View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21197_low_53 (Length: 266)

Name: NF21197_low_53
Description: NF21197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21197_low_53
NF21197_low_53
[»] chr4 (40 HSPs)
chr4 (127-266)||(55737356-55737492)
chr4 (8-127)||(6034043-6034162)
chr4 (20-127)||(11511456-11511563)
chr4 (8-126)||(41236347-41236465)
chr4 (8-126)||(50052410-50052528)
chr4 (8-128)||(40574777-40574897)
chr4 (8-127)||(31910191-31910310)
chr4 (8-126)||(29239886-29240004)
chr4 (8-126)||(48183031-48183149)
chr4 (8-127)||(50526153-50526272)
chr4 (8-126)||(480429-480547)
chr4 (8-126)||(24995089-24995207)
chr4 (22-128)||(3481652-3481758)
chr4 (8-126)||(42044349-42044467)
chr4 (22-126)||(19670712-19670816)
chr4 (8-127)||(54473515-54473634)
chr4 (8-126)||(29234227-29234345)
chr4 (22-126)||(47986208-47986312)
chr4 (22-126)||(55475191-55475295)
chr4 (22-103)||(29977908-29977989)
chr4 (8-77)||(41823931-41824000)
chr4 (22-126)||(8343159-8343263)
chr4 (8-132)||(23608229-23608353)
chr4 (22-126)||(29547955-29548059)
chr4 (22-106)||(17983739-17983823)
chr4 (22-126)||(44536742-44536845)
chr4 (22-126)||(50813888-50813992)
chr4 (22-133)||(55079709-55079821)
chr4 (8-131)||(48647708-48647831)
chr4 (22-126)||(32766958-32767062)
chr4 (22-131)||(18924491-18924600)
chr4 (25-126)||(28480267-28480368)
chr4 (25-126)||(28481142-28481243)
chr4 (25-126)||(28482017-28482118)
chr4 (22-97)||(29589736-29589811)
chr4 (8-122)||(53352548-53352661)
chr4 (8-86)||(56300147-56300225)
chr4 (22-127)||(29535376-29535480)
chr4 (22-126)||(47104544-47104648)
chr4 (37-100)||(43735846-43735908)
[»] chr3 (38 HSPs)
chr3 (9-130)||(26141515-26141636)
chr3 (11-126)||(49607414-49607529)
chr3 (8-129)||(53982008-53982129)
chr3 (8-126)||(11347904-11348022)
chr3 (9-126)||(41189747-41189864)
chr3 (8-127)||(33644199-33644318)
chr3 (8-134)||(20764897-20765023)
chr3 (8-122)||(52629304-52629418)
chr3 (13-121)||(48587078-48587186)
chr3 (8-123)||(26754698-26754813)
chr3 (22-132)||(14623835-14623945)
chr3 (8-126)||(17470405-17470523)
chr3 (20-126)||(47531865-47531971)
chr3 (20-126)||(51419354-51419460)
chr3 (8-126)||(54868877-54868995)
chr3 (22-131)||(33118847-33118956)
chr3 (22-110)||(13898051-13898139)
chr3 (8-126)||(8076393-8076511)
chr3 (11-121)||(31456694-31456804)
chr3 (9-126)||(11907371-11907488)
chr3 (22-126)||(35536626-35536730)
chr3 (23-126)||(27714888-27714991)
chr3 (8-126)||(24699936-24700054)
chr3 (8-126)||(36707410-36707524)
chr3 (22-126)||(8956762-8956866)
chr3 (20-131)||(11095349-11095458)
chr3 (8-126)||(9562999-9563117)
chr3 (8-121)||(30801715-30801828)
chr3 (22-127)||(45058549-45058653)
chr3 (22-121)||(25407143-25407243)
chr3 (8-126)||(48375688-48375806)
chr3 (22-104)||(36331325-36331407)
chr3 (22-126)||(41080709-41080811)
chr3 (23-126)||(35093585-35093688)
chr3 (56-126)||(35965804-35965874)
chr3 (55-126)||(36331407-36331478)
chr3 (45-108)||(43745764-43745827)
chr3 (22-123)||(42823114-42823215)
[»] chr5 (31 HSPs)
chr5 (10-128)||(28177773-28177891)
chr5 (20-127)||(26720515-26720622)
chr5 (20-127)||(26990264-26990371)
chr5 (20-126)||(2740274-2740380)
chr5 (8-129)||(40145404-40145525)
chr5 (8-136)||(33149620-33149748)
chr5 (8-126)||(6679698-6679816)
chr5 (8-128)||(14831812-14831932)
chr5 (8-121)||(18520866-18520979)
chr5 (22-126)||(35943888-35943992)
chr5 (8-127)||(35785198-35785317)
chr5 (8-126)||(15409592-15409710)
chr5 (8-126)||(36732924-36733042)
chr5 (22-126)||(2252164-2252268)
chr5 (8-119)||(13811659-13811770)
chr5 (22-126)||(3921261-3921365)
chr5 (20-128)||(42414296-42414404)
chr5 (26-126)||(31008988-31009088)
chr5 (21-131)||(33825319-33825429)
chr5 (8-103)||(39557499-39557594)
chr5 (22-108)||(16327919-16328005)
chr5 (8-126)||(20073498-20073616)
chr5 (22-127)||(6259997-6260102)
chr5 (35-118)||(41470425-41470508)
chr5 (22-132)||(9603807-9603917)
chr5 (22-111)||(25831302-25831389)
chr5 (8-121)||(36875594-36875698)
chr5 (22-126)||(39688893-39688997)
chr5 (63-122)||(10356638-10356698)
chr5 (87-128)||(21370012-21370053)
chr5 (25-126)||(38296203-38296304)
[»] chr1 (35 HSPs)
chr1 (8-126)||(32813247-32813365)
chr1 (8-129)||(27564717-27564838)
chr1 (8-128)||(47452302-47452422)
chr1 (8-127)||(9474858-9474977)
chr1 (8-126)||(2581915-2582033)
chr1 (8-126)||(51898665-51898783)
chr1 (8-121)||(44548358-44548471)
chr1 (8-128)||(37649196-37649316)
chr1 (13-128)||(26440732-26440847)
chr1 (20-127)||(48716276-48716383)
chr1 (8-126)||(3000319-3000437)
chr1 (8-126)||(38632303-38632421)
chr1 (20-126)||(37926432-37926538)
chr1 (8-126)||(38595154-38595272)
chr1 (8-126)||(41758805-41758923)
chr1 (8-126)||(49811509-49811627)
chr1 (22-127)||(41608489-41608594)
chr1 (8-126)||(50630458-50630576)
chr1 (22-127)||(50590996-50591101)
chr1 (11-126)||(8346373-8346488)
chr1 (12-121)||(26274437-26274546)
chr1 (22-126)||(5958996-5959100)
chr1 (20-126)||(43132-43238)
chr1 (22-128)||(47748441-47748546)
chr1 (8-125)||(44453980-44454097)
chr1 (20-96)||(13414791-13414867)
chr1 (20-136)||(45044554-45044670)
chr1 (8-135)||(11152360-11152486)
chr1 (56-126)||(23597121-23597191)
chr1 (20-99)||(48489328-48489406)
chr1 (26-128)||(6260868-6260970)
chr1 (26-130)||(3302533-3302637)
chr1 (37-100)||(750239-750301)
chr1 (37-135)||(5489880-5489977)
chr1 (56-126)||(7740733-7740803)
[»] chr8 (35 HSPs)
chr8 (8-128)||(43414563-43414683)
chr8 (8-124)||(10621069-10621185)
chr8 (8-136)||(34012278-34012406)
chr8 (21-127)||(15048177-15048282)
chr8 (8-127)||(40423925-40424044)
chr8 (8-126)||(12831047-12831165)
chr8 (8-126)||(37038479-37038597)
chr8 (8-121)||(5957835-5957948)
chr8 (11-128)||(15197331-15197448)
chr8 (8-128)||(504103-504223)
chr8 (8-119)||(14547929-14548040)
chr8 (8-126)||(1179922-1180040)
chr8 (8-126)||(4854845-4854963)
chr8 (20-129)||(23122591-23122700)
chr8 (22-126)||(30479470-30479574)
chr8 (22-126)||(10284627-10284731)
chr8 (22-126)||(16383377-16383481)
chr8 (8-106)||(8841414-8841512)
chr8 (56-130)||(20074964-20075038)
chr8 (8-126)||(44507069-44507187)
chr8 (22-126)||(32032725-32032828)
chr8 (22-126)||(34307216-34307320)
chr8 (8-126)||(15258911-15259029)
chr8 (22-126)||(16056397-16056501)
chr8 (22-126)||(24307789-24307893)
chr8 (8-121)||(9122200-9122303)
chr8 (22-126)||(17443825-17443929)
chr8 (22-126)||(42221515-42221619)
chr8 (22-126)||(14055588-14055692)
chr8 (22-128)||(38229427-38229532)
chr8 (22-74)||(42354584-42354636)
chr8 (63-126)||(24307629-24307692)
chr8 (37-100)||(30660676-30660738)
chr8 (37-127)||(2547100-2547189)
chr8 (8-126)||(25838197-25838307)
[»] chr2 (34 HSPs)
chr2 (20-128)||(40613896-40614004)
chr2 (9-126)||(42257193-42257310)
chr2 (20-126)||(5574482-5574588)
chr2 (8-126)||(7465717-7465835)
chr2 (8-126)||(17473020-17473138)
chr2 (8-126)||(9058480-9058598)
chr2 (8-130)||(28381637-28381759)
chr2 (8-126)||(30915463-30915581)
chr2 (8-121)||(19930802-19930915)
chr2 (8-121)||(28863460-28863573)
chr2 (8-128)||(13438341-13438461)
chr2 (8-126)||(33436082-33436200)
chr2 (8-127)||(4060684-4060803)
chr2 (11-126)||(10249367-10249482)
chr2 (8-127)||(40701477-40701596)
chr2 (22-128)||(27864702-27864808)
chr2 (8-126)||(32505630-32505748)
chr2 (20-126)||(38273136-38273242)
chr2 (22-121)||(41575142-41575242)
chr2 (8-126)||(2533124-2533241)
chr2 (8-126)||(20700815-20700933)
chr2 (20-126)||(36168836-36168942)
chr2 (22-127)||(17820000-17820105)
chr2 (22-126)||(45097731-45097835)
chr2 (20-126)||(38882805-38882913)
chr2 (22-128)||(43490119-43490225)
chr2 (57-126)||(33436211-33436280)
chr2 (22-106)||(2997483-2997567)
chr2 (22-126)||(26891500-26891604)
chr2 (22-126)||(38732354-38732458)
chr2 (22-72)||(3154197-3154247)
chr2 (56-126)||(15428770-15428840)
chr2 (8-120)||(3439985-3440097)
chr2 (22-106)||(13365373-13365457)
[»] chr6 (20 HSPs)
chr6 (8-126)||(31976248-31976366)
chr6 (8-135)||(32869669-32869796)
chr6 (8-121)||(22880640-22880753)
chr6 (8-128)||(17598552-17598672)
chr6 (20-126)||(31110755-31110859)
chr6 (8-105)||(11427639-11427736)
chr6 (8-126)||(6209447-6209565)
chr6 (22-128)||(31953026-31953132)
chr6 (22-127)||(15508020-15508125)
chr6 (22-126)||(15990038-15990142)
chr6 (11-95)||(23128112-23128196)
chr6 (22-126)||(30341356-30341460)
chr6 (11-111)||(31109385-31109485)
chr6 (22-127)||(4231547-4231652)
chr6 (21-121)||(28536483-28536581)
chr6 (20-126)||(29857827-29857933)
chr6 (8-119)||(946383-946494)
chr6 (22-122)||(9379708-9379808)
chr6 (22-126)||(12732482-12732586)
chr6 (8-74)||(30870066-30870132)
[»] chr7 (37 HSPs)
chr7 (13-126)||(3434562-3434675)
chr7 (8-125)||(35522877-35522994)
chr7 (8-126)||(8080365-8080483)
chr7 (8-128)||(19329840-19329960)
chr7 (20-126)||(36361907-36362013)
chr7 (8-121)||(3784000-3784113)
chr7 (8-127)||(38267039-38267158)
chr7 (20-126)||(7389389-7389495)
chr7 (20-126)||(19436181-19436287)
chr7 (8-126)||(26296644-26296762)
chr7 (20-126)||(36362026-36362132)
chr7 (8-126)||(46033783-46033901)
chr7 (23-128)||(21234399-21234504)
chr7 (8-128)||(35137531-35137651)
chr7 (8-126)||(38837217-38837335)
chr7 (8-126)||(40957707-40957825)
chr7 (32-126)||(46374808-46374902)
chr7 (26-126)||(7727906-7728006)
chr7 (8-128)||(31735882-31735995)
chr7 (22-137)||(8238201-8238317)
chr7 (22-126)||(38044197-38044301)
chr7 (8-106)||(3694387-3694485)
chr7 (8-126)||(4999496-4999614)
chr7 (8-121)||(32951475-32951588)
chr7 (22-126)||(18207180-18207283)
chr7 (22-126)||(22343361-22343465)
chr7 (22-126)||(40846109-40846213)
chr7 (22-126)||(41915741-41915845)
chr7 (22-96)||(16374820-16374894)
chr7 (22-127)||(32564422-32564527)
chr7 (22-127)||(39255920-39256024)
chr7 (8-126)||(36208173-36208291)
chr7 (22-127)||(41423681-41423786)
chr7 (65-126)||(35468894-35468955)
chr7 (22-121)||(2318239-2318338)
chr7 (80-126)||(11044188-11044234)
chr7 (24-92)||(27744307-27744375)
[»] scaffold0321 (1 HSPs)
scaffold0321 (8-126)||(10091-10209)
[»] scaffold1268 (1 HSPs)
scaffold1268 (8-128)||(911-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (8-128)||(911-1031)
[»] scaffold0237 (1 HSPs)
scaffold0237 (20-126)||(4029-4135)
[»] scaffold0316 (1 HSPs)
scaffold0316 (22-135)||(17049-17158)
[»] scaffold0018 (1 HSPs)
scaffold0018 (22-106)||(152518-152602)
[»] scaffold0110 (1 HSPs)
scaffold0110 (22-127)||(8859-8964)


Alignment Details
Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 55737492 - 55737356
Alignment:
Q  127 ataataaaaatgcaaataaaagtgatatgatcatgaaaatttcttaactttataattataaccacatgtccacatcttcttctaccataaaagacagtga 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||    
T  55737492 ataataaaaatgcaaataaaagtgatatgatcatgaaaatttcttaactt-ataattataaccacatgtccacatg--catctaccataaaagacagtga 55737396  T
Q  227 aaaagaaggccacttacctagagcttccaattccctcttc 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55737395 aaaagaaggccacttacctagagcttccaattccctcttc 55737356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 6034162 - 6034043
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| || |||||||||||| ||||  |||||||||||||||||||||||||||     
T  6034162 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 6034063  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  6034062 tgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 11511456 - 11511563
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| |||| |||||||    
T  11511456 gaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 11511555  T
Q  120 ataactca 127  Q
    || |||||    
T  11511556 attactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 41236465 - 41236347
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||     
T  41236465 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaaggg 41236366  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  41236365 tgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 50052410 - 50052528
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  50052410 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagga 50052509  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  50052510 tgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 40574897 - 40574777
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  |||||||||||  |  |||||||||||||| ||||  |||||||||||||||| |||||||||||    
T  40574897 gagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagga 40574798  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||||||||||    
T  40574797 tgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 31910310 - 31910191
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||||||| | | ||||||||||||| ||||  |||||||| |||||||| ||||||||||    
T  31910310 gagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagga 31910211  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| |||||||||||||||    
T  31910210 tgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 29240004 - 29239886
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||||||| |||| ||||| |||||| |||||||| |||| |||||||| |||||||||||||||||||     
