaacgacgtttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttg 26805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 24179587 - 24179651
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| |||||    
T  24179587 aggggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttg 24179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 41031997 - 41031929
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||    
T  41031997 cccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttg 41031929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 3811773 - 3811714
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||| || |||||||| ||||||||||||||||||||| |||||||||||||    
T  3811773 aacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttg 3811714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 3849000 - 3848937
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||  ||||||||    
T  3849000 gggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttg 3848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10669616 - 10669675
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| |||  ||||||||    
T  10669616 aacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttg 10669675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 20116694 - 20116635
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||| || |||||||||    
T  20116694 aacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttg 20116635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 27725964 - 27726019
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  27725964 aacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccacc 27726019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 41187872 - 41187923
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  41187872 aaacaacgcttgaccagtgcgcatgcctctacgcatgagacggattagtcgc 41187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42770733 - 42770674
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||    
T  42770733 aacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttg 42770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 45263749 - 45263690
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| |||| || |||||    
T  45263749 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttg 45263690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 7747298 - 7747356
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||  |||||||    
T  7747298 aacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcaccttt 7747356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 37560190 - 37560256
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||| |||| ||||||||||| ||||||||| ||||||||||| ||| |||||||||    
T  37560190 caaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatcgtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 7787087 - 7787139
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||    
T  7787087 cttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttg 7787139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 13026485 - 13026445
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  13026485 ttggccagtgcgcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 16325610 - 16325674
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||| ||||| ||||||||||||||| ||||||||| |||||    
T  16325610 cccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccacc 16325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 19976886 - 19976830
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||| |||||||||||||||||||||| || || ||||||||||||||||||    
T  19976886 aacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacctttg 19976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 29653650 - 29653702
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||    
T  29653650 aaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcgcc 29653702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 30721937 - 30721885
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccc 242  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  30721937 aacaacacttggtcagtgcgcatgtctctacgtatgagtcggattagtcgccc 30721885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 35946757 - 35946817
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||||||||||||||| || ||||| ||||||||| ||||||||||||||| |||||    
T  35946757 aggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtccacc 35946817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 39806976 - 39806908
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||| |||||||||||||||| |||||| || ||| ||||||||||  |||||||||    
T  39806976 cccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctttg 39806908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 13104907 - 13104848
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||||||||   |||||||| | |||||||    
T  13104907 aacaacgcttggccagtgcgcatgcctctacgcatgagctaaattagtcgtctacctttg 13104848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 33005770 - 33005833
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| |||||| ||||||||||||||||| ||||||||||||| | ||||| |||| |||||||    
T  33005770 aggggaacaacacttggccagtgcgcatgcctctacgcatgaggcagattaatcgctcaccttt 33005833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 39201582 - 39201531
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||| |||||||||||||||||||||||||  ||||||||    
T  39201582 ttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttg 39201531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 21180396 - 21180346
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    |||||| |||||||||||| |||| ||||||||| ||||||||||||||||    
T  21180396 aacaacacttggccagtgcacatgcctctacgcacgagccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 21286466 - 21286516
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||||||||||| |||||||||||| ||||||||| |||| |||||||||    
T  21286466 gaaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattagtc 21286516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 20612617 - 20612561
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagcc-ggattagtcgcccacc 245  Q
    |||||| ||||||||||||||||| ||||| ||||||||| |||||||||| |||||    
T  20612617 aacaacacttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccacc 20612561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 44773286 - 44773346
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||| ||||| ||||  || ||||||||||||||||| ||||||||    
T  44773286 aaacaacgtttggccagtgtgcatgcctctgtgcgtgagccggattagtcgctcacctttg 44773346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 2528432 - 2528373
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    |||| ||| |||||||||||| ||||| ||||| |||||| ||| |||||||||||||||    
T  2528432 cccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagtcgc 2528373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 5035311 - 5035370
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| ||  ||||||||    
T  5035311 aaacaatgcttgaccagtgcgcatgtctctacgcacgaaccggattaatcatccaccttt 5035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 12864248 - 12864303
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||| ||||||||||| |||| |||||||||| ||||||||| |||||    
T  12864248 aacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccacc 12864303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 18649100 - 18649049
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  18649100 ttgggcagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttg 18649049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 28616454 - 28616403
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  28616454 cttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatcttt 28616403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34346369 - 34346310
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||| ||||| ||||||||||||| | ||||| |||| ||||||||    
T  34346369 aacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttg 34346310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 29697563 - 29697608
Alignment:
Q  206 tgcgcatgtctctacgcatgagccggattagtcgcccacctttgct 251  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||    
T  29697563 tgcgcatgtctctacgcatgagttagattagtcgctcacctttgct 29697608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 34130384 - 34130335
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    ||||||| ||| ||| ||| |||||||||||||||||||| |||||||||    
T  34130384 aacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcg 34130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34356230 - 34356275
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggatta 235  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||    
T  34356230 aacaacacttggtcagtgcgcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 16813252 - 16813188
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| ||| ||||| |||||| ||||| ||| ||||||||||||||| ||| |||||    
T  16813252 aggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttg 16813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 16852531 - 16852467
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| ||| ||||| |||||| ||||| ||| ||||||||||||||| ||| |||||    
T  16852531 aggggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttg 16852467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 25549751 - 25549811
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||  ||||| ||||| |||| ||||||||| ||||||||||||||| ||| |||||    
T  25549751 aaacaacatttggctagtgcacatgcctctacgcacgagccggattagtcgtccatctttg 25549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 43303381 - 43303321
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||||| ||||||||||| ||||| |||||| ||||| ||| |||| |||||| |||||||    
T  43303381 caaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggattaatcgccca 43303321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 5472934 - 5472871
