View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21193_high_30 (Length: 366)
Name: NF21193_high_30
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_high_30 |
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Alignment Details
Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 29505015 - 29504831
Alignment:
| Q |
17 |
gatatgaaaacccaaattccattaaattaaatttgtcataaaaa----------tataaaatattagtcatcgaaataagtcataagtcataacagcata |
106 |
Q |
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| T |
29505015 |
gatatgaaaacccaaattccattaaactaaatttgtcataaaaaaaaaaatatatataaaatattagtcatcgaaataagtcataagtcataacagcata |
29504916 |
T |
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| Q |
107 |
acacaactcaactaaactaaaacccctcccctgagtagtgtgcgcagcttcgtaagtgagtgaaaaggcaacaatgtcgtcgatcg |
192 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29504915 |
acacaactcaactaaactaaaacccct-gagtgagtagtgtgcgcagcttcgtaagtgagtgaaaaggcaacaatgtcgtcgatcg |
29504831 |
T |
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