T  29240004 gagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaaggg 29239905  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  29239904 tgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 48183031 - 48183149
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||| |||||     
T  48183031 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaaggg 48183130  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  48183131 tgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 50526153 - 50526272
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||| |||||| ||||||||| || ||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||    
T  50526153 gagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 50526252  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  50526253 tgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 480429 - 480547
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||||     
T  480429 gagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaaggg 480528  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  480529 tgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 24995089 - 24995207
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||| |||||||||| ||| |||| ||||| |||||||| |||||||||||  |||||||||||||||||||| ||||||     
T  24995089 gagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaaggg 24995188  T
Q  108 tgtccatgtatcataactc 126  Q
    ||||||| |||||| ||||    
T  24995189 tgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 3481758 - 3481652
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||||||||||||| |||| ||||| | ||||||||||||| ||||  |||||||| |||||||||||||||| | |||| |||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcat 3481659  T
Q  122 aactcat 128  Q
     ||||||    
T  3481658 tactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 42044349 - 42044467
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||  |||| |||||||||||||||||     
T  42044349 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaaggg 42044448  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  42044449 tgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 19670712 - 19670816
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||| |||||| |||||||||||||||||||| |||  |||||||||    
T  19670712 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 19670811  T
Q  122 aactc 126  Q
    |||||    
T  19670812 aactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 54473515 - 54473634
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||| |||||||||||||| ||| |||| ||||| |||||| |||||||| ||||  ||||||| ||||||||| |||||||||     
T  54473515 gagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaaggg 54473614  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  54473615 tgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 29234227 - 29234345
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||    | |||||||||||||||||| ||||||     
T  29234227 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaaggg 29234326  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  29234327 tgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 47986312 - 47986208
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| |||| ||||||| || ||||||||||||||||| |||  |||||||||    
T  47986312 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T
Q  122 aactc 126  Q
    |||||    
T  47986212 aactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 55475295 - 55475191
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| ||| ||  || ||||| || |||| |||||||||||| ||||  |||||||||||||||||||||||||||||||  |||||||||    
T  55475295 aaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcat 55475196  T
Q  122 aactc 126  Q
    |||||    
T  55475195 aactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 29977989 - 29977908
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccaccta 103  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||  ||| || |||||||||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 29977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 41824000 - 41823931
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtg 77  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||    
T  41824000 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtg 41823931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 8343159 - 8343263
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||| | ||| || ||| ||||| || |||| ||||||||||||||||   ||||||||| |||||||||||||||||||||  |||||||||    
T  8343159 aaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcat 8343258  T
Q  122 aactc 126  Q
    |||||    
T  8343259 aactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 23608353 - 23608229
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  ||||||||||||||||||||||||  | || ||||| ||||||||||||||| ||||  ||||||| ||||||||| || ||||||     
T  23608353 gagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaaggg 23608254  T
Q  108 tgtccatgtatcataactcataata 132  Q
    |||| || |||||| |||| |||||    
T  23608253 tgtctatatatcattactcttaata 23608229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 29547955 - 29548059
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||| ||||||| ||| || ||||||||| || |||| |||||||||||| ||||  |||||| || |||||||||||||||||||||  |||||||||    
T  29547955 aaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 29548054  T
Q  122 aactc 126  Q
    |||||    
T  29548055 aactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 17983739 - 17983823
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| ||||||||||||||||||||    
T  17983739 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 44536742 - 44536845
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| ||| |||||| || || ||||||| |||||||||||| |||| ||||| ||||||||||||||||||||   |||  |||||||||    
T  44536742 aaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcat 44536840  T
Q  122 aactc 126  Q
    |||||    
T  44536841 aactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 50813888 - 50813992
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| | ||| ||||||| |||||||||||| ||||  |||||| ||||||||| |||||||||  |||  |||||||||    
T  50813888 aaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcat 50813987  T
Q  122 aactc 126  Q
    |||||    
T  50813988 aactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 55079709 - 55079821
Alignment:
Q  22 aaagagaaagtgtgcttgtgtggga-tccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||||||||||| ||||||||||  ||||| || |||| |||||||||||| | ||  ||||||  ||||||||||||||||||| |||  ||||||||    
T  55079709 aaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatca 55079808  T
Q  121 taactcataataa 133  Q
    |||||| ||||||    
T  55079809 taactcctaataa 55079821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 48647708 - 48647831
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| |||||||||| ||  |||| |||||||||||| |||||||||||||  ||| ||  |||||||||  |||||||||    
T  48647708 gagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagga 48647807  T
Q  108 tgtccatgtatcataactcataat 131  Q
    |||  |||| ||||||||| ||||    
T  48647808 tgtttatgtgtcataactcttaat 48647831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 32767062 - 32766958
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| ||||||  || ||||| || |||| |||||||||||| | ||  |||||| |||||||||||||||||||  |||  |||||||||    
T  32767062 aaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T
Q  122 aactc 126  Q
    |||||    
T  32766962 aactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 18924491 - 18924600
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||  | ||| |  |||| |||||||||||| |||| || |||| |||||||||||||||||||| | |  ||| |||||    
T  18924491 aaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcat 18924590  T
Q  122 aactcataat 131  Q
    ||||||||||    
T  18924591 aactcataat 18924600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 28480267 - 28480368
Alignment:
Q  25 gagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataac 124  Q
    ||||||||||| ||||||||| ||||  |||| || |||||||||||| ||||| ||| ||   |||||||| ||||||||| |||| |||||| |||||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28480366  T
Q  125 tc 126  Q
    ||    
T  28480367 tc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 28481142 - 28481243
Alignment:
Q  25 gagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataac 124  Q
    ||||||||||| ||||||||| ||||  |||| || |||||||||||| ||||| ||| ||   |||||||| ||||||||| |||| |||||| |||||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28481241  T
Q  125 tc 126  Q
    ||    
T  28481242 tc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 28482017 - 28482118
Alignment:
Q  25 gagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataac 124  Q
    ||||||||||| ||||||||| ||||  |||| || |||||||||||| ||||| ||| ||   |||||||| ||||||||| |||| |||||| |||||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataac 28482116  T
Q  125 tc 126  Q
    ||    
T  28482117 tc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 29589736 - 29589811
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgc 97  Q
    ||||||||||||| |||||||||| ||||| || |||| | |||||||||| ||||  |||||| |||||||||||    
T  29589736 aaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 53352548 - 53352661
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||||| |||||||| ||| ||||  | || ||||||||||||||| |||   ||| ||||  ||||||| |||||||||     
T  53352548 gagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaaggg 53352646  T
Q  108 tgtccatgtatcata 122  Q
    |||| ||||||||||    
T  53352647 tgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 56300147 - 56300225
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaa 86  Q
    ||||||| ||| | |||||||||||||| |||||  |||| ||| ||||||| |||||||||||| |||| ||||||||    
T  56300147 gagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 29535480 - 29535376
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||| |||||||||||||| ||| ||| ||| || |||||| |||| ||  |||  | ||||||| ||||||||  |||| |||||||||    
T  29535480 aaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacctaagattgtctatgtatcat 29535382  T
Q  122 aactca 127  Q
    ||||||    
T  29535381 aactca 29535376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 47104648 - 47104544
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||| ||||||||| || ||   ||||||||||| |||||| ||||  ||||| || |||||||| || ||||| ||||| || ||||||    
T  47104648 aaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcat 47104549  T
Q  122 aactc 126  Q
     ||||    
T  47104548 tactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 43735846 - 43735908
Alignment:
Q  37 ttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccac 100  Q
    |||||||||||||| ||   ||||||||||| ||||||||| |||| |||||||||||||||||    
T  43735846 ttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgt-aaagggtgtattgccac 43735908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 26141515 - 26141636
Alignment:
Q  9 agaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  109 gtccatgtatcataactcataa 130  Q
    ||| ||||||||||||||||||    
T  26141615 gtctatgtatcataactcataa 26141636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 49607529 - 49607414
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||| |||    
T  49607529 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 49607430  T
Q  111 ccatgtatcataactc 126  Q
    | ||||||||| ||||    
T  49607429 ctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 53982129 - 53982008
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  53982129 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 53982030  T
Q  108 tgtccatgtatcataactcata 129  Q
    |||| ||||||||| |||||||    
T  53982029 tgtctatgtatcattactcata 53982008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 11347904 - 11348022
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||||||||||| ||  || |||||||| ||||||||||||||||| |||| |||||||||| ||||||| ||||||||||    
T  11347904 gagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagga 11348003  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  11348004 tgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 41189747 - 41189864
Alignment:
Q  9 agaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    |||||| ||| |||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||  ||||||| | |||||||||||||||||||    
T  41189747 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggat 41189846  T
Q  109 gtccatgtatcataactc 126  Q
    ||  ||||||||||||||    
T  41189847 gtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 33644318 - 33644199
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||| ||||     
T  33644318 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaaggg 33644219  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  33644218 tgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 20764897 - 20765023
