View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21193_low_22 (Length: 451)
Name: NF21193_low_22
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_low_22 |
 | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0418 (1 HSPs) |
| | |
|
| [»] scaffold0131 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 235 - 437
Target Start/End: Complemental strand, 588560 - 588358
Alignment:
| Q |
235 |
ttctctcaaaattcttttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaac |
334 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
588560 |
ttctctcaaaattcttttgagttgtaaagtgggaaagatttcttttgtttacttaggcttacctattggcggtaatctgcggcgtcttagcttttgggac |
588461 |
T |
|
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
588460 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgcttggtacttctaaaatctgtcttgacctctc |
588361 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
588360 |
tgc |
588358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 588794 - 588650
Alignment:
| Q |
1 |
tcagaaaaacaagtatctcctctcctaatcatacatttcataatcaaaacaaaggacagatacatatgacatctcaaaatcaaataaaatacatataaaa |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
588794 |
tcagaaaaacaagtatcgcctctcctaatcattcatttcataatcaaaacaaaggacaaatacatatgacatctcaaaatcaaataaaatacatataaaa |
588695 |
T |
|
| Q |
101 |
tgtatacatgccactaccacattgtttcacaaagagaataggtac |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
588694 |
tgtatacatgccactaccacattgtttcacaaagagaataggtac |
588650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 251 - 437
Target Start/End: Original strand, 10486005 - 10486191
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaa |
350 |
Q |
| |
|
||||| || |||||||| ||| ||| ||| | ||||| ||||| |||||||| ||||||| ||| ||| |||| |||||| ||||||||||| |||||| |
|
|
| T |
10486005 |
ttgagctgcaaagtgggtaaggttcctttcttgtacttgggcttgcctattgggggtaatccgcgtcgtcttagtttttgggaccctattgtgcatcgaa |
10486104 |
T |
|
| Q |
351 |
ttcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
| |||||||||||||| ||||||||||||| ||||| || || || || |||||||| ||| |||||||||||||||| ||||||| |
|
|
| T |
10486105 |
tcaaagctagacttacgggttggaatagccggtttctttcctttggaggacgtttggttcttttaaaatctgtcttgacttctctgc |
10486191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 421
Target Start/End: Complemental strand, 31865332 - 31865164
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaa |
350 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| || | || ||||| | |||||| |||||||||||| | ||| |||||| |||||||||||||||| | |
|
|
| T |
31865332 |
ttgagttgtaaagtgggtaaggttcctttcgtat--ttgggcttgcttattgggggtaatctgcggagacttaacttttgagaccctattgtgaatcgta |
31865235 |
T |
|
| Q |
351 |
ttcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatct |
421 |
Q |
| |
|
|| || |||| | || ||||||| ||||||||||||||||| || ||||| ||||| || || |||||| |
|
|
| T |
31865234 |
ttaaatctaggttgtcgggttggaaaagccgatttctctcttttggaggccgcttggttctacttaaatct |
31865164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 437
Target Start/End: Original strand, 35121794 - 35121977
Alignment:
| Q |
254 |
agttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgt-tttagcttttggaaccctattgtgaatcgaatt |
352 |
Q |
| |
|
|||||||||||||| ||| ||| |||| | ||| || | || |||||||| ||||||| |||| | ||||| |||||| | ||| |||||||| | ||| |
|
|
| T |
35121794 |
agttgtaaagtgggtaaggttccttttttgtacctatgtttgcctattgggggtaatccgcggagactttag-ttttgggatcctgttgtgaatagtatt |
35121892 |
T |
|
| Q |
353 |
caagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|| ||||||| || | || ||||||||||||||||| || ||||| || ||| | || |||||||| || ||||| ||||||| |
|
|
| T |
35121893 |
aaatctagactgtcgggatgcaatagccgatttctctcgtttggtggtcgcttgattctcctaaaatcagttttgacttctctgc |
35121977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 429
Target Start/End: Original strand, 12378074 - 12378249
Alignment:
| Q |
254 |
agttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattc |
353 |
Q |
| |
|
||||| |||||||| ||| ||| |||| | ||||||||||| |||||||| |||||||||| ||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
12378074 |
agttgcaaagtgggtaaggttccttttttgtacttaggcttccctattgggggtaatctgcatcgtcttagtttttgggaccctattgtgaatcgaattg |
12378173 |
T |
|
| Q |
354 |
aagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgac |
429 |
Q |
| |
|
|||||||| |||||||| |||||| || ||| |||| || || || | |||||||||||||||||||||||||| |
|
|
| T |
12378174 |
aagctagaagtacgagtttgaatagtcggtttatctcctttggcggacacttggtacttctaaaatctgtcttgac |
12378249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 46626813 - 46626675
Alignment:
| Q |
297 |
ctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcgg |
396 |
Q |
| |
|
||||||| ||||||| || ||| ||| |||||| | ||||||||| |||||||| |||||||||||||| ||||||||||||| ||||| || || || |
|
|
| T |
46626813 |
ctattgggggtaatccgcatcgtcatagtttttgggatcctattgtgcatcgaattaaagctagacttacgggttggaatagccggtttctttcctttgg |
46626714 |
T |
|
| Q |
397 |
tggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|| |||||||| || |||||||||||||||| ||||| |
|
|
| T |
46626713 |
aggacgtttggttctgttaaaatctgtcttgacttctct |
46626675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 13441011 - 13440909
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || |||||||||| ||||| || ||||| || || |||| |||||||||||||| |
|
|
| T |
13441011 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttgtggtggtcgcttggttctactcaaatatgtcttgacctctc |
13440912 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
13440911 |
tgc |
13440909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 437
Target Start/End: Complemental strand, 45993495 - 45993427
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||||||||| || || |||||||| ||||| |||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
45993495 |
gttggaatagtcgtttcctctcttttggtggtcgtttggttcttctcaaatctgtgttgacctctctgc |
45993427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 435
Target Start/End: Original strand, 36227329 - 36227438
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtct |
425 |
Q |
| |
|
|||||| |||||||||||||||| ||| | ||||||| || ||||||||||| |||||||| ||||||||||| ||| | ||||| ||| | || | |
|
|
| T |
36227329 |
ttttgggaccctattgtgaatcgcattaagtctagactgtcgggttggaatagcaagtttctctcgttcggtggccgcttgatccttcttaaagcagttt |
36227428 |
T |
|
| Q |
426 |
tgacctctct |
435 |
Q |
| |
|
|||| ||||| |
|
|
| T |
36227429 |
tgacttctct |
36227438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 7662412 - 7662595
Alignment:
| Q |
252 |
tgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaat |
351 |
Q |
| |
|
|||| ||||||||||| ||| ||| |||| | ||||| ||||| |||||||| ||||||| ||| ||| |||| |||||| | ||||||||||||||||| |
|
|
| T |
7662412 |
tgagctgtaaagtgggtaaggttccttttatgtacttgggcttgcctattgggggtaatccgcgtcgtcttagtttttgggatcctattgtgaatcgaat |
7662511 |
T |
|
| Q |
352 |
tcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
| |||||||||||| | ||||||||||||| ||||| || || || || |||||||| || |||||||||||||||| ||||| |
|
|
| T |
7662512 |
taaagctagacttatgggttggaatagccggtttctttcctttggaggacgtttggttctgttaaaatctgtcttgacttctct |
7662595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 23872664 - 23872766
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || ||||||||||| ||||| || ||||| || || ||||||||||||||||||| |
|
|
| T |
23872664 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc |
23872763 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
23872764 |
tgc |
23872766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 390
Target Start/End: Complemental strand, 23279840 - 23279701
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaa |
350 |
Q |
| |
|
|||||||| |||||||| ||| ||| ||| | ||||| ||||| |||||| | ||||||| || ||| |||| |||| |||||||| ||||||||| |
|
|
| T |
23279840 |
ttgagttgcaaagtgggtaaggttcctttcctgtacttgggcttgcctattaggggtaatccacgtcgtcttagtttttatgaccctattttgaatcgaa |
23279741 |
T |
|
| Q |
351 |
ttcaagctagacttacgagttggaatagccgatttctctc |
390 |
Q |
| |
|
|| || ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
23279740 |
ttaaaactagacttacgagttggaataaccggtttctctc |
23279701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 55299574 - 55299472
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||| | || |||||||||| || ||||||||||| ||||| || ||||| || || ||||||||||||||||||| |
|
|
| T |
55299574 |
cctattgtgaatcgtattaaatctagattgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc |
