View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21197_low_22 (Length: 457)

Name: NF21197_low_22
Description: NF21197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21197_low_22
NF21197_low_22
[»] chr1 (27 HSPs)
chr1 (31-447)||(9353189-9353599)
chr1 (293-447)||(26657653-26657807)
chr1 (31-198)||(26657961-26658127)
chr1 (318-447)||(9328344-9328473)
chr1 (31-179)||(9328488-9328636)
chr1 (347-426)||(11769831-11769910)
chr1 (31-204)||(30675891-30676065)
chr1 (43-222)||(34533075-34533257)
chr1 (339-425)||(50047374-50047460)
chr1 (293-426)||(30781958-30782091)
chr1 (323-415)||(23223623-23223715)
chr1 (31-374)||(12810456-12810798)
chr1 (31-257)||(23519212-23519436)
chr1 (31-94)||(50047663-50047727)
chr1 (32-80)||(23223966-23224014)
chr1 (316-420)||(25730378-25730481)
chr1 (32-83)||(11769478-11769529)
chr1 (339-426)||(12423744-12423831)
chr1 (43-94)||(21549225-21549276)
chr1 (347-426)||(23519606-23519685)
chr1 (51-94)||(25731053-25731096)
chr1 (31-69)||(18300518-18300556)
chr1 (364-446)||(30675662-30675744)
chr1 (280-420)||(9252380-9252520)
chr1 (38-85)||(15298354-15298401)
chr1 (45-84)||(25778322-25778361)
chr1 (36-81)||(26853801-26853846)
[»] scaffold0650 (2 HSPs)
scaffold0650 (31-181)||(5211-5361)
scaffold0650 (298-447)||(5559-5707)
[»] chr3 (22 HSPs)
chr3 (31-198)||(13911764-13911931)
chr3 (316-426)||(10341985-10342095)
chr3 (323-405)||(11521384-11521466)
chr3 (330-426)||(25883301-25883397)
chr3 (315-426)||(16970660-16970770)
chr3 (31-222)||(10342200-10342395)
chr3 (33-85)||(11475441-11475493)
chr3 (323-415)||(18066006-18066098)
chr3 (34-173)||(33914080-33914219)
chr3 (311-368)||(33914369-33914426)
chr3 (336-396)||(27415395-27415455)
chr3 (31-103)||(27415685-27415757)
chr3 (32-94)||(8401881-8401943)
chr3 (31-73)||(11521775-11521817)
chr3 (31-125)||(18066214-18066308)
chr3 (319-408)||(2729432-2729521)
chr3 (31-76)||(25883651-25883696)
chr3 (381-447)||(19219082-19219149)
chr3 (340-415)||(21018086-21018161)
chr3 (33-94)||(14280767-14280828)
chr3 (31-100)||(21018170-21018239)
chr3 (32-76)||(26419343-26419387)
[»] chr4 (29 HSPs)
chr4 (31-300)||(47024227-47024496)
chr4 (288-443)||(34864075-34864229)
chr4 (330-426)||(27302975-27303071)
chr4 (37-258)||(15192640-15192860)
chr4 (323-426)||(5676398-5676501)
chr4 (312-443)||(18898163-18898294)
chr4 (293-426)||(17026480-17026613)
chr4 (31-199)||(17024403-17024571)
chr4 (313-447)||(47024569-47024703)
chr4 (311-447)||(12111129-12111265)
chr4 (330-426)||(15192401-15192497)
chr4 (32-94)||(10577034-10577096)
chr4 (37-135)||(18898524-18898622)
chr4 (339-407)||(51884819-51884887)
chr4 (347-426)||(1695684-1695763)
chr4 (323-426)||(5906576-5906679)
chr4 (344-407)||(10320055-10320118)
chr4 (228-279)||(18898395-18898446)
chr4 (36-94)||(5676767-5676825)
chr4 (184-273)||(34863890-34863979)
chr4 (38-85)||(25314725-25314772)
chr4 (347-426)||(25315069-25315148)
chr4 (31-85)||(1695379-1695433)
chr4 (43-85)||(12806445-12806487)
chr4 (31-85)||(19602361-19602415)
chr4 (32-94)||(26188328-26188389)
chr4 (43-85)||(29438007-29438049)
chr4 (38-83)||(9782582-9782627)
chr4 (34-221)||(12110807-12110994)
[»] chr8 (28 HSPs)
chr8 (331-426)||(16052098-16052193)
chr8 (301-447)||(28901141-28901287)
chr8 (323-426)||(28902287-28902390)
chr8 (313-426)||(16054492-16054605)
chr8 (31-194)||(22892714-22892880)
chr8 (293-447)||(11310040-11310193)
chr8 (31-258)||(15213234-15213458)
chr8 (330-426)||(13081755-13081851)
chr8 (36-120)||(28900804-28900888)
chr8 (313-444)||(22894336-22894466)
chr8 (30-85)||(23893682-23893737)
chr8 (347-426)||(24120422-24120501)
chr8 (323-426)||(29047154-29047257)
chr8 (330-420)||(5153962-5154052)
chr8 (32-85)||(16051775-16051829)
chr8 (32-85)||(23876529-23876582)
chr8 (33-85)||(13304984-13305036)
chr8 (30-85)||(18771517-18771572)
chr8 (336-391)||(24696816-24696871)
chr8 (43-85)||(12957093-12957135)
chr8 (44-94)||(24927344-24927394)
chr8 (51-85)||(30850549-30850583)
chr8 (351-408)||(5569981-5570038)
chr8 (32-85)||(11437984-11438037)
chr8 (32-85)||(12774340-12774393)
chr8 (350-415)||(14976952-14977017)
chr8 (197-258)||(28902527-28902588)
chr8 (45-85)||(26853238-26853277)
[»] chr5 (26 HSPs)
chr5 (287-442)||(24841935-24842090)
chr5 (319-447)||(26329879-26330007)
chr5 (43-258)||(12265092-12265307)
chr5 (31-135)||(26329531-26329635)
chr5 (31-85)||(24268676-24268730)
chr5 (31-85)||(24345306-24345360)
chr5 (318-447)||(17027704-17027833)
chr5 (32-142)||(17028793-17028903)
chr5 (315-369)||(18452627-18452681)
chr5 (347-415)||(16622514-16622582)
chr5 (323-407)||(25680804-25680888)
chr5 (32-83)||(20695216-20695267)
chr5 (33-85)||(17381482-17381534)
chr5 (315-391)||(24517579-24517655)
chr5 (31-94)||(25594129-25594192)
chr5 (315-401)||(25594497-25594583)
chr5 (32-85)||(16622115-16622168)
chr5 (44-85)||(20084081-20084122)
chr5 (38-203)||(30072585-30072747)
chr5 (339-379)||(22230049-22230089)
chr5 (89-181)||(23157322-23157414)
chr5 (37-180)||(20715071-20715213)
chr5 (347-426)||(30072314-30072393)
chr5 (340-414)||(11274160-11274234)
chr5 (31-85)||(24842268-24842322)
chr5 (40-85)||(22930549-22930594)
[»] chr7 (38 HSPs)
chr7 (36-273)||(9070820-9071057)
chr7 (31-199)||(7142520-7142688)
chr7 (339-426)||(29544718-29544805)
chr7 (31-198)||(10670013-10670180)
chr7 (315-426)||(20470615-20470726)
chr7 (347-413)||(315384-315450)
chr7 (33-222)||(4091965-4092157)
chr7 (338-447)||(9801703-9801812)
chr7 (31-191)||(23126603-23126761)
chr7 (341-413)||(7815534-7815606)
chr7 (319-414)||(21545636-21545731)
chr7 (31-85)||(7493863-7493917)
chr7 (31-85)||(7777568-7777622)
chr7 (31-177)||(9405335-9405477)
chr7 (313-390)||(21472029-21472106)
chr7 (44-85)||(21545344-21545385)
chr7 (31-135)||(7815843-7815946)
chr7 (31-75)||(20446807-20446851)
chr7 (340-447)||(20017130-20017237)
chr7 (31-77)||(2630001-2630047)
chr7 (31-77)||(20040299-20040345)
chr7 (31-85)||(21472365-21472419)
chr7 (32-85)||(3400412-3400465)
chr7 (343-408)||(7494912-7494977)
chr7 (31-83)||(7151461-7151513)
chr7 (339-447)||(10670404-10670512)
chr7 (31-78)||(315717-315764)
chr7 (341-426)||(1074651-1074736)
chr7 (31-71)||(26839677-26839717)
chr7 (376-447)||(4977687-4977758)
chr7 (43-94)||(5312266-5312317)
chr7 (32-85)||(5636790-5636844)
chr7 (31-77)||(20050452-20050498)
chr7 (43-85)||(24596483-24596525)
chr7 (32-85)||(17880419-17880472)
chr7 (31-85)||(20470250-20470306)
chr7 (323-447)||(7142275-7142398)
chr7 (33-85)||(18468200-18468252)
[»] chr2 (19 HSPs)
chr2 (315-420)||(27417068-27417173)
chr2 (323-405)||(1733310-1733392)
chr2 (32-135)||(21842672-21842778)
chr2 (299-426)||(35708001-35708128)
chr2 (31-85)||(30999354-30999408)
chr2 (330-426)||(25474235-25474331)
chr2 (31-83)||(25474591-25474643)
chr2 (32-94)||(9504489-9504552)
chr2 (32-94)||(9515855-9515918)
chr2 (31-85)||(14921564-14921618)
chr2 (341-426)||(16593582-16593667)
chr2 (31-83)||(1733688-1733740)
chr2 (32-135)||(17884041-17884147)
chr2 (32-83)||(18235789-18235839)
chr2 (31-61)||(35708374-35708404)
chr2 (31-83)||(18533014-18533066)
chr2 (330-402)||(19949345-19949417)
chr2 (45-85)||(25460505-25460545)
chr2 (346-426)||(30998969-30999049)
[»] scaffold0386 (4 HSPs)
scaffold0386 (323-425)||(8522-8624)
scaffold0386 (32-204)||(11237-11412)
scaffold0386 (330-426)||(11619-11715)
scaffold0386 (32-94)||(8207-8269)
[»] scaffold0282 (2 HSPs)
scaffold0282 (31-198)||(22094-22261)
scaffold0282 (339-447)||(22443-22551)
[»] chr6 (12 HSPs)
chr6 (323-426)||(17860262-17860365)
chr6 (350-447)||(30355493-30355591)
chr6 (313-413)||(15575135-15575235)
chr6 (31-94)||(19670089-19670152)
chr6 (43-201)||(16528117-16528278)
chr6 (37-125)||(30235853-30235938)
chr6 (31-85)||(15575530-15575584)
chr6 (31-83)||(9725660-9725712)
chr6 (32-94)||(26499331-26499393)
chr6 (32-85)||(16439932-16439985)
chr6 (32-125)||(17859957-17860050)
chr6 (32-76)||(13723343-13723387)
[»] scaffold0362 (2 HSPs)
scaffold0362 (330-426)||(7817-7913)
scaffold0362 (31-85)||(8242-8296)
[»] scaffold0186 (1 HSPs)
scaffold0186 (30-85)||(33219-33274)
[»] scaffold0855 (1 HSPs)
scaffold0855 (31-85)||(2497-2551)
[»] scaffold0847 (1 HSPs)
scaffold0847 (31-85)||(2662-2716)
[»] scaffold0190 (1 HSPs)
scaffold0190 (32-94)||(11143-11205)
[»] scaffold0171 (1 HSPs)
scaffold0171 (146-204)||(21847-21905)
[»] scaffold0011 (1 HSPs)
scaffold0011 (349-447)||(228026-228124)
[»] scaffold0100 (1 HSPs)
scaffold0100 (32-85)||(37570-37623)


Alignment Details
Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 447
Target Start/End: Complemental strand, 9353599 - 9353189
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| || |||||||| |||||||||||| |||||||||||||| || ||||| |  |||||| ||||| | | |  ||||||||||| |||| || |    
T  9353599 tcatggaaatatacatcacaacaaaacaatagaaaaacataccctaaagggaacaagaagaggaagaaatcatacctaaaaactctgatgtttgaccctt 9353500  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacga--t 228  Q
    | ||| ||  ||||||||| ||||||||  ||||||||||||||||||| |   ||||| ||||||||||||||  || |||| |||||||    ||  |    
T  9353499 gtcttgaatcgtcaactttttgaatgaaaaataatgagtgcaagggtctttatatatagaaaatgattacttaggatttaagagaagaaaa-ttggattt 9353401  T
Q  229 ttttgcactgatccaacttggaaaacaagctgcatgcaatttctgtccgcagccatgcacaaacggcgcctgaggcatccattgaggtgcgaaatcttgc 328  Q
    |||||||| ||||||||||| ||||||||||||| | |||||||       |||| ||  ||| ||||| ||||||| ||  || ||||| |||||||||    
T  9353400 ttttgcaccgatccaacttgaaaaacaagctgcaagaaatttct-------gccaggcgtaaatggcgcatgaggcagcccatgtggtgcaaaatcttgc 9353308  T
Q  329 attttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagc 428  Q
     ||||| |||| | ||||||||||||||| | ||||||||  |||||||||  | |||||||| |||| || ||||| || |||||| |||| |||||      
T  9353307 tttttcctcccatattcgatcgttcttccatatggaaactcataggaacttggactgaattttcttcacttagtattttcttcaaaaaccttctaagaat 9353208  T
Q  429 gatagacttcaatcttcat 447  Q
    ||| || ||||||||||||    
T  9353207 gattgaattcaatcttcat 9353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 26657807 - 26657653
Alignment:
Q  293 ggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttta 392  Q
    |||| |||||||| || |||| ||||||| |||| | ||||  |||||||||||||| ||||| |||||| ||||| |||||||||| |||||||||||     
T  26657807 ggcgtctgaggcagcccttgatgtgcgaattcttacgtttttctcccgttttcgatcattctttcgtctgaaaactcctaggaacttgaaatgaattttc 26657708  T
Q  393 ttcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    |||| ||||| ||||| |||||| |||| ||||| | || |||||| || |||||    
T  26657707 ttcactttgttttgtcttcaaaaaccttataagaactattgacttcgattttcat 26657653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 26658127 - 26657961
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||| | | | ||| ||||| | | ||||| ||||||||||||| || |    
T  26658127 tcatgacaacaaacatcacaacaaaacaata-aaaaacataccctagagagaacaagagaatgaagaaatcattccttgaagctctgatgcttgaccctt 26658029  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatt 198  Q
    ||||| ||||| ||   |||||||| ||  ||||||||||| ||||| |||  ||||| |||||||||    
T  26658028 gccttgaactgccagtgttctgaataaaaaataatgagtgctagggtatctatttataacaaatgatt 26657961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 447
Target Start/End: Complemental strand, 9328473 - 9328344
Alignment:
Q  318 cgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagc 417  Q
    ||||||||||| ||||| |||| | ||| ||||||||||| | |||||||| ||||||||||  | |||||||| |||| || |||||||| |||||| |    
T  9328473 cgaaatcttgctttttcctcccatattcaatcgttcttccatatggaaactcctaggaacttggactgaattttcttcacttagtattgtcttcaaaaac 9328374  T
Q  418 cttttaagagcgatagacttcaatcttcat 447  Q
    ||| ||||| |||| || ||||||||||||    
T  9328373 cttctaagaacgattgaattcaatcttcat 9328344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 9328636 - 9328488
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| || |||||||| |||||||||||| |||||||||||||| || ||||| |  |||||| ||||| | |  | ||||||||||| |||| || |    
