View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21193_high_3 (Length: 752)

Name: NF21193_high_3
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21193_high_3
NF21193_high_3
[»] chr1 (33 HSPs)
chr1 (16-736)||(18792911-18793629)
chr1 (250-447)||(40419514-40419711)
chr1 (250-510)||(26016312-26016572)
chr1 (305-501)||(43423647-43423845)
chr1 (286-444)||(9509229-9509387)
chr1 (283-444)||(1210653-1210814)
chr1 (283-444)||(9592642-9592803)
chr1 (283-444)||(30202343-30202504)
chr1 (232-381)||(52442780-52442929)
chr1 (300-444)||(34792562-34792706)
chr1 (305-443)||(8671850-8671986)
chr1 (694-752)||(18792791-18792849)
chr1 (283-444)||(49347606-49347767)
chr1 (300-444)||(51440978-51441122)
chr1 (142-184)||(26016232-26016274)
chr1 (300-444)||(696194-696338)
chr1 (300-444)||(32082958-32083102)
chr1 (300-444)||(32231167-32231311)
chr1 (283-370)||(43240668-43240755)
chr1 (351-441)||(38868858-38868948)
chr1 (250-418)||(9599633-9599801)
chr1 (300-444)||(15085859-15086003)
chr1 (305-440)||(17815405-17815537)
chr1 (142-182)||(28528348-28528388)
chr1 (367-446)||(52073673-52073753)
chr1 (365-496)||(40416361-40416492)
chr1 (319-478)||(51812469-51812628)
chr1 (390-444)||(10272274-10272328)
chr1 (365-447)||(23791854-23791936)
chr1 (306-444)||(27848018-27848155)
chr1 (298-335)||(6641055-6641092)
chr1 (306-343)||(17275137-17275174)
chr1 (359-444)||(39140504-39140589)
[»] chr6 (8 HSPs)
chr6 (277-444)||(33083960-33084127)
chr6 (283-444)||(28085284-28085445)
chr6 (305-401)||(9568590-9568688)
chr6 (278-376)||(33998285-33998383)
chr6 (300-480)||(9593883-9594069)
chr6 (300-418)||(9706701-9706819)
chr6 (250-335)||(6056092-6056177)
chr6 (307-444)||(30031188-30031325)
[»] chr5 (32 HSPs)
chr5 (252-504)||(31636073-31636319)
chr5 (142-418)||(3096943-3097216)
chr5 (283-444)||(24178418-24178579)
chr5 (350-499)||(42199263-42199410)
chr5 (283-443)||(1275173-1275332)
chr5 (300-444)||(10082952-10083095)
chr5 (300-403)||(32516483-32516584)
chr5 (350-444)||(33667193-33667285)
chr5 (161-501)||(1525428-1525770)
chr5 (306-410)||(11729022-11729126)
chr5 (306-381)||(28186944-28187019)
chr5 (283-444)||(2075687-2075848)
chr5 (305-370)||(5305546-5305611)
chr5 (300-432)||(11002648-11002778)
chr5 (360-480)||(15489669-15489789)
chr5 (300-444)||(16347591-16347735)
chr5 (281-444)||(36123405-36123574)
chr5 (305-444)||(4496312-4496453)
chr5 (275-369)||(6368213-6368307)
chr5 (264-370)||(16134466-16134572)
chr5 (252-325)||(14748957-14749030)
chr5 (327-402)||(418242-418315)
chr5 (283-343)||(1287903-1287963)
chr5 (144-184)||(21952119-21952159)
chr5 (390-498)||(43475255-43475363)
chr5 (224-363)||(38578809-38578947)
chr5 (358-444)||(14749290-14749376)
chr5 (250-442)||(21952226-21952424)
chr5 (367-444)||(2712936-2713013)
chr5 (300-337)||(27998348-27998385)
chr5 (143-184)||(32516291-32516332)
chr5 (390-443)||(37065544-37065597)
[»] chr8 (24 HSPs)
chr8 (142-363)||(38328101-38328322)
chr8 (250-439)||(39953482-39953671)
chr8 (307-501)||(32043522-32043716)
chr8 (316-501)||(25985462-25985644)
chr8 (324-442)||(9695580-9695698)
chr8 (283-441)||(36565457-36565615)
chr8 (300-444)||(36395162-36395307)
chr8 (283-444)||(39946765-39946926)
chr8 (250-403)||(13171903-13172056)
chr8 (300-417)||(30456452-30456568)
chr8 (142-202)||(10824543-10824603)
chr8 (283-444)||(36545055-36545218)
chr8 (295-501)||(10080063-10080267)
chr8 (350-501)||(25985756-25985910)
chr8 (280-443)||(40813227-40813392)
chr8 (283-440)||(2796463-2796622)
chr8 (293-377)||(39051060-39051144)
chr8 (350-502)||(5908617-5908773)
chr8 (300-343)||(12492156-12492199)
chr8 (149-184)||(16351163-16351198)
chr8 (373-444)||(45419235-45419306)
chr8 (300-370)||(30748384-30748454)
chr8 (456-501)||(7531800-7531845)
chr8 (252-345)||(43732444-43732537)
[»] chr4 (48 HSPs)
chr4 (142-414)||(10775665-10775937)
chr4 (277-444)||(17900382-17900549)
chr4 (283-444)||(436137-436298)
chr4 (280-470)||(54470112-54470302)
chr4 (283-444)||(31960027-31960188)
chr4 (300-444)||(33227134-33227278)
chr4 (300-444)||(48174306-48174450)
chr4 (314-480)||(10208977-10209139)
chr4 (283-444)||(53707702-53707863)
chr4 (264-380)||(18499762-18499878)
chr4 (300-443)||(33709844-33709992)
chr4 (283-418)||(12494658-12494793)
chr4 (305-444)||(41192764-41192905)
chr4 (250-443)||(31458903-31459098)
chr4 (305-444)||(52569728-52569867)
chr4 (307-444)||(25257794-25257929)
chr4 (277-425)||(30807496-30807640)
chr4 (340-501)||(31897584-31897743)
chr4 (339-501)||(46371988-46372150)
chr4 (283-444)||(48622756-48622915)
chr4 (283-444)||(33191061-33191222)
chr4 (306-443)||(37797783-37797920)
chr4 (300-445)||(47265414-47265559)
chr4 (339-415)||(6478910-6478986)
chr4 (300-444)||(27450392-27450530)
chr4 (190-370)||(27991702-27991882)
chr4 (300-444)||(56375215-56375359)
chr4 (365-444)||(35555860-35555939)
chr4 (317-447)||(51252671-51252799)
chr4 (146-184)||(15183630-15183668)
chr4 (251-417)||(45423497-45423657)
chr4 (368-441)||(2588984-2589056)
chr4 (305-370)||(25967554-25967619)
chr4 (142-182)||(30807362-30807402)
chr4 (339-419)||(36557267-36557347)
chr4 (306-447)||(44360014-44360158)
chr4 (300-343)||(1777329-1777372)
chr4 (390-501)||(42285857-42285967)
chr4 (250-416)||(45205088-45205255)
chr4 (250-444)||(50471403-50471595)
chr4 (298-447)||(41009559-41009709)
chr4 (307-380)||(934712-934785)
chr4 (300-365)||(18966478-18966543)
chr4 (300-397)||(35690229-35690326)
chr4 (147-184)||(42037638-42037675)
chr4 (276-381)||(42037766-42037871)
chr4 (386-447)||(46715582-46715643)
chr4 (283-372)||(50286879-50286968)
[»] chr2 (22 HSPs)
chr2 (287-416)||(4598803-4598934)
chr2 (283-444)||(36183359-36183520)
chr2 (306-500)||(23714418-23714609)
chr2 (306-500)||(24102090-24102281)
chr2 (283-444)||(3865980-3866141)
chr2 (283-444)||(8180688-8180849)
chr2 (305-475)||(9578885-9579053)
chr2 (142-418)||(7292755-7293029)
chr2 (300-444)||(38429809-38429953)
chr2 (300-490)||(42092444-42092632)
chr2 (250-444)||(41763255-41763448)
chr2 (305-445)||(9556581-9556720)
chr2 (350-497)||(37481777-37481924)
chr2 (372-495)||(18958904-18959031)
chr2 (327-444)||(40759051-40759169)
chr2 (280-336)||(7825263-7825319)
chr2 (300-416)||(38434876-38434992)
chr2 (360-444)||(43752160-43752244)
chr2 (300-444)||(45367838-45367981)
chr2 (390-501)||(44437877-44437988)
chr2 (300-354)||(45077673-45077727)
chr2 (350-447)||(13240955-13241052)
[»] chr7 (28 HSPs)
chr7 (260-440)||(36514424-36514602)
chr7 (234-497)||(5335781-5336042)
chr7 (300-501)||(19262590-19262788)
chr7 (300-501)||(39811882-39812083)
chr7 (300-444)||(34869345-34869489)
chr7 (298-418)||(48736138-48736258)
chr7 (300-444)||(33072879-33073021)
chr7 (283-444)||(49029184-49029345)
chr7 (300-444)||(13859221-13859365)
chr7 (300-501)||(43282330-43282533)
chr7 (283-444)||(33350019-33350180)
chr7 (283-444)||(35906414-35906575)
chr7 (300-444)||(37617869-37618014)
chr7 (300-501)||(47848599-47848800)
chr7 (300-444)||(39906583-39906727)
chr7 (283-444)||(12841488-12841649)
chr7 (283-444)||(31005131-31005292)
chr7 (305-485)||(28020894-28021074)
chr7 (300-444)||(38606930-38607073)
chr7 (300-444)||(14593686-14593834)
chr7 (305-444)||(44855385-44855524)
chr7 (300-444)||(45836693-45836837)
chr7 (283-444)||(36651902-36652061)
chr7 (283-444)||(11593868-11594029)
chr7 (306-370)||(27021993-27022057)
chr7 (332-450)||(40830183-40830298)
chr7 (305-445)||(46356068-46356208)
chr7 (300-444)||(43281601-43281743)
[»] chr3 (28 HSPs)
chr3 (283-444)||(52138708-52138869)
chr3 (250-401)||(344967-345118)
chr3 (300-403)||(2340968-2341071)
chr3 (283-441)||(28245345-28245503)
chr3 (307-444)||(36820174-36820309)
chr3 (339-444)||(3987011-3987116)
chr3 (391-508)||(11581460-11581577)
chr3 (283-444)||(54128286-54128447)
chr3 (300-444)||(54278945-54279089)
chr3 (300-480)||(19736921-19737102)
chr3 (300-444)||(21998-22141)
chr3 (391-495)||(39235154-39235258)
chr3 (250-370)||(46567991-46568111)
chr3 (300-444)||(47233809-47233953)
chr3 (300-443)||(51447924-51448066)
chr3 (386-480)||(29374945-29375039)
chr3 (390-447)||(21200563-21200620)
chr3 (281-444)||(25191285-25191446)
chr3 (392-444)||(31453151-31453203)
chr3 (350-414)||(38186905-38186969)
chr3 (372-444)||(50960846-50960918)
chr3 (302-480)||(19757826-19758005)
chr3 (283-370)||(33272315-33272402)
chr3 (350-444)||(39600894-39600988)
chr3 (383-501)||(37351415-37351533)
chr3 (365-480)||(45289268-45289385)
chr3 (314-444)||(49503767-49503897)
chr3 (350-503)||(31454381-31454532)
[»] scaffold0018 (1 HSPs)
scaffold0018 (305-444)||(31398-31537)
[»] scaffold0157 (1 HSPs)
scaffold0157 (305-418)||(25684-25797)
[»] scaffold0036 (1 HSPs)
scaffold0036 (300-444)||(4484-4629)
[»] scaffold0024 (1 HSPs)
scaffold0024 (300-443)||(82646-82789)


Alignment Details
Target: chr1 (Bit Score: 653; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 653; E-Value: 0
Query Start/End: Original strand, 16 - 736
Target Start/End: Complemental strand, 18793629 - 18792911
Alignment:
Q  16 aatatgttgtggaaggattcgaactttgattcagtacgttcataacttagatgtaaaagctgaaaattatatcataccaaaaattacatagtttaaaaga 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18793629 aatatgttgtggaaggattcgaactttgattcattacgttcataacttagatgtaaaagctgaaaattatatcataccaaaaattacatagtttaaaagg 18793530  T
Q  116 agatgtagacctgcgaataagttggatgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18793529 agatgtagacctgcgaataagttggatgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtacaagttaagttgaatggagaattttatcaa 18793430  T
Q  216 acaacagcaagacctacagtgttgtacgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgtt 315  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18793429 acaacagcaagacctacagtgttgtatgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgtt 18793330  T
Q  316 ggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagact 415  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18793329 ggatgtgtggaaagactagacaggatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtagaaactagact 18793230  T
Q  416 tagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagagatatgagtatactt 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18793229 tagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaactcagatcactagagatatgggtatactt 18793130  T
Q  516 agagtagattaaagactagcaattttataactaatggaaaaaataagtggtgtgtgtagggttcgaatcttgacccctgtatatataatttaatgcccta 615  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  18793129 -gagtagattaaagactagcaattttataactaatggaaaaaataagtggtgtgtgtagggttcgaattttga-ccctgtatatataatttaatgcccta 18793032  T
Q  616 aaactaagttttttcaactaagttaagctgtcgaggagaaattaaagactattttatctggttacaaatatattgtaattttaatatttcaaacattaaa 715  Q
    ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18793031 aaattaagttttttcaactaagttaagttctcgaggagaaattaaagactattttatctggttacagatatattgtaattttaatatttcaaacattaaa 18792932  T
Q  716 atacaagatgattacatagag 736  Q
    |||||||||||||||||||||    
T  18792931 atacaagatgattacatagag 18792911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 250 - 447
Target Start/End: Original strand, 40419514 - 40419711
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||| ||||||||||||  || ||||||||||||| ||| || | |||| |||| ||||||| |||| ||| || ||||||   ||||||| ||     
T  40419514 agtgttgggtggtaaagaaccaacacgaacataaagtaagtgtagcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattag 40419613  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    ||||||| |||||| |||||| |||||||||| |||||| |||||| ||||||||  |||||||||||  || ||| |||||| ||||||||||||||    
T  40419614 aaatgacaacattagagagagagttggggtagaacttatagtagaatagatggtagtaactagacttaagtggtttgggcatgtagagagaagacatg 40419711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 250 - 510
Target Start/End: Original strand, 26016312 - 26016572
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||||||||||||||||  |  ||||||||||||||||| || | |||| ||||||||||||||||||||| ||||||||||| |||| || ||     
T  26016312 agtgttgggcggtaaagaaccaacaagaacataaagtaagcgtagcagagatgaggatgttgcgttggatgtgtggtaagactagacaggatataattat 26016411  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac--atg 447  Q
    |||| | | ||||| |||||| |||||||||  || |||   ||||||||||||| |||||||| |||| || ||| || ||| ||| |||||||  |||    
T  26016412 aaataatggcattagagagagagttggggtaacacctatatgagaaaagatggtagaaactagatttaggtggtttgggtatgtagaaagaagacctatg 26016511  T
Q  448 caattttggtagtaagaagagtagattagatggcgggaagtcagatcactagagatatgagta 510  Q
    ||  ||  |||| ||| ||| ||||| |||||  ||| |||||||||||||||| || |||||    
T  26016512 ca--ttctgtagcaaggagattagatcagatgaaggggagtcagatcactagaggtaagagta 26016572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 305 - 501
Target Start/End: Original strand, 43423647 - 43423845
Alignment:
Q  305 gatgttgcgttggatgtgtgga--aagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatgg 402  Q
    |||||||||||||||||||||   ||||||||||| ||||| | || ||||||| |||||| |||||| |||||||||  || ||| |||||||||||||    
T  43423647 gatgttgcgttggatgtgtgggggaagactagacaggataggattagaaatgaccacattagagagagagttggggtaacacctatagtagaaaagatgg 43423746  T
Q  403 taaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    |  ||||||| ||||| || ||| | |||| ||||||||||| || |  ||  |||||||| |||||||| |||||||   | ||||| ||||||||||    
T  43423747 tggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagtaagtagagtagactagatggatagtagtcaaatcactagag 43423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 286 - 444
Target Start/End: Original strand, 9509229 - 9509387
Alignment:
Q  286 taagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggact 385  Q
    |||||||| || | |||| ||||||| |||||||| |||  ||||||||||| ||||  | || |||||||  ||||| |||||| |||||||||| ||     
T  9509229 taagcgtagcagagatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccattagagagagagttggggtagcacc 9509328  T
Q  386 tattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||| ||||||||||||||||||| ||| ||||| |  ||| |||||| |||||||||||    
T  9509329 tatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagac 9509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 1210653 - 1210814
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || |||||||     
T  1210653 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagc 1210752  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  1210753 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 1210814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 9592642 - 9592803
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  9592642 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 9592741  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| | ||| ||| ||| ||||| ||  || |||||| |||||||||||    
T  9592742 acctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagac 9592803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 30202504 - 30202343
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  30202504 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 30202405  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||| | ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  30202404 acctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagac 30202343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 232 - 381
Target Start/End: Complemental strand, 52442929 - 52442780
Alignment:
Q  232 cagtgttgtacgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagac 331  Q
    |||||||||||| || |||||||| || ||||| ||| ||  ||||| ||||| |||||||| || | |||| ||||||| ||||||||||||| |||||    
T  52442929 cagtgttgtacgggacatagtgtttggtggtaatgaaacaacacaaaaataaattaagcgtagcagacatgaggatgttgtgttggatgtgtggtaagac 52442830  T
Q  332 tagacatgatagaactaaaaatgacgacattaaagagagggttggggtag 381  Q
    |||||| ||||  | || ||||||  |||||  |||||| ||||||||||    
T  52442829 tagacaagataagattagaaatgagaacattggagagagagttggggtag 52442780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 34792706 - 34792562
