View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21193_low_54 (Length: 227)

Name: NF21193_low_54
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21193_low_54
NF21193_low_54
[»] chr6 (56 HSPs)
chr6 (1-221)||(28139562-28139782)
chr6 (2-184)||(26646501-26646683)
chr6 (2-184)||(26752469-26752651)
chr6 (2-182)||(26656011-26656191)
chr6 (2-182)||(26761982-26762162)
chr6 (19-170)||(27593017-27593168)
chr6 (19-161)||(27678985-27679127)
chr6 (2-151)||(27611018-27611167)
chr6 (2-151)||(27718395-27718544)
chr6 (2-182)||(27338050-27338230)
chr6 (2-182)||(27398790-27398970)
chr6 (2-151)||(27724861-27725010)
chr6 (19-161)||(27677620-27677762)
chr6 (19-128)||(27706441-27706550)
chr6 (2-182)||(25579741-25579921)
chr6 (19-168)||(28242843-28242992)
chr6 (25-185)||(26623021-26623181)
chr6 (25-185)||(26728999-26729159)
chr6 (19-182)||(26055965-26056128)
chr6 (19-182)||(26075935-26076098)
chr6 (19-182)||(26823879-26824042)
chr6 (19-170)||(27604702-27604853)
chr6 (2-161)||(27698500-27698659)
chr6 (19-182)||(28181153-28181316)
chr6 (19-182)||(28185405-28185568)
chr6 (2-165)||(28781161-28781324)
chr6 (21-119)||(28226991-28227089)
chr6 (2-182)||(26142887-26143067)
chr6 (2-165)||(25481764-25481927)
chr6 (19-182)||(26048884-26049047)
chr6 (19-182)||(26070053-26070216)
chr6 (2-165)||(26802464-26802627)
chr6 (58-185)||(26937172-26937299)
chr6 (2-108)||(31284310-31284416)
chr6 (19-108)||(28234603-28234692)
chr6 (7-119)||(26341982-26342094)
chr6 (21-119)||(28297761-28297859)
chr6 (21-119)||(28514214-28514312)
chr6 (2-119)||(28325503-28325620)
chr6 (19-154)||(28149976-28150111)
chr6 (2-165)||(28786300-28786463)
chr6 (2-165)||(28792421-28792584)
chr6 (16-108)||(2184324-2184416)
chr6 (2-170)||(25538562-25538730)
chr6 (19-114)||(26861655-26861750)
chr6 (2-165)||(26884185-26884350)
chr6 (19-165)||(27531199-27531345)
chr6 (16-108)||(2184934-2185026)
chr6 (22-161)||(27427612-27427751)
chr6 (61-108)||(26848741-26848788)
chr6 (61-108)||(28098428-28098475)
chr6 (64-108)||(26635774-26635818)
chr6 (64-108)||(26741740-26741784)
chr6 (19-74)||(25507002-25507057)
chr6 (62-108)||(26975134-26975180)
chr6 (62-119)||(25071741-25071798)
[»] chr4 (7 HSPs)
chr4 (19-184)||(18679537-18679702)
chr4 (19-184)||(18731474-18731639)
chr4 (19-184)||(18699370-18699535)
chr4 (19-185)||(18655446-18655612)
chr4 (19-184)||(18724055-18724220)
chr4 (22-161)||(18073804-18073943)
chr4 (62-170)||(5090951-5091059)
[»] chr8 (1 HSPs)
chr8 (21-184)||(29273753-29273916)
[»] chr1 (3 HSPs)
chr1 (19-184)||(268327-268492)
chr1 (2-165)||(28127668-28127831)
chr1 (2-165)||(28164352-28164514)
[»] scaffold0349 (2 HSPs)
scaffold0349 (2-151)||(14372-14520)
scaffold0349 (2-161)||(3427-3587)
[»] scaffold0038 (4 HSPs)
scaffold0038 (19-182)||(34764-34927)
scaffold0038 (19-168)||(43005-43154)
scaffold0038 (21-119)||(27489-27587)
scaffold0038 (2-119)||(116818-116935)
[»] scaffold0277 (2 HSPs)
scaffold0277 (19-151)||(4687-4819)
scaffold0277 (2-165)||(13634-13797)
[»] scaffold0419 (1 HSPs)
scaffold0419 (2-165)||(7547-7710)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-117)||(58332-58430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-161)||(59612-59751)
[»] chr2 (1 HSPs)
chr2 (58-117)||(3279766-3279825)
[»] scaffold1254 (1 HSPs)
scaffold1254 (2-74)||(10-82)


Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28139562 - 28139782
Alignment:
Q  1 tcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28139562 tcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtcc 28139661  T
Q  101 acatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaaccaaatgttttggtga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28139662 acatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaaccgaatgttttggtga 28139761  T
Q  201 agcaatagctaagcaagaagt 221  Q
    |||||||||||||||||||||    
T  28139762 agcaatagctaagcaagaagt 28139782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 26646501 - 26646683
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||    
T  26646501 caccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtcca 26646600  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    ||||||| | |||| ||| ||||||||  || | |||||||| ||||||||||| ||||||||| |||| || || |||||||    
T  26646601 catcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaa 26646683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 26752469 - 26752651
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||    
T  26752469 caccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtcca 26752568  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    ||||||| | |||| ||| ||||||||  || | |||||||| ||||||||||| ||||||||| |||| || || |||||||    
T  26752569 catcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaa 26752651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 26656011 - 26656191
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||||| || |||||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  26656011 caccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 26656110  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| | ||||  || |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  26656111 catcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatca 26656191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 26761982 - 26762162
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||||| || |||||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  26761982 caccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 26762081  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| | ||||  || |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  26762082 catcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatca 26762162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 27593168 - 27593017
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||| | |||| ||    
T  27593168 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctaca 27593069  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctca 170  Q
    | ||||||||  |    |||||||||||||||| ||||||||||||||||||    
T  27593068 agacaaagggtcgccctgttttgcctgttttctttggtgtggatccttctca 27593017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 27678985 - 27679127
