View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21192_high_6 (Length: 250)
Name: NF21192_high_6
Description: NF21192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21192_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 37054686 - 37054450
Alignment:
| Q |
1 |
tcttcgtttggacatgtatcagtactaattgcttcttaacatgttattaaacatttttaaatttatgatgtataccaggggaaaaatgatcctttccgta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054686 |
tcttcgtttggacatgtatcagtactaattgcttcttaacatgttattaaacatttttaaatttatgatgtataccaggggaaaaatgatcctttccgta |
37054587 |
T |
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| Q |
101 |
attcaaagctctcacggagatctgcatcacttgttagattccgtgaaaaacggaaagagagatgttttgagaagaaaatccgctacacttgccgtaagga |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054586 |
attcaaaggtctcacggagatctgcatcacttgttaggtttcgtgaaaaacggaaagagagatgttttgagaagaaaatccgctacacttgccgtaagga |
37054487 |
T |
|
| Q |
201 |
ggttgctgagaggtagagtcctgggttgttgggatct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
37054486 |
ggttgctgagaggtagagtcctgggttgttgggatct |
37054450 |
T |
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