T  9328636 tcatggaaatatacatcacaacaaaacaatagaaaaacataccctatagggaacaagaagaggaagaaatcataccctaaaactctgatgtttgaccctt 9328537  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtct 179  Q
    | ||| ||  ||||||||| ||||||||  |||||||||||||||||||    
T  9328536 gtcttgaatcgtcaactttttgaatgaaaaataatgagtgcaagggtct 9328488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 11769831 - 11769910
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||| |||| ||||||||||| |||||| |||| |||||    
T  11769831 atcgttcttccgtctggaaactcataggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaaga 11769910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 30676065 - 30675891
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatcctgcattgaaactctgatgcttgaacca 129  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  | | ||||||   | ||||||| |||||||||||||||  ||  |     
T  30676065 tcatggcaacaaacatcataacaaaacaatagaaaaacataccctagagagactaagaggaggatggagatcctgccttgaaactctgatgcccgactct 30675966  T
Q  130 tgcctttaa-ctgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttag 204  Q
    || ||| || || | | || ||||||||||  ||||||||||||| |||||||  |||||||| ||||||||||||    
T  30675965 tgtcttgaatctct-agctctctgaatgaaatataatgagtgcaatggtctctatttatagcatatgattacttag 30675891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 34533257 - 34533075
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaa-atcctg--cattgaaactctgatgcttgaaccatgcctttaac 139  Q
    |||||||| |||||||||  ||||||||||||||||||||||| | ||||||  || |||||   | |||||||| |||||||||| || ||| || |||    
T  34533257 acatcataccaaaacaatcgaaaaacataccctagagagaacaagaggaggatgaagatcctcttccttgaaactatgatgcttgacccgtgcattgaac 34533158  T
Q  140 tgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaac 222  Q
    ||| |  ||||| ||||||| | |||| ||||||| ||||||  ||||| || ||||||||||||| || |||| ||||||||    
T  34533157 tgttagttttctaaatgaataagaatgtgtgcaagagtctctatttatatcatatgattacttagagtttaagagaagaaaac 34533075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 425
Target Start/End: Complemental strand, 50047460 - 50047374
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaag 425  Q
    ||||||| |||||||||| ||  | ||||| |||||||||||||||||||||| |||||||||||||||| |||| | |||||||||    
T  50047460 cgttttctatcgttcttctgttcgaaaactcctaggaacttaaaatgaattttcttcattttgtattgtcttcaataaccttttaag 50047374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 426
Target Start/End: Complemental strand, 30782091 - 30781958
Alignment:
Q  293 ggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttta 392  Q
    ||||||||||||| ||  | ||||||||  |||||| ||||| ||| ||||||||||||||||  | ||| ||||  |||||||||| |||| ||||||     
T  30782091 ggcgcctgaggcagcctctcaggtgcgatttcttgcgttttcttcctgttttcgatcgttcttttgcctgaaaacacctaggaacttgaaatcaattttc 30781992  T
Q  393 ttcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||| ||||||||||| |||| | ||||||||||    
T  30781991 ttcactttgtattgtcttcaacaaccttttaaga 30781958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 23223715 - 23223623
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    |||||||||||| ||||||||||||||||||   ||  | |||||| |||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  23223715 tcttgcattttcgtcccgttttcgatcgttcaatcgattagaaactcctaggaacttgaaatgaatttttttcactttgtattgtcttcaaaa 23223623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 374
Target Start/End: Complemental strand, 12810798 - 12810456
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||||| || ||||||||||| |||| |||| ||||||||| |||||||| | | | || |||||||||| ||||| || |||   |||| || |    
T  12810798 tcatggcaacaaacgtcataacaaaataatagaaaagcataccctaaagagaacaagagaatgacaaaatcctgccttgaagctttgagttttgaccctt 12810699  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgattt 230  Q
     |||| || |||||   |||||||||||| |||||  ||||||| || |||  |||||| |||| ||||  |||  || |  | ||||||||   |  ||    
T  12810698 tccttgaattgtcagtgttctgaatgaataataatatgtgcaagagtttctatttatagaaaataattaactagggtttagaagaagaaaactgggcatt 12810599  T
Q  231 ttgcactgatccaacttggaaaacaagctgcatgcaatttctgtccgcagccatgcacaaacggcgcctgaggcatccattgaggtgcgaaatcttgcat 330  Q
    |||||| |||||| |||| ||||||||||||  | |||||||| |||||||   |  | || ||||||||||||| ||  |||||| |||| |||||  |    
T  12810598 ttgcaccgatccagcttgaaaaacaagctgcgggaaatttctgcccgcagctgggtgctaatggcgcctgaggcaacccgtgaggtacgaattcttgggt 12810499  T
Q  331 tttcatcccgttttcgatcgttcttccgtctggaaacttctagg 374  Q
    |||  |||| ||||||||| ||||| |||||||||||| |||||    
T  12810498 ttttctccc-ttttcgatcattctttcgtctggaaactcctagg 12810456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 257
Target Start/End: Original strand, 23519212 - 23519436
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| |||| ||||||||||||||||||| |||||||||  ||| |||||||| | | ||| || |||||| | ||||| |||| ||| |||| || |    
T  23519212 tcatggtaacaaacatcataacaaaacaatagaaaaacatagtctaaagagaacaagagaagg-aagaatcctacgttgaagctctaatgtttgaccctt 23519310  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgattt 230  Q
    ||| |  || |||||  |||| ||||||  |||||| ||||||||||||||  |||||||| ||| |||||| |  || |||| |||||||    | |||    
T  23519311 gcc-tagaccgtcaatgttctaaatgaactataatgtgtgcaagggtctctatttatagcatatggttactttgggtttaagagaagaaaattgtgtttt 23519409  T
Q  231 ttgcactgatccaacttggaaaacaag 257  Q
    ||||||| |||||||||| ||||||||    
T  23519410 ttgcactaatccaacttgaaaaacaag 23519436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 50047727 - 50047663
Alignment:
Q  31 tcatggcaacata-catcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  50047727 tcatggcaacaaaacatcattacaaaacaatataaaaacataccctagagagaacaagaggagga 50047663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 23224014 - 23223966
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagaga 80  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  23224014 catgacaacatacatcattacaaaacaatagaaaaacataccctagaga 23223966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 420
Target Start/End: Original strand, 25730378 - 25730481
Alignment:
Q  316 tgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    |||||| | |||||||||| ||||||||||||| |||||||| || | ||||||||||||| || ||| ||||||| |||| |||  |||||| ||||||    
T  25730378 tgcgaatttttgcattttcgtcccgttttcgattgttcttccatccgtaaacttctaggaattttaaa-gaattttcttcactttcgattgtcgtcaaaa 25730476  T
Q  416 gcctt 420  Q
     ||||    
T  25730477 acctt 25730481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 11769478 - 11769529
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||| ||||| |||||||||||||||||||||||||| ||| |||||||||    
T  11769478 catggaaacattcatcataacaaaacaatataaaaacacaccatagagagaa 11769529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 12423744 - 12423831
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||| ||||||||| ||| || ||||| |||||||||| ||||||||||  |||| ||||||||||| |||| | |||| |||||    
T  12423744 cgttttcaatcgttctttcgtttgaaaactcctaggaacttgaaatgaatttccttcactttgtattgtcttcaacaaccttctaaga 12423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 21549276 - 21549225
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| | ||||||    
T  21549276 acatcattacaaaacaatagaaaaacataccctagagagaacaagaggagga 21549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 23519606 - 23519685
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||| |||| ||| ||||||| |||| | |||| |||||    
T  23519606 atcgttcttccgtctgaaaactcctaggaacttgaaataaattttcttcactttctattgtcttcaacaaccttctaaga 23519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 25731096 - 25731053
Alignment:
Q  51 acaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  25731096 acaaaacaatataaaaacataccctagagagaacgggaggagga 25731053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 18300518 - 18300556
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaaca 69  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  18300518 tcatggcaacatacatcataacaaaacaatagaaaaaca 18300556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 446
Target Start/End: Complemental strand, 30675744 - 30675662
Alignment:
Q  364 aaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttca 446  Q
    ||||| |||||||||| ||||||||||| |||| |||||||| || |||||| |||| ||||| | || || |||||||||||    
T  30675744 aaactcctaggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaaccattgatttcaatcttca 30675662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 420
Target Start/End: Original strand, 9252380 - 9252520
Alignment:
Q  280 gccatgcacaaacggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaactt 379  Q
    |||| ||||||| || ||||||| || ||  |||||||| |||||||||  |||| || ||| || |||||||||||  |||| |||||  |||||||||    
T  9252380 gccaggcacaaatggtgcctgagacaacccatgaggtgccaaatcttgcgatttcctctcgtatttgatcgttcttcaatctgaaaactcataggaactt 9252479  T
Q  380 aaaatgaattttattcattttgtattgtcctcaaaagcctt 420  Q
      | |||||||| |||| || |||||||| |||||| ||||    
T  9252480 ggactgaattttcttcacttagtattgtcttcaaaaacctt 9252520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 15298354 - 15298401
Alignment:
Q  38 aacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||    
T  15298354 aacatacatcattacaaaacaaaagaaaagcataccctagagagaaca 15298401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 25778361 - 25778322
Alignment:
Q  45 atcataacaaaacaatataaaaacataccctagagagaac 84  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  25778361 atcattacaaaacaatagaaaaacataccctagagagaac 25778322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 26853801 - 26853846
Alignment:
Q  36 gcaacatacatcataacaaaacaatataaaaacataccctagagag 81  Q
    |||||||| ||||| | |||||||||||||||||||| ||||||||    
T  26853801 gcaacatagatcattataaaacaatataaaaacatactctagagag 26853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 5211 - 5361
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| | | | ||| ||||||||| ||||| ||||||||||||| || |    
T  5211 tcatgacaacatacatcataacaaaacaatagaaaaacatatcctagagagaacaagagaatgaagaaatcctgccttgaagctctgatgcttgaccctt 5310  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctct 181  Q
    ||||| ||| ||||   |||| ||||||| |||||||||||||||||||||    
T  5311 gccttgaaccgtcagtgttcttaatgaataataatgagtgcaagggtctct 5361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 5559 - 5707
Alignment:
Q  298 ctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcat 397  Q
    |||||||| ||  ||| |||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||| |||  ||||| || |||||||| ||||     
T  5559 ctgaggcaacccctgatgtgcgaaatcttgcgttttc-tcctgttttcgatcgttcttccgtctgaaaactcctacaaacttgaattgaattttcttcac 5657  T
Q  398 tttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    |||||||| || | |||  |||| ||||| | || || ||||||||||||    
T  5658 tttgtattttctttaaagaccttctaagaaccattgaattcaatcttcat 5707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 13911931 - 13911764
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| ||||||||||||| |||||||||| |||| ||||||||| |||||||| | | ||||||||||| ||| ||||| || |||| ||||| || |    
T  13911931 tcatggaaacatacatcatatcaaaacaatagaaaaccataccctatagagaacaagagaaggaaaaaatcatgccttgaagctatgatacttgaccctt 13911832  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatt 198  Q
    ||||| ||||||||   | || ||| ||| |||||||||||||||||||||  |||||| ||||||||    
T  13911831 gccttgaactgtcagtgtcctcaatcaataataatgagtgcaagggtctctatttatagaaaatgatt 13911764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 426
Target Start/End: Complemental strand, 10342095 - 10341985
Alignment:
Q  316 tgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    ||||||||| ||  |||||  ||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||  ||| ||||||||||| ||||||    
T  10342095 tgcgaaatcatgtgttttctccccgttttcgatcgttcttccgtctagaaactcctaggaacttgaaatgagtttttctcactttgtattgtcttcaaaa 10341996  T
Q  416 gccttttaaga 426  Q
     |||| |||||    
T  10341995 accttctaaga 10341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 405
