View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21195_low_5 (Length: 249)
Name: NF21195_low_5
Description: NF21195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21195_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 48659884 - 48660125
Alignment:
| Q |
1 |
aaaattatttttgcgaagttttttattaaccactcaaatattaaactgtgatctaattgtttacttttctgtaggttcttacctcaattggtaacttctg |
100 |
Q |
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| T |
48659884 |
aaaattatttttgcaaagttttttattaaccactcaaatattaaactgtgatctaattgtttacttttctgtaggttcttacctcaattggcaacttctg |
48659983 |
T |
|
| Q |
101 |
catttgctcaatagctatagggatgattcttgaaataattataatgttccctgtggagcaccgttcatacagggatggaatcaacaaccttcttgttctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48659984 |
catttgctcaatagctatagggatgattcttgaaataattataatgttccctgtggagcaccgttcatacagggatggaatcaacaaccttcttgttctc |
48660083 |
T |
|
| Q |
201 |
ctgattggaggaattcccatagctatgccaacagtataatct |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
48660084 |
ctgattggaggaattcccatagctatgccaacagtattatct |
48660125 |
T |
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