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||||||| ||||||||||||||||| ||||  ||| |||| ||||||| |||||||||||    
T  20764897 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagga 20764996  T
Q  108 tgtccatgtatcataactcataataaa 134  Q
    |||| |||| |||||||||| ||||||    
T  20764997 tgtctatgtctcataactcaaaataaa 20765023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 52629418 - 52629304
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  52629418 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 52629319  T
Q  108 tgtccatgtatcata 122  Q
    |||| ||||||||||    
T  52629318 tgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 48587078 - 48587186
Alignment:
Q  13 gaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtcc 112  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||||||| | ||     
T  48587078 gaagagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatct 48587177  T
Q  113 atgtatcat 121  Q
    |||||||||    
T  48587178 atgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 26754813 - 26754698
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| |||||||||| ||| ||||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||     
T  26754813 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaaggg 26754714  T
Q  108 tgtccatgtatcataa 123  Q
    |||| ||| |||||||    
T  26754713 tgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 14623835 - 14623945
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||||||||||| | ||||  ||| ||| |||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  14623835 aaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcat 14623934  T
Q  122 aactcataata 132  Q
     |||| |||||    
T  14623935 tactcctaata 14623945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 17470523 - 17470405
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||  ||| ||| ||||||||||||||||| |     
T  17470523 gagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaagg 17470424  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  17470423 tgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 47531971 - 47531865
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||| | ||| || |||||||||||||| || |||| |||| ||| |||||||||||| ||||||||||| |||||||    
T  47531971 gaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatc 47531872  T
Q  120 ataactc 126  Q
    |||||||    
T  47531871 ataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 51419354 - 51419460
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||| || ||||| ||||||||||||||||| ||||  ||| ||||| ||||||| || ||||||||||| |||||||    
T  51419354 gaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatc 51419453  T
Q  120 ataactc 126  Q
    |||||||    
T  51419454 ataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 54868877 - 54868995
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| || || ||||||||||||||| ||||  ||||||| |||||||||||||||||||     
T  54868877 gagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 54868976  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  54868977 tgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 33118847 - 33118956
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||| || || |||||||| ||||| |||||||| |||||| ||||  ||||||||||||||||| ||||||||| |||| |||||||||    
T  33118847 aaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 33118946  T
Q  122 aactcataat 131  Q
    ||||| ||||    
T  33118947 aactcttaat 33118956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 13898051 - 13898139
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||||||||||||||||||||| | ||||  ||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  13898051 aaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgt 13898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 8076511 - 8076393
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||| ||| |||| ||||| |||||| |||||||| ||||  |||||||||||||| ||||||||||||     
T  8076511 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8076412  T
Q  108 tgtccatgtatcataactc 126  Q
    |||  ||||||||| ||||    
T  8076411 tgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 31456804 - 31456694
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| |||||||||||||||||||||| ||| ||||  |||| ||||||||||||||| ||||  ||||||||||||||||||| |||| || |||    
T  31456804 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgt 31456705  T
Q  111 ccatgtatcat 121  Q
    | |||||||||    
T  31456704 ctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  9 agaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    |||||| ||| ||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| ||||| |||  | | |||||||| ||||||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  109 gtccatgtatcataactc 126  Q
    ||| ||||||||||||||    
T  11907388 gtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 35536730 - 35536626
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||| ||||||||||||||  | ||||  ||||||||||||| |||||||||||  ||||||| ||||||||||||| |||||||||| |||||||||    
T  35536730 aaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcat 35536631  T
Q  122 aactc 126  Q
     ||||    
T  35536630 tactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  23 aagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcata 122  Q
    ||||||||||||||||||| ||| ||||  |||| ||||||||||||||| ||||  |||||||||||||||| |||||||| | |||| |||||||||     
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  123 actc 126  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 24699936 - 24700054
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||| ||||   || |||| ||| ||||||| ||||||||||||||  ||||||| |||||||||||| |||||||    
T  24699936 gagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagga 24700035  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  24700036 tgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36707410 - 36707524
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||    | |||||||| || || ||||||||||||||| |||| |||||||||||||||||| |||||||||     
T  36707410 gagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaaggg 36707505  T
Q  108 tgtccatgtatcataactc 126  Q
    | || ||||||||| ||||    
T  36707506 tatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 8956866 - 8956762
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||| ||||||||||||||  | ||||  ||| ||||||||| |||||||||||  ||||||||| ||||||||||| |||||||||| |||||||||    
T  8956866 aaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcat 8956767  T
Q  122 aactc 126  Q
     ||||    
T  8956766 tactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 11095349 - 11095458
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||| || || ||| | |  ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||| |||| |||||||    
T  11095349 gaaaagagaaagtgtgtttatgcggggtac--gtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 11095446  T
Q  120 ataactcataat 131  Q
    || |||| ||||    
T  11095447 attactcttaat 11095458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 9563117 - 9562999
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||| |||||||||||| |||||  ||||||| ||||| ||||||||||||||||| || |||||||||| ||||||| || |||| |     
T  9563117 gagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatgg 9563018  T
Q  108 tgtccatgtatcataactc 126  Q
    |||  ||||||||| ||||    
T  9563017 tgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 30801715 - 30801828
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| |||||||||||||| ||||| |||| || ||||| |||||| ||||  | ||||||||||||||  |||||||||     
T  30801715 gagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaaggg 30801814  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  30801815 tgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 45058549 - 45058653
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||| | |||||| ||| ||||| ||  ||| |||||||||||||||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  45058549 aaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcat 45058647  T
Q  122 aactca 127  Q
    ||||||    
T  45058648 aactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 25407143 - 25407243
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcaga-tttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||  |||||| |||| |||||||||||| || |||  ||||||||    
T  25407143 aaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatca 25407242  T
Q  121 t 121  Q
    |    
T  25407243 t 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 48375688 - 48375806
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| |||||||||| ||| |||||||||||||  ||||||||||| | || || |  | |||||||||| |||||||||     
T  48375688 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaaggg 48375787  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||| ||||||||||    
T  48375788 tgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 36331325 - 36331407
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaa 104  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| ||||| ||||||||||||    
T  36331325 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 41080811 - 41080709
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||||||||||||| ||||  ||||||| | ||||||||||  |||  ||||||||||||| |||| | ||||||||||| |||||||||    
T  41080811 aaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcat 41080714  T
Q  122 aactc 126  Q
     ||||    
T  41080713 tactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 35093688 - 35093585
Alignment:
Q  23 aagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcata 122  Q
    |||||||||||||||||| |||  | ||  ||||||| ||||||||||||  ||| |||||||| | ||||||| ||||||| | |||| ||||||| ||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgta 35093589  T
Q  123 actc 126  Q
    ||||    
T  35093588 actc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 35965804 - 35965874
Alignment:
Q  56 ccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    ||||||||||||||||||||||  ||||||||| ||||||  ||| |||||||||  ||||||||| ||||    
T  35965804 ccacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 36331407 - 36331478
Alignment:
Q  55 accacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    ||||| || ||||||||| |||| ||||||| ||||| ||||||| |||||| |||  ||||||||||||||    
T  36331407 accacatgccagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 43745827 - 43745764
Alignment:
Q  45 gatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    |||||| ||||  |||||||| ||||||| ||| ||||||||| |||||||||||| |||||||    
T  43745827 gatccacgtgatgacgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaaggat 43745764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 42823215 - 42823114
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||| | ||| || ||| ||||| ||||||| ||||| |||||| ||||  |||||| ||||||||| |||| ||| | |||  |||||||||    
T  42823215 aaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T
Q  122 aa 123  Q
    ||    
T  42823115 aa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 28177891 - 28177773
Alignment:
Q  10 gaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatg 109  Q
    ||||| ||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  28177891 gaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatg 28177792  T
Q  110 tccatgtatcataactcat 128  Q
    || ||||||||||||||||    
T  28177791 tctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 26720622 - 26720515
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||   ||| |||||||||||||||||||||||||||| |||||||    
T  26720622 gaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatc 26720523  T
Q  120 ataactca 127  Q
    ||||||||    
T  26720522 ataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 26990371 - 26990264
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||   ||| |||||||||||||||||||||||||||| |||||||    
T  26990371 gaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatc 26990272  T
Q  120 ataactca 127  Q
    ||||||||    
T  26990271 ataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 2740380 - 2740274
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||||    
T  2740380 gaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 2740281  T
Q  120 ataactc 126  Q
    || ||||    
T  2740280 attactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 40145525 - 40145404
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||     
T  40145525 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaaggg 40145426  T
Q  108 tgtccatgtatcataactcata 129  Q
    |||| ||||||||| |||||||    
T  40145425 tgtctatgtatcattactcata 40145404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 33149620 - 33149748
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| |||||||| |||||| ||||  |||||||||||||||| ||||||||||     
T  33149620 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 33149719  T
Q  108 tgtccatgtatcataactcataataaaaa 136  Q