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  5472934 gggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 5472871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 7246728 - 7246669
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7246728 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttg 7246669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 17080063 - 17080131
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17080063 cccatggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttg 17080131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 38166047 - 38166115
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  38166047 cccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttg 38166115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 49260756 - 49260688
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  49260756 cccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttg 49260688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 20532491 - 20532432
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  20532491 aacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttg 20532432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 40780950 - 40780884
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  40780950 caaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 40780884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 24166470 - 24166538
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||||| ||||||||||    
T  24166470 cccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttg 24166538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 43468367 - 43468431
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  43468367 cccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccacc 43468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 42722659 - 42722601
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  42722659 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 42722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 31588710 - 31588774
Alignment:
Q  187 ggaaacaacgct--tggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31588710 ggaaacaacgctcttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttg 31588774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 1446846 - 1446910
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  1446846 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 16450320 - 16450388
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  16450320 cccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttg 16450388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 29895807 - 29895871
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  29895807 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 29895871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 36145306 - 36145238
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||  ||||||||||| |||||| |||||||||||||||||| |||||||||    
T  36145306 cccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacctttg 36145238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 4738647 - 4738706
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||    
T  4738647 aacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttg 4738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 8889051 - 8889110
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8889051 aacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttg 8889110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 36262849 - 36262790
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||    
T  36262849 aacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttg 36262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 38075458 - 38075521
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| | | |||||||||    
T  38075458 gggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttg 38075521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 15840014 - 15839965
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccc 242  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  15840014 aacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgccc 15839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 6779231 - 6779299
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| | ||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  6779231 cccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttg 6779299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 8064889 - 8064825
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||| || ||| |||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  8064889 cccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 8064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 41339486 - 41339422
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||| |||||||||||||||||| | ||| ||||||||| ||| |||||||||||||||||    
T  41339486 cccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgagacggattagtcgcccacc 41339422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 43458645 - 43458701
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  43458645 aacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttg 43458701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 47078478 - 47078542
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| ||||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||    
T  47078478 cccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcacc 47078542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 47682461 - 47682405
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  47682461 aacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttg 47682405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 52950102 - 52950170
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| |||||| ||||| || ||||||||| |||||||||    
T  52950102 cccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttg 52950170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 2559336 - 2559395
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||||||||  |||||||||| ||| |||||||||    
T  2559336 aacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttg 2559395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 3159551 - 3159496
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||    
T  3159551 aacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcacc 3159496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 30317262 - 30317321
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||| || ||| ||||||||| |||||| ||||||||||||||||||    
T  30317262 aacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttg 30317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 1940865 - 1940800
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||    
T  1940865 cccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 1940800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 12703627 - 12703569
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||| |||||| | |||||||||||||| |||||||||||||||||| ||||    
T  12703627 aacaacgcttgaccagtgtgtatgtctctacgcataagccggattagtcgcccatcttt 12703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 20354666 - 20354720
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||    
T  20354666 aacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccac 20354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 38168286 - 38168343
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||    
T  38168286 aacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcaccttt 38168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 53599089 - 53599147
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||  |||||||    
T  53599089 aacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcaccttt 53599147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 3574528 - 3574471
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctt 247  Q
    |||||| ||||||||||||||||| ||||||||| ||| |||||||||||| ||||||    
T  3574528 aacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtcgctcacctt 3574471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 48015155 - 48015102
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||| |||||    
T  48015155 aacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagccca 48015102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 3507291 - 3507358
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||||||||| ||||||| || |||||| || ||||||||||||||| |||||||||    
T  3507291 cccaagggaa-caacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttg 3507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 16645147 - 16645203
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacct 246  Q
    |||||||||||||||||| ||||| |||||| |||||| | ||||||||||||||||    
T  16645147 aacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacct 16645203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 27248457 - 27248514
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||  |||||| ||||||||| ||||| |||||||||||||||||||    
T  27248457 aacaacgcttggccag--cgcatgcctctacgcaggagccagattagtcgcccacctttg 27248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 29588756 - 29588812
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||| |||||||||||||    
T  29588756 cccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 49952230 - 49952178
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    ||||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  49952230 gaaacaacgtttggtcagtgcgcacgcctctacgcatgagccggattagtcgc 49952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 55921054 - 55921122
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||||    
T  55921054 cccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttg 55921122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 10541041 - 10541096
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||| ||||| |||||    
T  10541041 gggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcgcc 10541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 14567276 - 14567327
