View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21197_low_13 (Length: 498)
Name: NF21197_low_13
Description: NF21197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21197_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 18 - 492
Target Start/End: Original strand, 44702295 - 44702774
Alignment:
| Q |
18 |
tcaatttgcaagggtcaaatgctagtgccaaagaagtgcataaagactttaattacaatatgtttttccttcatactagaaatcaaaggaatatatgaga |
117 |
Q |
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| T |
44702295 |
tcaatttgcaagggtcaaatgctagtgccaaagaagtgcataacgactttaattacaatatgtttttccttcatacttgaaatcaaaggaatatatgaga |
44702394 |
T |
|
| Q |
118 |
atatccataaaatatgctatataattgtgtaaacattttttacgcttactaatgtttatcttatttttctttcttcagaatctaccgtaactatggcttt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44702395 |
atatccataaaatatgctatataattgtgtaaacattttttacacttaccaaggtttatcttatttttctttcttcagaatctaccgtaactatggcttt |
44702494 |
T |
|
| Q |
218 |
tgacagtgaataattctatcatgatacacccacagttttggccatttttggaccatctatgaaactatgttttggttttaagattaagcataatttttcc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44702495 |
tgacagtgaataattctatcatgatacacccacagttttggccatttttggaccatctatgaaactatgttttggttttaagattaagcataatttttcc |
44702594 |
T |
|
| Q |
318 |
ttagttcgaagttctcgatgtcccaaatcattttctttcgagggtaagatgattccacttgaccaataaaaacattgataaagcatatcttttactaaaa |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44702595 |
ttagttcgaagttctcgatgtcccaaatcattttctttcgagggtaagatgattccacttgaccaataaaaacattgataaagcatatcttttactaaaa |
44702694 |
T |
|
| Q |
418 |
taatttccattatttttgaaggtttctttaatt-----ttacattacattcatattctctccctttttctttcttctcac |
492 |
Q |
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||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
44702695 |
taatttccattatttttgaaggtttctttaatttgacattacaatacattcatattctctccctttttctttcttatcac |
44702774 |
T |
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