View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21188_low_4 (Length: 264)
Name: NF21188_low_4
Description: NF21188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21188_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 15908860 - 15909091
Alignment:
| Q |
25 |
tgactaacttaataacaattgtaaactgtttgttaactgatttaactaactaactaacaaatctaataatgtctgatacattacatttacttggtctaaa |
124 |
Q |
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| T |
15908860 |
tgactaacttaataacaattgtaaactgtttcttaactgatttaactaactaactaacaaatctaataatgtctgttacattacatttactaggtctaaa |
15908959 |
T |
|
| Q |
125 |
atttaaagtcttatgatctcctacacttcaatctgattgaagtcgtgtctggtgtttgagactgacatgacatcgacatatgttgctacattcaattgtc |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15908960 |
atttaaagtcttatgatctcctacacttcaatctgattgaagtcgtgtctggtgtttgagactgacatgacatcgacatatgttgctacattcaattgtc |
15909059 |
T |
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| Q |
225 |
gaagtgtcaatgtctagttcagtgtctgtgct |
256 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
15909060 |
gaagtgtcaatgtctagttcagtgtctgtgct |
15909091 |
T |
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