    |||| ||||||||| |||||||| |||||    
T  33149720 tgtctatgtatcattactcataaaaaaaa 33149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 6679816 - 6679698
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||| ||    
T  6679816 gagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaaga 6679717  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  6679716 tgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 14831932 - 14831812
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  |||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||      
T  14831932 gagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagag 14831833  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  14831832 tgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18520866 - 18520979
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  ||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  18520866 gagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 18520965  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  18520966 tgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 35943888 - 35943992
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||| ||||  ||||||| | ||||||||||||||||| |||| |||||||||    
T  35943888 aaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcat 35943987  T
Q  122 aactc 126  Q
    |||||    
T  35943988 aactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 35785317 - 35785198
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| |||||||| || || ||||||||||||||| ||||  ||||||| |||||||||||||||||||     
T  35785317 gagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 35785218  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  35785217 tgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 15409592 - 15409710
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| ||||  ||||||||  ||||||| ||||||||||    
T  15409592 gagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagga 15409691  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  15409692 tgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36732924 - 36733042
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| | ||||||||||||| ||||  |||||||||||||||||| ||||||||     
T  36732924 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaaggg 36733023  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  36733024 tgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 2252164 - 2252268
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| ||||||||||||||||||||||||  |||||||||    
T  2252164 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 2252263  T
Q  122 aactc 126  Q
    |||||    
T  2252264 aactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 13811770 - 13811659
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| || ||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| | |||||||||||||||||     
T  13811770 gagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaaggg 13811671  T
Q  108 tgtccatgtatc 119  Q
    |||| |||||||    
T  13811670 tgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 3921261 - 3921365
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  3921261 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 3921360  T
Q  122 aactc 126  Q
    |||||    
T  3921361 aactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 42414296 - 42414404
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||| |||||||||||||| ||| ||||  |||| ||||||||||||||| ||||  ||||||||||||||||||||||||  | |||| |||||||    
T  42414296 gaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatc 42414395  T
Q  120 ataactcat 128  Q
    || ||||||    
T  42414396 attactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 31009088 - 31008988
Alignment:
Q  26 agaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataact 125  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  |||  |||  ||||||| |||||||||||||  |||||||||||||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataact 31008989  T
Q  126 c 126  Q
    |    
T  31008988 c 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 33825319 - 33825429
Alignment:
Q  21 aaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||||||||||||||||||||  | | ||  ||| |||||||||||||||||||||  |||||| | ||||||||||||||||| ||||| ||| ||||    
T  33825319 aaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatca 33825418  T
Q  121 taactcataat 131  Q
    | |||| ||||    
T  33825419 ttactcctaat 33825429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 39557499 - 39557594
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccaccta 103  Q
    ||||||| |||  ||||||||||||||| |||| |||| ||||||||| |||||||||||||||| |||| |||| ||  |||||||| |||||||    
T  39557499 gagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 16328005 - 16327919
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    ||||| |||||||||||||||| | | ||  ||| |||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  16328005 aaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggat 16327919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 20073498 - 20073616
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||| ||||||||||||||||  || |||| |||  ||||||  |||||||||||||| ||||||||||||||||| || |||| ||    
T  20073498 gagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatga 20073597  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| || |||||| ||||    
T  20073598 tgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 6259997 - 6260102
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||||||| |||| | |||||||||||| |||| ||||||||  |||  ||| ||||||||||||| |||||| || |||  |||||||||    
T  6259997 aaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcat 6260096  T
Q  122 aactca 127  Q
     |||||    
T  6260097 tactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  35 gcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtat 118  Q
    ||||||| ||| |||| ||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||| | |||| ||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 9603917 - 9603807
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||| |||| |||| ||||| |||||| ||||||||||||| |||   ||| || | |||||||  |||||||||||||  |||||||||    
T  9603917 aaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcat 9603818  T
Q  122 aactcataata 132  Q
     |||| |||||    
T  9603817 tactcttaata 9603807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 25831389 - 25831302
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtc 111  Q
    ||||||||| |||| ||||||||| ||||  ||||||||||| |||||||| ||||||| || |  ||||||||||||| ||||||||||    
T  25831389 aaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagatttttttgtgaatctcga--ggtgtattgccacttaaggatgtc 25831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 36875594 - 36875698
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  ||||||||||||||||||||| |||||||| ||||| |         ||||| ||||  |||||||||||||||||||||||||||     
T  36875594 gagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgccacctaaggg 36875684  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  36875685 tgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 39688893 - 39688997
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| ||| || ||| | ||| ||||||| | |||||||||| ||||  |||||| || ||||||||||| ||||| |||  |||||||||    
T  39688893 aaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcat 39688992  T
Q  122 aactc 126  Q
    |||||    
T  39688993 aactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 10356698 - 10356638
Alignment:
Q  63 tcagatttttatgtgaatgtcaaaggg-tgtattgccacctaaggatgtccatgtatcata 122  Q
    |||||||||| ||||  |||||| ||| |||||||||||||||||||||| ||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 21370053 - 21370012
Alignment:
Q  87 gggtgtattgccacctaaggatgtccatgtatcataactcat 128  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||    
T  21370053 gggtgtattaccacctaaggatgtctatgtatcataattcat 21370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 38296304 - 38296203
Alignment:
Q  25 gagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataac 124  Q
    |||||||||||||||||| ||||||| ||  | ||||||| ||||||| ||||  | | ||  ||||||||| ||||||||   ||| ||||||||||||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataac 38296205  T
Q  125 tc 126  Q
    ||    
T  38296204 tc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 32813365 - 32813247
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  32813365 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagga 32813266  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  32813265 tgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 27564717 - 27564838
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||  ||||||||||||||| ||||  ||||||| ||||||||||||||||||||    
T  27564717 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagga 27564816  T
Q  108 tgtccatgtatcataactcata 129  Q
    |||| ||||||||| |||||||    
T  27564817 tgtctatgtatcattactcata 27564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 47452302 - 47452422
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| |||||| |||||||| ||||  |||||||||||||||| ||||||||||     
T  47452302 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 47452401  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  47452402 tgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 9474858 - 9474977
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  9474858 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 9474957  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  9474958 tgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 2582033 - 2581915
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||| |||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  2582033 gagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 2581934  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  2581933 tgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 51898665 - 51898783
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||| |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||| ||    
T  51898665 gagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 51898764  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  51898765 tgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 44548358 - 44548471
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  | ||||| ||||||||||||||||| ||    
T  44548358 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaaga 44548457  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  44548458 tgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 37649316 - 37649196
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||| ||||||||||||||| || || || ||||||||||||||||||||| ||||  |||||||| |||||||||||||||| ||    
T  37649316 gagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaga 37649217  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  37649216 tgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 26440847 - 26440732
Alignment:
Q  13 gaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtcc 112  Q
    |||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||| ||||  ||| ||||||||||||| || |||||||||||     
T  26440847 gaagagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtct 26440748  T
Q  113 atgtatcataactcat 128  Q
    || |||| ||||||||    
T  26440747 atctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 48716276 - 48716383
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||| |||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||| |||| |||||||    
T  48716276 gaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatc 48716375  T
Q  120 ataactca 127  Q
    || |||||    
T  48716376 attactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 3000437 - 3000319
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  3000437 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 3000338  T
Q  108 tgtccatgtatcataactc 126  Q
    |||  ||||||||| ||||    
T  3000337 tgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 38632303 - 38632421
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||| |||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |||| ||| |||||||||||||||||||     
T  38632303 gagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaaggg 38632402  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  38632403 tgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 37926432 - 37926538
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||  ||| ||| | ||||||||||||||| ||| || |||||||    
T  37926432 gaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatc 37926531  T
Q  120 ataactc 126  Q
    |||||||    
T  37926532 ataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 38595272 - 38595154
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||| |     
T  38595272 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagg 38595173  T