Target Start/End: Complemental strand, 11521466 - 11521384
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtatt 405  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||  ||||||||    
T  11521466 tcttgcgttttcttcccgttttcgatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcgctttgtatt 11521384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 25883397 - 25883301
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| |||| |||||||| |||||| |||||| ||||| |||||||||| ||||||||||| |||| ||||||||||| |||| | |||| |||||    
T  25883397 ttttcttcccattttcgattgttctttcgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaaga 25883301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 426
Target Start/End: Complemental strand, 16970770 - 16970660
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaa 414  Q
    ||||||| |||||  ||||| ||||||||||||||||||||  ||||||||||| ||||||||||  ||| |||||| ||||| ||||||| || |||||    
T  16970770 gtgcgaattcttgtgttttcgtcccgttttcgatcgttcttttgtctggaaactgctaggaactt-caataaattttcttcatcttgtattttcttcaaa 16970672  T
Q  415 agccttttaaga 426  Q
    | |||| |||||    
T  16970671 aaccttctaaga 16970660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 10342395 - 10342200
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatc--ctgcattg-aaactctgatgcttgaa 126  Q
    ||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||| | ||||||   |||||  |||| ||| ||||||||||| ||||     
T  10342395 tcatgacaacatacatcataacaaaataatagaaaaatataccctagagagaacaagaggaggatggaaatcatctgccttgaaaactctgatgtttgac 10342296  T
Q  127 ccatgcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaac 222  Q
    ||  || || |||    |||||||||||| ||| |||||  ||||||| |||| |  |||||| ||||||||||||||  || |||| ||||||||    
T  10342295 cctcgctttgaaccactaactttctgaattaataataatatgtgcaagagtctatatttatagtaaatgattacttagggtttaagagaagaaaac 10342200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 11475493 - 11475441
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  11475493 atggcaacatatatcattacaaaacaatataaaaacataccttagagagaaca 11475441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 18066098 - 18066006
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    |||||| ||||||||||||| |||| |||||||  || |||||||| ||||||| || ||||||||||| |||| |||||||| || ||||||    
T  18066098 tcttgcgttttcatcccgttctcgagcgttctttggtttggaaactcctaggaagttgaaatgaattttcttcactttgtattttcttcaaaa 18066006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 33914080 - 33914219
Alignment:
Q  34 tggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgcc 133  Q
    |||||||| ||||  |||||||||| ||||||||||||||||| | |||||| | ||||||| ||||  ||   ||||||||||||| |||| |  ||||    
T  33914080 tggcaacaaacattgtaacaaaacattataaaaacataccctaaaaagaacaagaggaggaagaaattttgtcatgaaactctgatgtttgacctttgcc 33914179  T
Q  134 tttaactgtcaactttctgaatgaatgataatgagtgcaa 173  Q
    || |||  |||||||| ||||||||  |||||||| ||||    
T  33914180 ttgaaccatcaactttttgaatgaaaaataatgagcgcaa 33914219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 33914369 - 33914426
Alignment:
Q  311 tgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaact 368  Q
    ||||||||||||| |  ||||||| |||||||||||||||||||||||| ||||||||    
T  33914369 tgaggtgcgaaatataacattttcctcccgttttcgatcgttcttccgtatggaaact 33914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 27415455 - 27415395
Alignment:
Q  336 tcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattca 396  Q
    |||||||||||||||||||| ||||| |||||| ||||||| || ||||||||||| ||||    
T  27415455 tcccgttttcgatcgttctttcgtcttgaaactcctaggaagttgaaatgaattttcttca 27415395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 27415757 - 27415685
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcct 103  Q
    ||||||||| ||||| ||||||||||||||| ||||| |||||| |||||||||| | ||||||  |||||||    
T  27415757 tcatggcaatatacaccataacaaaacaatagaaaaagataccccagagagaacaagaggaggaggaaatcct 27415685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 8401881 - 8401943
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||  |||| || |||||||||||||||||||||||||||||| |||| | ||||||    
T  8401881 catggcaaccgacattattacaaaacaatataaaaacataccctagagataacaagaggagga 8401943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 11521817 - 11521775
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacatacc 73  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  11521817 tcatggcaacagacatcataaaaaaacaatataaaaacatacc 11521775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 18066308 - 18066214
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttga 125  Q
    ||||| ||| |||| |||||||||||||||| ||||| |||| ||| |||||||| | ||||||  ||||||| | ||||| || ||||||||||    
T  18066308 tcatgacaatatacgtcataacaaaacaatagaaaaagatactctatagagaacaagaggaggaggaaatcctactttgaacctatgatgcttga 18066214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 2729432 - 2729521
Alignment:
Q  319 gaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtc 408  Q
    |||||||||| ||||| |||| ||||||||||||||| | |||  |  || ||| |||||| |||||| ||||||||| |||||||||||    
T  2729432 gaaatcttgcgttttcgtcccattttcgatcgttcttgcatctaaattctcctacgaacttgaaatgatttttattcactttgtattgtc 2729521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 25883696 - 25883651
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacatacccta 76  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  25883696 tcatggcaacatacatagtaacaaaacaatagaaaaacatacccta 25883651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 19219082 - 19219149
Alignment:
Q  381 aaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgataga-cttcaatcttcat 447  Q
    |||||||||||||||| ||||||||||| |||||| |||| ||||| | || || |||||||||||||    
T  19219082 aaatgaattttattcactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcat 19219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 21018161 - 21018086
Alignment:
Q  340 gttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    ||||| |||||||||||| | || ||| | |||||||||| ||||||||||  ||||||||||||| || ||||||    
T  21018161 gtttttgatcgttcttccatttgtaaattcctaggaacttgaaatgaatttccttcattttgtattatcttcaaaa 21018086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 14280767 - 14280828
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||||||  ||| ||| ||||| ||||| ||||||||||||||||||||||| | ||||||    
T  14280767 atggcaaccgacaccattacaaagcaatagaaaaacataccctagagagaacaagaggagga 14280828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 21018239 - 21018170
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaat 100  Q
    |||||| |||| ||||||||||| ||||||| ||||||||| || ||| |||||| | ||||||| ||||    
T  21018239 tcatggaaacaaacatcataacataacaatagaaaaacatatcccagacagaacaagaggaggaagaaat 21018170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 26419387 - 26419343
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacatacccta 76  Q
    |||||||||  ||||||| ||||||||||| ||||||||||||||    
T  26419387 catggcaaccaacatcattacaaaacaatagaaaaacatacccta 26419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 300
Target Start/End: Original strand, 47024227 - 47024496
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||| ||||| ||||||||||||||||||| ||||| ||||| ||||||||||| | | ||||| ||||| ||| ||||  || |||||||||| || |    
T  47024227 tcatgacaacaaacatcataacaaaacaatagaaaaatataccttagagagaacaagagaaggaagaaatcttgccttgaggctttgatgcttgaccctt 47024326  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgattt 230  Q
    | ||| ||| |||||  |||| ||||||| ||||| |||||||||||||||  |||||| |||| |||| ||||  |  | || |||||| | |   |||    
T  47024327 gtcttgaaccgtcaatgttctaaatgaataataattagtgcaagggtctctatttatagaaaataattaattagggtgtaggagaagaaatctagacttt 47024426  T
Q  231 ttgcactgatccaacttggaaaacaagctgcatgcaatttctgtccgcagccatgcacaaacggcgcctg 300  Q
    | |||| ||||||  ||||||||||||||||| ||||||| || ||||| | | ||||| | ||||||||    
T  47024427 tcgcaccgatccagtttggaaaacaagctgcaggcaatttatgcccgcaactaggcacatatggcgcctg 47024496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 443
Target Start/End: Original strand, 34864075 - 34864229
Alignment:
Q  288 caaacggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaa 387  Q
    |||| ||||| ||||||| || |||||| | |||||||||  ||||| ||| |||||||||| || |||| |||| |||||||||||||||| |||||||    
T  34864075 caaatggcgcatgaggcagcccttgaggcgtgaaatcttgtgttttc-tcctgttttcgatcatttttccatctgaaaacttctaggaactttaaatgaa 34864173  T
Q  388 ttttattcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatct 443  Q
    |||| ||||||||||||||||  ||||| |||| ||||| | || |||||||||||    
T  34864174 ttttcttcattttgtattgtctacaaaaaccttctaagaaccattgacttcaatct 34864229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 27303071 - 27302975
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| ||| || |||| |||||| |||| |||||    
T  27303071 ttttcgtcccgttttcgatcgttcttccgtctgaaaactcctaggaacttaaaatgaattttcttcactttataatgtcttcaaaaaccttctaaga 27302975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 258
Target Start/End: Complemental strand, 15192860 - 15192640
Alignment:
Q  37 caacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgccttt 136  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||| | | | | || |||||| | ||||| |||| |||||||| || ||||||     
T  15192860 caacatacatcataacaaaacaatagaaaaacacaccctggagagaacaagagaacg-aagaatccttccttgaagctctaatgcttgacccttgccttg 15192762  T
Q  137 aactgtcaa-ctttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgatttttgca 235  Q
    | | |||||  ||||||||||||| |||||| || ||||  |||||  |||||| ||||||||||||||| || |||| ||||||||   | ||||||||    
T  15192761 atc-gtcaatgtttctgaatgaataataatgggtacaagaatctctatttatagaaaatgattacttagagtttaagagaagaaaactgagctttttgca 15192663  T
Q  236 ctgatccaacttggaaaacaagc 258  Q
    |  ||||| |||| |||||||||    
T  15192662 ccaatccaccttgaaaaacaagc 15192640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 5676501 - 5676398
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| ||||| ||||||||||||| |||||||||||| |||||| |||| ||||  ||||||||||| ||||| |||||||||| |||||| |||| |    
T  5676501 tcttgcgttttcgtcccgttttcgattgttcttccgtctagaaactcctagtaactcgaaatgaattttcttcatcttgtattgtcttcaaaaaccttct 5676402  T
Q  423 aaga 426  Q
    ||||    
T  5676401 aaga 5676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 443
Target Start/End: Complemental strand, 18898294 - 18898163
Alignment:
Q  312 gaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctc 411  Q
    ||||||| || |||||||||||  || ||||||||||||||||| |||||| ||| | |||||||||| ||||||||||| || | ||||||||||  ||    
T  18898294 gaggtgcaaattcttgcatttttctctcgttttcgatcgttcttacgtctgaaaaatcctaggaacttgaaatgaattttctttactttgtattgtattc 18898195  T
Q  412 aaaagccttttaagagcgatagacttcaatct 443  Q
    |||| |||||||||| | |  |||||||||||    
T  18898194 aaaaaccttttaagaaccactgacttcaatct 18898163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 426
Target Start/End: Original strand, 17026480 - 17026613
Alignment:
Q  293 ggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttta 392  Q
    ||||||| ||||| ||  ||| |||||||||||| | ||||  |||| ||||  || ||||||||||||||||||| |||||||||| |||| ||||||     
T  17026480 ggcgcctaaggcagcccctgatgtgcgaaatctttcgtttttctcccattttttattgttcttccgtctggaaactcctaggaacttgaaattaattttc 17026579  T
Q  393 ttcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||| ||||||||||| |||||| | ||||||||    
T  17026580 ttcactttgtattgtcttcaaaaactttttaaga 17026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 17024403 - 17024571
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| |||| ||||||||| ||| | ||| ||||||||  ||||||||||||| | | | ||| ||||| ||| ||| | ||| ||||||||| || |    
T  17024403 tcatggaaacaaacatcataataaagctatagaaaaacatttcctagagagaacaagagaaagaagaaatcttgccttggagctccgatgcttgaccctt 17024502  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatta 199  Q