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||| | ||  |||||   ||||| |||||| || ||||||| || ||| |||||||||     
T  34792706 atgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgaaaccattagagagagagtgggggtagcacctatagtagaaaagt 34792607  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  34792606 tggtagaaagtaggcttagatggtttgggcatgtagagagaagac 34792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 443
Target Start/End: Original strand, 8671850 - 8671986
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||  |||||| || ||||||| || ||| ||||||||| |||||    
T  8671850 gatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt--agagagagtgggggtagcacctatagtagaaaagttggta 8671947  T
Q  405 aaaactagacttagttgattttggcatgcagagagaaga 443  Q
     ||| ||| ||||| || ||| |||||| ||||||||||    
T  8671948 gaaaataggcttagatggtttgggcatgtagagagaaga 8671986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 694 - 752
Target Start/End: Complemental strand, 18792849 - 18792791
Alignment:
Q  694 ttttaatatttcaaacattaaaatacaagatgattacatagaggatgcaatgtattgat 752  Q
    ||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  18792849 ttttaatttttcaaacattaaaatataggatgcttacatagaggatgcaatgtattgat 18792791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 49347767 - 49347606
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||  |||||| || |||||||     
T  49347767 aagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattggagagagagtaggggtagc 49347668  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |  ||| ||||||||| ||||| ||| ||| ||||| || ||| | ||||||||||||||||    
T  49347667 atctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgcagagagaagac 49347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 51441122 - 51440978
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||| ||||| | |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || ||||||  || ||| |||||||||     
T  51441122 atgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtaacacctatagtagaaaagt 51441023  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  51441022 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 51440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 26016232 - 26016274
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  26016232 tgaaatggaggagtgtctcaggtgttttatgtgatgctaaagt 26016274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 696194 - 696338
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  696194 atgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 696293  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| ||  || | |||| |||||||||||    
T  696294 tggtagaaaataggcttagatggcttggacatgtagagagaagac 696338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 32083102 - 32082958
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||| | ||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  32083102 atgaggatgttgcgctggatgagtggtaagactagacagggtaggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 32083003  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | ||||||||||| ||||    
T  32083002 tggtagaaaataggcttagatggtttggacatgcagagaggagac 32082958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 32231311 - 32231167
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| | |||| |||| |||| |||||||||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| ||||||||      
T  32231311 atgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaaat 32231212  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  32231211 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 32231167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 43240755 - 43240668
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||| ||||| ||||||    
T  43240755 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacgccattagagagag 43240668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 351 - 441
Target Start/End: Original strand, 38868858 - 38868948
Alignment:
Q  351 aatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaa 441  Q
    |||||| ||||||||||||||||||| |||| || |||  |||||||||||||  ||||| | ||||| || ||| |||||| ||||||||    
T  38868858 aatgacaacattaaagagagggttggagtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaa 38868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 418
Target Start/End: Complemental strand, 9599801 - 9599633
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||| |||||  |||||||  ||||  || ||||||||||| || | |||| ||||||| |||||||| |||| ||||||||||  ||||  | ||     
T  9599801 agtgttgtgcggttgagaaccaacacaataatcaagtaagcgtagcagagatgaggatgttgtgttggatgagtggtaagactagacgggatatgattag 9599702  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttag 418  Q
     ||||||  ||||| |||||| ||||| |||  || ||| ||||||||||||||| ||| ||| |||||    
T  9599701 gaatgacatcattagagagagagttggagtaacacctatagtagaaaagatggtagaaaataggcttag 9599633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 15085859 - 15086003
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||| | |||| ||||||||| | ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  15085859 atgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 15085958  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  15085959 tggtagaaaataggcttagatggtttggacatgtagagagaagac 15086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 440
Target Start/End: Original strand, 17815405 - 17815537
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||| ||||||||||||| | ||||||||  ||||| | || ||||||| | |||| ||||||   || ||||||||||||  | |||||||||||     
T  17815405 gatgttgtgttggatgtgtggta-gactagacgggatagcattagaaatgacaatattagagagaga--tgaggtaggacttataatggaaaagatggtg 17815501  T
Q  405 aaaactagacttagttgattttggcatgcagagaga 440  Q
     ||||||| |||||||| ||| |||||| |||||||    
T  17815502 gaaactaggcttagttggtttgggcatgtagagaga 17815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 28528348 - 28528388
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaa 182  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  28528348 tgaaattgaggagtgcctcaggtgttttatgtgatgcgaaa 28528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 367 - 446
Target Start/End: Complemental strand, 52073753 - 52073673
Alignment:
Q  367 agagggttggggtaggacttattgtagaaaagatggta-aaaactagacttagttgattttggcatgcagagagaagacat 446  Q
    |||| |||||||||| || ||||||||||||||||||| |||||| | ||||| || ||| | |||| |||||||||||||    
T  52073753 agagagttggggtagcacctattgtagaaaagatggtaaaaaactcggcttaggtggtttggacatgtagagagaagacat 52073673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 496
Target Start/End: Original strand, 40416361 - 40416492
Alignment:
Q  365 agagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaaga 464  Q
    |||||| ||||| |||| || ||| ||||||||||||||  |||| || ||||| || ||| |||||| ||||||||||  || |  ||| ||||||||     
T  40416361 agagagagttggagtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaagg 40416460  T
Q  465 agagtagattagatggcgggaagtcagatcac 496  Q
    ||||||||| |||||  ||  |||||||||||    
T  40416461 agagtagatcagatgcaggatagtcagatcac 40416492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 478
Target Start/End: Original strand, 51812469 - 51812628
Alignment:
Q  319 tgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttag 418  Q
    ||||||| |||| |||||| ||||  | || ||||||| || ||| |||||| |||||||||  |  ||| ||||||||||||||  ||||||| ||||     
T  51812469 tgtgtggtaagattagacacgataagattagaaatgactactttagagagagagttggggtaacaactatagtagaaaagatggtggaaactaggcttat 51812568  T
Q  419 ttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagat 478  Q
     |||||| |||||| |||||||| |  || |  ||| |||||||||| ||||||| ||||    
T  51812569 gtgatttgggcatgtagagagaaaaattgtagattttgtagtaagaaaagtagatcagat 51812628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 10272274 - 10272328
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||||||||||||| |||||||||| |  || |||||||||| |||||||||||    
T  10272274 gtagaaaagatggtagaaactagactaaagtggttttggcatgtagagagaagac 10272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 365 - 447
Target Start/End: Complemental strand, 23791936 - 23791854
Alignment:
Q  365 agagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    |||||| | |||||||||||  || ||||||||||||||| | |||| |||||| || |||  ||||| ||||||||||||||    
T  23791936 agagagagatggggtaggacccatggtagaaaagatggtagatactaaacttaggtggtttgtgcatgtagagagaagacatg 23791854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 306 - 444
Target Start/End: Complemental strand, 27848155 - 27848018
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaa 405  Q
    |||||| |||||||| |||| ||||||||||  ||||| | ||  ||| ||  ||||| |||||| |||| ||||| || | | |||||||||||||||     
T  27848155 atgttgtgttggatgagtggtaagactagacgggatagga-taggaataacaccattagagagagagttgtggtagcacctgtggtagaaaagatggtag 27848057  T
Q  406 aaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||| ||  ||||| || ||| ||||||||||||||||||    
T  27848056 aaaataagcttaggtggtttgggcatgcagagagaagac 27848018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 6641055 - 6641092
Alignment:
Q  298 aaatgatgatgttgcgttggatgtgtggaaagactaga 335  Q
    |||||||||||||||||||||||||||| | |||||||    
T  6641055 aaatgatgatgttgcgttggatgtgtggtatgactaga 6641092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 17275137 - 17275174
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatag 343  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  17275137 atgttgcgttggatgtgtggtaagactacacatgatag 17275174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 39140504 - 39140589
Alignment:
Q  359 cattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| |||||| ||||| |||| || ||| ||||||||||||| ||||| | | ||||| || ||| |||||| |||||||||||    
T  39140504 cattacagagagagttggcgtagcacctatagtagaaaagatggcaaaaaattggcttaggtggtttgggcatgtagagagaagac 39140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 33083960 - 33084127
Alignment:
Q  277 aacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttgg 376  Q
    ||||||||||||||||| || |||||| |||| |||||||||||||||| |||||||||   ||||||| || ||||||||| |||| |||||| |||||    
T  33083960 aacataaagtaagcgtagcagaaatgaggatgctgcgttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagttgg 33084059  T
Q  377 ggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| || ||| ||||||||||||||| ||||||||||||| || ||| || ||| |||||||||||    
T  33084060 ggtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 33084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 28085284 - 28085445
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  28085284 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccattagagagagagtgggggtagc 28085383  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  28085384 acctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagac 28085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 9568590 - 9568688
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagag--agggttggggtaggacttattgtagaaaagatg 401  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||| || |  || |||| ||||| |||||| ||||||||||||    
T  9568590 gatgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaacattagagcgccagtgttgaggtagcacttatagtagaaaagatg 9568688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 278 - 376
Target Start/End: Complemental strand, 33998383 - 33998285
Alignment:
Q  278 acataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttgg 376  Q
    ||||||| |||||||| || | |||| ||||||||||||||||||||| |||||||||  |||||| | || ||||||| |||||| |||||| |||||    
T  33998383 acataaattaagcgtagcagagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattagagagagagttgg 33998285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 480
Target Start/End: Complemental strand, 9594069 - 9593883
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagaggg------ttggggtaggacttattgtag 393  Q
    |||| |||||||||||||||| |||| ||||||||||  ||||| | ||  ||||||  ||||| |||||| |      ||||||||| ||   | ||||    
T  9594069 atgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattagagagagagagggagttggggtagcaccattagtag 9593970  T
Q  394 aaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 480  Q
    ||||||||||| ||| ||| ||||| || ||| |||||| |||||||||||||| |  |   |||||||||||||||||| ||||||    
T  9593969 aaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatgg 9593883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 418
Target Start/End: Original strand, 9706701 - 9706819
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||  |||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || | ||||| || |||||||||||||     
T  9706701 atgaggatgttgcactggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggaggtagcacctattgtagaaaagt 9706800  T
Q  400 tggtaaaaactagacttag 418  Q
    ||||| ||| ||| |||||    
T  9706801 tggtagaaaataggcttag 9706819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 6056177 - 6056092
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactaga 335  Q
    ||||||||| ||| ||||||||  || || || |||||||||||  | |||||  |||||||||||||||| |||| |||||||||    
T  6056177 agtgttgggtggttaagaaccaacacgaaaatcaagtaagcgtagtagaaatgcggatgttgcgttggatgagtggtaagactaga 6056092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 30031188 - 30031325
Alignment:
Q  307 tgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaa 406  Q
    ||||| |||||||| |||| ||||||||||  ||||| | || ||||| |  ||||| |||| | || ||||||| || ||| ||||||||| ||||| |    
T  30031188 tgttgtgttggatgagtggtaagactagacgggataggattagaaatgtcaccattagagagggagtgggggtagcacctatagtagaaaagttggtaga 30031287  T
Q  407 aactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||| ||| || | |||| |||||||||||    
T  30031288 aaataggcttagatgagttggacatgtagagagaagac 30031325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 6e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 252 - 504
Target Start/End: Complemental strand, 31636319 - 31636073
Alignment:
Q  252 tgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaa 351  Q
    ||||||||||||||||||||  ||||| ||||| || ||||| || | |||||||||||    ||||| ||||| ||||||||||  ||||||| || ||    
T  31636319 tgttgggcggtaaagaaccaacacaaaaataaattatgcgtagcagagatgatgatgtt----tggatttgtggtaagactagactggatagaattataa 31636224  T
Q  352 atgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaat 451  Q
    |||||  ||||| ||| ||  ||||||||| || ||| ||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||  |        
T  31636223 atgacagcattagagaaag--ttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtgga 31636126  T
Q  452 tttggtagtaagaagagtagattagatggcgggaagtcagatcactagagata 504  Q
    | | |||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  31636125 tgttgtagtaaggagagtagattagatggtggggagtcaaatcactagagata 31636073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 142 - 418
Target Start/End: Original strand, 3096943 - 3097216
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgta 241  Q
    ||||||||| ||| | || ||||||||||||||||| |||| | |   |||||||||| ||| | ||||||| |||||| | |||||| ||  |||||||    
T  3096943 tgaaatggatgagagccttaggtgttttatgtgatgtgaaaataccgcttaagttgaa-ggaaatttttatcgaacaacggtaagaccgacgatgttgta 3097041  T
Q  242 cgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgat 341  Q
    || || | | |||||| ||||||| |||||  || ||||| ||||||| || ||| | | || |||||| ||||||||||||   || ||||||   |||    
T  3097042 cgggacaaaatgttggacggtaaataaccaacacgaacattaagtaagtgtgacagagacgaggatgttacgttggatgtgttataaaactagatgagat 3097141  T
Q  342 agaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttag 418  Q
    | || ||||||||||||||||| |||||  |||||||||  || |||  ||||||||||| || |||||||||||||    
