View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21193_low_55 (Length: 225)
Name: NF21193_low_55
Description: NF21193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21193_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 28862678 - 28862513
Alignment:
| Q |
18 |
aatttgatcgatcgcgtttgattttacacaattgtgtttgggattgggaggaagtgaggaatgagaaggaggaagggatgtaactcagtgtgtgactgac |
117 |
Q |
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| T |
28862678 |
aatttgatcaatcgcgtttgattttacacaattgtgtttgggattgggaggaagtgaggaatgagaaggaggaagggatgtaactcagtgtgtgactgac |
28862579 |
T |
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| Q |
118 |
cacgggcttatcgtagggttcactaatttctaattatcctattggttggttgactcatattaataa |
183 |
Q |
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| T |
28862578 |
cacgggcttatcgtagggttcactaatttctaattatcctattggttggttgactcatattaataa |
28862513 |
T |
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