View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21194_low_4 (Length: 464)

Name: NF21194_low_4
Description: NF21194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21194_low_4
NF21194_low_4
[»] chr3 (5 HSPs)
chr3 (37-328)||(13077371-13077662)
chr3 (23-325)||(54653381-54653681)
chr3 (23-328)||(47807227-47807529)
chr3 (23-326)||(51825025-51825327)
chr3 (163-290)||(43102857-43102984)
[»] chr7 (2 HSPs)
chr7 (23-328)||(19278744-19279047)
chr7 (68-127)||(23484618-23484677)
[»] chr1 (2 HSPs)
chr1 (23-328)||(3978725-3979026)
chr1 (37-128)||(22590014-22590105)
[»] chr2 (2 HSPs)
chr2 (23-290)||(42027594-42027861)
chr2 (37-128)||(30934968-30935059)
[»] chr5 (3 HSPs)
chr5 (25-321)||(10085265-10085561)
chr5 (83-328)||(1663885-1664134)
chr5 (176-328)||(27893375-27893524)
[»] chr4 (2 HSPs)
chr4 (33-241)||(26788927-26789136)
chr4 (23-209)||(3217138-3217324)
[»] chr8 (1 HSPs)
chr8 (86-128)||(42193494-42193536)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 37 - 328
Target Start/End: Complemental strand, 13077662 - 13077371
Alignment:
Q  37 tcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccggccaccacaaatctc 136  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13077662 tcttcctcttcaaaaagccaccaacttattattagattggtaagattttaaaaaccctaaccaccaccttctctcttactttccggccaccgcaaatctc 13077563  T
Q  137 cattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttcaccggcgaccaccgc 236  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  13077562 cattcaaaaaactaatatgattttattcttccccatcatgtctgcaacaaaacccatatatttattttgggatcggagaactttcaccggcgaccaccgc 13077463  T
Q  237 accgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaaccagaatcatacaattactcca 328  Q
    ||||| |||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13077462 accggaaaccgctgcaaccgtgtcggcgaccaacgcataatttctgcaaaaactcaaaacaatttattaaccagaagcatacaattactcca 13077371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 23 - 325
Target Start/End: Complemental strand, 54653681 - 54653381
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |    
T  54653681 ttgaactactctcatcttcctattcaaaaagccaccaacttattattagattggtaagattttaaaaaccctaaccaccaccttctctcttacttttcag 54653582  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||| || || ||||||||||| | | ||||||||    
T  54653581 ccaccacaaatctccatttgaaaaactaatatgattttcttcttacacatgatgtctgcaacaaaacccctacatctattttgggattggagaactttca 54653482  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaaccagaatcatacaatt 322  Q
    ||||| ||||| |  || | |||||||||||||| ||||| |||||||  ||||||||| |||||||||  |||| ||||||||||| || |||||||||    
T  54653481 ccggcaaccactgtgccagaaaccgctgcaaccgcgccggtgaccaccatttaatttctacaaaaactc--aacagtttatgaaccataagcatacaatt 54653384  T
Q  323 act 325  Q
    |||    
T  54653383 act 54653381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 23 - 328
Target Start/End: Original strand, 47807227 - 47807529
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  47807227 ttgaactactctcatcttcctcttcgaaaaggcaccaacttattattagattg-taagattttaaaaaccctaaccaccaccttctctctcactttccgg 47807325  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| |   | |||||||||||||||||| ||||||||||||||||||||| |||||||     
T  47807326 ccaccacatatctcgatttgaaaaactaatatgattttcttctttcatgtgatgtctgcaacaaaacccgtatatttattttgggatcgaagaactttcg 47807425  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaa-ccagaatcatacaat 321  Q
    |||||||||||||| |||| ||| |||||||||| |||||| ||||||||||||||| | |||||||||| |||||  |||||| ||| || ||||||||    
T  47807426 ccggcgaccaccgcgccggaaactgctgcaaccgcgccggc-accaccgcttaatttatgcaaaaactcataacaa--tatgaacccaaaagcatacaat 47807522  T
Q  322 tactcca 328  Q
    |||||||    
T  47807523 tactcca 47807529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 23 - 326
Target Start/End: Complemental strand, 51825327 - 51825025
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| ||||| |||||||||||||||||| || ||| |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| |    
T  51825327 ttgaactactcttatcttcctcttcaaaaaggcatcaagttattattagattgataagattttaaaaaccctaacccccaccttctctcttactttccag 51825228  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| || |||||    
T  51825227 ccaccacaaatctccatttgaaaaactaatatgattttcttcttcctcattatgtctgcaacaaaacccctatatttattttggggtcgaagaaatttca 51825128  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaa-ccagaatcatacaat 321  Q
     |||||||||||||||||| |||   |||||| | | | | |||||||||||||||| | |||||||||  ||||||||||||| ||| || ||||||||    
T  51825127 tcggcgaccaccgcaccggaaactattgcaactgcgtcagtgaccaccgcttaatttatgcaaaaactc--aacaatttatgaacccaaaagcatacaat 51825030  T
