View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21194_high_13 (Length: 319)
Name: NF21194_high_13
Description: NF21194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21194_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 27381128 - 27381297
Alignment:
| Q |
128 |
aaagcataaaataattgtgttttattgaatgcttcttttatgtcttgtggttagtgtcagagacagagagagtaaagtgaagcatttaaagcttctaaca |
227 |
Q |
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| T |
27381128 |
aaagcataaaataattgtgttttattgaatgcttcttttatgtcttgtggttagtgtcagagacagagagagtaaagtgaagcatttaaagcttctaaca |
27381227 |
T |
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| Q |
228 |
tcaaagacagagaaagagtgtgtttgtgtttatgtgccatgtgtttttctaacagaggaagagaaatttc |
297 |
Q |
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| T |
27381228 |
tcaaagacagagaaagagtgtgtttgtgtttatgtgccatgtgtttttctaacagaggaagagaaatttc |
27381297 |
T |
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Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 29009187 - 29009272
Alignment:
| Q |
18 |
aagagtttgttatgaattcagaacagagaatttggttatgtacctgcaaattcagaaagtgaaatctcagagcaatgaagaagaag |
103 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29009187 |
aagagtttgttatgaattcagaacagagaatgtggttatgtacctgcaaattcagaaagtgaaatctcagagcaatgaagaagaag |
29009272 |
T |
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