T  3097142 aaaattaaaaatgacgacattatagaga--gttggggtaacacctatattagaaaagatgctagaaactagacttag 3097216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 24178418 - 24178579
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||| ||||||||| | ||| ||||||  ||||| |||||| || |||||||     
T  24178418 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccattagagagagagtgggggtagc 24178517  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| ||||||  ||||||||||    
T  24178518 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagac 24178579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 499
Target Start/End: Original strand, 42199263 - 42199410
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgca 449  Q
    |||||||||| ||| ||||||  ||||||||| |||||  ||||||||||||||  ||||||||||||| || ||| |||||| |||||||||||||| |    
T  42199263 aaatgacgacgttacagagagaattggggtagcactta--gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgta 42199360  T
Q  450 attttggtagtaagaagagtagattagatggcgggaagtcagatcactag 499  Q
      ||  |||||||| ||||||||| | |||| | | ||||| ||||||||    
T  42199361 gattctgtagtaaggagagtagatcacatggagagtagtcaaatcactag 42199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 443
Target Start/End: Original strand, 1275173 - 1275332
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    |||||||| || || | |||| |||||||||||||||| |||| ||||||||||||| ||| | ||  ||||||  ||||| |||||| | ||||||||     
T  1275173 aagtaagcatagcagagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattagagagagag-tggggtagc 1275271  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| ||||||||||    
T  1275272 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 1275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 10083095 - 10082952
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||| ||| |||||||| ||||||||||  ||||||| || ||||||  ||||||  |||||  ||||||||  || ||| ||||||||||    
T  10083095 atgaggatgttgctttg-atgtgtggtaagactagacgggatagaattagaaatgagaacattagggagagcattggggtatcacctatagtagaaaaga 10082997  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||||||||||||  || ||| |||||| |||||||||||    
T  10082996 tggtagaaactagacttaagtggtttcggcatgtagagagaagac 10082952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 403
Target Start/End: Original strand, 32516483 - 32516584
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||  || ||||||| |||||  |||||| ||||| |||  |||||| ||||||||||    
T  32516483 atgatgatgttgtgttggatgtgtggtaagactagacaggatagacttagaaatgacaacatt--agagagagttggagtaacacttatagtagaaaaga 32516580  T
Q  400 tggt 403  Q
    ||||    
T  32516581 tggt 32516584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 444
Target Start/End: Original strand, 33667193 - 33667285
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||||| ||||||| |||||  ||||||||| || ||| ||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||    
T  33667193 aaatgacaacattaacgagag--ttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagac 33667285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 161 - 501
Target Start/End: Original strand, 1525428 - 1525770
Alignment:
Q  161 aggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgtacgagatatagtgttgggcg 260  Q
    |||||||||||||||||| ||||| |   |||||||||| ||| | ||||||| |||||| | ||||||  |  ||||||| | || |  ||||||||||    
T  1525428 aggtgttttatgtgatgcaaaagtaccgcttaagttgaagggaaatttttatcgaacaacggtaagaccggcgatgttgtatgggaca--gtgttgggcg 1525525  T
Q  261 gtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgaca 360  Q
    || ||||||||  |  |||||||| ||||| |  |  |||||| |||||| ||| |||||||||| |||||| ||   |||| || || |||||||||||    
T  1525526 gtgaagaaccaacatgaacataaaataagctttgctgaaatgaggatgttacgtcggatgtgtggtaagactcga---gataaaattagaaatgacgaca 1525622  T
Q  361 ttaaagagagggttgggg-------taggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattt 453  Q
    ||| |||||| ||||||        ||  || ||||||||||||||||||| ||||||||||||| ||  || | |||| |||||||||||  |  | ||    
T  1525623 ttagagagagagttgggaattgggataccacctattgtagaaaagatggtagaaactagacttaggtggcttggacatgtagagagaagacccgtgaatt 1525722  T
Q  454 tggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
      | ||| || ||||||||| |||||| ||  ||||||||||||||||    
T  1525723 ctgcagttaggagagtagatcagatggaggagagtcagatcactagag 1525770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 11729022 - 11729126
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaa 405  Q
    |||||||||| ||||| ||  ||||||||||||||||||| || ||||||  | |||||| | || ||||||| |  ||||||||||||||||||||||     
T  11729022 atgttgcgttagatgtatgataagactagacatgatagaattataaatgattatattaaaaatagagttggggcaacacttattgtagaaaagatggtag 11729121  T
Q  406 aaact 410  Q
    |||||    
T  11729122 aaact 11729126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 28187019 - 28186944
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtag 381  Q
    ||||||| |||||||||||| ||||||||||||| ||| | || ||||||| |||||| ||||| |||||||||||    
T  28187019 atgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacattagagagaaggttggggtag 28186944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 2075848 - 2075687
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| || | ||||||||||| ||||| | ||  |||||| |||||| |||||| || ||||||      
T  2075848 aagtaagtgtagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattagagagagagtgggggtaac 2075749  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||  ||||||||| ||||| | | ||| ||||| || ||| |||||| |||||||||||    
T  2075748 acctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagac 2075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 5305546 - 5305611
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    ||||||||||||||||||||| ||||||||||| ||||||| || |||| || |||||| ||||||    
T  5305546 gatgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagagag 5305611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 432
Target Start/End: Complemental strand, 11002778 - 11002648
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| ||||||||||| ||||| |||   ||||||| || ||||||| |||||  |||||| ||| |||||| || ||  |||||||| |    
T  11002778 atgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacatt--agagagagttcgggtagcacctacagtagaaaaca 11002681  T
Q  400 tggtaaaaactagacttagttgattttggcatg 432  Q
    ||||| ||||||||||||| || ||| ||||||    
T  11002680 tggtagaaactagacttaggtggtttgggcatg 11002648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 480
Target Start/End: Complemental strand, 15489789 - 15489669
Alignment:
Q  360 attaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtag 459  Q
    |||| |||||| |||||||||| || ||||||||||||||||||  |||||   ||||| || ||| |||||| ||||||||||  || |  ||| |||     
T  15489789 attagagagagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtat 15489690  T
Q  460 taagaagagtagattagatgg 480  Q
    |||| ||||||||||||||||    
T  15489689 taaggagagtagattagatgg 15489669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 16347735 - 16347591
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| |||||||||||  |||  | |||||||||   ||||| |||||| |  ||||||| || ||| |||||||||     
T  16347735 atgaggatgttgcgttggatgagtggtaagactagacaatatatgattaaaaatgaaaccattagagagagagcgggggtagcacctatagtagaaaagt 16347636  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  16347635 tggtagaaaataggcttagatggtttggacatgtagagagaagac 16347591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 281 - 444
Target Start/End: Complemental strand, 36123574 - 36123405
Alignment:
Q  281 taaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagag--agggttgggg 378  Q
    |||| |||||||| || | |||| ||||||| ||||||||||| | || |||| ||||||| ||| |||||||||| | |||| ||||  || |||||||    
T  36123574 taaaataagcgtagcagagatgaagatgttgtgttggatgtgttgtaaaactaaacatgatggaattaaaaatgacaatattagagagtgagagttgggg 36123475  T
Q  379 taggact-----tattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||  ||      |||||||||||| |||||| ||||| ||||||| |||||| |||||| |||||||||||    
T  36123474 taacaccacacctattgtagaaaa-atggtagaaactcgacttaggtgatttgggcatgtagagagaagac 36123405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 305 - 444
Target Start/End: Original strand, 4496312 - 4496453
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacat--gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatgg 402  Q
    |||||||||||||||| |||| |||||||||||   ||||| | ||  ||||||  | ||| |||||| || ||||||| || ||| ||||||||| |||    
T  4496312 gatgttgcgttggatgagtggtaagactagacacaggataggattaggaatgacacctttagagagagagtgggggtagcacctatagtagaaaagctgg 4496411  T
Q  403 taaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||| ||||| || ||| |||||| |||||||||||    
T  4496412 tagaaaataggcttagatggtttgggcatgtagagagaagac 4496453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 369
Target Start/End: Complemental strand, 6368307 - 6368213
Alignment:
Q  275 caaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagaga 369  Q
    |||||||| | ||||| |||| | ||||| ||||||||||| ||||||||| |||| |||||  ||||||| || ||||||| ||||| ||||||    
T  6368307 caaacatagaataagcataacttgaatgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaacattgaagaga 6368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 16134572 - 16134466
Alignment:
Q  264 aagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatta 363  Q
    ||||||||  ||||||||| ||||||  || ||||||||| ||||||| ||||||||| ||| |||||||||   |||| || || |||||||||||| |    
T  16134572 aagaaccaacacaaacatatagtaagtatagcataaatgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaatgacgacatga 16134473  T
Q  364 aagagag 370  Q
     ||||||    
T  16134472 gagagag 16134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 14748957 - 14749030
Alignment:
Q  252 tgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtgg 325  Q
    ||||||||| ||||||||||  ||||||||||  |||||| |||| | |||| |||||||| ||||||||||||    
T  14748957 tgttgggcgttaaagaaccaacacaaacataagttaagcgcaacagagatgaggatgttgcattggatgtgtgg 14749030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 418315 - 418242
Alignment:
Q  327 aagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatgg 402  Q
    ||||| ||||||||||||| || ||||||| |||||  |||||| |||||||||| || ||| |||||||||||||    
T  418315 aagacgagacatgatagaattagaaatgacaacatt--agagagagttggggtagcacctatggtagaaaagatgg 418242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 1287963 - 1287903
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatag 343  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| |||||||||||||||||    
T  1287963 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgatag 1287903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 21952119 - 21952159
Alignment:
Q  144 aaatggaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  21952119 aaatggaggagtgcctcatgtgttttatgtgatgcgaaagt 21952159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 498
Target Start/End: Original strand, 43475255 - 43475363
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtc 489  Q
    ||||||||||||||  ||||||| ||||| || ||| || || |||||||||||| || |  | | |||||||| ||||||||| |||||| ||  ||||    
T  43475255 gtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagatggaggatagtc 43475354  T
Q  490 agatcacta 498  Q
    |||||||||    
T  43475355 agatcacta 43475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 363
Target Start/End: Complemental strand, 38578947 - 38578809
Alignment:
Q  224 aagacctacagtgttgtacgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgt 323  Q
    |||||| ||| ||||||||||   | ||||||||| ||| ||||||||  ||||||||||| |||| ||| || |||||| | |||| | | ||||||||    
T  38578947 aagaccgacaatgttgtacgacgcaaagtgttgggtggtgaagaaccaacacaaacataaaataagtgtagcagaaatgaggttgtt-cctaggatgtgt 38578849  T
Q  324 ggaaagactagacatgatagaactaaaaatgacgacatta 363  Q
    || |||||||||   |||| || ||||||| |||||||||    
T  38578848 ggcaagactagatgagataaaattaaaaattacgacatta 38578809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 14749290 - 14749376
Alignment:
Q  358 acattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |||||| |||||| ||||| |||| || ||| ||||||||  ||||| ||||||||||||| || ||| | |||| |||||||||||    
T  14749290 acattagagagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagagaagac 14749376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 21952226 - 21952424
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||||| | ||||||||  || ||| |||| |||| |||  | | |||| |||||||||||| |||||||| ||||||||||  ||||  | ||     
T  21952226 agtgttgggcgcttaagaaccaacacgaacttaaattaagtgtagaaaagatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattag 21952325  T
Q  350 aaatgacgacattaa--agagagggttggggta----ggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaag 442  Q
    |||||||  ||||||  ||||||||||||||||      || ||| ||||||||||||| | |||||||||| || || ||| | |||| |||||||||    
T  21952326 aaatgacagcattaaagagagagggttggggtaacacacacctatagtagaaaagatggcagaaactagactcaggtggtttggacatgtagagagaag 21952424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 444
Target Start/End: Original strand, 2712936 - 2713013
Alignment:
Q  367 agagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |||| |||||||||| || ||| ||  ||||||||||| | ||||||||||| || ||| |||||| |||||||||||    
T  2712936 agagagttggggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagac 2713013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 27998348 - 27998385
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagaca 337  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  27998348 atgaggatgttgcgttggatgtgtggtaagactagaca 27998385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 32516332 - 32516291
Alignment:
Q  143 gaaatggaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    ||||||||| |||| ||||||||||||||||||||| |||||    
T  32516332 gaaatggagaagtgcctcaggtgttttatgtgatgcaaaagt 32516291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 37065544 - 37065597
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    ||||||||||||||| ||||||||||| | | |||| |||||| ||||||||||    
T  37065544 gtagaaaagatggtagaaactagacttgggtcatttgggcatgtagagagaaga 37065597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 4e-31; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 142 - 363
Target Start/End: Complemental strand, 38328322 - 38328101
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgta 241  Q
    ||||||| |||||||||| ||||||||||||||||  |||| | |   |||||||||| ||| || |||||| |||||||| |||||| ||| || ||||    
T  38328322 tgaaatgaaggagtgtcttaggtgttttatgtgatatgaaaataccgtttaagttgaagggaaaaatttatcgaacaacagtaagaccaacaatggtgta 38328223  T
Q  242 cgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgat 341  Q
    ||||||| || ||||||| |||||||||||  |||||||||||||||| |||    | |||| |||||| |||||||||| |||  |||||| | | |||    
T  38328222 cgagatagagagttgggcagtaaagaaccaacacaaacataaagtaagtgtagtggagatgacgatgttacgttggatgtatggtgagactaaagaggat 38328123  T
Q  342 agaactaaaaatgacgacatta 363  Q
    |||| || ||||||||||||||    
T  38328122 agaattagaaatgacgacatta 38328101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 439
Target Start/End: Complemental strand, 39953671 - 39953482
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||| ||||||||||||||  || |||||||||| |||||| || | ||||  |||||||||||||||||||| |||| || |||||||| || ||     
T  39953671 agtgttgagcggtaaagaaccaacacgaacataaagttagcgtagcagagatgagaatgttgcgttggatgtgtggtaagattaaacatgatataattag 39953572  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagag 439  Q
    |||| | ||||||| |||||| |||||| ||| || |||   ||||||||||||| |||||||| |||| || ||| |||||| ||||||    
T  39953571 aaataatgacattagagagagagttgggatagcacctatatgagaaaagatggtagaaactagatttaggtggtttaggcatgtagagag 39953482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 501
Target Start/End: Original strand, 32043522 - 32043716