    ||||| ||| |||||  |||||||||||| |||||||||| ||||||||||  ||||||  ||||||||    
T  17024503 gccttgaaccgtcaatgttctgaatgaataataatgagtgtaagggtctctatttatagtgaatgatta 17024571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 447
Target Start/End: Original strand, 47024569 - 47024703
Alignment:
Q  313 aggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctca 412  Q
    ||||||||| |||||||||||    | |||||||||||||||||| |||| ||||| |||||||||| |||| |||| | |||| |||||| |||  |||    
T  47024569 aggtgcgaattcttgcatttttcctctgttttcgatcgttcttccatctgaaaactcctaggaacttgaaataaattctcttcactttgtactgttttca 47024668  T
Q  413 aaagccttttaagagcgatagacttcaatcttcat 447  Q
    ||| |||| ||||| | || |||||||||||||||    
T  47024669 aaaaccttctaagaaccattgacttcaatcttcat 47024703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 447
Target Start/End: Original strand, 12111129 - 12111265
Alignment:
Q  311 tgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcct 410  Q
    |||||||| ||||||||  | |||||| ||||||||||| |||||| || || ||||| |||| ||||| ||||||||||| |||| |||||||| || |    
T  12111129 tgaggtgcaaaatcttgagtattcatctcgttttcgatcattcttctgtttgaaaactcctagaaacttgaaatgaattttcttcactttgtattatctt 12111228  T
Q  411 caaaagccttttaagagcgatagacttcaatcttcat 447  Q
     |||| |||| ||||| | || ||||||||| |||||    
T  12111229 aaaaaaccttataagaaccattgacttcaatattcat 12111265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 15192497 - 15192401
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||||||||||||||||||||||||||  ||||| |||||||||| ||||||||| | |||| |||| |||||| |||| | |||| |||||    
T  15192497 ttttcgtcccgttttcgatcgttcttccgtctaaaaactcctaggaacttgaaatgaattgtcttcactttgaattgtcttcaacaaccttctaaga 15192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 10577096 - 10577034
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| | ||||||    
T  10577096 catggcaacaaacatcattacaaaacaatataaaaacataccctagagaggacaagaggagga 10577034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 18898622 - 18898524
Alignment:
Q  37 caacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgcctt 135  Q
    ||||||||||||||||||||||||| ||||||||| | |||||| |||| | | ||||| ||||| | | ||||||||||||| ||||| || ||||||    
T  18898622 caacatacatcataacaaaacaatagaaaaacataacttagagaaaacaagggaaggaagaaatctttccttgaaactctgatacttgacccttgcctt 18898524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 51884887 - 51884819
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgt 407  Q
    |||||||||||||||||||||||| |||||  ||||||||| |||| |||||| |||| ||||||||||    
T  51884887 cgttttcgatcgttcttccgtctgaaaactcataggaacttgaaattaattttcttcactttgtattgt 51884819  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 1695684 - 1695763
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||||| ||| || ||||| |||||||||| |||||||||||||||| ||||||||||| |||| | |||| |||||    
T  1695684 atcgttctttcgtttgtaaactcctaggaacttgaaatgaattttattcactttgtattgtcttcaacaaccttctaaga 1695763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 5906576 - 5906679
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||||||||| ||  ||||||||||||||||| ||||||||| || || ||| || ||||||||||| || | |||||||| || |||||| |||| |    
T  5906576 tcttgcattttcgtcatgttttcgatcgttcttctgtctggaaatttttatgaatttgaaatgaattttcttaactttgtattatcttcaaaaaccttct 5906675  T
Q  423 aaga 426  Q
    ||||    
T  5906676 aaga 5906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 10320055 - 10320118
Alignment:
Q  344 tcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgt 407  Q
    ||||||||||| || |||||||||| |||||||||| |||| |||||| |||| ||||||||||    
T  10320055 tcgatcgttctaccttctggaaactcctaggaacttgaaataaattttcttcactttgtattgt 10320118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 18898446 - 18898395
Alignment:
Q  228 tttttgcactgatccaacttggaaaacaagctgcatgcaatttctgtccgca 279  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||| |||||    
T  18898446 tttttgcactgatctagcttggaaaacaagttgcatgcaatttctgcccgca 18898395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 5676825 - 5676767
Alignment:
Q  36 gcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||||||| ||||||||||| ||||||||||| |||| |||||| | ||||||    
T  5676825 gcaacatacatcattacaaaacaatagaaaaacataccatagaaagaacaagaggagga 5676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 34863890 - 34863979
Alignment:
Q  184 ttatagcaaatgattacttagatttgaagataagaaaaccacgatttttgcactgatccaacttggaaaacaagctgcatgcaatttctg 273  Q
    |||||||||||||||||| ||  || ||||  |||||||   | ||||||||  |||||| |||| ||||||||||||||||||||||||    
T  34863890 ttatagcaaatgattactcagggtttaagagtagaaaactgagttttttgcatcgatccagcttgaaaaacaagctgcatgcaatttctg 34863979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 25314725 - 25314772
Alignment:
Q  38 aacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||||||    
T  25314725 aacaaacatcataagaaaacaatagaaaaacataccctagacagaaca 25314772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 25315069 - 25315148
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||||||||| ||||||||  ||||||||| ||||||||||  || || |||||||||| |||| | | ||||||||    
T  25315069 atcgttcttccgtatggaaactcttaggaacttgaaatgaatttactttatcttgtattgtcttcaacaacattttaaga 25315148  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 1695379 - 1695433
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||| ||||| ||||| | ||||||||||| ||||||||||||| |||||||||    
T  1695379 tcatgacaacaaacatcgtgacaaaacaatagaaaaacataccctcgagagaaca 1695433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 12806445 - 12806487
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||    
T  12806445 acatcataacaaaacaatagaaaaatatatcctagagagaaca 12806487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 19602415 - 19602361
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||| |||| ||||    
T  19602415 tcatggcaaccgacatcattacaaaacaatagaaaaacataccctcgagataaca 19602361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 26188389 - 26188328
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||| |||||||| | ||||||    
T  26188389 catgacaacatacatcgtaacaaaacaata-gaaaacataccctatagagaacaagaggagga 26188328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 29438049 - 29438007
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||    
T  29438049 acatcattacaaaacaatagaaaaacataccctagagataaca 29438007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 9782582 - 9782627
Alignment:
Q  38 aacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    |||||||||||||||||||||||| | ||| |||||||||| ||||    
T  9782582 aacatacatcataacaaaacaatagacaaatataccctagaaagaa 9782627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 12110807 - 12110994
Alignment:
Q  34 tggcaacatacatcataacaaa-acaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgc 132  Q
    |||||||| ||||||||||| | | |||| ||||| |||||||| |||||||| |  ||||||  |||| |||  |  ||||||||||||| |  | | |    
T  12110807 tggcaacaaacatcataacacataaaatagaaaaa-ataccctatagagaacaagaagaggaagcaatcttgccatccaactctgatgcttaacactttc 12110905  T
Q  133 ctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaa 221  Q
    ||| ||| ||||||||| ||||||||  |||||||||||||| || |||  |||||  |||||||| |||||  || |||| |||||||    
T  12110906 cttgaaccgtcaactttttgaatgaaaaataatgagtgcaagcgtatctatttatattaaatgatttcttagggtttaagagaagaaaa 12110994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 426
Target Start/End: Original strand, 16052098 - 16052193
Alignment:
Q  331 tttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||||||||||||||||| |||||||||||| |||||| | |||||||| ||||||||||| |||||||||||||||| |||||| |||| |||||    
T  16052098 tttcatcccgttttcgattgttcttccgtctagaaactccaaggaacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttctaaga 16052193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 447
Target Start/End: Original strand, 28901141 - 28901287
Alignment:
Q  301 aggcatccattgaggtgcgaaatcttgc-attttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattt 399  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||  || |||||||||||| |||||| |||||| ||| ||||||||||| |||| ||    
T  28901141 aggcatccattgaggtgcgaattcttgctattttc-tcccgttttttattgttcttccgtctagaaactcctaggagcttgaaatgaattttcttcactt 28901239  T
Q  400 tgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    ||||||||| ||| || |||| ||||| | || || ||||||||||||    
T  28901240 tgtattgtcttcagaaaccttataagaaccattgaattcaatcttcat 28901287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 28902390 - 28902287
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| ||||| |||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||||| |||| | |||| |    
T  28902390 tcttgcgttttcgtcccgttttcaatcgttctttcgtctgaaaactcctaggaacttaaaatgaattttattcactttgtattgtcttcaataaccttct 28902291  T
Q  423 aaga 426  Q
    ||||    
T  28902290 aaga 28902287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 426
Target Start/End: Complemental strand, 16054605 - 16054492
Alignment:
Q  313 aggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctca 412  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||| |||| |||||||| || |||    
T  16054605 aggtgcgatttcttgcgttttcttcccgttttcgatcgttcttttgtctggaaactcctaggaacttgaaatgaattttcttcactttgtattttcttca 16054506  T
Q  413 aaagccttttaaga 426  Q
    | | |||| |||||    
T  16054505 acaaccttctaaga 16054492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 22892714 - 22892880
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatata--aaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaacc 128  Q
    ||||||||||| |||||| ||||||| || |||  |||||||||||||||||||||| | | ||||| ||||||| | ||||||||||||||||||| ||    
T  22892714 tcatggcaacagacatcagaacaaaaaaaaatagaaaaacataccctagagagaacaagagaaggaagaaatccttccttgaaactctgatgcttgaccc 22892813  T
Q  129 atgcctttaactgtcaactttctgaatgaatgataatg-agtgcaagggtctctcattatagcaaat 194  Q
     |||||| ||| |||    |||||||||||  |||||| ||||||||||| |||   ||||||||||    
T  22892814 ttgccttgaaccgtccgtgttctgaatgaaaaataatgaagtgcaagggtttctatatatagcaaat 22892880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 293 - 447
Target Start/End: Original strand, 11310040 - 11310193
Alignment:
Q  293 ggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttta 392  Q
    ||||||||||| | ||  | |||| |||| |||||| ||||| | |||||||||||||||||||||||| |||||| |||||||||| |||| ||||||     
T  11310040 ggcgcctgaggtagcctctaaggtacgaattcttgcgttttccttccgttttcgatcgttcttccgtctagaaactcctaggaacttgaaat-aattttc 11310138  T
Q  393 ttcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    |||| ||||||||||  |||||| |||| |||||   || ||||| |||||||||    
T  11310139 ttcactttgtattgttttcaaaaaccttctaagaatcattgacttaaatcttcat 11310193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 258
Target Start/End: Original strand, 15213234 - 15213458
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||| |||| |||||||||||||| |||  |||||||||||||||| |||||| | ||||||    ||   || ||||||||||||||| ||| || |    
T  15213234 tcatggaaacaaacatcataacaaaataattgaaaaacataccctagaaagaacatgaggaggatgggat---gccttgaaactctgatgcatgaccctt 15213330  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgattt 230  Q
    ||||| ||| |  | |||||||||||||  ||||||  | | |||||||||  |||||||| |||||||||||   ||||||| ||||||||   | |||    
T  15213331 gccttgaaccgctagctttctgaatgaaaaataatgtatcctagggtctctatttatagcatatgattacttatggttgaagagaagaaaactgagcttt 15213430  T
Q  231 ttgcactgatccaacttggaaaacaagc 258  Q
    ||||||  ||| | ||||||||||||||    
T  15213431 ttgcaccaatcaagcttggaaaacaagc 15213458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 426
Target Start/End: Original strand, 13081755 - 13081851
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||||||||| ||||||||||  |||| ||||||  ||| ||||| ||||||||||| |||||||||||||||| |||| | |||| |||||    