Q  322 tactc 326  Q
    |||||    
T  51825029 tactc 51825025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 290
Target Start/End: Complemental strand, 43102984 - 43102857
Alignment:
Q  163 tcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttcaccggcgaccaccgcaccgggaaccgctgcaaccgtgccgg 262  Q
    |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||  ||| |||   ||| |||  |||||    
T  43102984 tcttccccataatgtctgcaacaaaacccctaaatttattttgggatcgaaaaactttcaccgacgatcaccgcgtcggaaactagtgcgacctcgccgg 43102885  T
Q  263 cgaccaccgcttaatttcttcaaaaact 290  Q
    |||||||  |||||||||| ||||||||    
T  43102884 cgaccactacttaatttctgcaaaaact 43102857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 23 - 328
Target Start/End: Original strand, 19278744 - 19279047
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19278744 ttgaactactctcatcttcctcttcaaaaagccaccaacttattattagattggtaagattttaaaaaccctaaccaccaccttctctcttactttccgg 19278843  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| | || || ||||||||||| | | ||||||||    
T  19278844 ccaccacaaatctccatttgaaaaactaatatgattttcttcttacccatgatgtctgcaacaaaactcctacatctattttgggattggagaactttca 19278943  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaaccagaatcatacaatt 322  Q
    |||||||||||||  |||| ||||||| |||||| ||||| ||||||| |||||||||| |||||||||  |||||||||||||| ||||||||||||||    
T  19278944 ccggcgaccaccgtgccggaaaccgctacaaccgcgccggtgaccaccacttaatttctgcaaaaactc--aacaatttatgaactagaatcatacaatt 19279041  T
Q  323 actcca 328  Q
    ||||||    
T  19279042 actcca 19279047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 23484677 - 23484618
Alignment:
Q  68 ttagattggttagattttaaaaaccctaaccaccaccttctctcttactttccggccacc 127  Q
    |||||||||||  |||| ||||| |  |||||||||||||||||||||||||||||||||    
T  23484677 ttagattggttgaatttcaaaaatctcaaccaccaccttctctcttactttccggccacc 23484618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 23 - 328
Target Start/End: Complemental strand, 3979026 - 3978725
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  3979026 ttgaactactctcatcttcctcttcaaaaagccaccaacttattattagattggtaagattttaaaaaccctaaccaccaccttctctcctactttccgg 3978927  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| || || ||||||||||| | | ||||||||    
T  3978926 ccaccacaaatctccatttgaaaaactaatatgattttcttcttacccatgatgtctgcaacaaaacccctacatctattttgggat-ggagaactttca 3978828  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaaccagaatcatacaatt 322  Q
    || ||||||||||  |||| |||||||||||||  ||||| ||||||| |||||||||| |||||||||  ||||||||||||||||||| | |||||||    
T  3978827 cc-gcgaccaccgtgccggaaaccgctgcaaccacgccggtgaccaccacttaatttctgcaaaaactc--aacaatttatgaaccagaagcgtacaatt 3978731  T
Q  323 actcca 328  Q
    ||||||    
T  3978730 actcca 3978725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 22590105 - 22590014
Alignment:
Q  37 tcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaa-accctaaccaccaccttctctcttactttccggccacca 128  Q
    ||||||||||||| || |||| || ||||| |||||||||| ||| ||| ||| |||| || |||||||||||||||||||||||||||||||    
T  22590105 tcttcctcttcaataa-ccactaatttatttttagattggtgagagtttgaaatacccaaatcaccaccttctctcttactttccggccacca 22590014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 23 - 290
Target Start/End: Original strand, 42027594 - 42027861
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||| | |||||||||||||||| || ||||||||||||||||||||||    
T  42027594 ttgaactactctcatcttcctcttcaaaaaaccacaaacatattattagattggtaaaattttaaaaaccctaagcatcaccttctctcttactttccgg 42027693  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttca 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||||    
T  42027694 ccaccacaaatctccatttgaaaaactaatatgattttcttcttccccataatgtctgcaacaaaatccctaaatttattttgggatcgaaaaactttca 42027793  T
Q  223 ccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaact 290  Q
    ||| ||||||||||  ||| |||  || | |||  |||||||||||||||||||||||| ||||||||    
T  42027794 ccgacgaccaccgcgtcggaaactactacgaccccgccggcgaccaccgcttaatttctgcaaaaact 42027861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 30934968 - 30935059
Alignment:
Q  37 tcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaa-accctaaccaccaccttctctcttactttccggccacca 128  Q
    ||||||||||||| || |||| || ||||| |||||||||| ||| ||| ||| |||| || |||||||||||||||||||||||||| ||||    
T  30934968 tcttcctcttcaataa-ccactaatttatttttagattggtgagagtttgaaatacccaaatcaccaccttctctcttactttccggctacca 30935059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 7e-84; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 25 - 321