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  27678985 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 27679084  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    | ||||||||  |  | ||| |||||||||||| |||||||||    
T  27679085 agacaaagggtcgcctcgttctgcctgttttctttggtgtgga 27679127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 27611167 - 27611018
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  27611167 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtcca 27611068  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttct 151  Q
    ||| ||| |||||| ||| ||||||||  |  | ||||||||||||||||    
T  27611067 cataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27611018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 27718544 - 27718395
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  27718544 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtcca 27718445  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttct 151  Q
    ||| ||| |||||| ||| ||||||||  |  | ||||||||||||||||    
T  27718444 cataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27718395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 27338230 - 27338050
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||||||||| ||||||||||| || ||  | |||||    |||||||| |||||||  |||||||||||||||||||||||    
T  27338230 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27338131  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| |||||| ||| |||| ||| |||| ||||||||||||||||||||||| ||||||| ||||| | ||||||||    
T  27338130 catcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatca 27338050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 182
Target Start/End: Complemental strand, 27398970 - 27398790
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||||||||| ||||||||||| || ||  | |||||    |||||||| |||||||  |||||||||||||||||||||||    
T  27398970 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27398871  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| |||||| ||| |||| ||| |||| ||||||||||||||||||||||| ||||||| ||||| | ||||||||    
T  27398870 catcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatca 27398790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 27725010 - 27724861
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||||    
T  27725010 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtcca 27724911  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttct 151  Q
    ||| ||| |||||| ||| ||||||||  |  | ||||||||||||||||    
T  27724910 cataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 27724861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 27677762 - 27677620
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| ||  |||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  27677762 gccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 27677663  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    | ||||||||  |  | ||| |||||||||||| || ||||||    
T  27677662 agacaaagggtcgcctcgttctgcctgttttctttgctgtgga 27677620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 27706550 - 27706441
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| || ||||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  27706550 gccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 27706451  T
Q  119 acacaaaggg 128  Q
    | ||||||||    
T  27706450 agacaaaggg 27706441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 25579741 - 25579921
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||||||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  25579741 caccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 25579840  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| |||||| ||| |||||| | || || || ||||| |||||||||| |||||| ||| ||||||| ||||||||    
T  25579841 catcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatca 25579921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 28242843 - 28242992
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||| ||    
T  28242843 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgca 28242942  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttct 168  Q
    | | ||| ||| |  | ||||||||  ||||||||| |||||| ||||||    
T  28242943 agaaaaatggacgcctagttttgccaattttctatgatgtggaaccttct 28242992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 26623021 - 26623181
Alignment:
Q  25 gaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaacacaa 124  Q
    ||||| ||||||||||| || |||||||||||   ||||||||| | |||||  ||||| ||||| |||||||||||||||||| |||||| ||| ||||    
T  26623021 gaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaa 26623120  T
Q  125 agggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaac 185  Q
    ||||  || | |||||||| || |||||||| ||||||||| ||||||| || ||||||||    
T  26623121 agggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaac 26623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 26728999 - 26729159
Alignment:
Q  25 gaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaacacaa 124  Q
    ||||| ||||||||||| || |||||||||||   ||||||||| | |||||  ||||| ||||| |||||||||||||||||| |||||| ||| ||||    
T  26728999 gaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaa 26729098  T
Q  125 agggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaac 185  Q
    ||||  || | |||||||| || |||||||| ||||||||| ||||||| || ||||||||    
T  26729099 agggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaac 26729159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26055965 - 26056128
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||| ||||||||| ||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  26055965 gccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26056064  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |||||||| | || || || ||||| |||||||||| |||||| ||| ||||||| ||||||||    
T  26056065 acacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatca 26056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26075935 - 26076098
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||| ||||||||| ||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  26075935 gccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26076034  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |||||||| | || || || ||||| |||||||||| |||||| ||| ||||||| ||||||||    