T  13081755 ttttcttcccgtttttgatcgttcttttgtctagaaactcatagaaacttgaaatgaattttcttcattttgtattgtcttcaacaaccttctaaga 13081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 28900804 - 28900888
Alignment:
Q  36 gcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatg 120  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||   | ||||| ||||||| | ||||| ||||||||    
T  28900804 gcaacagacatcataacaaaacaatagaaaaacatatcctagagagaacacaagaaggaagaaatcctaccttgaagctctgatg 28900888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 444
Target Start/End: Original strand, 22894336 - 22894466
Alignment:
Q  313 aggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctca 412  Q
    |||||||||||||||  ||||  ||||||| |  |||||||||| |||||||| || || ||||||| ||| ||||||| |||| ||||||||||| |||    
T  22894336 aggtgcgaaatcttgtgtttttctcccgttctttatcgttcttctgtctggaa-ctccttggaacttcaaaagaattttcttcactttgtattgtcttca 22894434  T
Q  413 aaagccttttaagagcgatagacttcaatctt 444  Q
    ||| || | ||||| | || || |||||||||    
T  22894435 aaaaccatctaagaacaattgaattcaatctt 22894466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 23893737 - 23893682
Alignment:
Q  30 atcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||||||||| ||||||||||||||| || ||| ||| ||||||||||||    
T  23893737 atcatggcaacatacaacataacaaaacaatagaataacctactctagagagaaca 23893682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 24120501 - 24120422
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||||||||||||||||||| | |||||||||| ||||||||||| ||||| || |||| || || ||| |||| |||||    
T  24120501 atcgttcttccgtctggaaattcctaggaacttgaaatgaattttcttcatcttttattatcttcgaaaaccttctaaga 24120422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 29047154 - 29047257
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| ||||| ||||||||||||||||||||  |  ||||||||  |||||||||| | ||  |||| ||||||||| |||||| |||||| |||| |    
T  29047154 tcttgcgttttcttcccgttttcgatcgttcttttgcttggaaactcataggaacttagattggtttttcttcattttgcattgtcttcaaaaaccttat 29047253  T
Q  423 aaga 426  Q
    ||||    
T  29047254 aaga 29047257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 420
Target Start/End: Complemental strand, 5154052 - 5153962
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctt 420  Q
    ||||| |||| ||||||| | ||||||||||| | ||  ||| ||||||| ||||||||||||||||| || ||||||| |||||| ||||    
T  5154052 ttttcgtccctttttcgagcattcttccgtcttgcaatgtcttggaacttgaaatgaattttattcatgttatattgtcttcaaaaacctt 5153962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 16051775 - 16051829
Alignment:
Q  32 catggcaacatacatcataacaaaacaata-taaaaacataccctagagagaaca 85  Q
    |||||||||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  16051775 catggcaacaaacatcataacaaaacaatagaaaaaacatatcctagagagaaca 16051829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 23876582 - 23876529
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||| |||||||||||| ||||||||||| ||||||||||| |||| ||||||    
T  23876582 catggaaacatacatcattacaaaacaatagaaaaacataccgtagatagaaca 23876529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 13305036 - 13304984
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||  ||||||||| ||||||||| ||||| |||||||||||||||||    
T  13305036 atggcaaccgacatcataagaaaacaatagaaaaatataccctagagagaaca 13304984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 18771572 - 18771517
Alignment:
Q  30 atcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||||  ||||||| ||||||||||| ||||| |||| ||||||||||||    
T  18771572 atcatggcaaccgacatcattacaaaacaatagaaaaagatactctagagagaaca 18771517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 391
Target Start/End: Complemental strand, 24696871 - 24696816
Alignment:
Q  336 tcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttt 391  Q
    ||||||||||||||||| |||||||| |||| | |||| ||||| |||||||||||    
T  24696871 tcccgttttcgatcgtttttccgtctagaaaatcctagaaacttgaaatgaatttt 24696816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 12957135 - 12957093
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||||||||| || |||||||||||||| ||||||||    
T  12957135 acatcataacaaaacattagaaaaacataccctatagagaaca 12957093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 24927344 - 24927394
Alignment:
Q  44 catcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||| ||||||||||| |||||||||||||| |||||||| | ||||||    
T  24927344 catcattacaaaacaatagaaaaacataccctaaagagaacaaggggagga 24927394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 30850549 - 30850583
Alignment:
Q  51 acaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||| |||||||||||||||||||||||    
T  30850549 acaaaacaatagaaaaacataccctagagagaaca 30850583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 5569981 - 5570038
Alignment:
Q  351 ttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtc 408  Q
    |||||||||||| ||||| ||| ||| || ||||||||||| ||||| ||||||||||    
T  5569981 ttcttccgtctgaaaactcctatgaagttgaaatgaattttcttcatcttgtattgtc 5570038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 11438037 - 11437984
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||| || ||||||||| |||| |||||| |||||||||||||| ||||||||    
T  11438037 catggaaatatacatcattacaagacaataaaaaaacataccctacagagaaca 11437984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 12774340 - 12774393
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| | |||||| ||||||||||| |||||||||  ||||||||||||    
T  12774340 catggcaaccttcatcattacaaaacaatagaaaaacataatctagagagaaca 12774393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 14976952 - 14977017
Alignment:
Q  350 gttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    |||||||||||||||||||||||| | ||| |||| ||||||  ||| |||||||| || ||||||    
T  14976952 gttcttccgtctggaaacttctagaagcttgaaattaattttcatcactttgtattatcttcaaaa 14977017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 28902588 - 28902527
Alignment:
Q  197 ttacttagatttgaagataagaaaaccacgatttttgcactgatccaacttggaaaacaagc 258  Q
    ||||||||  || |||| |||||||| | | ||| |||||||||||||||||||||||||||    
T  28902588 ttacttagggtttaagagaagaaaactaggctttatgcactgatccaacttggaaaacaagc 28902527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 26853277 - 26853238
Alignment:
Q  45 atcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  26853277 atcataagaaaacaata-aaaaacataccctagagagaaca 26853238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 442
Target Start/End: Complemental strand, 24842090 - 24841935
Alignment:
Q  287 acaaacggcgcctgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatga 386  Q
    ||||| ||||||||||||||||  ||||||| |||||||||  ||||  | |||||||  ||||||||  |||||||||||| |||||||| | ||||||    
T  24842090 acaaatggcgcctgaggcatcccctgaggtgagaaatcttgtgtttttcttccgttttttatcgttctgtcgtctggaaactcctaggaacatgaaatga 24841991  T
Q  387 attttattcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatc 442  Q
    ||||| |||||||||| ||||| |||||| |||| ||||| | || ||||||||||    
T  24841990 attttcttcattttgtgttgtcttcaaaatccttctaagaaccattgacttcaatc 24841935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 447
Target Start/End: Original strand, 26329879 - 26330007
Alignment:
Q  319 gaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcc 418  Q
    |||||||||| ||||  ||||| ||| ||||||||||||||||| ||||| |||||||||| ||||||||||| |||| ||||||||||| | |||| ||    
T  26329879 gaaatcttgcctttttctcccgcttttgatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttaaaaaacc 26329978  T
Q  419 ttttaagagcgatagacttcaatcttcat 447  Q
    || ||||  | || |||||||||||||||    
T  26329979 ttctaaggaccattgacttcaatcttcat 26330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 258
Target Start/End: Original strand, 12265092 - 12265307
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgcctttaactgt 142  Q
    ||||||| ||||||||||| ||||| |||| |||||||||||| | | ||||| ||||||| | ||||||||||||||||||| |  | |||| ||| |     
T  12265092 acatcattacaaaacaatagaaaaatatacactagagagaacaagagaaggaagaaatcctaccttgaaactctgatgcttgaccattaccttgaaccgc 12265191  T
Q  143 caactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgatttttgcactgatcc 242  Q
       |||||| ||||||| ||| || |||||||| ||||| |||||||||||| ||||||||   || || | ||||||||   |||||||||||  ||||    
T  12265192 tggctttctaaatgaataatattgtgtgcaaggatctcttattatagcaaataattacttaaggtttaaaagaagaaaactgagatttttgcacatatcc 12265291  T
Q  243 aacttggaaaacaagc 258  Q
    | |||| |||||||||    
T  12265292 agcttgaaaaacaagc 12265307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 26329531 - 26329635
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | | | | ||||| ||||||||| ||||| |||| |||||||| || |    
T  26329531 tcatggcaacaaacatcataacaaaacaatagaaaaacataccctagagaggataagagaaggaagaaatcctgccttgaagctctaatgcttgaccctt 26329630  T
Q  131 gcctt 135  Q
    |||||    
T  26329631 gcctt 26329635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 24268730 - 24268676
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  24268730 tcatggcaatatacatcataacaaaacaatataaaaacataccctaaagagaaca 24268676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 24345360 - 24345306
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  24345360 tcatggcaatatacatcataacaaaacaatataaaaacataccctaaagagaaca 24345306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 447
Target Start/End: Complemental strand, 17027833 - 17027704
Alignment:
Q  318 cgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagc 417  Q
    ||||||||  |||||||||||  ||||||||||||||| ||| |||||||| ||||||| || |||| |||||| |||| ||||||||||| |||| | |    
T  17027833 cgaaatctaacattttcatccttttttcgatcgttctttcgtatggaaactcctaggaaattgaaattaattttcttcactttgtattgtcttcaagaac 17027734  T
Q  418 cttttaagagcgatagacttcaatcttcat 447  Q
    ||| |||||   ||  ||||||||||||||    
T  17027733 cttctaagaagcattaacttcaatcttcat 17027704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 17028903 - 17028793
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatg 131  Q
    ||||| |||||||||||| ||||| ||||| ||||| |||||||| |||||||| |   ||||| |||| |||||||||| |||||||| |||| || ||    
T  17028903 catggtaacatacatcattacaaatcaatagaaaaatataccctaaagagaacaaggtaaggaagaaatactgcattgaagctctgatgtttgacccttg 17028804  T
Q  132 cctttaactgt 142  Q
    |||| ||||||    
T  17028803 ccttgaactgt 17028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 18452627 - 18452681
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaactt 369  Q
    |||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  18452627 gtgcgaaatcttgcattttcgtcccgttttcgatcgttcttgcatctggaaactt 18452681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 16622514 - 16622582
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaa 415  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||| |||| ||||||||||| ||||||    
T  16622514 atcgttcttccatctggaaactcctacgaacttgaaatgaattttcttcaatttgtattgtcttcaaaa 16622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 407
Target Start/End: Complemental strand, 25680888 - 25680804
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgt 407  Q
    |||||| ||||| ||||||||||||| ||| ||||||||||||||| |||| ||| | ||||||||||| || | ||||||||||    
T  25680888 tcttgcgttttcgtcccgttttcgattgtttttccgtctggaaactcctagaaacctgaaatgaattttctttactttgtattgt 25680804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 20695267 - 20695216
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  20695267 catggcagcatacatcattacaaaacaatagaaaaacataccctagagagaa 20695216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 17381482 - 17381534
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| ||||||| | ||||||||||||| |||||||||||||||||||    
T  17381482 atggcaacaaacatcattataaaacaatataaatacataccctagagagaaca 17381534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 24517655 - 24517579
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaatttt 391  Q
    |||| ||||||||  ||||| |||| |||||||||||| || | |||||||||| |||||||||| |||||||||||    
