View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2118_low_11 (Length: 360)
Name: NF2118_low_11
Description: NF2118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2118_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 49 - 342
Target Start/End: Original strand, 40749538 - 40749831
Alignment:
| Q |
49 |
agtatcaaaaaatttaggtgactttggtttcaaagaccaaagtcatgcaaatttaaacattcaattccttcatactgattttttataaataaagaagttt |
148 |
Q |
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| T |
40749538 |
agtataaaaaaatttaggtgactttggtttcaaagaccaaagtcatgcaaatttaaacattcaattccttcatactgattttttataaataaagaagttt |
40749637 |
T |
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| Q |
149 |
ctgaaaatttattgtttttgatgtggatgaaaaaactgtttttcttttcaattacttctcatttgcattatgtatgaatttaatgcatacttcctcataa |
248 |
Q |
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| T |
40749638 |
ctgaaaatttcttgtttttgatgtggatgaaaaaactgtttttcttttcaattacttctcatttgcattatgtatgaatttaatgcatacttcctcataa |
40749737 |
T |
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| Q |
249 |
tttaattattcacaaattaagacaatgatctagtactactgcatagtgtaaatgattaggtttctaatggtacattttatttcacaggaaggat |
342 |
Q |
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| T |
40749738 |
tttaattattcacaaattaagacaatgatctagtactactgcatagtgtaaatgattaggtttctaatggtacattttatttcacaggaaggat |
40749831 |
T |
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