View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21194_low_15 (Length: 305)
Name: NF21194_low_15
Description: NF21194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21194_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 44267922 - 44267649
Alignment:
| Q |
1 |
ttttgttttgttgcacacatttatctcttctaatctaattttaatttaaacatttataatgttctctttttgaacaatgttatgttatgcaggtggtaaa |
100 |
Q |
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| T |
44267922 |
ttttgttttgttgcacacatttatctcttctaatctaattttaatttaaacatttataatgttctctttttgaacaatgttatg-----caggtggtaaa |
44267828 |
T |
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| Q |
101 |
taaataaagaatgttacgtggatagtaataggattgaacatttgtccctgcttttctctggtaaattaattatttgtgttgtggtggtccatatttccct |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
44267827 |
taaa----gaatgttacgtggatagtaataggattgaacatttgtccctgcttttctctggtaaattaattatttgtgttttggtggtccatatttccct |
44267732 |
T |
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| Q |
201 |
t-ttttgtattgaatactttgtaagtttccagcacaattcccttctataaagattgccttgccggtgaaggtatatatagatagaaag |
287 |
Q |
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| T |
44267731 |
ttttttgtattgaatactttgtaagtttccagcacaattcccttctataaaga-----ttgccggtgaaggtatatatagatagaaag |
44267649 |
T |
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