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| ||||||||| |||||||||||||||| | ||||||    
T  14567276 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttg 14567327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 28944956 - 28945018
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  28944956 agggaaacaacg-ttgaccagtgcacatgtctctacgcatgagtcggattagtcgtccatcttt 28945018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 48317357 - 48317302
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||| ||||| | ||| ||||||||| |||||||||||||||||||||    
T  48317357 aacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccacc 48317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 50485972 - 50486027
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| ||||||||  |||||| ||||||||| |||||||||||||||||||||    
T  50485972 aacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccacc 50486027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 33109360 - 33109406
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||    
T  33109360 cttggccagtacgcatgtctctacgcacgagccggattagttgccca 33109406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20421802 - 20421847
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggatta 235  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||    
T  20421802 aacaacacttggccagtgcgcatgcctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 40272413 - 40272364
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||||||||||||||||| |||||||||| || |||||| ||||    
T  40272413 aacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcg 40272364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 54946286 - 54946331
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||    
T  54946286 ttggtcagtccgcatgcctctacgcatgagccggattagtcgccca 54946331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 55005392 - 55005335
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    ||||||||||||||| ||| |||||||| |||||||||  || |||||||||||||||    
T  55005392 gggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagtcgccca 55005335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 14077973 - 14078029
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||||| | ||||| ||||||||||||||||||||| ||| |||||||||| |||||    
T  14077973 gaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtcacccac 14078029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 14124036 - 14124100
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| ||||||  |||||||||||||||| |||||| || |||||||||||||||| ||||    
T  14124036 cccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcacc 14124100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 15829724 - 15829776
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||| |||| |||||||||||||||||  |||| ||||||||||||||||||    
T  15829724 gggaatcaacacttggccagtgcgcatgcttctaggcatgagccggattagtc 15829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 46108715 - 46108779
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||  ||||| |||||||||| ||||||||||||||| ||||||||| |||| ||||    
T  46108715 aggggaacaacatttggctagtgcgcatgcctctacgcatgagccagattagtcgtccacttttg 46108779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 295615 - 295560
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| |||||||||||||||| ||||||||| || || ||||||||| |||||    
T  295615 aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccacc 295560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 6032721 - 6032666
Alignment:
Q  194 acgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||||||| |||| ||||||| ||||||||||||||||| | |||||||    
T  6032721 acgcttgaccagtgctcatgcctctacgaatgagccggattagtcgtctacctttg 6032666  T

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Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7741954 - 7742013
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||||||| || || ||||||||| ||| |||||    
T  7741954 aacaacgcttggccagtgcacatgcctctacgcacgatccagattagtcgtccatctttg 7742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 14597974 - 14597923
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| ||||||||| || | |||||||||| |||||||||    
T  14597974 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttg 14597923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 14859332 - 14859379
Alignment:
Q  202 ccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||| ||||| ||||||||  |||||||||    
T  14859332 ccagtgcgcatgtctctacgcacgagccagattagtcatccacctttg 14859379  T

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Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 21192669 - 21192728
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| | |||||||||||||| ||||||||| ||| ||||||| |||||||| ||||    
T  21192669 aacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttg 21192728  T

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Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 37194848 - 37194891
Alignment:
Q  199 tggccagtgcgcatgtctctacgcatgagccggattagtcgccc 242  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||    
T  37194848 tggccagtgcacatgcctctacgcatgagccggattagttgccc 37194891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 41162964 - 41162905
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||||  ||||  |||| |||||||||| ||||||||||||||||||    
T  41162964 aacaacacttggccagtgtacatgcttctatgcatgagccgaattagtcgcccacctttg 41162905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 24850714 - 24850664
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggatta 235  Q
    |||| |||||| |||| |||||||||||| |||||||||||||| ||||||    
T  24850714 aggggaacaacacttgaccagtgcgcatgcctctacgcatgagctggatta 24850664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 31635816 - 31635770
Alignment:
Q  203 cagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||  |||||| ||||||| |||||    
T  31635816 cagtgcgcatgtctctacgcatgagttggattaatcgcccatctttg 31635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 23788422 - 23788475
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    ||||||||||| || | ||||||||||| ||||||||| |||| ||||||||||    
T  23788422 gggaaacaacgtttagtcagtgcgcatgcctctacgcacgagctggattagtcg 23788475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 38841449 - 38841391
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||| | |||||  ||||||||||||||||| ||||||||||| ||| |||||    
T  38841449 aaacaacgcttgtctagtgc--atgtctctacgcatgagtcggattagtcgtccatctttg 38841391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 42722466 - 42722406
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| |||||| |||| |||||||||||  ||||| ||||||| ||||||||||| |||||    
T  42722466 aggggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtccacc 42722406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 55703835 - 55703787
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||||| |||| ||||||||||||||| || || |||||||||||||    
T  55703835 aaacaacgtttggtcagtgcgcatgtctcaacccacgagccggattagt 55703787  T

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Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 9805020 - 9805088
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  9805020 cccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 9805088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 38897806 - 38897742
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  38897806 aggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttg 38897742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 42086343 - 42086411
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  42086343 cccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 42086411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 39099861 - 39099802
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  39099861 aacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttg 39099802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 9168335 - 9168277
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  9168335 aacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 9168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 7308455 - 7308387
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  7308455 cccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcgctcacctttg 7308387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 14588696 - 14588640
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  14588696 aacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 14588640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 23383673 - 23383741
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  23383673 cccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttg 23383741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 42861305 - 42861245
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  42861305 agggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccacc 42861245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7866606 - 7866665
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  7866606 aacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttg 7866665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 9812897 - 9812956
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  9812897 aacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttg 9812956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 37263260 - 37263323
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||    
T  37263260 aggggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccaccttt 37263323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 40117440 - 40117499
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||    
T  40117440 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttg 40117499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 41163547 - 41163484
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  41163547 aggggaacaacgtttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttt 41163484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42291587 - 42291528
