View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21196_low_9 (Length: 297)
Name: NF21196_low_9
Description: NF21196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21196_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 32828566 - 32828850
Alignment:
| Q |
1 |
tcattttccacaagactttgatcacccttcgtcgcttcaactctcctcgttctcttcttcgacttaaacttccttcgggtaaaatatttaaacccctctt |
100 |
Q |
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||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828566 |
tcattttcctcaagcctttgatcacccttcgtcgcttcaactctcctcgttctcttcttcgacttaaacttccttcgggtaaaatatttaaacccctctt |
32828665 |
T |
|
| Q |
101 |
tattatcaacatccacaacctctaattcctctttcccatcaccctccacagcctccaattcttccttcctatcatcctccacaacctccaattcatcttt |
200 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828666 |
tattatcaacctccacaacctctatttcctctttcccatcaccctccacagcctccaattcttccttcctatcatcctccacaacctccaattcatcttt |
32828765 |
T |
|
| Q |
201 |
cttatcaacctccaacacctcatcaaacaacttccttttcctaccactcaattccctctcctccttcacttcaaattccacgttc |
285 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828766 |
cttatcaacctccaacacctcatcaaacaacttccttttcctaccactcaattccctctcctccttcacttcaaattccacgttc |
32828850 |
T |
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