T  24517655 gtgcaaaatcttgtgttttcctcccattttcgatcgttatttcatctggaaactcctaggaacttgaaatgaatttt 24517579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 25594129 - 25594192
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||| | ||||||    
T  25594129 tcattgcaacaaacatcataacaaaacaatagaaaaacatatcttagagagaacaagaggagga 25594192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 401
Target Start/End: Original strand, 25594497 - 25594583
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcg-atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttg 401  Q
    ||||||||||||||||| || |||||||||   || ||||||||||||||||||| ||||||||||  |||||||||| |||| ||||    
T  25594497 gtgcgaaatcttgcattctcgtcccgtttttttattgttcttccgtctggaaactcctaggaactt-gaatgaattttcttcactttg 25594583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 16622115 - 16622168
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||| ||||||||    
T  16622115 catgacaacatacgccataacaaaacaatagaaaaacataccctaaagagaaca 16622168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 20084122 - 20084081
Alignment:
Q  44 catcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  20084122 catcattacaaaataatataaaaacataccctagagagaaca 20084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 30072747 - 30072585
Alignment:
Q  38 aacatacatcataacaaaacaatataaaaacataccctagagaga-acaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgccttt 136  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||  || |  ||||    |||||||| ||||||||||||||||| | |    ||||     
T  30072747 aacaaacatcataacaaaacaatagaaaaatataccctagagagagtcaagatgaggttggaatcctgccttgaaactctgatgctttacc----ccttg 30072652  T
Q  137 aactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattactta 203  Q
    |||||  | |||| ||||||||  |||||| || |||||||||||  |||||  |||||||||||||    
T  30072651 aactgctagctttatgaatgaaaaataatgtgtacaagggtctctatttatattaaatgattactta 30072585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 22230089 - 22230049
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaactt 379  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  22230089 cgttttcgatcgttcttccgtctgaaaactcctaggaactt 22230049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 23157322 - 23157414
Alignment:
Q  89 ggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctct 181  Q
    ||||||| ||| ||| | ||||| ||||||||||||| || ||||||  |||| ||||||||||||||||| | |  | ||||||||||||||    
T  23157322 ggaggaagaaacccttccttgaagctctgatgcttgacccttgccttgtactgccaactttctgaatgaataaaatagtgtgcaagggtctct 23157414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 20715213 - 20715071
Alignment:
Q  37 caacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgccttt 136  Q
    ||||| |||||| |||||||||||| ||||||||| | || |||||||| | | ||| || |||| |||  |||| ||||||||||||| || || ||||    
T  20715213 caacaaacatcaaaacaaaacaatagaaaaacatatcatatagagaacaagagaagg-aagaatcttgctctgaagctctgatgcttgacccttgtcttt 20715115  T
Q  137 aactgtcaactttctgaatgaatgataatgagtgcaagggtctc 180  Q
    |||  ||||  |||| ||||||| || ||| || ||||||||||    
T  20715114 aaccatcaatgttctaaatgaattattatgtgttcaagggtctc 20715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 30072393 - 30072314
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||||||||| |||||||   || |||||| ||||||| ||| |||| ||||||||||| | |||| ||||||||||    
T  30072393 atcgttcttccgtttggaaacgcatacgaacttgaaatgaaatttcttcactttgtattgtctttaaaaaccttttaaga 30072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 11274160 - 11274234
Alignment:
Q  340 gttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaa 414  Q
    |||||| ||||||||||||  || ||||| |||||||||| ||||||| |||  |||| |||||||||| |||||    
T  11274160 gttttcaatcgttcttccgcatgaaaactcctaggaacttgaaatgaaatttcatcatcttgtattgtcttcaaa 11274234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 24842322 - 24842268
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||| ||||||| ||||||||||||||||| |||| |||||  |||||||||||    
T  24842322 tcatgacaacatatatcataacaaaacaatagaaaagcatactatagagagaaca 24842268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 22930594 - 22930549
Alignment:
Q  40 catacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||| ||||||||||| ||||||||| |||||||| ||||    
T  22930594 catacatcattacaaaacaatagaaaaacataacctagagataaca 22930549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 273
Target Start/End: Complemental strand, 9071057 - 9070820
Alignment:
Q  36 gcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccatgcctt 135  Q
    |||||||  ||||||||||||||||| ||||||||||| ||||||||| | | | ||||| ||||| ||| ||||| |||||||||||||    | ||||    
T  9071057 gcaacatcaatcataacaaaacaatagaaaaacataccttagagagaagaagagaaggaagaaatcatgccttgaagctctgatgcttgacattttcctt 9070958  T
Q  136 taactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaaccacgatttttgca 235  Q
     ||| |||    || ||||||||| ||||| |||||||||||||||  |||||| ||| |||||||||| ||| |||| ||||||     | ||||||||    
T  9070957 gaaccgtcggtgttttgaatgaataataataagtgcaagggtctctatttatagaaaaggattacttaggttttaagagaagaaatttgtgctttttgca 9070858  T
Q  236 ctgatccaacttggaaaacaagctgcatgcaatttctg 273  Q
    |  ||||| ||||  ||| |||||||| ||||||||||    
T  9070857 ccaatccagcttgccaaataagctgcaggcaatttctg 9070820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 7142688 - 7142520
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||||||||||||| |||| |||| | || ||||| ||||||||||||||||| | | ||||| ||||| ||| ||||| |||| ||| |||| |  |    
T  7142688 tcatggcaacatacattataataaaatattacaaaaatataccctagagagaacaagagaaggaagaaatcttgccttgaagctctaatgtttgaccttt 7142589  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatta 199  Q
    | ||| ||| ||||   |||| ||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  7142588 gtcttgaaccgtcagtgttctaaatgaataataatgagtgcaagagtctctatttatagcaaatgatta 7142520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 29544805 - 29544718
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||||| ||||||||||||||||| ||||| |||||||||| ||||||||||| |||| ||||||||||| |||||| |||| |||||    
T  29544805 cgtttttgatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaaga 29544718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 10670013 - 10670180
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||| ||| |||||||||||| ||||||  || |||||||| |||||||| | | | ||| ||||||||| ||||| | |||||| |||| || |    
T  10670013 tcatggcaatatatatcataacaaaataatatatgaatataccctaaagagaacaagagaacgaataaatcctgccttgaagccctgatgtttgaccctt 10670112  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatt 198  Q
    || || |||  ||||  || ||||||||  |||||||||||||||||||||  |||||| ||||||||    
T  10670113 gctttgaaccatcaatgttttgaatgaaaaataatgagtgcaagggtctctatttatagaaaatgatt 10670180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 426
Target Start/End: Original strand, 20470615 - 20470726
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaa 414  Q
    |||||||||||| | |||||||   ||||||||||||||||| |||||||||||  || |||||| |||| |||||| |||||||||||||||| ||||     
T  20470615 gtgcgaaatcttacgttttcatattgttttcgatcgttcttctgtctggaaactcatacgaacttgaaatcaattttcttcattttgtattgtcttcaag 20470714  T
Q  415 agccttttaaga 426  Q
    | |||| |||||    
T  20470715 aaccttctaaga 20470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 315450 - 315384
Alignment:
Q  347 atcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaa 413  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||||||||| ||||    
T  315450 atcgttctttcgtctggaaactcctaggaacttgaaatgaattttattcactttgtattgtcttcaa 315384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 4091965 - 4092157
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaa-atcct--gcattgaaac-tctgatgcttgaacc 128  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| | ||| ||   | |||||  || ||| ||| |||||||||||| ||    
T  4091965 atggcaacatacattataacaaaacaatagaaaaacatacc-tagagagaacaagaggaagatggagatcctctgccttggaacctctgatgcttgaccc 4092063  T
Q  129 atgcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttagatttgaagataagaaaac 222  Q
     |||||| ||| |  | |||||||||||||| |||||| ||| ||||||||||  ||||| || |||||||||||| | ||||||  |||||||    
T  4092064 ttgccttcaaccgctagctttctgaatgaataataatgtgtgaaagggtctctatttataacatatgattacttaggtctgaagagtagaaaac 4092157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 9801703 - 9801812
Alignment:
Q  338 ccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagactt 437  Q
    |||||||||||||||||||| | || ||||| |||||||||| |||| ||||||  ||| |||||||| || | |||| |||||||||| | || |||||    
T  9801703 ccgttttcgatcgttcttccatttgaaaactcctaggaacttgaaataaattttcctcactttgtattttctttaaaaaccttttaagaaccattgactt 9801802  T
Q  438 caatcttcat 447  Q
    ||||||||||    
T  9801803 caatcttcat 9801812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 23126761 - 23126603
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||| | ||||||||||||||||||| ||||||| |||||||||||| ||   ||||||   |||| ||| ||||||||||||||||||| || |    
T  23126761 tcatggcaataaacatcataacaaaacaatagaaaaacaaaccctagagagagca--aggaggatcgaatcatgccttgaaactctgatgcttgaccctt 23126664  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagca 191  Q
     |||  |||    |||||||||||| ||  |||||||||||||| ||||||  ||||||||    
T  23126663 tcctagaaccactaactttctgaataaaaaataatgagtgcaagtgtctctatttatagca 23126603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 413
Target Start/End: Complemental strand, 7815606 - 7815534
Alignment:
Q  341 ttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaa 413  Q
    |||||||||||||||||||||| ||||| ||| |||||| ||||||||||| |||| ||||||||||| ||||    
T  7815606 ttttcgatcgttcttccgtctgaaaactcctatgaacttgaaatgaattttcttcactttgtattgtcttcaa 7815534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 414
Target Start/End: Original strand, 21545636 - 21545731
Alignment:
Q  319 gaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaa 414  Q
    |||||||||| ||||||||| ||||||| |  ||||| |||||||||||| |||| ||||| ||||||||||| |||| ||| ||||||| |||||    
T  21545636 gaaatcttgcgttttcatcctgttttcggttattctttcgtctggaaactcctagaaacttgaaatgaattttcttcactttttattgtcttcaaa 21545731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 7493917 - 7493863
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  7493917 tcatggcaacatacatcataaaataacaatagaaaaacataccctagagagaaca 7493863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 7777568 - 7777622
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  7777568 tcatggcaacaaacatcataataaaacaatagaaaaacataccctagagagaaca 7777622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 9405335 - 9405477
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||||||||||||||||||||||||| |||| |||||    ||||||||| | | ||||| ||||||||| ||||| |||||| | |||| || |    
T  9405335 tcatggcaacatacatcataacaaaacaatagaaaatcatac----gagagaacaagagaaggaataaatcctgccttgaagctctgacgtttgaccctt 9405430  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggt 177  Q
    | ||| ||| || |   |||||||||||  ||||||||| |||||||    
T  9405431 gtcttgaaccgttattgttctgaatgaaaaataatgagttcaagggt 9405477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 21472106 - 21472029
Alignment:
Q  313 aggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattt 390  Q
    ||||||||  |||||| ||||| ||| |||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  21472106 aggtgcgatttcttgcgttttcgtcctgttttcgatcgttcttccgtatgaaaactcctaggaacttgaaatgaattt 21472029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21545344 - 21545385
Alignment:
Q  44 catcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21545344 catcataacaaaacaatataaaaacataccctagagagaaca 21545385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 7815946 - 7815843
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||| |||||   | ||| | | ||||||| || |||||||||||||||| || |    