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||    
T  42291587 aacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttg 42291528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 14728109 - 14728167
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||    
T  14728109 acaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttg 14728167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 19572740 - 19572798
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19572740 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcg 19572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 20682699 - 20682641
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||    
T  20682699 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccaccttt 20682641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 24463968 - 24463910
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  24463968 aacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 14974412 - 14974347
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| ||||||  ||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  14974412 aaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtcgtccacctttg 14974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 1538447 - 1538511
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  1538447 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccacc 1538511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 41800995 - 41801051
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  41800995 caaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcg 41801051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 3653996 - 3653937
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||| ||| ||||||||||| |||||||||    
T  3653996 aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttg 3653937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 8513540 - 8513603
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||| ||||||||||||| |||| ||||||||| ||||| ||||||||| |||||||||    
T  8513540 gggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttg 8513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 11845883 - 11845824
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||||||||| ||||||| |||||||| |||| |||||||||||||    
T  11845883 aacaacgtttggccagtgcgcatgcctctacgtatgagccgaattaatcgcccacctttg 11845824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12081933 - 12081992
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||||||| |||||||||    
T  12081933 aacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttg 12081992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12705039 - 12705098
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  12705039 aacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttg 12705098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12766156 - 12766215
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||||||||| ||||| |||||||||||| || |||||||||||||||||||    
T  12766156 aacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacctttg 12766215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 20255394 - 20255453
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||| |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  20255394 aacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttg 20255453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 20525863 - 20525918
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  20525863 aacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 20525918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 20590024 - 20590071
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  20590024 aacaacgcttggccagtgcgcatgactctacgcatgagccgtattagt 20590071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 24875370 - 24875429
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  24875370 aacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 35813084 - 35813021
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| || ||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  35813084 gggaaataatgcttgaccagtgcgcatgtctctacacatgagtcggattagtcgtccacctttg 35813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 5732002 - 5731944
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||  |||||||    
T  5732002 aacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcaccttt 5731944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 25417274 - 25417217
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||| ||| |||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  25417274 cccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 18262700 - 18262644
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacct 246  Q
    ||||||||||| |||||||||||  |||||| || ||||||||||||||||||||||    
T  18262700 aacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacct 18262644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 30995137 - 30995205
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||| ||||||| ||||||||| |||||||||||||||| || |||||    
T  30995137 cccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttg 30995205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 38369719 - 38369783
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| ||||||||||||||||| ||||||||| ||| |||||||||  ||||||||||    
T  38369719 aggggaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttg 38369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 43399156 - 43399212
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||| |||| ||||    
T  43399156 aacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttg 43399212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 5079356 - 5079415
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| || ||||||||  |||||||| |||||||||||||||||||||||||    
T  5079356 aacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtcgcccacctttg 5079415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 13664285 - 13664344
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||| |||  ||||||||    
T  13664285 aacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttg 13664344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 15034096 - 15034159
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||||| ||||||| | |||||||||    
T  15034096 gggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagttgtccacctttg 15034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 28857144 - 28857194
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccgg 231  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||    
T  28857144 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 2485216 - 2485280
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| || |||| ||||||||| ||||||| ||||| |||||||||||| ||||||||    
T  2485216 aggggaacaaccctgggcctgtgcgcatgcctctacgtatgagtcggattagtcgctcacctttg 2485280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 6764540 - 6764488
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    |||||| | ||||| |||||||||| ||||||||| |||||||||||||||||    
T  6764540 aaacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcgcc 6764488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 18294571 - 18294507
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||| ||||||||||  |||||| ||||| |||||||| ||||||| |||||    
T  18294571 aggggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttg 18294507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 4016337 - 4016290
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||| ||||||||||||||||| |||||| || |||||||||||||    
T  4016337 aacaacacttggccagtgcgcatgcctctacacacgagccggattagt 4016290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 21149759 - 21149814
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| ||| |||||||||||| ||||||||| |||  ||||||||||||||||    
T  21149759 aacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccacc 21149814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 22295248 - 22295291
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  22295248 cttggccagtgcgcatgcctctacgcatgagttggattagtcgc 22295291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 26077166 - 26077225
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||||||| ||||| ||||| |||| || |||||    
T  26077166 aacaacgcttggccagtgcacatgcctctacgcacgagccagattaatcgctcatctttg 26077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 35245088 - 35245029
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||| |||||| |||||  |||||||||||||| ||||||| |||||||||||    
T  35245088 aacaacgtttgaccagtgtgcatgcttctacgcatgagcctgattagttgcccacctttg 35245029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 28857196 - 28857230
Alignment:
Q  215 ctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||| ||||||||    
T  28857196 ctctacgcatgagccggattagtcgctcacctttg 28857230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 39728409 - 39728471
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||| ||||||||||| ||||| ||||||||  ||| || ||||||||| ||||||||    
T  39728409 ggaaacaacacttggccagtgtgcatgcctctacgctcgagtcgaattagtcgctcacctttg 39728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 20228736 - 20228801
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| ||||||| |||||| ||| |||||| || ||| | ||||||||||||| |||||    
T  20228736 aagggaaacaatgcttggctagtgcgtatgcctctacacacgagtcagattagtcgcccatctttg 20228801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 30349612 - 30349661
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctt 247  Q
    |||||||||||||||| ||||| |||||||| | |||||||| |||||||    
T  30349612 ttggccagtgcgcatgcctctatgcatgagctgaattagtcgtccacctt 30349661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 35403594 - 35403561
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgca 223  Q
    ||||||||||||||| ||||||||||||||||||    
T  35403594 aacaacgcttggccaatgcgcatgtctctacgca 35403561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 21375368 - 21375435
