View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21197_high_43 (Length: 307)
Name: NF21197_high_43
Description: NF21197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21197_high_43 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 37345825 - 37346110
Alignment:
| Q |
1 |
acaatgatttcaaggaagatggatgatcaactagatggctctagggtaatcaactatgattcattcttaattgatgttttcatttttctttaagaaatga |
100 |
Q |
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| T |
37345825 |
acaatgatttcaaggaagatggatgatcaactagatggctctagggtaatcaactatgattcattcttaattgatgtttttatttttctttaagaaatga |
37345924 |
T |
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| Q |
101 |
ttttggaattttcatcttaactaaatactattgtttatgatgatgattttgtaggataggggatttaaatcagagcattatcaaaagctagagacaaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37345925 |
ttttggaattttcatcttaactaaatactattgtttatgatgatgattttgtaggataggggatttaaatcagagcattatcaaaagctagagacaaatg |
37346024 |
T |
|
| Q |
201 |
attgtgatatgaatttcaatggaaaaaatattgagtgtgcagatttgaagaaaaggggactttgcttggttcctatgtccatgttg |
286 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37346025 |
attgtgatatgaatttcaatggaaaaaatattgagtgcgcagatttgaagaaaaggggactttgcttggttcctatgtccatgttg |
37346110 |
T |
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