T  7815946 tcatggcaacatacatcacaagaaaacaatagaaaaacataccctagagtgaacaaaagaagg-atatatcctgccttaaaactctgatgcttgaccctt 7815848  T
Q  131 gcctt 135  Q
    |||||    
T  7815847 gcctt 7815843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 20446851 - 20446807
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccct 75  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  20446851 tcatggcaacatacatcataacaaaacaatagaaaaacataccct 20446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 20017237 - 20017130
Alignment:
Q  340 gttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttca 439  Q
    ||||||||  |||||| ||| || ||||| |||||||||| ||||||||||| |||| ||||||||||| |||| | |||| ||||| | || || ||||    
T  20017237 gttttcgactgttctttcgtttgtaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaagaaccttctaagaaccattgagttca 20017138  T
Q  440 atcttcat 447  Q
    ||||||||    
T  20017137 atcttcat 20017130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 2630001 - 2630047
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctag 77  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2630001 tcatggcaacaaacatcataacaaaacaaaataaaaacataccctag 2630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 20040299 - 20040345
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctag 77  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  20040299 tcatggaaacatacatcataacaaaacaaaataaaaacataccctag 20040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 21472419 - 21472365
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||    
T  21472419 tcatggcaacatacatcatatgaaaacaatagaaaaacatatcctagagagaaca 21472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 3400465 - 3400412
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||| | | |||||||||||||||||||||||||||||||||||| ||||    
T  3400465 catggcaataaaaatcataacaaaacaatataaaaacataccctagagaaaaca 3400412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 7494977 - 7494912
Alignment:
Q  343 ttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtc 408  Q
    |||||||||||||||||||||||||| |||| | ||| |||| |||||| |||| |||||||||||    
T  7494977 ttcgatcgttcttccgtctggaaactcctagaatcttgaaataaattttcttcactttgtattgtc 7494912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 7151513 - 7151461
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||| ||||    
T  7151513 tcatggcaacatgcatcataacaatataatataaaaacataccctagacagaa 7151461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 447
Target Start/End: Original strand, 10670404 - 10670512
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttc 438  Q
    |||||| | ||| ||||||||||| ||||| ||| |||||| |||||| ||||||||| ||||||||||| |  ||| |||| ||||| | || ||||||    
T  10670404 cgtttttggtcgatcttccgtctgaaaactcctacgaacttgaaatgatttttattcactttgtattgtcttagaaaaccttctaagaaccattgacttc 10670503  T
Q  439 aatcttcat 447  Q
     ||||||||    
T  10670504 gatcttcat 10670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 315764 - 315717
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctaga 78  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  315764 tcatggcaacatacatcataacaaagcaatagaaaaacataccataga 315717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 1074736 - 1074651
Alignment:
Q  341 ttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||||||||||||||| ||||  ||| ||||||| |||| | |||| ||||| |||||||||| |||| | ||||||||||    
T  1074736 ttttctatcgttcttccgtcttgaaatgtcttggaacttgaaattacttttcttcatcttgtattgtcttcaacaaccttttaaga 1074651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 26839677 - 26839717
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacata 71  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  26839677 tcatggcaacaaatatcataacaaaacaatataaaaacata 26839717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 4977687 - 4977758
Alignment:
Q  376 acttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    |||| ||||||||||| ||||||||||||| || ||||||| ||| ||| | | |||| |||||||||||||    
T  4977687 acttcaaatgaattttgttcattttgtattttcttcaaaagtcttctaaaaaccatagccttcaatcttcat 4977758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 5312266 - 5312317
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||||| ||||||||||  ||||||||||||||||||||||| | ||||||    
T  5312266 acatcattacaaaacaattgaaaaacataccctagagagaacaagaggagga 5312317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 5636844 - 5636790
Alignment:
Q  32 catggcaacatacatcataacaaaacaat-ataaaaacataccctagagagaaca 85  Q
    |||| ||||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  5636844 catgacaacatacatcattacaaaacaataagaaaaaaataccctagagagaaca 5636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 20050452 - 20050498
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctag 77  Q
    |||||| ||||||||||||||||| | || |||||||||||||||||    
T  20050452 tcatggaaacatacatcataacaacataaaataaaaacataccctag 20050498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 24596483 - 24596525
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||| | |||||||||||||||||||| ||||||||||||    
T  24596483 acatcattataaaacaatataaaaacatacactagagagaaca 24596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 17880419 - 17880472
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||| ||||||| |||||| ||||  |||||||||| |||||||||||    
T  17880419 catggcaacaaacatcattacaaaataataataaaacataccatagagagaaca 17880472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 20470250 - 20470306
Alignment:
Q  31 tcatggcaacatacat--cataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| ||||||  ||||||||||||| | |||| ||||||||||||||||||    
T  20470250 tcatggcaatatacatatcataacaaaacaaaagaaaagcataccctagagagaaca 20470306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 7142398 - 7142275
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| ||||| ||| |||||||||||||||||||||||  |  | ||||||||||  |||| ||||| || | |||||||| || |||||| ||| ||    
T  7142398 tcttgcgttttc-tccggttttcgatcgttcttccgtctgacatatcctaggaacttgcaatggattttctttaatttgtattctcttcaaaaacctatt 7142300  T
Q  423 aagagcgatagacttcaatcttcat 447  Q
    || | | || || ||||||||||||    
T  7142299 aaaaaccatcgaattcaatcttcat 7142275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 18468200 - 18468252
Alignment:
Q  33 atggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||| |  |||||| ||||||||| |||||||||||||| ||||||||    
T  18468200 atggcaacaaatgtcataagaaaacaatagaaaaacataccctaaagagaaca 18468252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 315 - 420
Target Start/End: Original strand, 27417068 - 27417173
Alignment:
Q  315 gtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaa 414  Q
    ||||||| |||||  ||||| |||||||||| |||||||||||||||||||||| || ||||||| ||||||||||| |||| ||||||||||  |||||    
T  27417068 gtgcgaattcttgagttttcgtcccgttttcaatcgttcttccgtctggaaactccttggaacttgaaatgaattttcttcactttgtattgttttcaaa 27417167  T
Q  415 agcctt 420  Q
    | ||||    
T  27417168 aacctt 27417173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 405
Target Start/End: Complemental strand, 1733392 - 1733310
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtatt 405  Q
    |||||||||| | ||| ||||||||| ||||||||||||| ||||| |||||||  |||||||||||||||||| ||||||||    
T  1733392 tcttgcatttacctcctgttttcgattgttcttccgtctgaaaactcctaggaatctaaaatgaattttattcactttgtatt 1733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 21842672 - 21842778
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatc--ctgcattgaaactctgatgcttgaacc 128  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||||||  | |||| |   |||||  |||| ||||| ||||||||||||||||    
T  21842672 catggcaacatacatcattacaaaacaatataaaagcataccctaaagagaacgagaggagcatgtaaatcatctgccttgaagctctgatgcttgaacc 21842771  T
Q  129 atgcctt 135  Q
    |||||||    
T  21842772 atgcctt 21842778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 426
Target Start/End: Complemental strand, 35708128 - 35708001
Alignment:
Q  299 tgaggcatccattgaggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcatt 398  Q
    ||||||| || || ||||||||  |||||  ||||| ||| |||||||||||||||| |||||| ||||| ||  |||||| |||| |||||| ||||||    
T  35708128 tgaggcagcccttcaggtgcgatttcttgtgttttcttcctgttttcgatcgttctttcgtctgaaaactcctgagaacttgaaataaattttgttcatt 35708029  T
Q  399 ttgtattgtcctcaaaagccttttaaga 426  Q
    |||||||||| |||| | |||| |||||    
T  35708028 ttgtattgtcttcaacaaccttctaaga 35708001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 30999408 - 30999354
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  30999408 tcatggcaacaaacatcataagaaaacaatagaaaaacataccctagagagaaca 30999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 25474331 - 25474235
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| |||| ||||| ||||||||| | |||||||||| |||||||| | ||||||||||| |||| ||| ||||||| |||| | |||| |||||    
T  25474331 ttttcttcccattttcaatcgttctttcatctggaaactactaggaacctgaaatgaattttcttcactttatattgtcttcaacaaccttctaaga 25474235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 25474643 - 25474591
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||    
T  25474643 tcatggcaacagacatcataacaaaacaatagaaaaagataccctagaaagaa 25474591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 9504552 - 9504489
Alignment:
Q  32 catggcaacatacatcataacaaaacaat-ataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||||||||| | ||||||    
T  9504552 catggcaacaaacatcataacaaaacaatggaaaaaacataccctagagagaacaagaggagga 9504489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 9515918 - 9515855
Alignment:
Q  32 catggcaacatacatcataacaaaacaat-ataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||||||||| | ||||||    
T  9515918 catggcaacaaacatcataacaaaacaatggaaaaaacataccctagagagaacaagaggagga 9515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 14921564 - 14921618
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||  ||||||| ||||||||||  |||||||||||||||||||||||    
T  14921564 tcatggcaaccgacatcattacaaaacaattgaaaaacataccctagagagaaca 14921618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 16593582 - 16593667
Alignment:
Q  341 ttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||||||| || || | ||| |||||| |||||||||| ||||||||||| |||| ||||||||||| |||| | |||| |||||    
T  16593582 ttttcgatcattatttcatctcgaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaaga 16593667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 1733740 - 1733688
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||| ||||||||||||||||||||||| | |||||||||| ||||| ||||    
T  1733740 tcatgacaacatacatcataacaaaacaaaagaaaaacatacactagaaagaa 1733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 17884041 - 17884147
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatc--ctgcattgaaactctgatgcttgaacc 128  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||| || ||| | ||| || | |||||  |||| ||||| ||||||||||||| ||    
T  17884041 catggcaaccaacatcattacaaaacaatagaaaaacataccctagaaaggacaagaggatgacagaaatcctctgccttgaatctctgatgcttgaccc 17884140  T
Q  129 atgcctt 135  Q
     ||||||    
T  17884141 ttgcctt 17884147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 18235789 - 18235839
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    |||||| |||||||||||| |||||||||| ||||||||||| |||||||||    
T  18235789 catggctacatacatcata-caaaacaatagaaaaacataccatagagagaa 18235839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 35708404 - 35708374
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaata 61  Q
    |||||||||||||||||||||||||||||||    
T  35708404 tcatggcaacatacatcataacaaaacaata 35708374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 18533014 - 18533066
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||||||| | ||||||||||||||||| | ||||| |||||||||| ||||    