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||  ||| ||||||||||||  |||||||||||| ||||||||||| ||| |||||    
T  21375368 cccaagggaa-caacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttg 21375435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 21487642 - 21487697
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||| ||||| |||||||||| ||||   || ||||||||||||||||||||||||    
T  21487642 aacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 25452945 - 25453001
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    |||| ||||| | ||| |||||| ||||| ||||||||| |||||||||||||||||    
T  25452945 aggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcgcc 25453001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 35006817 - 35006769
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||||||||||| ||||| ||||| ||||||||| ||||| ||||||||    
T  35006817 aacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 9633707 - 9633648
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9633707 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 9633648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 5253314 - 5253246
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  5253314 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttg 5253246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 2271385 - 2271326
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  2271385 aacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacctttg 2271326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12606458 - 12606517
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12606458 aacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 12606517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 21898676 - 21898734
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  21898676 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 21898734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 8888904 - 8888969
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||| |||||||||    
T  8888904 aagggaaacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttg 8888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 12635833 - 12635896
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||| ||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  12635833 cccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccac 12635896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 17114979 - 17114920
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||    
T  17114979 aacaacgcttggccaatggacatgcctctacgcatgagccggattagtcgcccacctttg 17114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 29444847 - 29444800
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  29444847 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagt 29444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 30788935 - 30788876
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  30788935 aacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttg 30788876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 14107440 - 14107387
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  14107440 aacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtcgccca 14107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 3588036 - 3587968
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||||| | |||||||    
T  3588036 cccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtcgtcaacctttg 3587968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 8932680 - 8932748
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| |||||| |||||||||| ||||||||||||||||||||| || ||||||||||    
T  8932680 cccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttg 8932748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 8944146 - 8944214
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| |||||| |||||||||| ||||||||||||||||||||| || ||||||||||    
T  8944146 cccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttg 8944214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 29333226 - 29333162
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||| || ||||| |||||||||    
T  29333226 aggggaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttg 29333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 3601112 - 3601171
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||||| |||||||||    
T  3601112 aacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttg 3601171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 8612056 - 8611997
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  8612056 aacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttg 8611997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 10311558 - 10311496
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| |||||||||||||||||||||||||||||||||| |||   |||||||||| ||||    
T  10311558 caaggggaacaacgcttggccagtgcgcatgtctctacgcacgagttagattagtcgctcacc 10311496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 13036086 - 13036032
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  13036086 aacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccac 13036032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 13391309 - 13391367
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||| ||||| | |||||||||||||||| ||||||||| |||||||||||||||||||    
T  13391309 aggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgccca 13391367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 9366502 - 9366454
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  9366502 aacgcttggccagtgcgcatgcctctacgcacgagccggattagacgcc 9366454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 19089517 - 19089585
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||    
T  19089517 cccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttg 19089585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 5029845 - 5029904
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| |||| ||||||||||| |||||||||||||  |||||||||||||| |||||    
T  5029845 aacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttg 5029904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 6606179 - 6606124
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| |||||||||||  |||| ||||||||||||||||||||||||| |||||    
T  6606179 aacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccacc 6606124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 34954701 - 34954642
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||||||||||| |||  ||||||||||||||| ||||||||| |||||||||    
T  34954701 aacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttg 34954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 10396496 - 10396554
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||| ||||||| ||||||||||||||| |||||| ||||||| |||||||||| ||||    
T  10396496 aggggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtcaccca 10396554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 5333032 - 5333081
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||| |||| ||||||||||||||||||| |||||||| |||||||||    
T  5333032 aacaacacttgtccagtgcgcatgtctctacacatgagccagattagtcg 5333081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 31129207 - 31129252
Alignment:
Q  192 caacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  31129207 caacgcttggctagtgcgcatgcctctacgcatgagccagattagt 31129252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 8938739 - 8938798
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||| |||||||||| |  ||||||||||||||| |||||||| |||||||||    
T  8938739 aacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttg 8938798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 13468961 - 13469016
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| |||| |||||| |||| ||||||||| ||||| |||||||||||||||    
T  13468961 aacaacgattggtcagtgcacatgcctctacgcacgagccagattagtcgcccacc 13469016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 14783494 - 14783447
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  14783494 ttggctagtgtgcatgcctctacgcatgagccggattagtcgtccacc 14783447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 11142628 - 11142678
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||||||| ||| |||||||||||| ||||||||||||| | |||||||    
T  11142628 ggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagattagt 11142678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 19230641 - 19230592
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||||| ||||  ||||| ||||||||| |||||||||||||||    
T  19230641 aacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 7300264 - 7300212
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||||||||| ||||| |||| |||| ||||||||| |||||| ||||    
T  7300264 aacgcttggccagtgtgcatgcctctgcgcacgagccggatgagtcgctcacc 7300212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 9179827 - 9179759
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| |||| |||||  ||||  |||||||||||||| |||||||||| |||||||||    
T  9179827 cccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtcgtccacctttg 9179759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 15643890 - 15643858
Alignment:
Q  216 tctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||| ||||||||||||||||||||    
T  15643890 tctacgcatgagtcggattagtcgcccaccttt 15643858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 21945311 - 21945359
Alignment:
Q  184 aagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccgga 232  Q
    ||||| ||||||||||||||||| || ||| ||||| ||||||||||||    
T  21945311 aaggggaacaacgcttggccagttcgtatgcctctatgcatgagccgga 21945359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 32157249 - 32157201
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||||| |||| |||||||||||  ||||||||||||||| ||||||||    
T  32157249 aacaacacttgaccagtgcgcatacctctacgcatgagccagattagtc 32157201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 43959913 - 43959846
