View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21193_high_51 (Length: 233)
Name: NF21193_high_51
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_high_51 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28139097 - 28139329
Alignment:
| Q |
1 |
aaatgacaaaaggtattataaatattgacggagggagtagatcaaaactttatctgcaacctatacaaacaaaccatgattgtgtaatttttaaaccaac |
100 |
Q |
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| T |
28139097 |
aaatgacaaaaggtattataaatattgacggagggagtagatcaaaactttatctgcaacctatacaaacaaaccatgattgtgtaatttttaaaccaac |
28139196 |
T |
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| Q |
101 |
ttcgtgacatacaaagttgattattaaattattattgatcacgaaagagagagaacatatgaaggaagtttcggaatggtcattggtcatatatcacata |
200 |
Q |
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| T |
28139197 |
ttcgtgacatacaaagttgattattaaattattattgatcacgaaagagagagaacatatgaaggaagtttcggaatggtcattggtcatatatcacata |
28139296 |
T |
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| Q |
201 |
cggattctccaaaggataaacgttgaccattat |
233 |
Q |
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| T |
28139297 |
cggattctccaaagtataaccgttgaccattat |
28139329 |
T |
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