Target Start/End: Complemental strand, 10085561 - 10085265
Alignment:
Q  25 gaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccggcc 124  Q
    |||| ||||| || ||||||||||||||| ||||||||||||||||||||| | |||||| |||||||  |||   ||||||||||||||||||||||||    
T  10085561 gaactactcttatattcctcttcaaaaaggcaccaacttattattagattgttaagatttaaaaaacctaaactctcaccttctctcttactttccggcc 10085462  T
Q  125 accacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggatcgaaaaactttcacc 224  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  | ||||||||||    
T  10085461 accacaaatctttatttgaaaaactaatatgattttcttcttccccatgatgtctgcaacaaaaccc-tatatttattttgggatcagagaactttcacc 10085363  T
Q  225 ggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgcttaatttcttcaaaaactcaaaacaatttatgaa-ccagaatcatacaat 321  Q
    |||||||||  | |||| ||| |||||||||  ||||| ||||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||||||    
T  10085362 ggcgaccactacgccggaaactgctgcaaccacgccggtgaccatcgcttaatttctgcaaaaactcacaacaatttatgaacccagaagcatacaat 10085265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 83 - 328
Target Start/End: Complemental strand, 1664134 - 1663885
Alignment:
Q  83 tttaaaaaccctaaccaccaccttctctcttactttccggccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgca 182  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||  | |||||||||    
T  1664134 tttaaaaaccataaccaccaccttctctcttactttccgactaccacaaatctcaatttgaaaaactaatatgattttcttcttccctgtgatgtctgca 1664035  T
Q  183 acaaaacccatatatttattttgggatcgaaaaactttcaccggcgaccaccgcaccgggaaccgctgcaaccgtgccggc---gaccaccgcttaattt 279  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||||| || |||| ||| |||||||||| ||| ||    |||||||||||| ||    
T  1664034 acaaaacccctatatttattttgggatcgaagaactttcgccggcgaccactgcgccggaaactgctgcaaccgcgccagcaggtaccaccgcttaaatt 1663935  T
Q  280 cttcaaaaactcaaaacaatttatgaa-ccagaatcatacaattactcca 328  Q
     | ||||||||||  |||||||||||| ||| || |||||||||||||||    
T  1663934 atgcaaaaactcattacaatttatgaacccaaaagcatacaattactcca 1663885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 328
Target Start/End: Original strand, 27893375 - 27893524
Alignment:
Q  176 gtctgcaacaaaacccatatatttattttgggatcgaaaaactttcaccggcgaccaccgcaccgggaaccgctgcaaccgtgccggcgaccaccgctta 275  Q
    ||||||||||||||||  |||| ||||||||||||| | |||||||||||||| ||||||  || | ||||| |||||||| ||||| ||||||| ||||    
T  27893375 gtctgcaacaaaaccccaatatatattttgggatcggagaactttcaccggcggccaccgtgcc-gaaaccgttgcaaccgcgccggtgaccaccactta 27893473  T
Q  276 atttcttcaaaaactcaaaacaatttatgaaccagaatcatacaattactcca 328  Q
    |||| | |||||||||  |||||||||||||||||||   |||||||||||||    
T  27893474 atttttgcaaaaactc--aacaatttatgaaccagaagtgtacaattactcca 27893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 33 - 241
Target Start/End: Original strand, 26788927 - 26789136
Alignment:
Q  33 ctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccggccaccacaaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26788927 ctcatcttcctcttcaaaaagccaccaacttattattagattggtaaaattttaaaaaccctaaccgccaccttctctcttattttccggccaccacaaa 26789026  T
Q  133 tctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatattta-ttttgggatcgaaaaactttcaccggcgacc 231  Q
    ||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||||| | |||||||| || |||||    
T  26789027 tctccgtttgaaaaattaatatgattttcttcttctccattatgtctgcaacaaaacccctatatttatttttgggatcggataactttcatcgacgacc 26789126  T
Q  232 accgcaccgg 241  Q
    ||||| ||||    
T  26789127 accgcgccgg 26789136  T

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Target: chr4; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 3217324 - 3217138
Alignment:
Q  23 ttgaaccactctcatcttcctcttcaaaaagccaccaacttattattagattggttagattttaaaaaccctaaccaccaccttctctcttactttccgg 122  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||   |||||||||||||| |||||||    
T  3217324 ttgaactactcttatcttcctcttcaaaaaggcaccaacttattattagattgttaagattttaaaaaccctaactctcaccttctctcttattttccgg 3217225  T
Q  123 ccaccacaaatctccattcgaaaaactaatatgattttcttcttccccatcatgtctgcaacaaaacccatatatttattttgggat 209  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  3217224 ccaccacaaatctctatttgaaaaactaatatgattttcttcttccccataatgtttgcaacaaaacccctatatttattttgggat 3217138  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 42193494 - 42193536
Alignment:
Q  86 aaaaaccctaaccaccaccttctctcttactttccggccacca 128  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  42193494 aaaaaccccaaccaccaccttctctcttactttccagccacca 42193536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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