Alignment:
Q  307 tgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaa 406  Q
    ||||||||||||||||||| ||||||||||  ||||||| || ||||||| |||||| |||||| |||||||||  || ||| ||| ||||||||||| |    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagttggggtatcacctatagtacaaaagatggtaga 32043621  T
Q  407 aactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    |||||||||| | || ||| | |||| ||||||||||| ||    | | |||||||| ||| ||||| |||||| |||  |||| ||||||||||    
T  32043622 aactagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggaggggtgtcaaatcactagag 32043716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 316 - 501
Target Start/End: Original strand, 25985462 - 25985644
Alignment:
Q  316 ggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagact 415  Q
    |||||||||| ||||| ||||| ||||||| || ||| ||| |||||| ||||||  ||||||||| || ||| ||||||||||||||| ||||||||||    
T  25985462 ggatgtgtggtaagacaagacaggatagaattagaaacgacaacattagagagag--ttggggtagcacctatagtagaaaagatggtagaaactagact 25985559  T
Q  416 tagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    |   |||||||||||||  |||||||||||||  | ||| | |||||| ||| ||||| |||||  ||| ||||| ||||||||||    
T  25985560 tgcgtgattttggcatg-tgagagaagacatgtgaattttgaagtaaggagactagatcagatgtaggggagtcaaatcactagag 25985644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 324 - 442
Target Start/End: Original strand, 9695580 - 9695698
Alignment:
Q  324 ggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgat 423  Q
    |||||||||||||| ||||||| || ||||||| |||||| |||||   ||||||||| || ||| ||||||||||||||  ||||| | ||||| || |    
T  9695580 ggaaagactagacaggatagaattagaaatgacaacattatagagatatttggggtagcacctatagtagaaaagatggtggaaactcggcttaggtggt 9695679  T
Q  424 tttggcatgcagagagaag 442  Q
    || |||||| |||||||||    
T  9695680 ttgggcatgtagagagaag 9695698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 283 - 441
Target Start/End: Complemental strand, 36565615 - 36565457
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||| ||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || |||||||     
T  36565615 aagtaagtgtagcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagc 36565516  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaa 441  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| ||||||||    
T  36565515 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 36565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 36395307 - 36395162
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  36395307 atgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 36395208  T
Q  400 tggtaaaaactagac-ttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| | |||| || ||| |||||| |||||||||||    
T  36395207 tggtagaaaataggctttagatggtttgggcatgtagagagaagac 36395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 39946765 - 39946926
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| ||| || || |||||||     
T  39946765 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccattatagaaagagtgggggtagc 39946864  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| | |||| ||| |||||||    
T  39946865 acctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagac 39946926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 250 - 403
Target Start/End: Complemental strand, 13172056 - 13171903
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||||||| ||||||||  | ||| ||||| |||||  | || | ||||  ||||||| |||||||||| | ||||||||||  ||||| | ||     
T  13172056 agtgttgggcggttaagaaccaacataaaaataaattaagcacatcagagatgagaatgttgcattggatgtgtagtaagactagacgggataggattag 13171957  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggt 403  Q
    ||||||| | |||| |||||| ||||||| || || ||| ||||||||||||||    
T  13171956 aaatgacaagattagagagagagttggggaagcacctatagtagaaaagatggt 13171903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 417
Target Start/End: Complemental strand, 30456568 - 30456452
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||||||||||||||| ||||| | |   ||||||| || |||||||||||||| |||||  ||| | || | || ||| ||||||||||    
T  30456568 atgaggatgttgcgttggatgtgtggtaagacca-atgggatagaattagaaatgacgacattagagagatagttcgagttgcacctatagtagaaaaga 30456470  T
Q  400 tggtaaaaactagactta 417  Q
    ||||| ||||||||||||    
T  30456469 tggtagaaactagactta 30456452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 10824603 - 10824543
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatgg 202  Q
    |||||||||| || ||||||||||||||||||||| ||||| | | |||||||||||||||    
T  10824603 tgaaatggagaagagtctcaggtgttttatgtgatacgaaaataccagttaagttgaatgg 10824543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 36545055 - 36545218
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatt--aaagagagggttggggta 380  Q
    ||||||| ||| || | |||| ||||||| |||||||| |||| ||||||||||||||||| | ||  ||||||  ||||  | |||||| || ||||||    
T  36545055 aagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagagtgggggta 36545154  T
Q  381 ggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
      || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  36545155 acacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 36545218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 501
Target Start/End: Complemental strand, 10080267 - 10080063
Alignment:
Q  295 cataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtaga 394  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||  ||||  | || ||||||| |||||| |||||| |||| ||||| |  ||  |||||    
T  10080267 catagatgatgatgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcatcta-agtaga 10080169  T
Q  395 aaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatc 494  Q
    |||||||||  ||||||| | | | || ||| |||||| ||||||||||| ||    ||| |||||||| ||||||||| | |||  ||| ||||| |||    
T  10080168 aaagatggtggaaactaggcct-gatggtttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggggagtcaaatc 10080070  T
Q  495 actagag 501  Q
    |||||||    
T  10080069 actagag 10080063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 350 - 501
Target Start/End: Complemental strand, 25985910 - 25985756
Alignment:
Q  350 aaatgacgacattaaagagag----ggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagaca 445  Q
    |||||||||||||| ||||||     |||||||||| || ||| ||||||||| | ||| |||||||||||| ||| |||  ||||  |||||||||||     
T  25985910 aaatgacgacattagagagagagattgttggggtagcacctatagtagaaaagtttgtagaaactagactta-ttggtttgtgcatttagagagaagacc 25985812  T
Q  446 tgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    ||  | ||| |||||||| ||||||||| ||||||  || ||||||||| ||||||    
T  25985811 tgtgaattttgtagtaaggagagtagatcagatggaagggagtcagatcgctagag 25985756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 443
Target Start/End: Original strand, 40813227 - 40813392
Alignment:
Q  280 ataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatt--aaagagagggttggg 377  Q
    |||||||||| ||| || | || | ||||||| |||||||| |||| |||||||||||| |||| | ||| ||||||  ||||  | |||||| || |||    
T  40813227 ataaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagactagacataataggattaagaatgacaccattagagagagagagtgggg 40813326  T
Q  378 gtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    |||| || ||| ||||||||| ||||| ||| |||  |||| || ||| |||||| ||||||||||    
T  40813327 gtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaaga 40813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 2796463 - 2796622
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagacta--gacatgatagaactaaaaatgacgacattaaagagagggttggggta 380  Q
    ||||||| ||| || | |||| ||||||||| |||||| |||| |||||||  |||||||||| | ||  ||||||  ||||| |||||| || ||||||    
T  2796463 aagtaagtgtagcaaagatgaggatgttgcgctggatgagtggtaagactatagacatgataggattaggaatgacaccattagagagagagtgggggta 2796562  T
Q  381 ggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagaga 440  Q
    |  | ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||    
T  2796563 gcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 2796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 39051060 - 39051144
Alignment:
Q  293 aacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggg 377  Q
    |||||| |||| ||||||| ||| ||||||||| ||||| ||||||||||||| || ||||||| | |||  |||||| ||||||    
T  39051060 aacatagatgaggatgttgtgttagatgtgtggtaagacaagacatgatagaattagaaatgacaatattcgagagagagttggg 39051144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 502
Target Start/End: Original strand, 5908617 - 5908773
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggt--aa----aaactagacttagttgattttggcatgcagagagaaga 443  Q
    ||||||| |||||| |||||| |||||||||| || ||| ||||||||||||||  ||    |||||||||||||||| |||  | ||  ||||||||||    
T  5908617 aaatgacaacattagagagagagttggggtagaacctatagtagaaaagatggttgaaatggaaactagacttagttggttt--ggatatagagagaaga 5908714  T
Q  444 catgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagaga 502  Q
    | || |  ||| |||||||| ||||||||| || ||| ||   ||||||||||||||||    
T  5908715 cctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagaga 5908773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 12492199 - 12492156
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatag 343  Q
    |||| |||||||||||||||| |||| |||||||||||||||||    
T  12492199 atgaggatgttgcgttggatgagtggtaagactagacatgatag 12492156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 16351163 - 16351198
Alignment:
Q  149 gaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16351163 gaggagtgtctcaggtgttttatgtgatgtgaaagt 16351198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 45419235 - 45419306
Alignment:
Q  373 ttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||||||| || ||| ||||||||||||||| ||| ||||||||| || ||| |||||| ||||| |||||    
T  45419235 ttggggtagcacctatagtagaaaagatggtataaaatagacttaggtggtttgggcatgtagagataagac 45419306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 30748384 - 30748454
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    |||| |||||| ||||||||||||||  ||| |||||||||||| | || ||||||| |||||| ||||||    
T  30748384 atgaggatgtttcgttggatgtgtggttagattagacatgataggattagaaatgacaacattacagagag 30748454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 7531845 - 7531800
Alignment:
Q  456 gtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||||||    
T  7531845 gtagtaaggagagtagatcagatggaggggagtcagatcactagag 7531800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 43732444 - 43732537
Alignment:
Q  252 tgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaa 345  Q
    |||||| |||| ||||||||  ||||  ||||  || ||||| || |||||| |||||| |||||||||||||| |||||||||  ||||||||    
T  43732444 tgttggacggtgaagaaccaacacaagaataagatatgcgtagcagaaatgaggatgttacgttggatgtgtggtaagactagatgtgatagaa 43732537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 414
Target Start/End: Complemental strand, 10775937 - 10775665
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgta 241  Q
    ||||||||||||||| || |  ||||||||||||||||||||  |   | |||||||| ||| ||||||||   ||||| | |||||| |   |||||||    
T  10775937 tgaaatggaggagtgccttacttgttttatgtgatgcgaaagcacccctcaagttgaagggaaaattttattggacaacggtaagaccaatgatgttgta 10775838  T
Q  242 cgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgat 341  Q
     | || | |||||||||||||||||||| |   |||| ||||| |||||||| || | |||||||||||| |||||||| |||| | ||| ||||| ||     
T  10775837 tgggaaagagtgttgggcggtaaagaactaatgcaaaaataaattaagcgtagcagagatgatgatgttgtgttggatgcgtggcaggaccagacaggaa 10775738  T
Q  342 agaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagac 414  Q
    |||| || ||||||| |||||| |||||| |||||||||  || ||| ||||||||||||||| |||||||||    
T  10775737 agaattagaaatgacaacattagagagagtgttggggtaacacctatagtagaaaagatggtagaaactagac 10775665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 277 - 444
Target Start/End: Original strand, 17900382 - 17900549
Alignment:
Q  277 aacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttgg 376  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||||   |||| || || |||||||||||||| |||  | |||||    
T  17900382 aacataaagtaagcgtagcagaaatgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaatgacgacattagagacggagttgg 17900481  T
Q  377 ggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| || ||| |||||||||| |||| |||||||||| |  || ||| |||| | |||||||||||    
T  17900482 ggtagcacctatagtagaaaagacggtagaaactagactcatgtggtttgggcacgtagagagaagac 17900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 436137 - 436298
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| || | ||||||||||||||||| | ||| ||||||  ||||| |||||| || |||||||     
T  436137 aagtaagtgtagcagagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccattagagagagagtgggggtagc 436236  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| |||||| |||||| |||||||||||    
T  436237 acctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagac 436298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 280 - 470
Target Start/End: Original strand, 54470112 - 54470302
Alignment:
Q  280 ataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggt 379  Q
    ||||| ||||||||| | | |||| |||||||| |||||||||||| |||||||||   ||||  | |  |||| || |||||| |||||| ||||||||    
T  54470112 ataaattaagcgtaatagagatgaggatgttgcattggatgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagttggggt 54470211  T
Q  380 aggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagta 470  Q
    || || ||| ||||||||||||||  ||||||||||||  || ||| |||||| |||||||||||||| || ||  |||||||| ||||||    
T  54470212 agcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagta 54470302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 31960188 - 31960027
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || |||||||     
T  31960188 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagc 31960089  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  31960088 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 31960027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 33227134 - 33227278
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||| | ||| ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  33227134 atgaggatgttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 33227233  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| |  ||| |||||| |||||||||||    
T  33227234 tggtagaaaataggcttagattgtttgggcatgtagagagaagac 33227278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 48174450 - 48174306
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||||||||  | ||  ||||||  ||||| |||||| || ||||||  || ||| |||||||||     
T  48174450 atgaggatgttgcgttggatgagtggtaagactagacatgatatgattaggaatgacaccattagagagagagtgggggtaacacctatagtagaaaagt 48174351  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| |||||| |||||| |||||||||||    
T  48174350 tggtagaaaataggcttagatgatttgggcatgtagagagaagac 48174306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 314 - 480
Target Start/End: Original strand, 10208977 - 10209139
Alignment:
Q  314 ttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactaga 413  Q
    |||||||||||| |||||||||   ||||||| || ||||||| |||||| ||||    ||||||||| || ||| ||||||||||||| | |||||| |    
T  10208977 ttggatgtgtggtaagactagatgggatagaattagaaatgacaacattagagag----ttggggtagaacctatagtagaaaagatggcagaaactaaa 10209072  T
Q  414 cttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 480  Q
    |||||||| ||| |||||| || |||||||| ||  | |||  ||||||| ||||||||| ||||||    
T  10209073 cttagttggtttgggcatgtagcgagaagacctgtgaattttttagtaaggagagtagatcagatgg 10209139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 53707702 - 53707863
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| || | ||||||||||||||||| ||||  ||||||  ||||| | |||| || | |||||     