Q  108 tgtccatgtatcataactc 126  Q
    |||  ||||||||| ||||    
T  38595172 tgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 41758923 - 41758805
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||  ||||||||||||||||||||  ||| |     
T  41758923 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatgg 41758824  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  41758823 tgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 49811509 - 49811627
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||  || || || | ||||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  49811509 gagaagaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaagga 49811608  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| || |||||||||||    
T  49811609 tgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 41608489 - 41608594
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||  ||| ||||| || |||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||  |||||||||    
T  41608489 aaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 41608588  T
Q  122 aactca 127  Q
    ||||||    
T  41608589 aactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 50630576 - 50630458
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |  |||||| |||||||||||||||||     
T  50630576 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaaggg 50630477  T
Q  108 tgtccatgtatcataactc 126  Q
    | || ||||||||| ||||    
T  50630476 tatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 50590996 - 50591101
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  50590996 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 50591095  T
Q  122 aactca 127  Q
    ||||||    
T  50591096 aactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 8346373 - 8346488
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| ||||||||||||||||||||||  || |||| ||||| ||||||||||||||| ||||  ||||||| ||||||||||||||||| | ||     
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  111 ccatgtatcataactc 126  Q
    | ||||||||| ||||    
T  8346473 ctatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 26274546 - 26274437
Alignment:
Q  12 agaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtc 111  Q
    ||||||| ||||||| ||||||| ||||||  ||||||| ||||| | ||||||||||||| |||| |||||||| | ||||||||||| ||||| ||||    
T  26274546 agaagagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtc 26274447  T
Q  112 catgtatcat 121  Q
     |||||||||    
T  26274446 tatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 5958996 - 5959100
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| ||||||| |||||||||||| ||||  ||||||  ||||||||||||| ||||| |||  |||||||||    
T  5958996 aaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcat 5959095  T
Q  122 aactc 126  Q
    |||||    
T  5959096 aactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 43238 - 43132
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||  |||| ||||| ||||||||||||||| ||||  ||||||||| ||||||| | ||||||  |||| |||||||    
T  43238 gaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatc 43139  T
Q  120 ataactc 126  Q
    || ||||    
T  43138 attactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 47748546 - 47748441
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||| | |||||| ||||||||| || |||| |||||||||||||| ||  |||| |||||||||||||||||||||| | |  |||||||||    
T  47748546 aaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagggtatttatgtatcat 47748448  T
Q  122 aactcat 128  Q
    |||||||    
T  47748447 aactcat 47748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 44454097 - 44453980
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||| ||||||||||||||||||||||| || ||||| |||||||||||| ||||  | ||||  | ||||||||||| ||| |     
T  44454097 gagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaagg 44453998  T
Q  108 tgtccatgtatcataact 125  Q
    |||| |||||||||||||    
T  44453997 tgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 13414867 - 13414791
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattg 96  Q
    ||||||||||| |||||||||||||| |||| ||||| |||||| |||||||| ||||  |||||||||||||||||    
T  13414867 gaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 45044554 - 45044670
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||| |||| ||||| ||| |||||||| | || |||||||||||| | ||  ||||||| ||||||||||||||||||||  |  |||||||    
T  45044554 gaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatc 45044653  T
Q  120 ataactcataataaaaa 136  Q
    ||||||| ||| |||||    
T  45044654 ataactcttaaaaaaaa 45044670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 11152360 - 11152486
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||| |||||| ||||||||| ||| || |  |||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||     
T  11152360 gagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg- 11152458  T
Q  108 tgtccatgtatcataactcataataaaa 135  Q
    |||| |||| |||| ||| || ||||||    
T  11152459 tgtctatgtttcattactgatcataaaa 11152486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 23597121 - 23597191
Alignment:
Q  56 ccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    ||||||||||||||||||||||  | |||||| |||||||||||||||| |||||| ||||||||| ||||    
T  23597121 ccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 48489406 - 48489328
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgcca 99  Q
    ||||| ||||| |||||||||| |||||||| |||||||| |||||||||||| |||| |||||  ||||||||||||||    
T  48489406 gaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 6260970 - 6260868
Alignment:
Q  26 agaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataact 125  Q
    ||||| ||||||| || ||| |||| |||||||| ||| |||||||||||||  |||  | ||||||||| |||||||||||| || || ||||||||||    
T  6260970 agaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataact 6260871  T
Q  126 cat 128  Q
    |||    
T  6260870 cat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 3302533 - 3302637
Alignment:
Q  26 agaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataact 125  Q
    ||||||||||||||| |||| ||||| |||  ||||||||||||||| ||||  |||| | |  | ||||| |||||||||||||  ||||||||| |||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattact 3302632  T
Q  126 cataa 130  Q
    |||||    
T  3302633 cataa 3302637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 750301 - 750239
Alignment:
Q  37 ttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccac 100  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||  ||| |||||||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 5489880 - 5489977
Alignment:
Q  37 ttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactcataataaaa 135  Q
    ||||||||| |||| ||  |||||||||||| |||||||||  ||| ||||||||||||||||| |  ||  || |||||||||| ||||| |||||||    
T  5489880 ttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccacatggggtggtacatgtatcatcactcaaaataaaa 5489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 7740803 - 7740733
Alignment:
Q  56 ccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||||||||| ||||||||||   |||||| || ||||||| ||| ||||| |||| ||||||||||||||    
T  7740803 ccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 43414563 - 43414683
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||  ||||||||||||| |||||| |||||||    
T  43414563 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagga 43414662  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||||||||||    
T  43414663 tgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 10621069 - 10621185
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||| ||||| | ||||||||||||||| ||||  |||||||||||||||| |||||||||||    
T  10621069 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagga 10621168  T
Q  108 tgtccatgtatcataac 124  Q
    |||| ||||||||||||    
T  10621169 tgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 34012278 - 34012406
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| |||||||| |||||| ||||  |||||||||||||||| ||||||||||     
T  34012278 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 34012377  T
Q  108 tgtccatgtatcataactcataataaaaa 136  Q
    |||| ||||||||| |||||||| |||||    
T  34012378 tgtctatgtatcattactcataaaaaaaa 34012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 15048177 - 15048282
Alignment:
Q  21 aaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||||||||||||||||||| ||| |||||||| | ||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||    
T  15048177 aaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatca 15048275  T
Q  121 taactca 127  Q
    |||||||    
T  15048276 taactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 40423925 - 40424044
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||     
T  40423925 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaaggg 40424024  T
Q  108 tgtccatgtatcataactca 127  Q
    | || ||||||||| |||||    
T  40424025 tatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 12831165 - 12831047
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||||     
T  12831165 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaaggg 12831066  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  12831065 tgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 37038597 - 37038479
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||| |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||| ||    
T  37038597 gagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 37038498  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  37038497 tgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 5957948 - 5957835
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||| ||||| |||||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||| |    
T  5957948 gagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaa 5957849  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  5957848 tgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 15197448 - 15197331
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||  |||    
T  15197448 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgt 15197349  T
Q  111 ccatgtatcataactcat 128  Q
    | ||||||||| ||||||    
T  15197348 ctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 504103 - 504223
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||| ||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| |||||||||||||||||||     
T  504103 gagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 504202  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  504203 tgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 14548040 - 14547929
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| |||||||||||||||||||     
T  14548040 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggg 14547941  T
Q  108 tgtccatgtatc 119  Q
    |||| |||||||    
T  14547940 tgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 1179922 - 1180040
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| || |||||  |||| ||||||||||||||| ||||  |||||||||||||||| ||||||||||     
T  1179922 gagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 1180021  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  1180022 tgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 4854845 - 4854963
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||||||||||||||  || |||||||| |||| | ||||||||||||||   ||| ||||||||||||||||||||||||    
T  4854845 gagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagga 4854944  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  4854945 tgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 23122591 - 23122700
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||||||| || ||| |||| ||||| ||||||||||||||| ||||  ||||||| ||||||||||||| ||||| |||| |||||||    
T  23122591 gaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatc 23122690  T
Q  120 ataactcata 129  Q
    || |||||||    
T  23122691 attactcata 23122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 30479470 - 30479574
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| | | ||||| |  |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||    
T  30479470 aaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcat 30479569  T
Q  122 aactc 126  Q
    |||||    
T  30479570 aactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 10284627 - 10284731
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||||||||| ||| |||| ||||| |||||||| |||||| ||||  |||||||| |||||||| ||| ||||| |||| |||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcat 10284726  T
Q  122 aactc 126  Q
    |||||    
T  10284727 aactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 16383481 - 16383377
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  16383481 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 16383382  T
Q  122 aactc 126  Q
    |||||    
T  16383381 aactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 8841414 - 8841512
