View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21195_high_2 (Length: 376)
Name: NF21195_high_2
Description: NF21195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21195_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 13 - 358
Target Start/End: Complemental strand, 48658312 - 48657967
Alignment:
| Q |
13 |
tgagagttaccatctgcaaatgtccaacaacttcggtactgtcaaccaagtgtgctgcttttccaaaaaaggaatgaacccctgttgctatcactacagc |
112 |
Q |
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| T |
48658312 |
tgagagttaccttctgaaaatgtccaacaacttcggtactgtcaaccaagtgtgctgcttttccaaaaaaggaatgaacccctgttgctatcactacagc |
48658213 |
T |
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| Q |
113 |
ttcaatctctccgtgtttacacgttgaacctgaaaagacctcatcaccagnnnnnnncgtgacaggtagggactctccagtaagggctgactgcatgaat |
212 |
Q |
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| T |
48658212 |
ttcaatctctccgtgtttacacgttgaacctgaaaagacctcgtcaccagtttttttcgtgacaggtagggactctccagtaagggctgactgcatgaat |
48658113 |
T |
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| Q |
213 |
caaaaccaagtcatcatatgaactccgtcctgattcttgatcagttatatacagtttatgtcatgaaaaaatatatagtgaaaacattaatgagaagaaa |
312 |
Q |
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| T |
48658112 |
caaaaccaagtcatcatatgaactccgtcctgattcttgatcagttatatacagtttatgtcatgaaaaaatatatagtgaaaacattaatgagaagaaa |
48658013 |
T |
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| Q |
313 |
cttgtaacacaatttttcttcatttccgtctaacaaatgaagactt |
358 |
Q |
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| T |
48658012 |
cttgtaacacaatttttcttcatttccgtctaacaaatgaagactt |
48657967 |
T |
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