View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21193_high_56 (Length: 214)
Name: NF21193_high_56
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 38299704 - 38299509
Alignment:
| Q |
1 |
gaggaggcaaaacaatatcttgacataaccactccatgatgttcttcattgagtcgtactcgcaatgacgaaaggaataatcagatgaaaggatcatgga |
100 |
Q |
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|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38299704 |
gaggaggcaaaacaatatcttgacttaaccattccatgatgttcttcattgagtcgtactcgcaatgacgaaaggaataatcagatgaaaggatcatgga |
38299605 |
T |
|
| Q |
101 |
tgcacaagtttttactaaccgtgatatcttttgctccattgtctcgttatcagagtccagtaaatctaccgcgcaatcggattccatattttcttg |
196 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38299604 |
tgcacaagtttttactaaccgtgattccttttgctccattgtctcgtcatcagagtccagtaaatctacctcgcaatcggattccatattttcttg |
38299509 |
T |
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