55299475 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
55299474 |
tgc |
55299472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 3129190 - 3129265
Alignment:
| Q |
362 |
cttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||||| |||||||| |||||||||| || || || || |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
3129190 |
cttacgggttggaattgccgatttctttcctttggaggtcgtttggtacttttaaaatctgtcttgacttctctgc |
3129265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 20675988 - 20675886
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||| ||||| || ||| ||||||| ||||| || ||||| || || ||||||||||||||||||| |
|
|
| T |
20675988 |
cctattgtgaatcgtattaaatctagactgtcgggttgtaatagtcggtttttctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc |
20675889 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
20675888 |
tgc |
20675886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 19115389 - 19115288
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| || ||||| |||| || |||||||||| || || |||||||| |||||||| ||||| ||||| ||| |||||||||| |||| |
|
|
| T |
19115389 |
cctattgtgaatcgtgttaaagctcgactgtcgggttggaatagtcgtttcctctcttttggtggccgcttggttcttctcaaagctgtcttgacttctc |
19115290 |
T |
|
| Q |
435 |
tg |
436 |
Q |
| |
|
|| |
|
|
| T |
19115289 |
tg |
19115288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 8935993 - 8935926
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctg |
436 |
Q |
| |
|
|||||||||| || || |||||||| ||| |||||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
8935993 |
gttggaatagtcgtttcctctcttttggttgccgtttggttcttctcaaatctgtgttgacctctctg |
8935926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 435
Target Start/End: Complemental strand, 19648614 - 19648548
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|||||||||| || || |||||||| | |||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
19648614 |
gttggaatagtcgtttcctctcttttgctggccgtttggttcttctcaaatctgtgttgacctctct |
19648548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 437
Target Start/End: Original strand, 29552979 - 29553090
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtct |
425 |
Q |
| |
|
|||||| | |||||||||||||| ||| | ||||||| || |||||||||| | || || ||||| ||||| |||||||| ||||| ||| |||||| |
|
|
| T |
29552979 |
ttttgggatcctattgtgaatcgtattagaactagactgtcgggttggaatagttgtttcctttcttttggtggtcgtttggttcttctcaaagctgtct |
29553078 |
T |
|
| Q |
426 |
tgacctctctgc |
437 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
29553079 |
tgacttctctgc |
29553090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 26694875 - 26694814
Alignment:
| Q |
341 |
gtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccg |
402 |
Q |
| |
|
|||||||| ||| || ||||||| ||| |||||||||| ||||||||||||| |||||||| |
|
|
| T |
26694875 |
gtgaatcgcattaaatctagactgacgggttggaatagtagatttctctcttttggtggccg |
26694814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 251 - 435
Target Start/End: Original strand, 30166426 - 30166610
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaa |
350 |
Q |
| |
|
||||| ||||||||||| ||| ||| |||| | ||||| ||||| |||||||| || |||| ||| ||| |||| |||||| | |||||||||||||||| |
|
|
| T |
30166426 |
ttgagctgtaaagtgggtaaggttccttttatgtacttgggcttgcctattgggggaaatccgcgtcgtcttagtttttgggatcctattgtgaatcgaa |
30166525 |
T |
|
| Q |
351 |
ttcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|| |||||||||||| | ||||||||||||| ||||| || || || || |||||||| || |||||||||||||||| ||||| |
|
|
| T |
30166526 |
ttaaagctagacttatgggttggaatagccggtttctttcctttggaggacgtttggttctgttaaaatctgtcttgacttctct |
30166610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 6175664 - 6175766
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
||||||||||||| ||| || ||||||| || |||||||||| || ||||||||||| ||||| || ||||| || || |||||||||||||| |||| |
|
|
| T |
6175664 |
cctattgtgaatcatattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacatctc |
6175763 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
6175764 |
tgc |
6175766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 402
Target Start/End: Original strand, 42674539 - 42674692
Alignment:
| Q |
249 |
ttttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcg |
348 |
Q |
| |
|
||||||||||||||||||| | |||| |||| | ||| ||||| | ||||| || ||||||| |||| | || |||||| | || || |||||||| |
|
|
| T |
42674539 |
ttttgagttgtaaagtgggtagaattccttttttgtacctaggcctgcctataggtggtaatccgcggagacttcagttttgggaaccgatcgtgaatcg |
42674638 |
T |
|
| Q |
349 |
aattcaagctagacttacgagttggaatagccgatttctctctttcggtggccg |
402 |
Q |
| |
|
||| || ||||||| |||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
42674639 |
cattaaatctagactgacgagttggaatagtagatttctctcttttggtggccg |
42674692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 406
Target Start/End: Complemental strand, 36709946 - 36709791
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaa |
350 |
Q |
| |
|
|||||||||||||||| || |||| |||| | ||| ||||| | || || || ||||||| |||| | ||| |||||| | || || |||||||| | |
|
|
| T |
36709946 |
ttgagttgtaaagtggaaaaaattccttttatgtacctaggcctgccaataggtggtaatccgcggagatttcagttttgggaaccaatcgtgaatcgca |
36709847 |
T |
|
| Q |
351 |
ttcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttg |
406 |
Q |
| |
|
|| || ||||||| || |||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
36709846 |
ttaaatctagactgtcgggttggaatagtagatttctttctttcggtggccgtttg |
36709791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 437
Target Start/End: Original strand, 133981 - 134134
Alignment:
| Q |
284 |
tacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgat |
383 |
Q |
| |
|
||||| |||||||||||||| ||||||| || || |||| |||||| ||||||||||| ||||||| || ||||||||||| ||||||||||||| | |
|
|
| T |
133981 |
tacttgggcttacctattgggggtaatccacgtcggcttagtttttgggaccctattgtgcatcgaataaaatctagacttacgggttggaatagccggt |
134080 |
T |
|
| Q |
384 |
ttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||| || || ||||| || ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
134081 |
ttctttcctttggtggacggttggtacttttaaaatctgtcttgacttctctgc |
134134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 437
Target Start/End: Original strand, 311809 - 311962
Alignment:
| Q |
284 |
tacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgat |
383 |
Q |
| |
|
||||| |||||||||||||| ||||||| || || |||| |||||| ||||||||||| ||||||| || ||||||||||| ||||||||||||| | |
|
|
| T |
311809 |
tacttgggcttacctattgggggtaatccacgtcggcttagtttttgggaccctattgtgcatcgaataaaatctagacttacgggttggaatagccggt |
311908 |
T |
|
| Q |
384 |
ttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||| || || ||||| || ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
311909 |
ttctttcctttggtggacggttggtacttttaaaatctgtcttgacttctctgc |
311962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 8596 - 8457
Alignment:
| Q |
296 |
cctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcg |
395 |
Q |
| |
|
|||||||| ||||||| ||| ||| |||| |||||| | |||||||||||||||||| |||||||||||| | ||||||||||||| ||||| || || | |
|
|
| T |
8596 |
cctattgggggtaatccgcgtcgtcttagtttttgggatcctattgtgaatcgaattaaagctagacttatgggttggaatagccggtttctttcctttg |
8497 |
T |
|
| Q |
396 |
gtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
| || |||||||| || |||||||||||||||| ||||| |
|
|
| T |
8496 |
gaggacgtttggttctgttaaaatctgtcttgacttctct |
8457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 45422512 - 45422373
Alignment:
| Q |
296 |
cctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcg |
395 |
Q |
| |
|
|||||||| ||||||| ||| ||| |||| |||||| | |||||||||||||| ||| |||||||||||| | ||||||||||||| ||||| || || | |
|
|
| T |
45422512 |
cctattgggggtaatccgcgtcgtcttagtttttgggatcctattgtgaatcgtattaaagctagacttatgggttggaatagccggtttctttcctttg |
45422413 |
T |
|
| Q |
396 |
gtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
| || |||||||| || |||||||||||||||| ||||| |
|
|
| T |
45422412 |
gaggacgtttggttctattaaaatctgtcttgacttctct |
45422373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 13551535 - 13551437
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctct |
433 |
Q |
| |
|
|||||||||||||| ||| || ||||||| | |||||||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||| |||||||| |
|
|
| T |
13551535 |
cctattgtgaatcgtattaaatctagactgtcaggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctct |
13551437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 8065482 - 8065519