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    ||||||| ||| | |||||||||||||||||||| ||| |||| ||||| |||||| |||||||| ||||  |||||||||||||| ||||||||||||    
T  8841414 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 20074964 - 20075038
Alignment:
Q  56 ccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactcataa 130  Q
    |||||||||| |||||||||||  |||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  20074964 ccacgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcataa 20075038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 44507069 - 44507187
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||||| |||||||  ||| |||| ||||| ||||||||||||||| ||||  ||| |||| ||||||| ||||||||||     
T  44507069 gagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggg 44507168  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  44507169 tgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 32032828 - 32032725
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| ||||||  |||||||| || |||| |||||||||||| |||| ||||| |||| ||||||||||||||||| |||  |||||||||    
T  32032828 aaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcat 32032730  T
Q  122 aactc 126  Q
    |||||    
T  32032729 aactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 34307320 - 34307216
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| | ||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  34307320 aaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 34307221  T
Q  122 aactc 126  Q
    |||||    
T  34307220 aactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 15258911 - 15259029
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| ||||||||||  || |||| |||||||| ||||||||||||||||| ||||| | || |||||||||| |||||      
T  15258911 gagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagag 15259010  T
Q  108 tgtccatgtatcataactc 126  Q
    | || ||||||||||||||    
T  15259011 tatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 16056397 - 16056501
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| || ||||||| ||| |||||||||  |||||||||    
T  16056397 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcat 16056496  T
Q  122 aactc 126  Q
    |||||    
T  16056497 aactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 24307789 - 24307893
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| | |||||||||| ||||  |||||| || ||||||||||||||||| |||  |||||||||    
T  24307789 aaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcat 24307888  T
Q  122 aactc 126  Q
    |||||    
T  24307889 aactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 9122303 - 9122200
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| || |||||||||||| |||          ||||||||||||||||||||     
T  9122303 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgt----------gggtgtattgccacctaaggg 9122214  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  9122213 tgtctatgtatcat 9122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 17443929 - 17443825
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||  ||||||||| ||||  |||| || |||||||||||| ||||| ||| ||   |||||||| ||||||||| |||| |||||||||    
T  17443929 aaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcat 17443830  T
Q  122 aactc 126  Q
    |||||    
T  17443829 aactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 42221619 - 42221515
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||||||||| |||| ||||| |||  ||||||||||||||| ||||  |||| | |  ||||||| |||||||||||||  |||||||||    
T  42221619 aaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcat 42221520  T
Q  122 aactc 126  Q
     ||||    
T  42221519 tactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 14055588 - 14055692
Alignment:
Q  22 aaagagaaagtgtgcttgtgt-gggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||| |||||| |||||||| ||| |||| ||||| || ||| |||||||| |||| ||||||| | |||||||| ||||||||| |||| ||||||||    
T  14055588 aaagaaaaagtg-gcttgtgtaggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatca 14055686  T
Q  121 taactc 126  Q
    ||||||    
T  14055687 taactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 38229532 - 38229427
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||||||||   | ||||| |||||||| |||||||||||| ||||  |||||  | | |||||||||||||||  ||| ||||||||||    
T  38229532 aaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtcag-gagcgtattgccacctaagagtgttcatgtatcat 38229434  T
Q  122 aactcat 128  Q
    |||||||    
T  38229433 aactcat 38229427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 42354584 - 42354636
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttat 74  Q
    ||||||||||||||||| |||| ||||||  ||| ||||||||||||||||||    
T  42354584 aaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagatttttat 42354636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24307692 - 24307629
Alignment:
Q  63 tcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||||||||| ||||  |||||| || ||||||||||||||||| |||  ||||||||||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 30660738 - 30660676
Alignment:
Q  37 ttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccac 100  Q
    ||||||||| |||| ||  |||||||||||| ||||||||| |||| |||||||||||||||||    
T  30660738 ttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgt-aaagggtgtattgccac 30660676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 2547100 - 2547189
Alignment:
Q  37 ttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactca 127  Q
    |||||||||||||| ||  |||||||||||| |||| ||||  ||| ||||||||||||||||| || ||  || |||||||||| |||||    
T  2547100 ttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccacatagggtggtacatgtatcatcactca 2547189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 25838307 - 25838197
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||| |||||||||||||  ||  |||||||||| ||||||        | |||| ||||||||  |||||||||||||||||||    
T  25838307 gagaagaggagagaaaagaaaaagtgtgcttgtacggagtccatgtgacaacgtgt--------tgtgtggatgtcaaaaagtgtattgccacctaagga 25838216  T
Q  108 tgtccatgtatcataactc 126  Q
    | || || |||||||||||    
T  25838215 tatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 40613896 - 40614004
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||||    
T  40613896 gaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 40613995  T
Q  120 ataactcat 128  Q
    |||||||||    
T  40613996 ataactcat 40614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 42257310 - 42257193
Alignment:
Q  9 agaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggat 108  Q
    |||||| ||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||  ||||||| | ||||||||||||||| |||    
T  42257310 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagat 42257211  T
Q  109 gtccatgtatcataactc 126  Q
    ||| ||||||||||||||    
T  42257210 gtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5574482 - 5574588
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||  |||| |||||||    
T  5574482 gaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatc 5574581  T
Q  120 ataactc 126  Q
    || ||||    
T  5574582 attactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 7465717 - 7465835
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    |||||||||||  ||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||| ||||||     
T  7465717 gagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 7465816  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  7465817 tgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 17473138 - 17473020
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||| ||||||     
T  17473138 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 17473039  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  17473038 tgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 9058598 - 9058480
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| ||||  |||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  9058598 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 9058499  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  9058498 tgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 28381637 - 28381759
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||  |||||||||| ||||||||||||||| ||||  |||| || |||||||||||||||||||     
T  28381637 gagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaaggg 28381736  T
Q  108 tgtccatgtatcataactcataa 130  Q
    |||| ||||||||| ||||||||    
T  28381737 tgtctatgtatcattactcataa 28381759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 30915581 - 30915463
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||||||   ||||||||||||||||||||||||||     
T  30915581 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaaggg 30915482  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  30915481 tgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 19930802 - 19930915
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| ||||  |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||     
T  19930802 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaaggg 19930901  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  19930902 tgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 28863573 - 28863460
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  ||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  28863573 gagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 28863474  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  28863473 tgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 13438461 - 13438341
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||| ||||||| |||||||||     
T  13438461 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaaggg 13438362  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  13438361 tgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 33436082 - 33436200
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||| ||| |||| ||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||     
T  33436082 gagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 33436181  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  33436182 tgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 4060803 - 4060684
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||| ||||||||||||| || |||||||| || || ||||||||||||||| |||| |||||||| ||||||||| |||||||||     
T  4060803 gagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaaggg 4060704  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  4060703 tgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 10249367 - 10249482
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| ||||||||| ||||||||| |||    
T  10249367 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgt 10249466  T
Q  111 ccatgtatcataactc 126  Q
    | ||||||||| ||||    
T  10249467 ctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 40701596 - 40701477
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| || || ||||||||||||||| ||||  ||||||| |||||||||||||||||||     
T  40701596 gagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 40701497  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  40701496 tgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 27864808 - 27864702
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||||||| || ||| |||| ||||  ||||||||||||||| |||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcat 27864709  T
Q  122 aactcat 128  Q
     ||||||    
T  27864708 tactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 32505630 - 32505748
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||| |||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| ||||||||| |||||||||     
T  32505630 gagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggg 32505729  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  32505730 tgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 38273136 - 38273242
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||| ||| ||| |||||||| | ||||||||||||||| ||||  ||| |||||||||||||||| ||||| ||||| |||||||    
T  38273136 gaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatc 38273235  T
Q  120 ataactc 126  Q
    |||||||    
T  38273236 ataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 41575242 - 41575142
Alignment:
Q  22 aaagagaaagtgtgcttgtgt-gggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||||||||||||||||||| ||| ||||  ||||||| ||||| |||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  41575242 aaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatca 41575143  T
Q  121 t 121  Q
    |    
T  41575142 t 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 2533241 - 2533124
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  |||||| |||||||||||||| ||| || ||||| | ||||||||||||||| ||||  ||||||||| ||||||||||| ||||||    