T  26076035 acacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatca 26076098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26823879 - 26824042
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| || |||||||||||   |||||||||||||||||  ||||| ||||||||||||||||||||||||  |  || ||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctaca 26823978  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |   ||||||  |  | ||||||||||||||||||||||||||||||  | |||| ||||||||    
T  26823979 aggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctggtgacatacgacatca 26824042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 27604853 - 27604702
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    |||||||| ||||| |||||||| || ||||||||||| ||||| |||||||||||||  ||||| ||||| |||||||| ||||||||| | |||| ||    
T  27604853 gccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctaca 27604754  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctca 170  Q
      ||||||||  |  | |||||||||||||||| ||||||||| ||||||||    
T  27604753 cgacaaagggtcgcgtcgttttgcctgttttctttggtgtggaaccttctca 27604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 27698659 - 27698500
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || |||||||| |||||||||||||| || |||||||||||  |||||||||| |||||||  ||||| |||||||||||||||||    
T  27698659 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtcca 27698560  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    ||| ||| |||||| | | ||||||||  |  | ||||||||||||||||  ||||||||    
T  27698559 cataattcactgctacgagacaaagggtcgcctcgttttgcctgttttcttcggtgtgga 27698500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 28181153 - 28181316
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||||||||| || || || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||    
T  28181153 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttca 28181252  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |   ||  ||  || | ||||||||  ||||||||| |||||| ||||||||| | ||||||||    
T  28181253 aggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 28181316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 28185405 - 28185568
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||||||||| || || || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||    
T  28185405 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttca 28185504  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |   ||  ||  || | ||||||||  ||||||||| |||||| ||||||||| | ||||||||    
T  28185505 aggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 28185568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 28781161 - 28781324
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||    |||||||||||||||||||| ||    
T  28781161 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttca 28781260  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | |||| ||| ||||| ||  |  | |||||||||||||||| |||||||||||||    
T  28781261 cattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcct 28781324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 28226991 - 28227089
Alignment:
Q  21 cattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaa 119  Q
    |||||||||||||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| | ||||||||    
T  28226991 cattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaa 28227089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 182
Target Start/End: Original strand, 26142887 - 26143067
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||||||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  26142887 caccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 26142986  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    ||||||| |||||| ||| |||||| | || || || || || |||||||||| |||||| ||| ||||||| ||| ||||    
T  26142987 catcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatca 26143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 25481764 - 25481927
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||||||||||||||||||||  || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  25481764 caccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 25481863  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||||||| |||||| ||| |||||| | || || || || || |||||||||||||||||||||    
T  25481864 catcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcct 25481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26048884 - 26049047
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||| ||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  26048884 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26048983  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    | |||||| | || || || ||||| ||||| |||| |||||| ||| ||||||| ||||||||    
T  26048984 agacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26049047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 26070053 - 26070216
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||| ||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  26070053 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26070152  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    | |||||| | || || || ||||| ||||| |||| |||||| ||| ||||||| ||||||||    
T  26070153 agacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 26802464 - 26802627
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||    |||||||||||||||||||| ||    
T  26802464 caccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttca 26802563  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | ||||  || ||||||||  |  | || |||||| |||||| |||||||||||||    
T  26802564 cattattcattgctataagacaaagggtcgcctcgtcttgcctattttctttggtgtggatcct 26802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 26937172 - 26937299
Alignment:
Q  58 atcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtg 157  Q
    |||||||||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||||| ||||| ||   | |  |||||||| |||||||||  |    
T  26937172 atcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaag 26937271  T
Q  158 tggatccttctcacattcgacatcaaac 185  Q
    |||||||||||||| ||||||| |||||    
T  26937272 tggatccttctcacgttcgacaccaaac 26937299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 31284310 - 31284416
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||||  || ||||||||||| ||||||||||| ||||| ||||||||   ||||||||||||||| | |||||| |||||||||||||||||    