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttg |
406 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8065482 |
gttggaatagcagatttctctctttcggtggccgtttg |
8065519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 25380571 - 25380675
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctc-tttcggtggccgtttggtacttctaaaatctgtc |
424 |
Q |
| |
|
|||||| | |||||||||||||| ||| || ||||||| | ||||||| ||| || |||||||| ||| || ||||| ||||| ||||| ||||||||| |
|
|
| T |
25380571 |
ttttgggaacctattgtgaatcgtattaaatctagactgtcaagttggattagtcgttttctctctttttggcggccgcttggttcttctcaaatctgtc |
25380670 |
T |
|
| Q |
425 |
ttgac |
429 |
Q |
| |
|
||||| |
|
|
| T |
25380671 |
ttgac |
25380675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 437
Target Start/End: Original strand, 3649 - 3837
Alignment:
| Q |
249 |
ttttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcg |
348 |
Q |
| |
|
|||||||||| |||||||| ||| ||| ||| | ||||| ||||| || ||||| ||||| | ||| || |||| |||||| ||| ||||||| |||| |
|
|
| T |
3649 |
ttttgagttgcaaagtgggtaaggttcctttcttgtacttgggcttgccaattgggggtaacccgcgtcggcttagtttttgggaccatattgtgcatcg |
3748 |
T |
|
| Q |
349 |
aattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
||| || ||||||||||| ||||||||||| | ||||| || || || || | |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
3749 |
aatcaaatctagacttacgggttggaatagctggtttctttcctttggcggacatttggtacttttaaaatctgtcttgacttctctgc |
3837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 7453319 - 7453205
Alignment:
| Q |
321 |
ttagcttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatc |
420 |
Q |
| |
|
|||| |||||| | ||||||||||||||| || |||||||||||||| ||||||||||||| ||||| || || || || ||| |||| ||| ||||||| |
|
|
| T |
7453319 |
ttagtttttgggatcctattgtgaatcgagttaaagctagacttacgggttggaatagccggtttctttcctttggaggacgtctggttcttttaaaatc |
7453220 |
T |
|
| Q |
421 |
tgtcttgacctctct |
435 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
7453219 |
tgtcttgacttctct |
7453205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 420
Target Start/End: Complemental strand, 23943124 - 23942955
Alignment:
| Q |
251 |
ttgagttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgt-tttagcttttggaaccctattgtgaatcga |
349 |
Q |
| |
|
||||||||||||||||| || ||||||||| | ||| ||||| | ||||| || ||||||| |||| || ||||| ||| |||||| || ||||||||| |
|
|
| T |
23943124 |
ttgagttgtaaagtgggaaaaattcattttatgtacctaggcctgcctatcggtggtaatccgcggagtctttagttttgggaacca-atcgtgaatcga |
23943026 |
T |
|
| Q |
350 |
attcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatc |
420 |
Q |
| |
|
||| || ||||| | || ||||||||||| |||||||||||||||||||||| ||| | ||||| ||||| |
|
|
| T |
23943025 |
attaaatctagattgtcgggttggaatagcagatttctctctttcggtggccgcttgatccttctcaaatc |
23942955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 406
Target Start/End: Original strand, 43612363 - 43612443
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttg |
406 |
Q |
| |
|
||||||||||||||||||||||| ||| || ||||| | || ||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
43612363 |
ttttggaaccctattgtgaatcgcattaaatctagattgtcgggttggaatagcaggtttctatctttcggtggccgtttg |
43612443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 16375324 - 16375392
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||||||||| || ||||||||||| ||||| || ||||| || || |||||||||||||||||||||| |
|
|
| T |
16375324 |
gttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgc |
16375392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 4987286 - 4987352
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|||||||||| || || || ||||| |||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4987286 |
gttggaatagtcgtttcctttcttttggtggccgtttggttcttctcaaatctgtgttgacctctct |
4987352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 12332741 - 12332701
Alignment:
| Q |
395 |
ggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
12332741 |
ggtggccgtttggttcttctaaagtctgtcttgacctctct |
12332701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 43611369 - 43611445
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccg |
402 |
Q |
| |
|
|||||| ||||||||||||||| ||| || ||||||| || ||||||||||| | ||||| |||||||||||||| |