T  2533241 gagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaagga 2533143  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  2533142 tgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 20700933 - 20700815
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||||||||||| || ||| |||| ||||| ||||||||||||||| |||    |||||||||||||||||||| ||||||    
T  20700933 gagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagga 20700834  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  20700833 tgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 36168942 - 36168836
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||| |||||||| ||| |||||||| |||||||||| |||||| ||||   || ||||| ||||||| || ||||||||||| |||||||    
T  36168942 gaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatc 36168843  T
Q  120 ataactc 126  Q
    |||||||    
T  36168842 ataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 17820000 - 17820105
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||| ||||||||| |||| || ||||| |||||||||||| ||||  |||||| |||||||||||||||||  | |||| |||||||||    
T  17820000 aaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcat 17820099  T
Q  122 aactca 127  Q
    ||||||    
T  17820100 aactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 45097731 - 45097835
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| | ||  |||||| || |||||||||||||||||||||  |||||||||    
T  45097731 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 45097830  T
Q  122 aactc 126  Q
    |||||    
T  45097831 aactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 38882805 - 38882913
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtggga---tccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgt 116  Q
    |||||||||||||| ||||||| |||    |||| ||||| ||||||||||||||| |||| |||||||||||| ||||||||||||||| |||| ||||    
T  38882805 gaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgt 38882903  T
Q  117 atcataactc 126  Q
    ||||| ||||    
T  38882904 atcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 43490225 - 43490119
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||| ||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||| ||||||||| |||  |||||||||    
T  43490225 aaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcat 43490126  T
Q  122 aactcat 128  Q
    |||||||    
T  43490125 aactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 33436280 - 33436211
Alignment:
Q  57 cacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||| ||||||||| ||||    
T  33436280 cacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 2997483 - 2997567
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| ||||||||||||||||||||    
T  2997483 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 26891500 - 26891604
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||||||||  | | |||| |||||||| |||||||||||| ||||  |||| | |||||||||||||||||||| || | |||||||||    
T  26891500 aaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcat 26891599  T
Q  122 aactc 126  Q
    |||||    
T  26891600 aactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 38732458 - 38732354
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| ||||||| |||||||||||| ||||  |||||| || ||||||| ||| ||||| |||  |||||||||    
T  38732458 aaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcat 38732359  T
Q  122 aactc 126  Q
    |||||    
T  38732358 aactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 3154247 - 3154197
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagattttt 72  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||||||||||    
T  3154247 aaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagattttt 3154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 15428770 - 15428840
Alignment:
Q  56 ccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||| |||||||||||| ||||| ||| || |||||||| ||||| |||||||||  ||||||||||||||    
T  15428770 ccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 3440097 - 3439985
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| |||||||||| ||| |||| || | ||| ||| |||||||| ||||  |||| | | ||||||||||||||||||     
T  3440097 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaaggg 3439998  T
Q  108 tgtccatgtatca 120  Q
    |||| | ||||||    
T  3439997 tgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 13365457 - 13365373
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    ||||||||||||| |||||| ||| ||||| ||  ||| |||||||||||| ||||  |||||| |||| |||||||| ||||||    
T  13365457 aaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 31976366 - 31976248
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||  ||| ||||||| ||||||||||||||||    
T  31976366 gagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagga 31976267  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  31976266 tgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 32869796 - 32869669
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||     
T  32869796 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 32869697  T
Q  108 tgtccatgtatcataactcataataaaa 135  Q
    |||| ||||||| | |||||||| ||||    
T  32869696 tgtctatgtatctttactcataaaaaaa 32869669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 22880640 - 22880753
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| |||||||||| |||| ||||  |||||||||||||||||||||||||||     
T  22880640 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaaggg 22880739  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  22880740 tgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 17598672 - 17598552
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||| | |||||||||||||||||     
T  17598672 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaaggg 17598573  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  17598572 tgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 31110755 - 31110859
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||||||||||  || ||||||||   |||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||    
T  31110755 gaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagattttt--gtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatc 31110852  T
Q  120 ataactc 126  Q
    |||||||    
T  31110853 ataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 11427736 - 11427639
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaag 105  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  ||||||||| ||||||||||||||||    
T  11427736 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaag 11427639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 6209447 - 6209565
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||| ||| ||| |||| ||||| ||||| ||||||||| ||||| |||||||  ||||||||||||||||||     
T  6209447 gagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaaggg 6209546  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  6209547 tgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 31953026 - 31953132
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||| ||||||| | ||||  ||| ||| |||||||||||||||||  |||||| ||||||||||||||||||||||||| || ||||||    
T  31953026 aaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcat 31953125  T
Q  122 aactcat 128  Q
     ||||||    
T  31953126 tactcat 31953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 15508020 - 15508125
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  15508020 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15508119  T
Q  122 aactca 127  Q
    ||||||    
T  15508120 aactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 15990038 - 15990142
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  15990038 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15990137  T
Q  122 aactc 126  Q
    |||||    
T  15990138 aactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 23128112 - 23128196
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtatt 95  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||| ||||||    
T  23128112 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 30341356 - 30341460
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  30341356 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 30341455  T
Q  122 aactc 126  Q
    |||||    
T  30341456 aactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 31109385 - 31109485
Alignment:
Q  11 aagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgt 110  Q
    |||| ||| ||||||||||||||| ||| || ||| || | ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||    
T  31109385 aagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T
Q  111 c 111  Q
    |    
T  31109485 c 31109485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 4231652 - 4231547
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || ||||||||||||||||| ||||  || ||| |||||||||||||||||| |||||  ||| |||||    
T  4231652 aaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcat 4231553  T
Q  122 aactca 127  Q
    ||||||    
T  4231552 aactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 28536483 - 28536581
Alignment:
Q  21 aaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatca 120  Q
    ||||||||||||||||||||||||| ||||  |||||  ||||||||||||| ||||  |||||| || |||||||||||||||||||||  ||||||||    
T  28536483 aaaagagaaagtgtgcttgtgtggggtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatca 28536580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 29857933 - 29857827
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||||||| || |||||||| || || ||||||||||||||| ||||  ||| ||| |||||||||||| |||| | |||| |||||||    
T  29857933 gaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatc 29857834  T
Q  120 ataactc 126  Q
    || ||||    
T  29857833 attactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 946494 - 946383
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||| | | |||||  | ||||| | |||||||||||||  ||   ||||||||||||||||  ||||||||||    
T  946494 gagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaagga 946395  T
Q  108 tgtccatgtatc 119  Q
    |||| |||||||    
T  946394 tgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 9379708 - 9379808
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||| ||||||| ||||||  || |||||||||| |||||| | ||  |||||| || ||||||| || ||||||||||| |||||||||    
T  9379708 aaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T
Q  122 a 122  Q
    |    
T  9379808 a 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 12732586 - 12732482
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| ||||||| |||||||||||  |  ||||||||||||||||| ||||  |||||| |  | ||||||||| |||| ||||| |||||||||    
T  12732586 aaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcat 12732487  T
Q  122 aactc 126  Q
     ||||    
T  12732486 tactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 30870132 - 30870066
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttat 74  Q
    ||||||| ||| | ||||||||| |||||||||| ||| ||||||||||||| ||| ||||||||||    
T  30870132 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttat 30870066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 3434675 - 3434562
Alignment:
Q  13 gaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtcc 112  Q
    |||||| |||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||     
T  3434675 gaagagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtct 3434576  T
Q  113 atgtatcataactc 126  Q
    ||||||||| ||||    
T  3434575 atgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 35522994 - 35522877
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||  ||| ||| ||||||||||||| ||||||    
T  35522994 gagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagga 35522895  T
Q  108 tgtccatgtatcataact 125  Q
    |||| |||||||||||||    
T  35522894 tgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 8080365 - 8080483
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||     
T  8080365 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaaggg 8080464  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  8080465 tgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 19329960 - 19329840
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||  ||||||||||||||| ||||  ||||||| ||||||||||||||||||||    
T  19329960 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagga 19329861  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  19329860 tgtctatgtatcattactcat 19329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 36361907 - 36362013
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||  ||||||||| ||||||||||||||||| |||| |||||||    
T  36361907 gaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatc 36362006  T
Q  120 ataactc 126  Q
    || ||||    
T  36362007 attactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 3784113 - 3784000
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||  ||||||| | |||||||||||||||||     