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43959913 cccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 43959846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 33498920 - 33498863
Alignment:
Q  192 caacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33498920 caacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 33498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 10173054 - 10172995
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  10173054 aacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttg 10172995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10422813 - 10422872
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10422813 aacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 10422872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 37339846 - 37339904
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttg 37339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 49078130 - 49078188
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  49078130 cccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcg 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 17642096 - 17642028
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  17642096 cccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 17642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 10336541 - 10336600
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  10336541 aacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatcgtccacctttg 10336600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 14254351 - 14254292
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||    
T  14254351 aacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacctttg 14254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 33004102 - 33004043
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  33004102 gggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtcacccacc 33004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 5063926 - 5063868
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||    
T  5063926 acaacgcttggccagtgcgtatgtctctatgcacgagctggattagtcgcccacctttg 5063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 5855547 - 5855605
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||    
T  5855547 aacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcaccttt 5855605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 33418197 - 33418139
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||    
T  33418197 acaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttg 33418139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 8764007 - 8764071
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  8764007 cccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacc 8764071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 28324667 - 28324615
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  28324667 gggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16263570 - 16263629
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||| |||| ||||    
T  16263570 aacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttg 16263629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 17092564 - 17092501
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||| |||||||||    
T  17092564 gggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtcgtccacctttg 17092501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21849293 - 21849238
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    |||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  21849293 aggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgc 21849238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 26325837 - 26325892
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  26325837 aacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacc 26325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 30927810 - 30927751
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||||| |||| ||||    
T  30927810 aacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtcgtccacttttg 30927751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 32142929 - 32142870
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| ||||||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  32142929 aacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttg 32142870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 34697360 - 34697419
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||| |||| ||||| |||||||||||||||||||||||||||||| ||||    
T  34697360 aacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttg 34697419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 38791697 - 38791634
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| ||| |||||    
T  38791697 gggaaacaacgattggcaagtgcgcatgcctctacgcatgagccgaattagtcgtccatctttg 38791634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 45726508 - 45726457
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  45726508 ttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttg 45726457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 12744606 - 12744556
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  12744606 aacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgc 12744556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 12755596 - 12755546
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  12755596 aacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgc 12755546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 17988748 - 17988694
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||| |||||||||||||||||  |||||||||||| ||||||||||||    
T  17988748 agggaaacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcg 17988694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 45361965 - 45361907
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||  |||||||    
T  45361965 aacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcaccttt 45361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 44969689 - 44969738
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  44969689 aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcg 44969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 4581758 - 4581706
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| |||||||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttg 4581706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 5504055 - 5504115
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||   ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  5504055 aaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttg 5504115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 9659267 - 9659203
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| ||| | |||||||||| || |||||||||||||||||||||| |||||||||    
T  9659267 aggggaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttg 9659203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 11397977 - 11397913
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||| ||||||| |||| ||| ||||||||||||| ||||||||||| |||||||||    
T  11397977 aggggaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttg 11397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 18915883 - 18915947
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||| ||||| ||||||||| |||||||||||||||| ||||    
T  18915883 cccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcacc 18915947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 41663948 - 41663884
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||| ||||||||||| |||||||||||||| |||||||||| |||||    
T  41663948 cccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccacc 41663884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 48798153 - 48798105
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtc 238  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  48798153 aacaacgcttgactagtgcgcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 50503453 - 50503389
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| |||| |||||||||||| ||||||||| |||||||||| ||||||||||    
T  50503453 cccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccacc 50503389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 6563466 - 6563513
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  6563466 aacaacgcttggccagtgcacatgtctctacgcacgagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 10507723 - 10507778
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||||||| |||||    
T  10507723 aacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccacc 10507778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 12036827 - 12036768
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||||||||||||||| ||||||||| ||||| ||||| ||| |||||||||    
T  12036827 aacaatgcttggccagtgcgcatgcctctacgcacgagccagattaatcgtccacctttg 12036768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16956491 - 16956550
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||| |||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  16956491 aacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtcactcacctttg 16956550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 35908791 - 35908838
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  35908791 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacc 35908838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 46929821 - 46929762
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||| |||||||| ||| || |||||||||||||||||| |||| ||||    
T  46929821 aacaacgcttggccaatgcgcatgcctccacacatgagccggattagtcgtccacttttg 46929762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 50371917 - 50371858
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||| ||||||  ||||||||  |||||||||||||||||| |||||    
T  50371917 aacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttg 50371858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 18649435 - 18649377
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||| |||||||||||| ||||||| | ||||| ||||| ||||||||||||    
