View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21194_high_20 (Length: 258)
Name: NF21194_high_20
Description: NF21194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21194_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 28201319 - 28201548
Alignment:
| Q |
10 |
aagaatatgagccaaaaattgtcatgataatgctaaaatgattagcatatgaaggccaacatagccaagctctgaaggataaatagtaacctaatatgcc |
109 |
Q |
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| T |
28201319 |
aagaaaatgagccaaaaattgtcatgataatgctaaaatgattagcatatgaaggccaacatatccaagctctgaaggataaatagtaacctaatatgcc |
28201418 |
T |
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| Q |
110 |
aaacaagcaaacttttgtggtcaaagggtgaacttggaatggggaaattgtgttattacctgcagtttgaacttgaaggaatcctaatagtgtgggaaat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28201419 |
aaacaagcaaacttttgtggtcaaagggtgaacttggaatggggaaattgtgttattacctgcagtttgaacttgaaggaatcctaatagtgtgggaaat |
28201518 |
T |
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| Q |
210 |
gtaaatgcatagattttatgccggtgggtt |
239 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
28201519 |
gtaaatgcatagattttatgccggtgggtt |
28201548 |
T |
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