T  3784113 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaaggg 3784014  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  3784013 tgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 38267158 - 38267039
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  ||||||||||||||||| ||| |||||     
T  38267158 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataaggg 38267059  T
Q  108 tgtccatgtatcataactca 127  Q
    |||| ||||||||| |||||    
T  38267058 tgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 7389495 - 7389389
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||  |||||||| |||||||||||||||||| |||| |||||||    
T  7389495 gaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatc 7389396  T
Q  120 ataactc 126  Q
    || ||||    
T  7389395 attactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 19436181 - 19436287
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||||||| || |||||||| ||||| ||||||||||||||| ||||  ||||||| ||||||||| |||||||||||||| |||||||    
T  19436181 gaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatc 19436280  T
Q  120 ataactc 126  Q
    || ||||    
T  19436281 attactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 26296762 - 26296644
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||| || ||||||| ||| ||||| || |||||| ||||||||||||||| |||| ||||||| ||||| ||||||||||    
T  26296762 gagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaagga 26296663  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  26296662 tgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 36362132 - 36362026
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||  ||||||||| |||||| |||||||||| |||| |||||||    
T  36362132 gaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatc 36362033  T
Q  120 ataactc 126  Q
    || ||||    
T  36362032 attactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 46033783 - 46033901
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| ||||||||||| | |||||||| ||  | |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||| |    
T  46033783 gagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaa 46033882  T
Q  108 tgtccatgtatcataactc 126  Q
    | || ||||||||||||||    
T  46033883 tatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 21234504 - 21234399
Alignment:
Q  23 aagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcata 122  Q
    |||||||| |||||||||| ||| | |||||| | |||||||| |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  123 actcat 128  Q
    ||||||    
T  21234404 actcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 35137651 - 35137531
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| ||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||     
T  35137651 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 35137552  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| || |||||| ||||||    
T  35137551 tgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 38837335 - 38837217
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| |||   |||  ||||||||||||||||||||||     
T  38837335 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaaggg 38837236  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  38837235 tgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 40957825 - 40957707
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||||  | |||||| |||||||||||||||||      
T  40957825 gagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagag 40957726  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  40957725 tgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  32 tgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||||||||| ||| |||||||| ||||||||||||||||| ||||  ||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 7728006 - 7727906
Alignment:
Q  26 agaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataact 125  Q
    ||||||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||  |||||||| |||||||||| |||  |||||||||||||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataact 7727907  T
Q  126 c 126  Q
    |    
T  7727906 c 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 31735995 - 31735882
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||       ||| ||||  ||| |||| |||||||||||||||||||    
T  31735995 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaagga 31735903  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||||||||||    
T  31735902 tgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 8238317 - 8238201
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccaccta-aggatgtccatgtatca 120  Q
    ||||||||||||| |||||| ||| ||||| |||| || |||||||||||| ||||  |||||||||||||||||||||||| ||| |||  ||||||||    
T  8238317 aaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatca 8238218  T
Q  121 taactcataataaaaat 137  Q
    ||||||||  |||||||    
T  8238217 taactcattttaaaaat 8238201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 38044301 - 38044197
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || | || |||||||||||| |||| ||||||| |||||||||||||||||||| |||  |||||||||    
T  38044301 aaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T
Q  122 aactc 126  Q
    |||||    
T  38044201 aactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 3694485 - 3694387
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||  |||| ||||||||||||||| ||||  ||| ||| ||||||||| |||||||||    
T  3694485 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagg 3694387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 4999496 - 4999614
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| |||  ||||||||||||||| ||||| ||| |||| ||||| |||| |||||||||| ||||  ||||||| |||||||||||| ||||||     
T  4999496 gagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaaggg 4999595  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||| ||||    
T  4999596 tgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 32951475 - 32951588
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||| ||| |||| ||||| |||||| |||||||| |||| |||| ||||| ||||||| || |||||      
T  32951475 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagag 32951574  T
Q  108 tgtccatgtatcat 121  Q
    |||| |||||||||    
T  32951575 tgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 18207283 - 18207180
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||||||||||||| | || ||| |||||||| |||||||| | ||  ||||||  ||||||||||||||||||| |||| |||||||||    
T  18207283 aaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcat 18207185  T
Q  122 aactc 126  Q
    |||||    
T  18207184 aactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 22343465 - 22343361
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| ||  ||| |||||||||||| ||||  |||||| |||||||||||||||||||| |||  |||||||||    
T  22343465 aaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 22343366  T
Q  122 aactc 126  Q
    |||||    
T  22343365 aactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 40846109 - 40846213
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||  ||||| ||| ||||| | || || ||| |||||||| |||| ||||||| ||||||||||||||||||||||||  |||||||||    
T  40846109 aaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcat 40846208  T
Q  122 aactc 126  Q
    |||||    
T  40846209 aactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 41915845 - 41915741
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||| || |||| |||||||||||| |||   |||||| |||||||||||||||||||| |||  |||||||||    
T  41915845 aaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 41915746  T
Q  122 aactc 126  Q
    |||||    
T  41915745 aactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 16374820 - 16374894
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattg 96  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||| || |||||||    
T  16374820 aaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 32564422 - 32564527
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    |||||||||||||  ||||| ||| ||||| |  |||| |||||||||||| ||||  |||||| ||||||||||||||||||| ||||  |||||||||    
T  32564422 aaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcat 32564521  T
Q  122 aactca 127  Q
    ||||||    
T  32564522 aactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 39255920 - 39256024
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||||| |||||||||  |||| ||| ||||||||||||||||| | ||  | ||||  ||||||||||||||||||| |||| |||||||||    
T  39255920 aaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcat 39256018  T
Q  122 aactca 127  Q
    ||||||    
T  39256019 aactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 36208291 - 36208173
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | ||||||||| ||||||||||  || |||| |||||||| |||||| ||||| ||||  |||||| |  |||||| ||||||||||     
T  36208291 gagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaaggg 36208192  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  36208191 tgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 41423786 - 41423681
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| | |||||||  |||||| | |||||||| |||||||||||| ||| | ||||||  |||||||| ||| |||| |||||| |||||||||    
T  41423786 aaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcat 41423687  T
Q  122 aactca 127  Q
    ||||||    
T  41423686 aactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 35468894 - 35468955
Alignment:
Q  65 agatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    |||||||||||||  ||||||| | |||||||||| ||||||||||| ||||||||| ||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 2318239 - 2318338
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||||| ||||| ||| || |||| ||||||||  ||||||||||| ||||  ||||||  ||||| |||||||||| || |||  |||||||||    
T  2318239 aaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 11044234 - 11044188
Alignment:
Q  80 tgtcaaagggtgtattgccacctaaggatgtccatgtatcataactc 126  Q
    ||||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  11044234 tgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 27744307 - 27744375
Alignment:
Q  24 agagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgt 92  Q
    ||||||| ||||||| || |||||||| ||| |||| |||||||||||| ||||  | |||||||||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 10091 - 10209
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| |||||||||||||||||||||  | | |||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |     
T  10091 gagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaagg 10190  T
Q  108 tgtccatgtatcataactc 126  Q
    |||| ||||||||||||||    
T  10191 tgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 911 - 1031
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||| ||||| || ||||| ||||||||| ||||| |||| |||| ||||||||||||||||||||| ||    
T  911 gagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaaga 1010  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  1011 tgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 911 - 1031
Alignment:
Q  8 gagaagaagagggaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagga 107  Q
    ||||||| ||| | |||||||||||||||||||| ||||| || ||||| ||||||||| ||||| |||| |||| ||||||||||||||||||||| ||    
T  911 gagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaaga 1010  T
Q  108 tgtccatgtatcataactcat 128  Q
    |||| ||||||||| ||||||    
T  1011 tgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 4135 - 4029
Alignment:
Q  20 gaaaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatc 119  Q
    ||||||||||||||||||| || |||||||| || || ||||||||||||||| ||||  ||| ||| |||||||||||| |||| | |||| |||||||    
T  4135 gaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatc 4036  T
Q  120 ataactc 126  Q
    || ||||    
T  4035 attactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 17158 - 17049
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| |||||||||| ||| ||||||||||||| |||||||||||| |||| ||||| | || |||||||| ||||    ||||| ||| |||||    
T  17158 aaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaacct----atgtctatgaatcat 17063  T
Q  122 aactcataataaaa 135  Q
    ||||||||| ||||    
T  17062 aactcataaaaaaa 17049  T

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Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 152602 - 152518
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaagg 106  Q
    |||||||||||||  ||||| ||||||||| ||||||| |||||||||||| ||||  |||||| ||||||||||||||| ||||    
T  152602 aaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 8859 - 8964
Alignment:
Q  22 aaagagaaagtgtgcttgtgtgggatccatgtgaccacgtgtcagatttttatgtgaatgtcaaagggtgtattgccacctaaggatgtccatgtatcat 121  Q
    ||||||||| ||| |||||||||| |||| ||||| | |||||| |||||| |||  ||||||||  |||||||| ||| |||||||||| || ||||||    
T  8859 aaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcat 8958  T
Q  122 aactca 127  Q
    ||||||    
T  8959 aactca 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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