View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21193_high_32 (Length: 361)
Name: NF21193_high_32
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 35589011 - 35588819
Alignment:
| Q |
1 |
tactgatccttgttgttctcatcctaatccttattgttcctatcaattagtttagctttcctatacattagtttagcttcctcttagtttggtttttctg |
100 |
Q |
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| T |
35589011 |
tactggtccttgttgttctcatcctaatccttattgttcctatcaattagtttagctttcctatacattagttcagcttcctcttagtttggtttttctg |
35588912 |
T |
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| Q |
101 |
ttaatacttgtacag---------ctgtgatttattcatcaatatacataacaaaaacttctatcaatttgctctctgcatactttctttaca |
184 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35588911 |
ttaatacttgtacagtatattaacctgtgatttattcatcaatatacataacaaaaacttctatcaatttgctctctgcatactttctttaca |
35588819 |
T |
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