T  18649435 aacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccaccttt 18649377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 19195389 - 19195431
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccg 230  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  19195389 gaaacaacgtttggccagtgcgcatgcctctacgcatgagccg 19195431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 47312987 - 47312933
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||| ||||||| |||||||||||| ||| ||||||||||||||| |||||||||    
T  47312987 aggggaacaacgtttggccagtgcgtatgcctctacgcatgagccagattagtcg 47312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 32896 - 32945
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||||||||| |||||| |||| |||||||||||||||| ||||||||    
T  32896 aacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtcg 32945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 13265974 - 13266019
Alignment:
Q  201 gccagtgcgcatgtctctacgcatgagccggattagtcgcccacct 246  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  13265974 gccagtgcgcatgcctctacgcatgagccgggttagtcgtccacct 13266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 34719804 - 34719860
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| |||||||||||| ||||||||| ||| | |||||||||| ||||||||    
T  34719804 aacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtcgctcacctttg 34719860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 31576634 - 31576571
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||| ||||||||| ||||  || ||||||||||||||||| ||||||| ||| |||||    
T  31576634 gggaaacaatgcttggccaatgcgtgtgcctctacgcatgagccggcttagtcgtccatctttg 31576571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 32150997 - 32150946
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  32150997 ttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttg 32150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 42710225 - 42710166
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||  ||||||||||||||||| |||||||||| | ||| |||||||| |||||    
T  42710225 gggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtcgtccacc 42710166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 26660176 - 26660214
Alignment:
Q  203 cagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  26660176 cagtacgcatgcctctacgcatgagccggattagtcgcc 26660214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 892355 - 892326
Alignment:
Q  220 cgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||||||||||||    
T  892355 cgcatgagccggattagtcgcccacctttg 892326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 2981014 - 2980965
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    |||||| ||||||||||| ||||| ||||||||| ||| |||||||||||    
T  2981014 aacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtcg 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 6899597 - 6899642
Alignment:
Q  204 agtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||| || ||||||  ||||||||||||||||||||||||    
T  6899597 agtgcgcatgcctttacgcacaagccggattagtcgcccacctttg 6899642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 26258721 - 26258778
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    ||||||||||| |||||| |||| || |||||||||| ||||||| ||| ||||||||    
T  26258721 acaacgcttggtcagtgcacatgcctttacgcatgagtcggattaatcgtccaccttt 26258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 1764253 - 1764221
Alignment:
Q  217 ctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||||||||||||    
T  1764253 ctacgcatgaggcggattagtcgcccacctttg 1764221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 2567300 - 2567360
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||||||||| |||||| || ||| | |||||| || ||| |||||    
T  2567300 aaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttg 2567360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 12150760 - 12150812
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    ||||||||||||| |||| |  ||||| ||||||||| |||||||||||||||    
T  12150760 ggaaacaacgcttagccaatatgcatgcctctacgcacgagccggattagtcg 12150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 42744803 - 42744843
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccg 230  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  42744803 aacaacgcttggccagtgagcatgcctctacgcacgagccg 42744843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 6873 - 6941
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  6873 cccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttg 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 155802 - 155734
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  155802 cccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 155734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 25866 - 25808
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||||| |||||||||    
T  25866 aacaacgcttggccagtgcgcatgactctacgcgtgaaccagattagtcacccaccttt 25808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 4479383 - 4479319
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  4479383 aggggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttg 4479319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 6042840 - 6042904
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  6042840 cccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccacc 6042904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 43032920 - 43032988
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||    
T  43032920 cccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttg 43032988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 583840 - 583899
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  583840 aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttg 583899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 10927634 - 10927692
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  10927634 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccttt 10927692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 15884643 - 15884579
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  15884643 aggggaacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 15884579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 8141126 - 8141189
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||| |||| ||||    
T  8141126 gggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttg 8141189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 18374038 - 18374097
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  18374038 aacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttg 18374097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 2467200 - 2467146
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2467200 aacaactcttggccagtgcgcatgtctctatgcatgagccggattagtcgtccac 2467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 6100500 - 6100558
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||    
T  6100500 aacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcaccttt 6100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 45521191 - 45521255
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||||| ||||  ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  45521191 aggggaacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttg 45521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 2964104 - 2964163
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||| || ||||| ||||||||| || ||||||||||||||||||||||    
T  2964104 aacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttg 2964163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 14666162 - 14666099
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||| |||||||||| ||||||||||||||||| |||||||||  |||| ||||||||||||||    
T  14666162 cccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgcccac 14666099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 22958798 - 22958857
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  22958798 aacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacctttg 22958857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 26570952 - 26571011
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| | |||  |||||||||||||||||||||||| |||||||||    
T  26570952 aacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttg 26571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 33401881 - 33401823
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| |||| |||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  33401881 aacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 8587030 - 8586978
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggat 233  Q
    |||| ||| |||||||||||||||||||||||  |||||||||||||||||||    
T  8587030 cccagggggaacaacgcttggccagtgcgcatacctctacgcatgagccggat 8586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 10535491 - 10535427
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| |||| |||||| |||||||||||||||| |||||||||||| ||||||||  ||||||||    
T  10535491 aggggaacaccgcttgaccagtgcgcatgtctccacgcatgagccgaattagtcgttcacctttg 10535427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 33935817 - 33935761
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacct 246  Q
    |||||| ||||||||||||||||| || |||||||||| |||||||||||| |||||    
T  33935817 aacaacacttggccagtgcgcatgcctatacgcatgagtcggattagtcgctcacct 33935761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 21174168 - 21174215
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  21174168 aacaacgcttggtcagtgcgcatggctctacgcatcagccggattagt 21174215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 43027333 - 43027392
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| |||||    
T  43027333 aacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttg 43027392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 3418595 - 3418537
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| |||||||||||||||||  |||||||||||| | ||||||||| ||||||||    