T  53707702 aagtaagtgtagcagagatgaggatgttgcgttggatgagtagtaagactagacatgataggactaggaatgacaccattagaaagagagtggaggtagc 53707801  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  53707802 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 53707863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 264 - 380
Target Start/End: Original strand, 18499762 - 18499878
Alignment:
Q  264 aagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatta 363  Q
    ||||||||  || ||||||  |||||| || || |||||| ||||||| ||||||||||||  ||||||||||  |||||||||||||||||||||| ||    
T  18499762 aagaaccaacacgaacatacggtaagcatagcagaaatgaagatgttgtgttggatgtgtgataagactagacgagatagaactaaaaatgacgacacta 18499861  T
Q  364 aagagagggttggggta 380  Q
     |||||  |||||||||    
T  18499862 gagagaaagttggggta 18499878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 443
Target Start/End: Original strand, 33709844 - 33709992
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacat-----gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtaga 394  Q
    |||||||||||||||||||||||||| ||||||||||||     ||||| | || ||||| | |||||| |||||| |||||||||  || ||| |||||    
T  33709844 atgatgatgttgcgttggatgtgtggtaagactagacatgataggataggattagaaatggcaacattagagagagagttggggtaacacctatagtaga 33709943  T
Q  395 aaagatggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    |||||||||  |||||||  |||| || ||| ||||||  |||||||||    
T  33709944 aaagatggtggaaactaggtttaggtggtttaggcatgtggagagaaga 33709992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 418
Target Start/End: Original strand, 12494658 - 12494793
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  12494658 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 12494757  T
Q  383 acttattgtagaaaagatggtaaaaactagacttag 418  Q
    || ||| ||||||||| ||||| ||| ||| |||||    
T  12494758 acctatagtagaaaagttggtagaaaataggcttag 12494793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 305 - 444
Target Start/End: Original strand, 41192764 - 41192905
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatt--aaagagagggttggggtaggacttattgtagaaaagatgg 402  Q
    ||||||||||||||||||||| | || |||||| |||| || || |||||||  | ||  | |||||| |||||||||| || ||  |||||||||||||    
T  41192764 gatgttgcgttggatgtgtggtatgattagacaggatacaattataaatgacagcgttagagagagagagttggggtagcacctacagtagaaaagatgg 41192863  T
Q  403 taaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |  ||||||||||||| ||||||  ||||| |||||||||||    
T  41192864 tggaaactagacttaggtgatttgtgcatgtagagagaagac 41192905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 250 - 443
Target Start/End: Original strand, 31458903 - 31459098
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    |||||||||| || ||||||||  || || |||||||||| ||| || | |||| ||||||||||||| || |||| ||||||||||||||||| | ||     
T  31458903 agtgttgggcagttaagaaccaacacgaaaataaagtaagtgtagcacagatgaggatgttgcgttggttgagtggtaagactagacatgataggattag 31459002  T
Q  350 aaatgacgacattaaagag--agggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
     |||||   ||||| ||||  || || | ||||| || ||| ||||||||||||||| ||| ||| ||||| || ||| |||||| | ||||||||    
T  31459003 gaatgataccattagagagacagagtcgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 444
Target Start/End: Complemental strand, 52569867 - 52569728
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||| |||||||| | || ||||||||||| ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| ||||||||| |||||    
T  52569867 gatgttgtgttggatgaggggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggta 52569768  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagac 444  Q
     ||| ||| ||||| || ||| |||||| |||||||||||    
T  52569767 gaaaataggcttagatggtttgggcatgtagagagaagac 52569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 25257929 - 25257794
Alignment:
Q  307 tgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaa 406  Q
    ||||| ||||||||||| | ||||||||||||||||||| || ||||||| |||||  |||||| |||| ||||  || ||   || ||||||||||| |    
T  25257929 tgttgtgttggatgtgtagtaagactagacatgatagaattagaaatgacaacatt--agagagagttgaggtaacacctacaatataaaagatggtaga 25257832  T
Q  407 aactagacttagttgattttggcatgcagagagaagac 444  Q
    | |||||||||| || |||  ||||| |||||||||||    
T  25257831 agctagacttaggtggtttgagcatgtagagagaagac 25257794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 425
Target Start/End: Original strand, 30807496 - 30807640
Alignment:
Q  277 aacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttgg 376  Q
    |||||||||| |||||| || ||| || |||||||||||| |||||| | || ||||||  |||||||| ||  |||||||||||  ||||||  ||||     
T  30807496 aacataaagtcagcgtagcagaaacgaggatgttgcgttgaatgtgtagtaaaactagatgtgatagaattaggaatgacgacat--aagaga--gttga 30807591  T
Q  377 ggtaggacttattgtagaaaagatggtaaaaactagacttagttgattt 425  Q
     |||| || ||| ||||||||||||||| |||||| |||||| ||||||    
T  30807592 tgtagcacatatagtagaaaagatggtagaaactaaacttaggtgattt 30807640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 31897743 - 31897584
Alignment:
Q  340 atagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagag 439  Q
    |||||| || |||||| ||||||| |||||  |||||||||| || ||  ||||||||||||||| ||||||||||| | || |||  ||||| ||||||    
T  31897743 atagaattagaaatgaggacattagagagatagttggggtagcaccta--gtagaaaagatggtagaaactagacttgggtggtttgcgcatgtagagag 31897646  T
Q  440 aagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
     |||| ||    ||  ||||| || ||||| |||||||||| ||| ||||||||||||||||    
T  31897645 cagacctgtggattctgtagttaggagagtcgattagatggaggggagtcagatcactagag 31897584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 46371988 - 46372150
Alignment:
Q  339 gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagaga 438  Q
    ||||||| || |||||| ||||||| ||| || |||||||||| || ||| || ||||| || ||| ||||||||||||| || |||  ||||| |||||    
T  46371988 gatagaattagaaatgatgacattagagatagagttggggtagcacctatagtcgaaaatattgtagaaactagacttaggtggtttgtgcatgtagaga 46372087  T
Q  439 gaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactagag 501  Q
    |||||||||    ||  ||| ||||||||| |||| |||| | ||| || |||||||||||||    
T  46372088 gaagacatgtggattctgtactaagaagagcagatcagatagaggggagccagatcactagag 46372150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 48622915 - 48622756
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||| ||||||| |||| ||||||||||||||||| | ||  ||||||  ||||  |||||| || |||||||     
T  48622915 aagtaagtgtagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccatt--agagagagtgggggtagc 48622818  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||  || ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  48622817 acccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 48622756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 33191222 - 33191061
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| ||||||||| |||||| |||| |||| |||| | ||||| | ||  ||||||  ||||| |||||| || |||||||     
T  33191222 aagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccattagagagagagtgggggtagc 33191123  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||||||||| |  ||| |||||| |||||||||||    
T  33191122 acctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagac 33191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 306 - 443
Target Start/End: Original strand, 37797783 - 37797920
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaa 405  Q
    ||||||||||||||| |||  ||||||||||||||||  | || |||||||  ||||| |||||| || | ||||| || ||| ||||||||| |||||     
T  37797783 atgttgcgttggatgagtgataagactagacatgataagattagaaatgacaccattagagagagagtggaggtagcacctatagtagaaaagttggtag 37797882  T
Q  406 aaactagacttagttgattttggcatgcagagagaaga 443  Q
    ||| ||| ||||| || ||| | |||| ||||||||||    
T  37797883 aaaataggcttagatggtttggacatgtagagagaaga 37797920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 47265559 - 47265414
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||  | ||  ||||||  ||||| |||||| || ||||||  || ||| |||||||||     
T  47265559 atgaggatgttgcgctggatgagtggtaagactagacatgataagattatgaatgacaccattatagagagagtgggggtaacacctatagtagaaaagg 47265460  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagaca 445  Q
    | ||| ||| |||  |||| |||||| |||||| ||||||||||||    
T  47265459 tagtagaaaataggtttagatgatttgggcatgtagagagaagaca 47265414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 339 - 415
Target Start/End: Complemental strand, 6478986 - 6478910
Alignment:
Q  339 gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagact 415  Q
    ||||||| || |||||| ||||||| || ||| |||||||| | || ||| ||||||||||||||||||||||||||    
T  6478986 gatagaattagaaatgatgacattagagtgagagttggggtggcacctatagtagaaaagatggtaaaaactagact 6478910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 27450530 - 27450392
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| |||||||||||||||||    || ||||||  ||||  |||||| || ||||||| || ||| |||||||||     
T  27450530 atgaggatgttgcgctggatgagtggtaagactagacatgatag----aataatgacaccatt--agagagagtgggggtagcacctatagtagaaaagt 27450437  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||||| |||| |||||||||||    
T  27450436 tggtagaaaataggcttagatggttttgacatgtagagagaagac 27450392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 27991882 - 27991702
Alignment:
Q  190 ttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgtacgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaag 289  Q
    |||||||||| ||| ||||||||| ||||  || |||||| ||  |||| |||| || |  ||||| ||| || || |||||  || |||||||| ||||    
T  27991882 ttaagttgaagggataattttatcgaacattagtaagaccaacgatgttatacgggacagggtgttaggcagtgaataaccaacacgaacataaaataag 27991783  T
Q  290 cgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
     ||| || |||||| ||||||| ||||||||||||| |||| ||||   ||||||| ||||||| |||| |||| ||||||    
T  27991782 tgtagcagaaatgaagatgttgtgttggatgtgtggtaagattagatgagatagaattaaaaataacgatattagagagag 27991702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 56375215 - 56375359
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||| ||||  | ||  ||||||  ||||| |||||| || ||||||| || |||  ||||||||     
T  56375215 atgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattagagagagagtaggggtagcacctataatagaaaagt 56375314  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| |||  || ||||| || ||| |||||| |||||||||||    
T  56375315 tggtagaaaacaggcttagatggtttgggcatgtagagagaagac 56375359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 35555939 - 35555860
Alignment:
Q  365 agagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |||||| ||| |||||| || ||| ||||||||||||||| ||||||||||||| || ||| |||||  |||||||||||    
T  35555939 agagagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagac 35555860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 317 - 447
Target Start/End: Complemental strand, 51252799 - 51252671
Alignment:
Q  317 gatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagactt 416  Q
    ||||||| | ||||||||||  ||||| | || ||||||| |||||| ||||||  ||||||||| || | | ||||||||||||||  ||||||| |||    
T  51252799 gatgtgtcgtaagactagacgagataggattagaaatgactacattagagagag--ttggggtagcacctctagtagaaaagatggtggaaactaggctt 51252702  T
Q  417 agttgattttggcatgcagagagaagacatg 447  Q
    || || | | |||||| ||||||||||||||    
T  51252701 aggtggtatgggcatgtagagagaagacatg 51252671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 15183630 - 15183668
Alignment:
Q  146 atggaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  15183630 atggaggagtgtctcaagtgttttatgtgatgcgaaagt 15183668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 417
Target Start/End: Original strand, 45423497 - 45423657
Alignment:
Q  251 gtgttgggcggtaaagaaccagaacaaacataaagt-aagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    |||||||| |||||||||||| |||||| ||||||| ||  |||||| | |||| ||||||| ||||| ||||||| ||||||||||  ||||||| ||     
T  45423497 gtgttggg-ggtaaagaacca-aacaaa-ataaagttaaaggtaacaaagatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattag 45423593  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagactta 417  Q
    ||||||| |||||| ||||    ||| ||||| || |||  |||||||||||||| ||||| ||||||    
T  45423594 aaatgacaacattatagag----ttgaggtagcacctataatagaaaagatggtagaaacttgactta 45423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 2588984 - 2589056
Alignment:
Q  368 gagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaa 441  Q
    |||||||||||||| || ||| || |||||||||||| ||||||||||||| || ||| |||||| ||||||||    
T  2588984 gagggttggggtagtacctatagt-gaaaagatggtagaaactagacttaggtggtttaggcatgtagagagaa 2589056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 370
Target Start/End: Complemental strand, 25967619 - 25967554
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    ||||||||| ||||||||||| ||||||||||||| ||| | || ||||||| |||||| ||||||    
T  25967619 gatgttgcgatggatgtgtggtaagactagacatggtaggattagaaatgactacattagagagag 25967554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 30807362 - 30807402
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaa 182  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  30807362 tgaaatggaggagtgtcttaggtgttttatgtgatgtgaaa 30807402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 36557347 - 36557267
Alignment:
Q  339 gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagt 419  Q
    ||||||| || ||||||||| |||  |||||| ||||||| || ||  || ||||||||||||||| ||||||||||||||    
T  36557347 gatagaattagaaatgacgatattggagagagagttggggcagcacccatagtagaaaagatggtagaaactagacttagt 36557267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 447
Target Start/End: Original strand, 44360014 - 44360158
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaa----gagagggttggggtaggacttattgtagaaaagatg 401  Q
    |||||| ||||||||||||| | |||||| |  ||||||| || ||||||| | |||| |    ||||| |||||||||  || ||| ||||||||||||    
T  44360014 atgttgtgttggatgtgtggtaggactaggcgagatagaattagaaatgacaatattagatggagagagagttggggtatcacctatagtagaaaagatg 44360113  T
Q  402 gtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    ||| |||||||| |||| |  ||| |||||| ||||||||||||||    
T  44360114 gtagaaactaga-ttaggttgtttgggcatgtagagagaagacatg 44360158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 1777372 - 1777329
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatag 343  Q
    |||| |||||||||||||||| |||| |||||||||||||||||    
T  1777372 atgaggatgttgcgttggatgagtggtaagactagacatgatag 1777329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 501
Target Start/End: Complemental strand, 42285967 - 42285857
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtc 489  Q
    ||||||||||||||| ||||||||||||| || ||| |||||| | ||||||||| ||    ||  ||||| ||||||| |||| || ||| ||| ||||    
T  42285967 gtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagacctgtggattctgtagtcagaagagcagatcag-tggaggggagtc 42285869  T
Q  490 agatcactagag 501  Q
    ||||||||||||    
T  42285868 agatcactagag 42285857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 416
Target Start/End: Complemental strand, 45205255 - 45205088
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    |||||||||| || ||||||||  || |  || ||||||||||| |  | |||| ||||||| |||||||| |||| ||||||||||  ||||| | ||     
T  45205255 agtgttgggcagttaagaaccaacacgagaatcaagtaagcgtagcggagatgaggatgttgtgttggatgagtggtaagactagacgggataggattag 45205156  T
Q  350 aaatgacgacattaaagagagggtt-ggggtaggacttattgtagaaaagatggtaaaaactagactt 416  Q
     ||||||  |||||| ||||| ||| |||||||  | ||| ||||||||||||||| ||| |||||||    
T  45205155 gaatgacaccattaacgagagagttgggggtagtgcctatagtagaaaagatggtagaaaatagactt 45205088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 444
Target Start/End: Original strand, 50471403 - 50471595
