View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2118_low_22 (Length: 212)
Name: NF2118_low_22
Description: NF2118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2118_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 6229992 - 6229809
Alignment:
| Q |
18 |
aatgcttgataagcacttcagaatattttccgaaatcacatttggacagtcagcttctgttgacatttggcgtggactaggttgtcttaattctgcaatt |
117 |
Q |
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| T |
6229992 |
aatgcttgataagcacttcagaatattttccgaaatcacatttggacagtcagcttctgttgacatttggtgtggactaggttgtcttaattctgcaatt |
6229893 |
T |
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| Q |
118 |
ttctgttcttttacccttggttgttgctgcacagtgggaaatatcacaattcacaatcattaactacaaggaatttcttctcac |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
6229892 |
ttctgttcttttacccttggttgttgctgcacagtgggaaatatcacaattcacaatcattaactacaaggaatttcttttcac |
6229809 |
T |
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