T  3418595 aacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccaccttt 3418537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 18091427 - 18091485
Alignment:
Q  189 aaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctt 247  Q
    |||||||| ||| |||||||||||| ||||||||| ||| || ||||||||||||||||    
T  18091427 aaacaacgtttgaccagtgcgcatgcctctacgcacgaggcgaattagtcgcccacctt 18091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 25848211 - 25848265
Alignment:
Q  197 cttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttgct 251  Q
    ||||| |||||| |||||||||||||||||| |||| |||||| |||||||||||    
T  25848211 cttggtcagtgcacatgtctctacgcatgagtcggactagtcgtccacctttgct 25848265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 35496340 - 35496278
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||| ||||| ||||||||||| ||||||| | |||| |||||| |||||||||||||    
T  35496340 ggaaacaacacttggtcagtgcgcatgcctctacgtacgagctggattaatcgcccacctttg 35496278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 24938646 - 24938585
Alignment:
Q  188 gaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| ||||| || |||||||| |||||||||||| |||||||||||  |||||||||    
T  24938646 gaaacaacacttggtcaatgcgcatgcctctacgcatgaaccggattagtcatccacctttg 24938585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 9860086 - 9860022
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||| ||| |||||| ||||||||||| ||||| |||||| |||||||| ||||||||| |||||    
T  9860086 cccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccacc 9860022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 16893968 - 16894023
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||| | |||| || ||||||||||||||||| ||||||||||||||    
T  16893968 aacgcttggccagtacacatgcctttacgcatgagccggatt-gtcgcccacctttg 16894023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 1013068 - 1013001
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||| ||| ||||||||||||||||| | |||| |||||||||||||||| |||| |||  |||||||    
T  1013068 cccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaattaatcgttcaccttt 1013001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 16291285 - 16291226
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||||||| | |||| ||||| |||||||| ||||||||||| ||||||||    
T  16291285 aacaacacttggccagtacacatgcctctatgcatgagctggattagtcgctcacctttg 16291226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 23895596 - 23895655
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||  ||||||||| |||  |||||| ||| |||||||||    
T  23895596 aacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttg 23895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 24837270 - 24837329
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||||||||||  |||| ||||| ||| |||| |||||||||| |||||||||    
T  24837270 aacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtcgtccacctttg 24837329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 28333068 - 28333115
Alignment:
Q  193 aacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgc 240  Q
    |||||||| |||||||||||||||||||| |||||| | |||||||||    
T  28333068 aacgcttgaccagtgcgcatgtctctacgtatgagctgaattagtcgc 28333115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 44893360 - 44893305
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    ||||| |||||||||||| ||||| ||||||||| ||||||||||| |||| ||||    
T  44893360 aacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatcgctcacc 44893305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 27975919 - 27975977
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| ||||  ||||| ||||| |||||||| |||||||||||| ||||||||||||    
T  27975919 aacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccaccttt 27975977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 28033188 - 28033246
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccaccttt 248  Q
    |||||| ||||  ||||| ||||| |||||||| |||||||||||| ||||||||||||    
T  28033188 aacaacacttgatcagtgtgcatgcctctacgcttgagccggattaatcgcccaccttt 28033246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 14846598 - 14846662
Alignment:
Q  185 agggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||||| | |||| ||||||||||| ||||||||||||| | ||| ||||| |||||||||    
T  14846598 aggggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttg 14846662  T

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Target: scaffold0209 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12600 - 12659
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  12600 aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttg 12659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 9872 - 9931
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  9872 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 9931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 8792 - 8724
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  8792 cccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttg 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 7926 - 7858
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||| || ||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  7926 cccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacctttg 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 95066 - 95008
Alignment:
Q  187 ggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||    
T  95066 ggaaacaacgtttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccacc 95008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 12697 - 12756
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  12697 aacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttg 12756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 16902 - 16965
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||| ||||||||    
T  16902 gggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttg 16965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 42914 - 42855
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42914 aacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttg 42855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 271165 - 271103
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgccca 243  Q
    |||| ||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  271165 cccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtcgccca 271103  T

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Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 250099 - 250048
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| ||||||||| |||||||||||||||| | ||||||    
T  250099 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttg 250048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 219404 - 219455
Alignment:
Q  198 ttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||| ||||||||| || | |||||||||| |||||||||    
T  219404 ttggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttg 219455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 1696 - 1637
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    ||||||| || ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  1696 aacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttg 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 319449 - 319508
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||  ||||| |||||||| |||||||||| |||||||||    
T  319449 aacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttg 319508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 26210 - 26264
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccac 244  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||    
T  26210 aacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccac 26264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 41064 - 41130
Alignment:
Q  183 caagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||| |||||| ||||| ||||| ||||| ||||||||| ||||||||||||||||||| |||||    
T  41064 caaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttg 41130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 68535 - 68600
Alignment:
Q  181 cccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||| ||| ||||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||    
T  68535 cccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttg 68600  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 18659 - 18706
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagt 237  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  18659 aacaacgcttggccagtgcacatgtctctacgcacgagccagattagt 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 72651 - 72710
Alignment:
Q  182 ccaagggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcc 241  Q
    ||||||| ||||||||||| |||||||||||| ||| | |||| ||||||||||||||||    
T  72651 ccaaggggaacaacgcttgaccagtgcgcatgcctcaaagcataagccggattagtcgcc 72710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 6000 - 6054
Alignment:
Q  191 acaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||||||||||||||| |||| ||||||||||||| || |||||||| |||||    
T  6000 acaacgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccacc 6054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 51758 - 51813
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacctttg 249  Q
    |||||||||||||||||||||||||||    ||| ||||||||| |||||||||||||||    
T  51758 aacaacgcttggccagtgcgcatgtct----gcacgagccggatcagtcgcccacctttg 51813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 19282 - 19331
Alignment:
Q  190 aacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcg 239  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  19282 aacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcg 19331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 17413 - 17472
Alignment:
Q  186 gggaaacaacgcttggccagtgcgcatgtctctacgcatgagccggattagtcgcccacc 245  Q
    |||||| || ||||| ||||||||||||  ||||| || |||||||||||||||||||||    
T  17413 gggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccacc 17472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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