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||  || |||||||||  ||||| ||||| ||||| ||||| ||||||  |||||| ||||||||| ||  |||||| ||| | |||| | ||     
T  50471403 agtgttggttggcaaagaaccaacacaaaaataaattaagcttaacacaaatgagaatgttgtgttggatgtttgctaagacttgacgtaataggattag 50471502  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    | ||||| |||||| |||||   | ||||||| ||| || ||||||||||||||  |||||||  |||  || ||| |||||| |||||||||||    
T  50471503 agatgacaacattagagagac--tcggggtagcactaatagtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagac 50471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 41009709 - 41009559
Alignment:
Q  298 aaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaa 397  Q
    |||||| ||||||||||||||||   || ||||||||||||| ||| | || |||||||  |||||  ||||   | ||||||| || ||| ||||||||    
T  41009709 aaatgaggatgttgcgttggatgatcggtaagactagacatggtaggattagaaatgacatcattagggagataatgggggtagcacctatagtagaaaa 41009610  T
Q  398 gatggt-aaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    | |||| ||||| ||||||||| || |||  ||||| ||| ||||||||||    
T  41009609 gttggtaaaaaaatagacttagatggtttgtgcatgtagaaagaagacatg 41009559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 934785 - 934712
Alignment:
Q  307 tgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggta 380  Q
    ||||||||||| ||||||| | ||||||  ||||||||| || ||||||  | |||| ||||||||||||||||    
T  934785 tgttgcgttggctgtgtggtatgactaggtatgatagaattagaaatgataatattagagagagggttggggta 934712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 18966478 - 18966543
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaa 365  Q
    |||| ||||||||||||||||||||| |||| ||||||  |||| | || ||||||| ||||||||    
T  18966478 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaaa 18966543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 35690229 - 35690326
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaa 397  Q
    |||| |||||||||||||||| || | ||||||||||  ||||| | ||  ||||||  | |||||||||| |||||||||| || ||| ||||||||    
T  35690229 atgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgacacctttaaagagagagttggggtagcacctatagtagaaaa 35690326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 42037638 - 42037675
Alignment:
Q  147 tggaggagtgtctcaggtgttttatgtgatgcgaaagt 184  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  42037638 tggaggagtgcctcaggtgttttatgtgatgtgaaagt 42037675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 42037766 - 42037871
Alignment:
Q  276 aaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttg 375  Q
    ||||||||||||| |||| || ||||||  ||||||| |||  ||||||| ||||| |||  |||||||| || || ||| ||||||| |||||| |||     
T  42037766 aaacataaagtaaacgtagcagaaatgagcatgttgccttgattgtgtggtaagacaagatgtgatagaattagaagtgatgacattagagagagtgttt 42037865  T
Q  376 gggtag 381  Q
    ||||||    
T  42037866 gggtag 42037871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 46715643 - 46715582
Alignment:
Q  386 tattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    ||||||||||||||||||  ||||||| ||||| || | | |||||| ||||||||||||||    
T  46715643 tattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagacatg 46715582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 50286879 - 50286968
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagaggg 372  Q
    ||||||| ||| || | |||| || ||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| ||||||||    
T  50286879 aagtaagtgtagcagagatgaggaagttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagaggg 50286968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 287 - 416
Target Start/End: Complemental strand, 4598934 - 4598803
Alignment:
Q  287 aagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacatt--aaagagagggttggggtaggac 384  Q
    ||||||| || |||||||||||||||||||||||||||| ||||||||||  ||||||| | ||||||||||||||  | |||||| |||||||||| ||    
T  4598934 aagcgtagcagaaatgatgatgttgcgttggatgtgtggtaagactagacgggatagaattcaaaatgacgacattagagagagagagttggggtagcac 4598835  T
Q  385 ttattgtagaaaagatggtaaaaactagactt 416  Q
     ||| |||| |||||||||| |||||||||||    
T  4598834 ctatagtagtaaagatggtagaaactagactt 4598803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 36183359 - 36183520
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||   |||| |||||| || |||||||     
T  36183359 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacacaattagagagagagtaggggtagc 36183458  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||  |||||||| ||| |||||| |||||||||||    
T  36183459 acctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagac 36183520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 500
Target Start/End: Complemental strand, 23714609 - 23714418
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaa 405  Q
    |||||| ||||||||||||| |||||||||||  |||| | ||||||||||||||||| | ||||   | |||||| || ||| ||||||||||||||      
T  23714609 atgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag---ttgggtagcacatatagtagaaaagatggtgg 23714513  T
Q  406 aaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactaga 500  Q
    ||||||||||||  |  ||| |||||| ||||||||||| ||    ||  |||||||| ||||||||| | |||| ||| ||||| |||||||||    
T  23714512 aaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactaga 23714418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 500
Target Start/End: Complemental strand, 24102281 - 24102090
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaa 405  Q
    |||||| ||||||||||||| |||||||||||  |||| | ||||||||||||||||| | ||||   | |||||| || ||| ||||||||||||||      
T  24102281 atgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag---ttgggtagcacatatagtagaaaagatggtgg 24102185  T
Q  406 aaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactaga 500  Q
    ||||||||||||  |  ||| |||||| ||||||||||| ||    ||  |||||||| ||||||||| | |||| ||| ||||| |||||||||    
T  24102184 aaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactaga 24102090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 3865980 - 3866141
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | ||||||||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||  |||||| || |||||||     
T  3865980 aagtaagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattggagagagagtgggggtagc 3866079  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||| ||||| ||||| ||| ||| ||||| || |||  ||||| |||||||||||    
T  3866080 acctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagac 3866141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 8180688 - 8180849
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| ||||||| |||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  8180688 aagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 8180787  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||  ||||| || ||| |||||| |||||||||||    
T  8180788 acctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtagagagaagac 8180849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 475
Target Start/End: Complemental strand, 9579053 - 9578885
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||||||||||||||||| |||| |||| ||||||||| |||||||||| |  ||  |||||| ||||||||   || ||| |||| ||||||| |     
T  9579053 gatgttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaatgtt--agagagagttggggtgacacatatagtagtaaagatgatg 9578956  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagatta 475  Q
     ||| ||||||||| || ||| | |||| ||||||||||| || || ||| ||| |||| |||||||||||    
T  9578955 taaaatagacttaggtggtttggacatgtagagagaagacctgtaaattttgtattaagtagagtagatta 9578885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 418
Target Start/End: Original strand, 7292755 - 7293029
Alignment:
Q  142 tgaaatggaggagtgtctcaggtgttttatgtgatgcgaaagtgcaagttaagttgaatggagaattttatcaaacaacagcaagacctacagtgttgta 241  Q
    ||||||| ||||||| |||||||||||||| |||||||||||| |   | ||||||||  || ||||| ||   ||||| | |||||| ||| |||||||    
T  7292755 tgaaatgaaggagtgactcaggtgttttatatgatgcgaaagtactgctcaagttgaagagaaaatttcatatgacaacggtaagaccgacaatgttgta 7292854  T
Q  242 cgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgat 341  Q
    || || |  |||||||| ||| ||||||||  |  |||||||| ||||||||  | |||| |  |||||| |||||||| || | | |||||||   |||    
T  7292855 cgggacaaggtgttgggtggtgaagaaccaacatgaacataaaataagcgtagtagaaataagaatgttgtgttggatgagttgtatgactagatgagat 7292954  T
Q  342 agaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttag 418  Q
    | || || |||||||||||  |||||||  | |||||||| || ||| ||||||||||||   ||||||||||||||    
T  7292955 acaattagaaatgacgacaagaaagaga--gctggggtagcacctatagtagaaaagatgtagaaaactagacttag 7293029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 38429809 - 38429953
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||| || || ||| |||||||||     
T  38429809 atgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggcagcacctatagtagaaaagt 38429908  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| | |||||||||    
T  38429909 tggtagaaaataggcttagatggtttggacatgtaaagagaagac 38429953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 490
Target Start/End: Original strand, 42092444 - 42092632
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    ||||||||||||| |||||||||| | ||||||||||  ||||  | || ||||||| |  ||| ||||||  |||||||||  | |||  |||||||||    
T  42092444 atgatgatgttgcattggatgtgtagtaagactagacgggatatgattagaaatgacaatgttagagagag--ttggggtagcgcctatactagaaaaga 42092541  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtca 490  Q
    ||||| ||||||   |||| |||| | |||||| ||||||||| | || |  ||| |||||||| |||||||||||||||| ||| |||||    
T  42092542 tggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagggtagtca 42092632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 444
Target Start/End: Complemental strand, 41763448 - 41763255
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||||||||| ||||||||  || |   ||||||||| ||| |  | |||| ||||||||| |||||| |||| ||||||||||| ||||| | ||     
T  41763448 agtgttgggcggttaagaaccaacacgagagtaaagtaagtgtagcggagatgaggatgttgcgatggatgagtggtaagactagacaagataggattag 41763349  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
     ||||||  ||||| |||||| | |||||||  || ||| ||||||||| ||||| ||| ||| ||||| || ||| | ||||||||||||||||    
T  41763348 gaatgacaccattagagagagag-tggggtaacacctatagtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagac 41763255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 9556720 - 9556581
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||| ||||||||||||| |||| |||||  ||||  | || ||||||| |||||| |||||  |||||||||  |||||| |||||||| |||||     
T  9556720 gatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagttggggtaacacttatagtagaaaa-atggtg 9556622  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagaca 445  Q
     ||| ||| ||||| || ||| |||||| ||||||||||||    
T  9556621 gaaaataggcttaggtggtttaggcatgtagagagaagaca 9556581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 350 - 497
Target Start/End: Complemental strand, 37481924 - 37481777
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgca 449  Q
    ||||||| |||||| |||||| ||||||||||  | ||| ||| ||||||||||  || |||| ||||| || |||  ||||| ||||||||||| ||      
T  37481924 aaatgacaacattagagagagagttggggtagttcctatagtaaaaaagatggttgaacctaggcttaggtggtttgagcatgtagagagaagacttgtg 37481825  T
Q  450 attttggtagtaagaagagtagattagatggcgggaagtcagatcact 497  Q
    | ||| ||||| || ||||||||| |||||| ||| ||| ||||||||    
T  37481824 aattttgtagttaggagagtagatcagatggaggggagttagatcact 37481777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 495
Target Start/End: Original strand, 18958904 - 18959031
Alignment:
Q  372 gttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttg----gcatgcagagagaagacatgcaattttggtagtaagaaga 467  Q
    |||||||||| || ||| ||||||||||||||  ||| ||| ||||| || ||| |    ||||||||||||||||| ||||  ||| |||||||| |||    
T  18958904 gttggggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagacctgcagcttttgtagtaaggaga 18959003  T
Q  468 gtagattagatggcgggaagtcagatca 495  Q
    |||||| |||||| ||  ||||||||||    
T  18959004 gtagatcagatggaggatagtcagatca 18959031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 444
Target Start/End: Original strand, 40759051 - 40759169
Alignment:
Q  327 aagactagacatgatagaactaaaaatgacgacattaaagagag-ggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattt 425  Q
    ||||||||||| ||||  | || ||||||| |||||| |||||| ||||||| ||| |||||| |||||||| |||||  |||||||| |||| || |||    
T  40759051 aagactagacaagataagattagaaatgacaacattagagagagaggttgggttagcacttatagtagaaaaaatggtggaaactagagttaggtggttt 40759150  T
Q  426 tggcatgcagagagaagac 444  Q
      ||||| |||||||||||    
T  40759151 gtgcatgtagagagaagac 40759169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 7825263 - 7825319
Alignment:
Q  280 ataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagac 336  Q
    |||||||||||||| || | || | ||||||||||||||||||||| ||||||||||    
T  7825263 ataaagtaagcgtagcagagattaggatgttgcgttggatgtgtggtaagactagac 7825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 416
Target Start/End: Original strand, 38434876 - 38434992
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||| ||||||| |||| || |||||||  || |  | || ||||||| |||||| ||||||  ||||||||| || ||| ||||||||||    
T  38434876 atgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattagagagagaattggggtagcacctatagtagaaaaga 38434975  T
Q  400 tggtaaaaactagactt 416  Q
    ||||  |||||||||||    
T  38434976 tggtggaaactagactt 38434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 43752244 - 43752160
Alignment:
Q  360 attaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |||| |||||| |||||||||| || ||| ||||||||| ||||| ||| ||| ||||| |||||| | |||| |||||||||||    
T  43752244 attagagagagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagac 43752160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 45367981 - 45367838
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||||||||||||| ||||||  ||| ||||||||||| ||||| | ||| ||||||  ||||| |||||| |  ||||||| || ||| |||||||||     
T  45367981 atgatgatgttgcgctggatgaatggtaagactagacaagataggattaagaatgacaccattagagagagtg-gggggtagcacctatagtagaaaagt 45367883  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||  ||||| || ||| | |||| |||||||||||    
T  45367882 tggtagaaaataaccttagatggtttggacatgtagagagaagac 45367838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 501
Target Start/End: Complemental strand, 44437988 - 44437877
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtc 489  Q
    ||||||||||||||| ||||||||| ||| || ||| |||||| ||||||||||| ||    ||  ||| |||| ||  ||||| |||||| ||| ||||    
T  44437988 gtagaaaagatggtagaaactagacataggtggtttcggcatgtagagagaagacttgtggattctgtaataaggagtatagatgagatggaggggagtc 44437889  T
Q  490 agatcactagag 501  Q
    ||||||||||||    
T  44437888 agatcactagag 44437877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 45077673 - 45077727
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatg 354  Q
    |||| ||||||||||||||||||||| ||||||||||  ||||||| || |||||    
T  45077673 atgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 13241052 - 13240955
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    ||||||| |||||| ||||||  |||| |||| |  |||  |||||||||||||  ||||||| ||||| || ||| |||||| ||||||||||||||    
T  13241052 aaatgacaacattagagagagaattggagtagcaagtatgttagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagagaagacatg 13240955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 260 - 440
Target Start/End: Complemental strand, 36514602 - 36514424
Alignment:
Q  260 ggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgac 359  Q
    ||||||||||||  || || ||||| |||| ||| || | |||| ||||||||||||||||||||| ||||||| ||  ||||||| || ||| ||| ||    
