View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21191_low_10 (Length: 293)
Name: NF21191_low_10
Description: NF21191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21191_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 15 - 286
Target Start/End: Original strand, 40690320 - 40690591
Alignment:
| Q |
15 |
atgatgatcaacaaacaaatttgtcttgatcatcaacattcaaatctagaaatatatttgttgtaagatattatattcttttgattcattatcaacttga |
114 |
Q |
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| T |
40690320 |
atgatgatcaacaaacaaatttgtcttgatcatcaacattcaaatctagaaatatatttgttgtaagatattatattcttttgattcattatcaacttga |
40690419 |
T |
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| Q |
115 |
acaagcacctgataatttttacaaaattcagttgtttattgaagaannnnnnnnaatttggtctatgaaaaggtctacacaacaactcatgtatagctca |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||| |
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| T |
40690420 |
acaagcacctgataatttttacaaaattcagttgtttattgaagaatttttttaattttgttctatgaaaaggcctacacaacaactcatgtatagctca |
40690519 |
T |
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| Q |
215 |
tgttgtgaatctttttcatattaattttttctatttgctctttttattctgtgccaaagaatgtgatgatgt |
286 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
40690520 |
tgttgtgtatctttttcatattaattttttctatttgctcttttttttctgtgccaaagaatgtgatgatgt |
40690591 |
T |
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