T  31284310 caccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtcca 31284409  T
Q  102 catcatt 108  Q
    |||||||    
T  31284410 catcatt 31284416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 28234603 - 28234692
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  ||||||||||||||||||||||||||||||    
T  28234603 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 26342094 - 26341982
Alignment:
Q  7 tcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatca 106  Q
    ||||| || |||||||||||||| || ||||||||||| ||  | || || ||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  26342094 tcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatca 26341995  T
Q  107 ttgactgcttcaa 119  Q
    || | ||||||||    
T  26341994 ttcattgcttcaa 26341982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 28297859 - 28297761
Alignment:
Q  21 cattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaa 119  Q
    |||||||||  ||||||||||||| ||||| || || | ||| ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  28297859 cattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaa 28297761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 28514214 - 28514312
Alignment:
Q  21 cattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaa 119  Q
    |||||||||  ||||||||||||| ||||| || || | ||| ||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  28514214 cattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaa 28514312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 28325503 - 28325620
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    ||||||||||  | || ||||||||||| |||||||||||||| ||| | || || ||||| ||||| |||||||  ||||||||||| |||||||||||    
T  28325503 caccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtcca 28325602  T
Q  102 catcattgactgcttcaa 119  Q
    ||| ||| ||||||||||    
T  28325603 cattattcactgcttcaa 28325620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 28149976 - 28150111
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| || ||||||||||| ||  | || || ||||||||| | |||||||  ||||| |||||||||||||||||||| ||| |||||||||    
T  28149976 gccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttca 28150075  T
Q  119 acacaaagggatgtttggttttgcctgttttctatg 154  Q
    |  ||||||| || || ||| ||||| |||||||||    
T  28150076 aggcaaagggttgcttagttctgcctattttctatg 28150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 28786300 - 28786463
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| | ||    |||||||||||||||||||| ||    
T  28786300 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttca 28786399  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | |||| ||| ||||| ||  |  | |||||||||||||||| |||||| ||||||    
T  28786400 cattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcct 28786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 28792421 - 28792584
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| | ||    |||||||||||||||||||| ||    
T  28792421 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttca 28792520  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | |||| ||| ||||| ||  |  | |||||||||||||||| |||||| ||||||    
T  28792521 cattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcct 28792584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 2184324 - 2184416
Alignment:
Q  16 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    |||||||||||||| || || |||||||||||||| || || |  |||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  2184324 aaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaacttgtccacatcatt 2184416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 25538562 - 25538730
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| ||||| || || ||||| ||||||||||| ||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  25538562 caccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 25538661  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctca 170  Q
     |||||| |||||| ||| |||||| | || || || ||||| |||||||||| |||||| ||| ||||    
T  25538662 gatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 25538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 26861655 - 26861750
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgc 114  Q
    ||||||||||| ||||| |||||||| |||||||||||   ||||||||||||||| |  ||||| ||||| ||||||||||| |||||| |||||    
T  26861655 gccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactgc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 26884185 - 26884350
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||||||||||||||| ||||| || ||  | ||||| | ||||||||| |||||||  ||||| |||||||||||||||||    
T  26884185 caccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtcca 26884284  T
Q  102 ca--tcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||  ||||| |||||| | | ||||||||  |  | ||||||||||||||   |||||||||||||    
T  26884285 catgtcattcactgctacgagacaaagggtcgcctcgttttgcctgtttttgttggtgtggatcct 26884350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 27531345 - 27531199
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||| ||||||||||||| || || || |||||    |||||||| |||||||  ||||| |||||||||||||| ||||||| | | |||| |     
T  27531345 gccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacg 27531246  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    | |||||||| ||| | ||||||||||||||   |||||||||||||    
T  27531245 atacaaagggttgtcttgttttgcctgtttttattggtgtggatcct 27531199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 2184934 - 2185026
Alignment:
Q  16 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||||||||||||||| || |||||||||||||| || || |   ||||||| |||||||  ||||| ||||||||||||||||| ||||||    
T  2184934 aaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcattttgtttggacgaacttgtccatatcatt 2185026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 27427751 - 27427612
Alignment:
Q  22 attgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaaca 121  Q
    ||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  | ||| ||||||  |||||||||||||||| |||||| ||| |    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 27427652  T
Q  122 caaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    | ||||| ||  | |||||||||||||||| |||||||||    
