View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21190_low_4 (Length: 297)
Name: NF21190_low_4
Description: NF21190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21190_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 3064966 - 3065245
Alignment:
| Q |
1 |
tcgtagcagacaccgtcccaacaactccagcaacgacaaaataaggcctccgacgatatcccaatatcggaaaagcatcggttagaattccccagatagg |
100 |
Q |
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| T |
3064966 |
tcgtagcagacaccgtcccaacaactccagcaacgacaaaataaggcctccgacgatatcccaatatcggaaaagcatcggttagaattccccagatagg |
3065065 |
T |
|
| Q |
101 |
ttttagaatccatggtatgaagtatattcctacgtagagttgaactgttgaaggttggagtttttgaacgtctttccaatagtaatcagtgactagtttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3065066 |
ttttagaatccatggtatgaagtatattcctacgtagagttgaactgttgaaggttggagtttttgaacgtctttccaatagtaatcagtgactagtttg |
3065165 |
T |
|
| Q |
201 |
aagagtgagcctgtgaaaccttggcctataccatatactaggaatattcctgctatgaatgttgggtttaggttgtttgt |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3065166 |
aagagtgagcctgtgaaaccttggcctataccatatactaggaatattcctgctatgaatgttgggtttaggttgtttgt |
3065245 |
T |
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