T  36514602 ggtaaagaaccaacacgaaaataaattaagtgtagcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaac 36514503  T
Q  360 attaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagaga 440  Q
    |||| ||||||  ||||||||| || ||| ||||||||||||||| ||||||||||||| || ||| |||||| |||||||    
T  36514502 attagagagag--ttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagaga 36514424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 234 - 497
Target Start/End: Original strand, 5335781 - 5336042
Alignment:
Q  234 gtgttgtacgagatatagtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagacta 333  Q
    ||||||||||||| | ||||||||||||||||||||  | ||||||||||  |||| ||| || | |||| |||||||||||| |||||||| |||||||    
T  5335781 gtgttgtacgagacagagtgttgggcggtaaagaacgggcacaaacataagttaagtgtagcagagatgaggatgttgcgttgaatgtgtggtaagacta 5335880  T
Q  334 gacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgc 433  Q
    ||||  ||  || || ||||||  |||||  |||||| |||||||||| |  ||| |||| |||||||||  ||||||||||||| || ||| |||||      
T  5335881 gacagaatgcaattagaaatgataacatt--agagagagttggggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcatat 5335978  T
Q  434 agagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcact 497  Q
    ||||||||||  ||    ||  ||||| || |||||||||||||||| ||| ||||| ||||||    
T  5335979 agagagaagaactgtggattctgtagttaggagagtagattagatggaggggagtcaaatcact 5336042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 300 - 501
Target Start/End: Complemental strand, 19262788 - 19262590
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||| |||  ||| ||||| || |||||||||||||||  || ||||||| | |||| ||||||  ||||||||| || ||||||||||||||    
T  19262788 atgaggatgttacgtgtgatatgtggtaatactagacatgatagagttagaaatgacaatattagagagag--ttggggtagcacctattgtagaaaaga 19262691  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactag 499  Q
    ||||| ||||| | ||||| || |||  ||||| ||||||||||| || |  ||| |||||||||||||||||| |||||| | | ||||| ||||||||    
T  19262690 tggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagattt-gtagtaagaagagtagatcagatggagtgtagtcaaatcactag 19262592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 300 - 501
Target Start/End: Original strand, 39811882 - 39812083
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||| |||||||||||| |||||||||| |||||| | || ||||||| |||||| |||||| ||||||| || || |||  ||||||| |    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagttggggcagcacctatcatagaaaaaa 39811981  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactag 499  Q
    |||| |||||| | ||||| |  ||| |||||| |||||||||| ||| |  ||   ||||||| ||||||||| |||||| || ||| || ||||||||    
T  39811982 tggtgaaaactcggcttaggtagtttgggcatgtagagagaagagatgtagattctatagtaaggagagtagatcagatggaggaaagccaaatcactag 39812081  T
Q  500 ag 501  Q
    ||    
T  39812082 ag 39812083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 34869345 - 34869489
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  34869345 atgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 34869444  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  34869445 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 34869489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 298 - 418
Target Start/End: Complemental strand, 48736258 - 48736138
Alignment:
Q  298 aaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaa 397  Q
    |||||| |||||||||||| |||||||| |||||||||   |||| || || |||||||||||||| |||||| |||||||||| || ||  ||||||||    
T  48736258 aaatgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagttggggtagcacctacagtagaaaa 48736159  T
Q  398 gatggtaaaaactagacttag 418  Q
    ||||| | |||||||||||||    
T  48736158 gatgggagaaactagacttag 48736138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 33072879 - 33073021
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||  |||||| || ||||||| || ||| |||||||||     
T  33072879 atgatgatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccatt--agagagagtgggggtagcacctatagtagaaaagt 33072976  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| |||||| |||||| |||||||||||    
T  33072977 tggtagaaaataggcttagatgatttgggcatgtagagagaagac 33073021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 49029184 - 49029345
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||| ||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  49029184 aagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 49029283  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  49029284 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 49029345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 13859365 - 13859221
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||| | |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  13859365 atgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 13859266  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  13859265 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 13859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 501
Target Start/End: Original strand, 43282330 - 43282533
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaa---agagagggttggggtaggacttattgtagaaa 396  Q
    |||| ||||||||||| ||||||||| ||| ||||||||||||  | || ||||||| ||||| |   |||||| |||||||||| || ||| |||||||    
T  43282330 atgaggatgttgcgttagatgtgtggtaagtctagacatgatatgattagaaatgacaacatttagagagagagagttggggtagcacctatagtagaaa 43282429  T
Q  397 agatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcac 496  Q
    ||  |||  ||||||| ||||| ||| || |||||| ||||||||||| ||||  ||  |||| ||| |||||||| ||||||| ||  |||||||||||    
T  43282430 agtcggtggaaactaggcttaggtgaattgggcatgtagagagaagacttgcagattctgtaggaaggagagtaga-tagatggaggatagtcagatcac 43282528  T
Q  497 tagag 501  Q
     ||||    
T  43282529 aagag 43282533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 33350180 - 33350019
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||| ||||||| |||| ||||||||||||||||| | ||| ||||||  ||||| |||||| || ||||| |     
T  33350180 aagtaagtgtagcagagatgaggatgttgccttggatgagtggtaagactagacatgataggattaagaatgacaccattagagagagagtgggggttgc 33350081  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| || || ||| ||| ||||| || ||| |||||| |||||||||||    
T  33350080 acctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagac 33350019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 35906575 - 35906414
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || | |||||     
T  35906575 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggaggtagc 35906476  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  35906475 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 35906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 37617869 - 37618014
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  37617869 atgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 37617968  T
Q  400 tggta-aaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| |||| ||| ||||| || ||| |||||| |||||||||||    
T  37617969 tggtagaaaaataggcttagatggtttgggcatgtagagagaagac 37618014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 300 - 501
Target Start/End: Original strand, 47848599 - 47848800
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||| ||||||||||||| ||||||||||  ||||| |  | || |||  |||||| |||||| ||||||||||  | ||| ||||||||||    
T  47848599 atgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagttggggtagcgcctatagtagaaaaga 47848698  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtcagatcactag 499  Q
    ||||  ||| ||| ||||| || ||| ||||||  |||||||||| || || ||  ||| |||| ||||||||| |||||| ||  |||| |||||||||    
T  47848699 tggtggaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgatcactag 47848798  T
Q  500 ag 501  Q
    ||    
T  47848799 ag 47848800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 39906727 - 39906583
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||| ||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| ||  |||||| || ||| |||||||||     
T  39906727 atgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgagggtagcacctatagtagaaaagt 39906628  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| |||||| |||||| |||||||||||    
T  39906627 tggtagaaaataggcttagatgatttgggcatgtagagagaagac 39906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Complemental strand, 12841649 - 12841488
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| ||||||| |||||||| |||| || |||||||||||||| | ||  ||||||  ||||| |||||| || | |||||     
T  12841649 aagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaaaactagacatgataggattaggaatgaccccattagagagagagtggaggtagc 12841550  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  12841549 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 12841488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 31005131 - 31005292
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||| ||  ||||| |||||| || |||||||     
T  31005131 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccattagagagagagtgggggtagc 31005230  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| |||  |||| || ||| |||||| |||||||||||    
T  31005231 acctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagac 31005292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 305 - 485
Target Start/End: Original strand, 28020894 - 28021074
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    |||||||| || ||||||||  |||||| |||||||||  | |  ||||||  |||||| ||| || |||||||||| |||||| ||||||||||||||     
T  28020894 gatgttgcattagatgtgtgataagactggacatgatatgattcgaaatgataacattagagaaagagttggggtagcacttatcgtagaaaagatggtg 28020993  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcggga 485  Q
     ||||| | ||||| || ||| |||||| ||||||||||  || |  ||  ||| |||| |||||||||||||||| ||||    
T  28020994 gaaacttggcttaggtggtttgggcatgtagagagaagatttgtaggttctgtaataaggagagtagattagatggaggga 28021074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 38606930 - 38607073
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    ||||| |||||||| |||||| |||| ||||||||||||||||| | ||  |||||| ||||| ||||||| || ||||||| || ||| ||||||| |     
T  38606930 atgataatgttgcgctggatgagtggtaagactagacatgataggattaggaatgacaacatt-aagagagagtgggggtagcacctatagtagaaaggt 38607028  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  38607029 tggtagaaaataggcttagatggtttggacatgtagagagaagac 38607073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 14593686 - 14593834
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggt----tggggtaggacttattgtagaa 395  Q
    |||| ||||||||||||||||||||| ||||||||||   |  ||| || ||||||| |||||| |||||| ||    ||||||   || ||| ||||||    
T  14593686 atgaggatgttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaa 14593785  T
Q  396 aagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || |||||| ||||||||||||| |||||| |||||| || ||||||||    
T  14593786 aaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 14593834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 444
Target Start/End: Complemental strand, 44855524 - 44855385
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||| | |||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || ||| ||| || ||| ||||||||| |||||    
T  44855524 gatgttgtgctggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggatagtacctatagtagaaaagttggta 44855425  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagac 444  Q
     ||| ||| ||||| || ||| |||||| |||||||||||    
T  44855424 gaaaataggcttagatggtttgggcatgtagagagaagac 44855385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 45836837 - 45836693
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| |||| |||||| ||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  45836837 atgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 45836738  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  45836737 tggtagaaaataggcttagatggtttggacatgtagagagaagac 45836693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 36651902 - 36652061
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| |||||| | |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||  ||||||||| ||||| |     
T  36651902 aagtaagtgtaacagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt--agagagggtaggggtggc 36651999  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |   || ||||||||| ||||| ||| ||| ||||| || |||  ||||| |||||||||||    
T  36652000 atccatagtagaaaagttggtagaaaataggcttagatggtttcagcatgtagagagaagac 36652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 11593868 - 11594029
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||| ||||  | ||  ||||||  ||||  |||||| || |||||||     
T  11593868 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatttgagagagagtgggggtagc 11593967  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||   |||| || ||| |||||| |||||||||||    
T  11593968 acctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagac 11594029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 27022057 - 27021993
Alignment:
Q  306 atgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    ||||||| |||||||||||  ||||||||||| ||||| | |||||||||| |||||| ||||||    
T  27022057 atgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacattagagagag 27021993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 450
Target Start/End: Original strand, 40830183 - 40830298
Alignment:
Q  332 tagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcat 431  Q
    |||||||||||||| || ||||||| | |||| | ||||   | |||||| || ||||| ||||||||||||| |||||  |||||| || ||| |||||    
T  40830183 tagacatgatagaattagaaatgacaatattagaaagag---ttgggtagcacctattgaagaaaagatggtagaaactctacttaggtggtttgggcat 40830279  T
Q  432 gcagagagaagacatgcaa 450  Q
    | ||||||||||| |||||    
T  40830280 gaagagagaagacctgcaa 40830298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 46356208 - 46356068
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    |||||||||||| ||| |||| ||||||||||| ||||| | ||  ||||||  ||| | ||||||  | ||||||| || ||| ||||||||| |||||    
T  46356208 gatgttgcgttgaatgagtggtaagactagacaggataggattaggaatgacaccatcagagagagaatgggggtagcacctatagtagaaaagttggta 46356109  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagaca 445  Q
     ||| |||  |||| || ||| |||||| ||||||||||||    
T  46356108 gaaaataggtttagatggtttgggcatgtagagagaagaca 46356068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 43281601 - 43281743
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| |||||||||||  |||| | ||  ||||||  ||||  |||||| || ||||||| || ||| |||||||||     
T  43281601 atgaggatgttgcgctggatgagtggtaagactagacaatataggattaggaatgacaccatt--agagagagtgggggtagcacctatagtagaaaagt 43281698  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  43281699 tggtagaaaataggcttagatggtttggacatgtagagagaagac 43281743  T

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Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 52138708 - 52138869
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || |||||||     
T  52138708 aagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagc 52138807  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||| ||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  52138808 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 52138869  T

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Target: chr3; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 250 - 401
Target Start/End: Complemental strand, 345118 - 344967
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    ||||||| ||||| ||||||||  ||||  ||||||||||| || |  |||| | ||||||  ||||||| ||||| ||||||||||  ||||| | ||     
T  345118 agtgttgagcggttaagaaccaacacaagaataaagtaagcatagcggaaattaggatgttatgttggatttgtggtaagactagacgagataggattag 345019  T
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatg 401  Q