T  18533014 tcatggcaatagacatcataacaaaacaaaagaaaaatataccctagacagaa 18533066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 19949345 - 19949417
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgt 402  Q
    ||||| |||||||| | || |||||| | |||| ||||| |||||||||| ||||||||||| |||| |||||    
T  19949345 ttttcttcccgtttccaattgttctttcatctgaaaactcctaggaacttgaaatgaattttcttcactttgt 19949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 25460545 - 25460505
Alignment:
Q  45 atcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||| ||||||||||| |||||||||| ||||||||||||    
T  25460545 atcattacaaaacaatagaaaaacatacactagagagaaca 25460505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 30999049 - 30998969
Alignment:
Q  346 gatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    |||||||||||||| || |||||  || |||||| ||||||||||| | || ||||||||||| |||| | |||| |||||    
T  30999049 gatcgttcttccgtttgaaaactcatatgaacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaaga 30998969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 8522 - 8624
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| ||||| |||||||||||||||||||||||| || ||| | |||||||||  ||||||||||  ||||| |||||||||| |||||| ||||||    
T  8522 tcttgcgttttcgtcccgttttcgatcgttcttccgtttgaaaattcctaggaactcgaaatgaatttccttcatcttgtattgtcttcaaaaacctttt 8621  T
Q  423 aag 425  Q
    |||    
T  8622 aag 8624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 204
Target Start/End: Original strand, 11237 - 11412
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatc--ctgcattgaaactctgatgcttgaacc 128  Q
    ||||| |||||||||| | ||||||||||| |||||||||| |||||||||||| | ||||||   | |||  || | ||| |||| |||||||||| ||    
T  11237 catggaaacatacatcgttacaaaacaatagaaaaacatacactagagagaacaagaggaggatggatatcctctaccttggaactttgatgcttgaccc 11336  T
Q  129 atgcctt-taactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttag 204  Q
     |||||| |||| || | |||||||||||||| | |||  ||||||||||||||  |||||||| || |||||||||    
T  11337 ttgccttgtaac-gttagctttctgaatgaataaaaatatgtgcaagggtctctatttatagcatattattacttag 11412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 426
Target Start/End: Original strand, 11619 - 11715
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||||| ||||||||||||||||||||||||| | |||||||||  ||||||| |||  |||| ||| |||| | |||||| |||| |||||    
T  11619 ttttcgtcccgatttcgatcgttcttccgtctggaaattcctaggaactcgaaatgaactttcgtcatcttgcattgacttcaaaaaccttctaaga 11715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 8207 - 8269
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||| |||||||||  | ||||||||||| |||||||||| |||||||||||| | ||||||    
T  8207 catggaaacatacattgttacaaaacaatagaaaaacatacactagagagaacaagaggagga 8269  T

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Target: scaffold0282 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 22094 - 22261
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttgaaccat 130  Q
    ||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||| | | | ||||| ||||||||| ||||| |  |||||||||| | ||    
T  22094 tcatggcaacataaatcataacaaaacaataaaaatatataccctggagagaataagagaaggaagaaatcctgccttgaagcgatgatgcttgacctat 22193  T
Q  131 gcctttaactgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgatt 198  Q
     |||| |||| |    ||||||||||||  |||||||| ||||||||||||  ||| | |||||||||    
T  22194 tccttgaactatagtgtttctgaatgaaaaataatgagagcaagggtctctagttaaatcaaatgatt 22261  T

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Target: scaffold0282; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 447
Target Start/End: Original strand, 22443 - 22551
Alignment:
Q  339 cgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttc 438  Q
    ||||||| ||||||||||| |||||||| | |||||||||| ||||||||||| ||||  |||||||||| | |||| |||| || || | || ||||||    
T  22443 cgttttcaatcgttcttccctctggaaaatcctaggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttctatgaaccattgacttc 22542  T
Q  439 aatcttcat 447  Q
    | |||||||    
T  22543 attcttcat 22551  T

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Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 426
Target Start/End: Original strand, 17860262 - 17860365
Alignment:
Q  323 tcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagcctttt 422  Q
    |||||| |||||| || |||||| ||||||||| || ||||||||| |||||||||| ||||||||||| |||| |||||||||||  ||||| |||| |    
T  17860262 tcttgcgttttcaccctgttttcaatcgttctttcgactggaaactcctaggaacttgaaatgaattttcttcactttgtattgtctacaaaaaccttct 17860361  T
Q  423 aaga 426  Q
    ||||    
T  17860362 aaga 17860365  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 30355591 - 30355493
Alignment:
Q  350 gttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgataga-cttcaatcttcat 447  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||| ||| ||||||| |||||| |||| ||||| |||| || |||||||||||||    
T  30355591 gttcttccgtctggaaactcctgtgaacttgaaatgaattttattcactttttattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcat 30355493  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 15575235 - 15575135
Alignment:
Q  313 aggtgcgaaatcttgcattttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctca 412  Q
    ||||||||  |||| ||||| ||||| |||||||||| |||||||||||  || || |||||||||| ||||||||||| |||| ||||||||||| |||    
T  15575235 aggtgcgatttcttacatttccatcctgttttcgatctttcttccgtctaaaatctcctaggaacttgaaatgaattttcttcactttgtattgtcttca 15575136  T
Q  413 a 413  Q
    |    
T  15575135 a 15575135  T

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Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 19670089 - 19670152
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    ||||| ||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  19670089 tcatgacaacaaaaatcataacaaaataatataaaaacataccctagagagaacagggggagga 19670152  T

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Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 16528278 - 16528117
Alignment:
Q  43 acatcataacaaaacaatataaaaacataccctagagagaacaggcggagga-aaaaatc--ctgcattgaaactctgatgcttgaaccatgcctttaac 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||  || |||  |||| ||| |||||  |||||||| || | |||| |||    
T  16528278 acatcataacaaaacaatacaaaaacataccctagagagaacaagaggaggatgaagatcctctgccttggaactccaatgcttgaccctttccttgaac 16528179  T
Q  140 tgtcaactttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattact 201  Q
        | |||||| ||||||| |||||| |||||| |||||||  |||||||| |||||||||    
T  16528178 aactagctttctaaatgaataataatgtgtgcaatggtctctatttatagcacatgattact 16528117  T

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Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 30235853 - 30235938
Alignment:
Q  37 caacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttga 125  Q
    |||||||||||||||   ||||||| ||||||||||||||||||||||| | ||||||| ||||||| | || ||||||||||| ||||    
T  30235853 caacatacatcataa---aacaatagaaaaacataccctagagagaacaagaggaggaagaaatcctaccttaaaactctgatgtttga 30235938  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 15575584 - 15575530
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||    
T  15575584 tcatggcaacaaacatcataagaaaacaatagaataacatacccaagagagaaca 15575530  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 9725660 - 9725712
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaa 83  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||| ||| ||||    
T  9725660 tcatgacaacagacatcataacaaaacaatagaaaaacatacccaagaaagaa 9725712  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 26499331 - 26499393
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||| ||||| |||| || ||||| ||||||||||||||||| ||||||||||| | ||||||    
T  26499331 catgacaacaaacataattacaaagcaatataaaaacataccttagagagaacaagaggagga 26499393  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16439985 - 16439932
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||| |||| || |||||| |||||||||||||| ||| |||||||||    
T  16439985 catggcaacaaacattattacaaaataatataaaaacatatcctggagagaaca 16439932  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 17859957 - 17860050
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggaggaaaaaatcctgcattgaaactctgatgcttga 125  Q
    |||||||||| | || || ||||||||||| ||||||||||| || |||||||  | | ||||| ||||| ||| ||||| |||||||| ||||    
T  17859957 catggcaacaaatatgattacaaaacaatagaaaaacataccatatagagaaccagagaaggaagaaatcatgccttgaagctctgatgtttga 17860050  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13723343 - 13723387
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacatacccta 76  Q
    |||| ||||| ||||||||||||||||||| ||||| ||||||||    
T  13723343 catgacaacaaacatcataacaaaacaatagaaaaatatacccta 13723387  T

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Target: scaffold0362 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 7913 - 7817
Alignment:
Q  330 ttttcatcccgttttcgatcgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaaga 426  Q
    ||||| ||| |||||||||| |||||||||||| ||||| |||||||||| ||||||||||| || | |||||| |||| |||| | |||| |||||    
T  7913 ttttcgtccagttttcgatcattcttccgtctgaaaactcctaggaacttgaaatgaattttcttgactttgtactgtcttcaacaaccttctaaga 7817  T

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Target: scaffold0362; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 8296 - 8242
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||| |||||| |||||||||  |||||||| ||||| |||||||||||||||||    
T  8296 tcatagcaacaaacatcataatgaaacaatagaaaaaaataccctagagagaaca 8242  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 33219 - 33274
Alignment:
Q  30 atcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||||  ||||||| ||||||||||| ||||| |||| ||||||||||||    
T  33219 atcatggcaaccgacatcattacaaaacaatagaaaaagatactctagagagaaca 33274  T

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Target: scaffold0855 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 2497 - 2551
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||| ||||||| |||| |||| |||| ||||||||||||| ||||    
T  2497 tcatggcaacatatatcataagaaaataatagaaaatcataccctagagataaca 2551  T

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Target: scaffold0847 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 2662 - 2716
Alignment:
Q  31 tcatggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    ||||||||||||| ||||||| |||| |||| |||| ||||||||||||| ||||    
T  2662 tcatggcaacatatatcataagaaaataatagaaaatcataccctagagataaca 2716  T

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Target: scaffold0190 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 11143 - 11205
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaacaggcggagga 94  Q
    |||||||||||| || || ||||||||||| ||||| ||||| ||||||||||| | ||||||    
T  11143 catggcaacataaattatcacaaaacaatagaaaaatataccttagagagaacatgaggagga 11205  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 21905 - 21847
Alignment:
Q  146 ctttctgaatgaatgataatgagtgcaagggtctctcattatagcaaatgattacttag 204  Q
    |||||||||||||| | |||| |||||| |||||||  |||||||| ||||||||||||    
T  21905 ctttctgaatgaataagaatgcgtgcaatggtctctatttatagcatatgattacttag 21847  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 228026 - 228124
Alignment:
Q  349 cgttcttccgtctggaaacttctaggaacttaaaatgaattttattcattttgtattgtcctcaaaagccttttaagagcgatagacttcaatcttcat 447  Q
    ||||||||||||| | ||  ||| ||||||| ||||||||||| |||| ||||||||||| |||||  |||| ||||| | || | ||||||| |||||    
T  228026 cgttcttccgtcttgcaatgtcttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaaccattgtcttcaatattcat 228124  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 37623 - 37570
Alignment:
Q  32 catggcaacatacatcataacaaaacaatataaaaacataccctagagagaaca 85  Q
    |||||||||  || |||| ||||||||||  |||||||||||||||||||||||    
T  37623 catggcaaccgacgtcattacaaaacaattgaaaaacataccctagagagaaca 37570  T

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