T  27427651 ccaagggttgcctcgttttgcctgttttctttggtgtgga 27427612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 26848741 - 26848788
Alignment:
Q  61 aactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcatt 26848788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 28098475 - 28098428
Alignment:
Q  61 aactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  28098475 aactatgcttcttctttgttttgtttggatgaacttgtccacatcatt 28098428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 26635774 - 26635818
Alignment:
Q  64 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26635774 tatgcttcttctttgttttgtttggatgaacttgtccacatcatt 26635818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 26741740 - 26741784
Alignment:
Q  64 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26741740 tatgcttcttctttgttttgtttggatgaacttgtccacatcatt 26741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25507057 - 25507002
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 74  Q
    ||||||||||||||||||||||| || || ||  |||| |||||||||||||||||    
T  25507057 gccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 26975134 - 26975180
Alignment:
Q  62 actatgcctcttctttgttttgcttggacgaacttgtccacatcatt 108  Q
    ||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcatt 26975180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 25071741 - 25071798
Alignment:
Q  62 actatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaa 119  Q
    ||||||| |||||||  ||||| || ||||||||||||||||||||| ||| ||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaa 25071798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 18679702 - 18679537
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  18679702 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 18679603  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    | ||||||||  || | |||||||||||||||||||  ||||||||| |||||||  |||||||||    
T  18679602 agacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatgacatcaaa 18679537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 18731639 - 18731474
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||  |||||| ||    
T  18731639 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctaca 18731540  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    | ||||||||  || | |||||||||||||||||||| |||||||||  |||||| ||||||||||    
T  18731539 agacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaa 18731474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 18699535 - 18699370
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||| ||    
T  18699535 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctaca 18699436  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    | ||||| ||  || | |||||||||||||||||||| || |||||| ||||||| ||||||||||    
T  18699435 agacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacgacatcaaa 18699370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 18655612 - 18655446
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    |||||| |||| |||||||| || || ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||| ||||||| |||||| ||    
T  18655612 gccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctaca 18655513  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaac 185  Q
    | ||||||||  || | ||||| |||||||||||||| ||||||||| ||||||| |||||||||||    
T  18655512 agacaaagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacgacatcaaac 18655446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 18724220 - 18724055
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||||| ||| |||||||||||||||||||  |||||| ||    
T  18724220 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctaca 18724121  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    | ||||||||  || | |||||||||||||||||||| |||||||||  |||||| ||||| ||||    
T  18724120 agacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaa 18724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 18073804 - 18073943
Alignment:
Q  22 attgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaaca 121  Q
    ||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  | ||| ||||||  |||||||||||||||| |||||| ||| |    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 18073903  T
Q  122 caaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    | ||||| ||  | |||||||||||||||| |||||||||    
T  18073904 ccaagggttgcctcgttttgcctgttttctttggtgtgga 18073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 5091059 - 5090951
Alignment:
Q  62 actatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    ||||||| ||||||| |||||| || || ||||||||||| || ||| |||||| |||   ||| || ||  ||||||||||| ||||||||||||||||    
T  5091059 actatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T
Q  162 tccttctca 170  Q
     ||||||||    
T  5090959 accttctca 5090951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 29273916 - 29273753
Alignment:
Q  21 cattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaac 120  Q
    ||||||||| ||||| ||||| || ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||     
T  29273916 cattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 29273817  T
Q  121 acaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    ||||||||  || |  |||||||||| |||||||| ||||||||| ||||||| ||||||||||    
T  29273816 acaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacgacatcaaa 29273753  T

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Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 268492 - 268327
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||    
T  268492 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 268393  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 184  Q
    | | ||||||  || |  ||||||| || |||||||| ||||||||| ||||||| ||||||||||    
T  268392 agaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaa 268327  T

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Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 28127831 - 28127668
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    ||||||||||  |||| ||||||||||||||||| ||||| || ||||| ||||| | |||||||||||||||||  ||||| |||||||||||||| ||    
T  28127831 caccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgca 28127732  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||||||| |||||| ||| ||||||||  |  | |||||||||||||||| ||| |||||||||    