    |||||| ||||||| |||||| |||||||||| |||||| ||||||||||||    
T  345018 aaatgatgacattagagagagagttggggtagcacttatagtagaaaagatg 344967  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 2341071 - 2340968
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||| || ||||||  |||||| |||| | |||||||||| ||   | ||||||||||    
T  2341071 atgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattagagagggtgttggggtagcaccattcgtagaaaaga 2340972  T
Q  400 tggt 403  Q
    ||||    
T  2340971 tggt 2340968  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 283 - 441
Target Start/End: Original strand, 28245345 - 28245503
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    ||||||| ||| || | |||| |||||||||||||||| |||| |||||||| |  ||||| | ||  ||||||  ||||| |||||| || |||||||     
T  28245345 aagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcattagagagagagtgggggtagc 28245444  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaa 441  Q
    || ||| ||||||||| ||||| ||| ||||||||| || ||| |||||| ||||||||    
T  28245445 acctatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaa 28245503  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 36820309 - 36820174
Alignment:
Q  307 tgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaa 406  Q
    ||||||||||||||||||| ||||||||||  ||||| | || |||||||||||||  |||||| |||||||||| || |||  ||| |||||||||  |    
T  36820309 tgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacatt--agagagagttggggtagcacctatattagcaaagatggtgga 36820212  T
Q  407 aactagacttagttgattttggcatgcagagagaagac 444  Q
    |||||| ||||| || ||| | |||| | |||||||||    
T  36820211 aactaggcttaggtggtttagacatgtaaagagaagac 36820174  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 444
Target Start/End: Original strand, 3987011 - 3987116
Alignment:
Q  339 gatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagaga 438  Q
    ||||||| || ||||||||| |||  |||||| |||||||||  || ||| ||||||||||||||| ||||||||||||| || ||| || ||| |||||    
T  3987011 gatagaattagaaatgacgatattggagagagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagaga 3987110  T
Q  439 gaagac 444  Q
    ||||||    
T  3987111 gaagac 3987116  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 11581460 - 11581577
Alignment:
Q  391 tagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtca 490  Q
    |||||||||||||| ||||||||||||| || ||| || ||| ||||||||||||||  | ||  ||||||||||||||| || |||||  ||  |||||    
T  11581460 tagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagacatgtgaattatgtagtaagaagagtacatcagatgtaggtgagtca 11581559  T
Q  491 gatcactagagatatgag 508  Q
     |||||||||| ||||||    
T  11581560 aatcactagaggtatgag 11581577  T

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Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 444
Target Start/End: Original strand, 54128286 - 54128447
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtagg 382  Q
    |||||||| || || | |||| ||||||||||| |||| |||| || |||||||  ||||| | ||  ||||||  ||||| |||||| ||||||||||     
T  54128286 aagtaagcttagcagagatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattagagagagtgttggggtagc 54128385  T
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    || ||| ||||||||||||||| ||| ||| ||||| || ||| |||||| ||||| |||||    
T  54128386 acctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagac 54128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 54278945 - 54279089
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||  |||| ||||||||||| ||||||| ||  ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  54278945 atgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccattagagagagagtaggggtagcacctatagtagaaaagt 54279044  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| |||||  | ||| |||| | |||||||||||    
T  54279045 tggtagaaaataggcttagacggtttgggcacgtagagagaagac 54279089  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 480
Target Start/End: Original strand, 19736921 - 19737102
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggt-aggacttattgtagaaaag 398  Q
    |||||||||||| |||||||| |||| ||||||||||  ||||  | || || |||   ||||| |||||| |||||||  || || ||| |||||||||    
T  19736921 atgatgatgttgtgttggatgagtggtaagactagacgggatacgattagaagtgaaatcattagagagagagttgggggcagcacctatagtagaaaag 19737020  T
Q  399 atggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 480  Q
    |||||| ||| |||  |||| || |||  ||||||||||||||||| || |  | | |||||||||||||||||| ||||||    
T  19737021 atggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatgg 19737102  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Original strand, 21998 - 22141
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||| | ||  |||| |  ||||| |||||| || ||||||| || ||| |||||||||     
T  21998 atgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgtcaccattagagagagagtgggggtagcacctatagtagaaaagt 22097  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  22098 tggtagaaa-taggcttagatggtttggacatgtagagagaagac 22141  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 39235154 - 39235258
Alignment:
Q  391 tagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcgggaagtca 490  Q
    |||||||||||||| ||| ||| ||||| || ||| |||||| ||||||||||| || |  | | |||||| ||||||||||| |||||| || ||||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtca 39235253  T
Q  491 gatca 495  Q
    |||||    
T  39235254 gatca 39235258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 370
Target Start/End: Original strand, 46567991 - 46568111
Alignment:
Q  250 agtgttgggcggtaaagaaccagaacaaacataaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaa 349  Q
    |||||| |||||| ||||||||| || |||||||  |||| ||| || | |||| ||||||| ||||||||||||  ||||||||||  ||| ||| ||     
T  46567991 agtgttaggcggtgaagaaccagcacgaacataagttaagtgtagcagagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattag 46568090  T
Q  350 aaatgacgacattaaagagag 370  Q
    ||||||| |||||| ||||||    
T  46568091 aaatgacaacattagagagag 46568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 47233953 - 47233809
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||| |||||||||||| |||| ||||||||||||||||  | || |||||||  ||||| ||||||  | | ||||| || ||| |||||||||     
T  47233953 atgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattagagagagaatggaggtagcacctatagtagaaaagt 47233854  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||| ||| ||| ||||| || ||| | |||| |||||||||||    
T  47233853 tggtagaaaataggcttagatggtttggacatgtagagagaagac 47233809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 443
Target Start/End: Complemental strand, 51448066 - 51447924
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| |||||||||||||||| |||| ||||||||||| ||||| | ||  ||||||  ||||| |||||| | | |||||| || ||| |||||||||     
T  51448066 atgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagag-tagggtagcacctatagtagaaaagt 51447968  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    ||||| ||| ||| ||||| |  ||| |||||| ||||||||||    
T  51447967 tggtagaaaataggcttagatagtttgggcatgtagagagaaga 51447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 29374945 - 29375039
Alignment:
Q  386 tattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 480  Q
    ||||| ||||||||||||| ||||| ||||||| |||||| ||| || ||||| ||||| || |  ||| |||||||| || |||||||||||||    
T  29374945 tattggagaaaagatggtagaaactcgacttaggtgatttgggcttgtagagaaaagacctgtagattttgtagtaaggagtgtagattagatgg 29375039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 21200563 - 21200620
Alignment:
Q  390 gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatg 447  Q
    ||||||||||||||  ||||||||||||| || ||| |||||| ||||||||||||||    
T  21200563 gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatg 21200620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 444
Target Start/End: Original strand, 25191285 - 25191446
Alignment:
Q  281 taaagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggta 380  Q
    ||||||||| ||| || | |||| ||||||||| |||||| |||| ||||||||||||||||  | ||| ||||||  ||||  ||||||  | ||||||    
T  25191285 taaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgatatgattaagaatgacatcatt--agagagaatgggggta 25191382  T
Q  381 ggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    | || ||| ||||||||  ||| | ||| ||||||||| || ||| | |||| |||||||||||    
T  25191383 gcacctatagtagaaaaattggaagaaaatagacttagatggtttggacatgtagagagaagac 25191446  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 31453203 - 31453151
Alignment:
Q  392 agaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||||||||||| ||||||||||||| |  |||||||||| |||||||||||    
T  31453203 agaaaagatggtagaaactagacttaggttgttttggcatgtagagagaagac 31453151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 38186969 - 38186905
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagac 414  Q
    |||||||||| | | ||||||  ||||||||  |||||| |||||||||||||||||||||||||    
T  38186969 aaatgacgacgtcatagagagaattggggtaacacttatggtagaaaagatggtaaaaactagac 38186905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 50960918 - 50960846
Alignment:
Q  372 gttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    |||||||||| || ||| ||||||||||||||| ||| ||| ||||| || ||| |||||| |||||||||||    
T  50960918 gttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagac 50960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 480
Target Start/End: Original strand, 19757826 - 19758005
Alignment:
Q  302 gatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggt-aggacttattgtagaaaagat 400  Q
    |||||||||| |||||||| |||| ||||||| ||  ||||  | || || |||   ||||| |||||| |||||||  || || ||| |||||||||||    
T  19757826 gatgatgttgtgttggatgagtggtaagactacacgagatacgattagaagtgaaatcattagagagagagttgggggcagcacctatagtagaaaagat 19757925  T
Q  401 ggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatgg 480  Q
    |||| ||| |||  |||| || |||  ||||||||||||||||| || |  | | |||||||||||||||||| ||||||    
T  19757926 ggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatgg 19758005  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 33272402 - 33272315
Alignment:
Q  283 aagtaagcgtaacataaatgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag 370  Q
    ||||||| ||| || | |||| |||||||| ||||||| |||| ||||||||||||||||| | ||| ||||||  ||||| ||||||    
T  33272402 aagtaagtgtagcagagatgaggatgttgcattggatgagtggtaagactagacatgataggattaagaatgacaccattagagagag 33272315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 39600988 - 39600894
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggt-aaaaactagacttagttgattttggcatgcagagagaagac 444  Q
    ||||||| |||||| |||||| |||||||||| || ||| ||||||||||||||  ||||| || ||||| || |||||||||| | |||||||||    
T  39600988 aaatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaaacaag-cttaggtggttttggcatgtaaagagaagac 39600894  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 383 - 501
Target Start/End: Original strand, 37351415 - 37351533
Alignment:
Q  383 acttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaagaagagtagattagatggcg 482  Q
    |||||| ||||||||||||||| |||||||||||   || ||| ||||||  |||||||| ||||  | |  ||||||||| ||||||||| ||||||      
T  37351415 acttatagtagaaaagatggtagaaactagacttgagtggtttgggcatgtggagagaagtcatgtgaatgcggtagtaaggagagtagatcagatggaa 37351514  T
Q  483 ggaagtcagatcactagag 501  Q
    || || || ||||||||||    
T  37351515 gggaggcaaatcactagag 37351533  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 365 - 480
Target Start/End: Complemental strand, 45289385 - 45289268
Alignment:
Q  365 agagagggttggggtaggacttatt--gtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgcaattttggtagtaa 462  Q
    |||||| |||||||||| || ||||  ||||||||||||||  ||| ||| ||||| || ||| |||| | |||||||| || || |  ||| |||||||    
T  45289385 agagagagttggggtagcacctattcagtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaa 45289286  T
Q  463 gaagagtagattagatgg 480  Q
    ||||||||||| ||||||    
T  45289285 gaagagtagatcagatgg 45289268  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 314 - 444
Target Start/End: Complemental strand, 49503897 - 49503767
Alignment:
Q  314 ttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactaga 413  Q
    ||||||| |||| ||||||||||  ||||| | |   ||||||  ||||| |||||| |||  ||||| || ||| ||||||||||||||| ||| |||     
T  49503897 ttggatgagtggtaagactagacgagataggattgggaatgacaccattagagagagagttcaggtagcacctatagtagaaaagatggtagaaaatagg 49503798  T
Q  414 cttagttgattttggcatgcagagagaagac 444  Q
    ||||| || ||| |||||| |||||||||||    
T  49503797 cttaggtggtttgggcatgtagagagaagac 49503767  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 503
Target Start/End: Complemental strand, 31454532 - 31454381
Alignment:
Q  350 aaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggtaaaaactagacttagttgattttggcatgcagagagaagacatgca 449  Q
    ||||||| |||||| |||||| |||||  ||| || ||| ||||||||||||||| ||||||||||| | || |||  ||||| |||||||||| ||||     
T  31454532 aaatgacaacattagagagagtgttggt-tagcacctatagtagaaaagatggtagaaactagactt-ggtggtttgtgcatgtagagagaagaaatgcg 31454435  T
Q  450 attttggtagtaagaagagtagattagatggcgggaagtcagatcactagagat 503  Q
      ||  ||||| || ||||||||| |||||| ||| ||||| |||  |||||||    
T  31454434 gattctgtagttaggagagtagatcagatggaggggagtcaaatctttagagat 31454381  T

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Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 444
Target Start/End: Original strand, 31398 - 31537
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    |||||||||||||||| |||| ||||||||||| ||||  | ||  ||||||  ||||| |||||| || ||||||| || ||| ||||||||| |||||    
T  31398 gatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggta 31497  T
Q  405 aaaactagacttagttgattttggcatgcagagagaagac 444  Q
     ||| ||| ||||| || ||| |||||| |||||||||||    
T  31498 gaaaataggcttagatggtttgggcatgtagagagaagac 31537  T

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Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 305 - 418
Target Start/End: Complemental strand, 25797 - 25684
Alignment:
Q  305 gatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaagatggta 404  Q
    ||||||| |||||||| |||| ||||||||||||||||| | ||  ||||||  ||||| |||||| || ||||||| || ||| ||||||||| |||||    
T  25797 gatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggta 25698  T
Q  405 aaaactagacttag 418  Q
     ||| ||| |||||    
T  25697 gaaaataggcttag 25684  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 444
Target Start/End: Complemental strand, 4629 - 4484
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagag-ggttggggtaggacttattgtagaaaag 398  Q
    |||| ||||||||||||||||  ||| ||||||||||||||||| | || |||||||  ||||| |||||| |  |||||| | || ||| |||||||||    
T  4629 atgaggatgttgcgttggatgaatggtaagactagacatgataggattataaatgacaccattagagagagagagtggggtggcacctatagtagaaaag 4530  T
Q  399 atggtaaaaactagacttagttgattttggcatgcagagagaagac 444  Q
     ||||||||| ||| ||||| |  ||| |||||| ||| |||||||    
T  4529 ttggtaaaaaataggcttagatagtttgggcatgtagaaagaagac 4484  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 443
Target Start/End: Original strand, 82646 - 82789
Alignment:
Q  300 atgatgatgttgcgttggatgtgtggaaagactagacatgatagaactaaaaatgacgacattaaagagagggttggggtaggacttattgtagaaaaga 399  Q
    |||| ||||||||  |||||| || | ||||||||||||||||| | ||| ||||||  ||||| |||||| || ||||||| || ||| |||||||||     
T  82646 atgaggatgttgcactggatgagtagtaagactagacatgataggattaagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagt 82745  T
Q  400 tggtaaaaactagacttagttgattttggcatgcagagagaaga 443  Q
    ||||| ||| | | ||||| |||||| | |||  ||||||||||    
T  82746 tggtagaaaatgggcttagatgatttggacatatagagagaaga 82789  T

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