|
|
| T |
43611369 |
ttttgggaccctattgtgaatcacattaaatctagactatcgggttggaatagcaggtttctatctttcggtggccg |
43611445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 48072613 - 48072715
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || ||||||||||| ||||| || ||||| || || ||||||||||||||||||| |
|
|
| T |
48072613 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc |
48072712 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
48072713 |
tgc |
48072715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 32352499 - 32352601
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||| | ||| || ||||||| || |||||||||| || ||||||||||| ||||| || ||||| || || ||||||||||||||||||| |
|
|
| T |
32352499 |
cctattgtgaattgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc |
32352598 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
32352599 |
tgc |
32352601 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 5498039 - 5497941
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctct |
433 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||| |||||||| |
|
|
| T |
5498039 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctct |
5497941 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 25504213 - 25504279
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctct |
435 |
Q |
| |
|
|||||||||| || || |||||||| |||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
25504213 |
gttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctct |
25504279 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 20796694 - 20796540
Alignment:
| Q |
254 |
agttgtaaagtggggaagattcattttgtttacttaggcttacctattggcggtaatctgcggcgttttagcttttggaaccctattgtgaatcgaattc |
353 |
Q |
| |
|
|||||||||||||| ||||||| ||| | ||| | || |||||||| || ||||||| | | ||| || |||||| ||||| |||||||| ||||| |
|
|
| T |
20796694 |
agttgtaaagtgggcaagattcctttcatgtaccttggtttacctatagggggtaatccgtgtcgtctttcattttgggaccctgttgtgaatagaatta |
20796595 |
T |
|
| Q |
354 |
aagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggt |
408 |
Q |
| |
|
|| ||||| | | |||||||||| ||||||||||| |||||||| || ||||| |
|
|
| T |
20796594 |
aatctagattgtcaggttggaatagtcgatttctctcgttcggtggtcgcttggt |
20796540 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 437
Target Start/End: Complemental strand, 15674785 - 15674683
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctc |
434 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || ||||||||||| ||||| || | ||| || || ||||||||||||||||||| |
|
|
| T |
15674785 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagacggtttctctcttttggtggtcgctgggttctactcaaatctgtcttgacctctc |
15674686 |
T |
|
| Q |
435 |
tgc |
437 |
Q |
| |
|
||| |
|
|
| T |
15674685 |
tgc |
15674683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 437
Target Start/End: Complemental strand, 33640836 - 33640768
Alignment:
| Q |
369 |
gttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctctctgc |
437 |
Q |
| |
|
|||||||||| || || |||||||| |||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
33640836 |
gttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctctgc |
33640768 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 26206286 - 26206188
Alignment:
| Q |
335 |
cctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtcttgacctct |
433 |
Q |
| |
|
|||||||||||||| ||| || ||||||| || |||||||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||| |||||||| |
|
|
| T |
26206286 |
cctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctct |
26206188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 11469529 - 11469420
Alignment:
| Q |
326 |
ttttggaaccctattgtgaatcgaattcaagctagacttacgagttggaatagccgatttctctctttcggtggccgtttggtacttctaaaatctgtct |
425 |
Q |
| |
|
|||||| |||| ||||||||||||||| || ||||||| || | |||||||||| |||||||| || |||||| | ||| | ||||||||||| ||| |
|
|
| T |
11469529 |
ttttgggacccgattgtgaatcgaattaaatctagactgtcggggtggaatagcctgtttctctcatttggtggctgcttgattcttctaaaatcagtcc |
11469430 |
T |
|
| Q |
426 |
tgacctctct |
435 |
Q |
| |
|
|||| ||||| |
|
|
| T |
11469429 |
tgacttctct |
11469420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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