T  28127731 catcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcct 28127668  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 28164514 - 28164352
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||||||| || | || ||||||||| ||||| | ||||| || |||||||| || |||||||||||||||||||  ||||| |||||||||||||||||    
T  28164514 caccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtcca 28164415  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||||||| |||||| ||| ||||||||  |  | |||||||||||||||| ||| |||||||||    
T  28164414 catcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatcct 28164352  T

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Target: scaffold0349 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 14520 - 14372
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||||    
T  14520 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtcca 14422  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttct 151  Q
    ||| ||| |||||| ||| ||||||||  |  | ||||||||||||||||    
T  14421 cataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct 14372  T

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Target: scaffold0349; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 3587 - 3427
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaac-tatgcctcttctttgttttgcttggacgaacttgtcc 100  Q
    |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| |||||| |||||||||||||  ||||| ||||||||||||||||    
T  3587 caccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtcc 3488  T
Q  101 acatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    |||||||| |||||| ||| ||||||||  |  | ||| |||||||||| | |||||||||    
T  3487 acatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtgga 3427  T

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Target: scaffold0038 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 34764 - 34927
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||||||    
T  34764 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttca 34863  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 182  Q
    |   ||  ||  || | ||||||||  ||||||||| |||||| ||||||||| | ||||||||    
T  34864 aggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 34927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 43005 - 43154
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| |||||| ||    
T  43005 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgca 43104  T
Q  119 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttct 168  Q
    | | ||| ||| |  | ||||||||  ||||||||| |||||| ||||||    
T  43105 agaaaaatggacgcctagttttgccaattttctatgatgtggaaccttct 43154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 27489 - 27587
Alignment:
Q  21 cattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaa 119  Q
    |||||||||||||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||||||||||||| | ||||||||    
T  27489 cattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaa 27587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 116818 - 116935
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    ||||||||||  | || ||||||||||| |||||||||||||| ||| | || || ||||| ||||| |||||||  ||||||||||| |||||||||||    
T  116818 caccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtcca 116917  T
Q  102 catcattgactgcttcaa 119  Q
    ||| ||| ||||||||||    
T  116918 cattattcactgcttcaa 116935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 4819 - 4687
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttca 118  Q
    |||||||| |||||||||||||| || ||||||||||| |||  |||||||| ||||| |||||| |||||||||||||||||||| ||| |||||| ||    
T  4819 gccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctaca 4720  T
Q  119 acacaaagggatgtttggttttgcctgttttct 151  Q
    | ||||||||  |  | ||||||||||||||||    
T  4719 agacaaagggtcgcctcgttttgcctgttttct 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 13797 - 13634
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    |||||||||||||||||||| ||    
T  13797 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttca 13698  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | |||| ||| ||||| ||  |  | |||||||||||||||| |||||||||||||    
T  13697 cattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcct 13634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 7547 - 7710
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 101  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    |||||||||||||||||||| ||    
T  7547 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttca 7646  T
Q  102 catcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatcct 165  Q
    ||| ||| | |||| ||| ||| | ||  |  | |||||||||||||||| |||||||||||||    
T  7647 cattattcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatcct 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 58430 - 58332
Alignment:
Q  19 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttc 117  Q
    |||||| |||| |||||||||||||| || || || || ||||||||||| |||||||  ||||||||| |||||||||||||||||||| ||||||||    
T  58430 gccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgcttc 58332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 59612 - 59751
Alignment:
Q  22 attgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttcaaca 121  Q
    ||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  | ||| ||||||  |||||||||||||||| |||||| ||| |    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 59711  T
Q  122 caaagggatgtttggttttgcctgttttctatggtgtgga 161  Q
    | ||||| ||  | |||||||||||||||| |||||||||    
T  59712 ccaagggttgcctcgttttgcctgttttctttggtgtgga 59751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 3279766 - 3279825
Alignment:
Q  58 atcaactatgcctcttctttgttttgcttggacgaacttgtccacatcattgactgcttc 117  Q
    ||||||||||| |||||| | ||||| |||||||||||||||||||||||| | ||||||    
T  3279766 atcaactatgcttcttctatattttgtttggacgaacttgtccacatcattcattgcttc 3279825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 82 - 10
Alignment:
Q  2 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 74  Q
    |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    
T  82 caccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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